AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179130 MtrunA17_Chr8g0343031 98.035 865 17 0 1 865 1 865 0.0 1750
Msa1179130 MtrunA17_Chr8g0343021 91.908 865 69 1 1 865 1 864 0.0 1660
Msa1179130 MtrunA17_Chr5g0406871 85.698 867 122 2 1 865 1 867 0.0 1554
Msa1179130 MtrunA17_Chr2g0329901 74.078 868 209 7 3 865 7 863 0.0 1319
Msa1179130 MtrunA17_Chr2g0329911 71.908 865 231 4 3 865 7 861 0.0 1288
Msa1179130 MtrunA17_Chr8g0342881 70.862 858 237 5 11 865 9 856 0.0 1266
Msa1179130 MtrunA17_Chr3g0120071 68.239 869 261 8 1 865 1 858 0.0 1212
Msa1179130 MtrunA17_Chr8g0342971 64.937 867 294 8 5 865 8 870 0.0 1176
Msa1179130 MtrunA17_Chr8g0342951 65.899 868 282 6 5 865 8 868 0.0 1172
Msa1179130 MtrunA17_Chr8g0342921 63.825 868 307 6 2 865 5 869 0.0 1161
Msa1179130 MtrunA17_Chr8g0344211 64.236 864 303 5 5 865 8 868 0.0 1158
Msa1179130 MtrunA17_Chr8g0342891 62.946 869 310 7 1 865 1 861 0.0 1156
Msa1179130 MtrunA17_Chr8g0343011 64.434 866 298 5 3 865 7 865 0.0 1152
Msa1179130 MtrunA17_Chr8g0342931 65.779 751 253 4 118 865 1 750 0.0 1058
Msa1179130 MtrunA17_Chr8g0342901 58.190 873 312 12 1 865 1 828 0.0 1031
Msa1179130 MtrunA17_Chr1g0191921 59.217 868 316 9 10 865 17 858 0.0 1026
Msa1179130 MtrunA17_Chr7g0272791 57.289 878 332 12 6 865 15 867 0.0 1001
Msa1179130 MtrunA17_Chr1g0205611 56.150 878 341 10 7 865 4 856 0.0 993
Msa1179130 MtrunA17_Chr8g0343001 55.671 864 317 13 7 865 5 807 0.0 942
Msa1179130 MtrunA17_Chr8g0342991 55.543 866 315 14 7 865 5 807 0.0 937
Msa1179130 MtrunA17_Chr8g0342981 55.786 821 312 14 64 865 35 823 0.0 885
Msa1179130 MtrunA17_Chr8g0344201 46.959 822 415 12 56 864 113 926 0.0 739
Msa1179130 MtrunA17_Chr8g0377101 45.189 821 419 15 63 865 109 916 0.0 685
Msa1179130 MtrunA17_Chr3g0118651 42.331 841 443 14 41 865 89 903 0.0 676
Msa1179130 MtrunA17_Chr3g0118641 41.509 848 451 15 36 865 82 902 0.0 652
Msa1179130 MtrunA17_Chr8g0338451 43.118 821 420 18 55 846 46 848 0.0 651
Msa1179130 MtrunA17_Chr4g0033171 47.109 709 359 10 167 865 23 725 0.0 637
Msa1179130 MtrunA17_Chr4g0047281 39.841 881 477 15 1 864 50 894 0.0 633
Msa1179130 MtrunA17_Chr3g0118621 41.947 832 460 12 46 865 45 865 0.0 618
Msa1179130 MtrunA17_Chr8g0344241 65.261 403 138 2 464 865 60 461 0.0 556
Msa1179130 MtrunA17_Chr8g0344241 45.570 79 38 3 282 358 1 76 1.22e-11 68.2
Msa1179130 MtrunA17_Chr6g0471951 41.860 516 252 8 321 830 11 484 5.83e-136 414
Msa1179130 MtrunA17_Chr7g0218231 56.452 124 53 1 513 635 9 132 1.64e-40 145
Msa1179130 MtrunA17_Chr6g0468081 53.933 89 40 1 548 635 1 89 1.78e-24 98.6
Msa1179130 MtrunA17_Chr3g0137991 40.476 126 56 3 742 865 1 109 2.05e-19 84.3
Msa1179130 MtrunA17_Chr2g0277191 53.571 56 26 0 739 794 58 113 6.51e-16 74.7
Msa1179130 MtrunA17_Chr7g0272781 50.000 62 31 0 758 819 8 69 6.66e-16 73.9
Msa1179130 MtrunA17_Chr4g0047271 42.857 91 51 1 775 864 1 91 1.21e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179130 AT1G55020.1 57.586 870 326 11 10 865 19 859 0.0 1003
Msa1179130 AT3G22400.1 53.645 878 359 11 11 865 34 886 0.0 952
Msa1179130 AT1G72520.1 46.107 822 422 11 56 865 114 926 0.0 724
Msa1179130 AT1G17420.1 45.956 816 417 13 63 865 115 919 0.0 713
Msa1179130 AT3G45140.1 44.080 853 435 19 29 865 70 896 0.0 674
Msa1179130 AT3G45140.2 46.536 765 379 15 117 865 4 754 0.0 662
Msa1179130 AT1G67560.1 44.121 825 421 15 63 865 111 917 0.0 654

Find 223 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAATATGATGCTAATTT+TGG 0.100125 8_1:+12335224 Msa1179130:CDS
TGATGCATTCATGCCATATT+TGG 0.131415 8_1:+12336819 Msa1179130:CDS
TCTTCTCTATAATGATTTAA+TGG 0.176573 8_1:-12335635 None:intergenic
CGGTGCGAAAGATTTCTTTA+AGG 0.184089 8_1:-12336195 None:intergenic
TCTTGAAGTGTTTGCATCTT+AGG 0.189058 8_1:-12337768 None:intergenic
GGAAATAAAAGTTTATTAAT+TGG 0.191745 8_1:-12337238 None:intergenic
GAAGAAATCTCGACTGAATT+TGG 0.217122 8_1:-12337352 None:intergenic
GTTCCAAGAGATGAAAATTT+TGG 0.231662 8_1:+12335974 Msa1179130:CDS
ATAATTTGCTTCCAAACTTT+TGG 0.232757 8_1:-12338115 None:intergenic
ATGTTTATCCTCTCCAAATA+TGG 0.242340 8_1:-12336832 None:intergenic
TTACGGGGTTCTTAGTTAAT+AGG 0.246915 8_1:+12338521 Msa1179130:three_prime_UTR
TTCACCATCTCATCATATTC+TGG 0.266521 8_1:-12337930 None:intergenic
GTGTGTACTACTATTGTATT+TGG 0.276639 8_1:+12338403 Msa1179130:three_prime_UTR
TATTAGGCAAGTTTACTAAA+TGG 0.281228 8_1:+12338738 Msa1179130:three_prime_UTR
AGAAATATGGGATGCTATTA+AGG 0.290191 8_1:+12337614 Msa1179130:CDS
CTTTGCTTTCAGAACCATAT+TGG 0.292374 8_1:-12336957 None:intergenic
CTGTTGATGGACTAGAAATA+TGG 0.297323 8_1:+12337601 Msa1179130:CDS
CTTCAATAGTTTACAAGGAT+TGG 0.300764 8_1:+12337371 Msa1179130:CDS
TCGATGTACATCGATGTTAT+TGG 0.305188 8_1:-12338339 None:intergenic
CACTTGTCCGACCAGTCCTT+GGG 0.305880 8_1:+12335765 Msa1179130:CDS
CACTCAAATGGGGTCCAATA+TGG 0.309094 8_1:+12336943 Msa1179130:CDS
TTATGATGTTTATAATGATT+TGG 0.319374 8_1:+12335721 Msa1179130:CDS
AAACTTAATTCAATTGCTAT+TGG 0.320767 8_1:-12336916 None:intergenic
TATGATGTTTATAATGATTT+GGG 0.329706 8_1:+12335722 Msa1179130:CDS
TTCAGTTTATTTGTAACTCA+TGG 0.332336 8_1:+12335339 Msa1179130:CDS
GAGCAGATGTATAATCTATT+AGG 0.334742 8_1:+12338722 Msa1179130:three_prime_UTR
AACTTTGGACAATATCCTTA+TGG 0.337509 8_1:+12337849 Msa1179130:CDS
TTCATCTGTTGGATAATATA+AGG 0.339432 8_1:-12337658 None:intergenic
GAGAGAGGAATGACAAGTTT+TGG 0.340286 8_1:+12338063 Msa1179130:CDS
AAATCTAAAGCTTACATCAT+TGG 0.341756 8_1:-12335405 None:intergenic
TCATCATATTCTGGAGTTCC+TGG 0.344684 8_1:-12337921 None:intergenic
TACTAAGAGTTGGACGGTTC+AGG 0.345866 8_1:-12337881 None:intergenic
GTACAGGCCTTCCAAAAGTT+TGG 0.353077 8_1:+12338104 Msa1179130:CDS
CTTCCTCAGTTACCAACTTT+GGG 0.357245 8_1:+12335173 Msa1179130:CDS
GAAATAAAAGTTTATTAATT+GGG 0.359057 8_1:-12337237 None:intergenic
TTCAATTGCTATTGGTTTCA+AGG 0.361603 8_1:-12336908 None:intergenic
CTAGGACATTAGATTCTTAC+GGG 0.361718 8_1:+12338505 Msa1179130:three_prime_UTR
TGGATGACTGATGAAGAATT+TGG 0.366017 8_1:+12336406 Msa1179130:CDS
GGTGCGAAAGATTTCTTTAA+GGG 0.366175 8_1:-12336194 None:intergenic
GACTCCTCCGATGATATTTC+CGG 0.366190 8_1:-12334653 None:intergenic
TTCAATAGTTTACAAGGATT+GGG 0.366856 8_1:+12337372 Msa1179130:CDS
TGAAGAAGGCGAATCACATT+AGG 0.368002 8_1:-12336454 None:intergenic
TGAAAGTACAATTTGGCTAT+TGG 0.371059 8_1:+12337005 Msa1179130:CDS
ACACCCGGTTTCTCACTCTT+AGG 0.374698 8_1:-12335944 None:intergenic
GACACTGCCACTGCTTTCTT+AGG 0.376400 8_1:+12334700 Msa1179130:CDS
ACACTAGATACCACTGTCTA+TGG 0.377248 8_1:+12336597 Msa1179130:CDS
TCTTCCTCAGTTACCAACTT+TGG 0.377861 8_1:+12335172 Msa1179130:CDS
ATAATGATGTGTTTGTTGAT+AGG 0.378144 8_1:+12338442 Msa1179130:three_prime_UTR
CATTCATCATAGCAACAAAT+AGG 0.378633 8_1:+12337197 Msa1179130:CDS
TCAATAAGCGTCTGAAACTT+TGG 0.379241 8_1:-12337987 None:intergenic
AATCTTGCTCCATTATCATA+TGG 0.381472 8_1:+12337799 Msa1179130:CDS
GCACTTGTCCGACCAGTCCT+TGG 0.386013 8_1:+12335764 Msa1179130:CDS
GCCTTTACCGACGGACGTTA+TGG 0.397612 8_1:-12334614 None:intergenic
ATCTTGTTCTTGAAAGATGA+TGG 0.398972 8_1:+12336883 Msa1179130:CDS
TAAGTTTGCCACACTCAAAT+GGG 0.403015 8_1:+12336932 Msa1179130:CDS
TCTAGTCCATCAACAGCATA+AGG 0.405604 8_1:-12337594 None:intergenic
CTTCATGCAGCAGTTAACTT+TGG 0.412421 8_1:+12337834 Msa1179130:CDS
GACTACCCTTATGCTGTTGA+TGG 0.413184 8_1:+12337588 Msa1179130:CDS
CTCCTTCGTTCAAGTGAAGA+AGG 0.413433 8_1:+12338224 Msa1179130:CDS
AAAGAGTAAGCAAAGATGTT+TGG 0.416069 8_1:+12334517 Msa1179130:exon
GATTTCTTTAAGGGCTGGTA+AGG 0.418543 8_1:-12336185 None:intergenic
TCGAAGCTATCGAACTCATT+TGG 0.420932 8_1:-12336097 None:intergenic
TCTTAGTAGGAGATTCATTC+CGG 0.421576 8_1:+12337896 Msa1179130:CDS
TCTAGGACATTAGATTCTTA+CGG 0.423762 8_1:+12338504 Msa1179130:three_prime_UTR
AAGGTGTTGAAAGTACAATT+TGG 0.426026 8_1:+12336998 Msa1179130:CDS
CTATTTGTTGCTATGATGAA+TGG 0.428310 8_1:-12337196 None:intergenic
TCATCTGACTTCCTTATGTA+TGG 0.429559 8_1:+12336007 Msa1179130:CDS
TTAAGTTTGCCACACTCAAA+TGG 0.432308 8_1:+12336931 Msa1179130:CDS
AGATCCTAAGAGTGAGAAAC+CGG 0.434252 8_1:+12335940 Msa1179130:intron
ATCTCGACTGAATTTGGTCC+TGG 0.440986 8_1:-12337346 None:intergenic
ATGAACTTGATGATTAATCT+AGG 0.443263 8_1:+12338487 Msa1179130:three_prime_UTR
CTTTCAACACCTTGGTCAGC+AGG 0.446383 8_1:-12336988 None:intergenic
CAAGAACAAGATTGTTCTTG+TGG 0.446508 8_1:-12336872 None:intergenic
GGAGGAGTCACCGGCATTGT+TGG 0.446572 8_1:+12334667 Msa1179130:CDS
TTCTAAATAGAGATACTGTT+GGG 0.452292 8_1:-12338266 None:intergenic
ACTCATTTGGTGTGAAATTG+AGG 0.457560 8_1:-12336084 None:intergenic
ACAAGTGCGTCACCACCATC+TGG 0.458687 8_1:-12335749 None:intergenic
TGTGTACTACTATTGTATTT+GGG 0.461884 8_1:+12338404 Msa1179130:three_prime_UTR
AACTGAACCGATTCACGGTT+AGG 0.465549 8_1:-12335323 None:intergenic
AAATAAACTGAACCGATTCA+CGG 0.466221 8_1:-12335328 None:intergenic
GCAAATGGAAAGGGTCTAGT+TGG 0.468531 8_1:+12335125 Msa1179130:intron
GATTTCTTCAATAGTTTACA+AGG 0.470122 8_1:+12337366 Msa1179130:CDS
GTGGAAGGAAGCTGTAGAAA+AGG 0.470508 8_1:+12337713 Msa1179130:CDS
TTTGGAAGAGAGATGGTTGC+TGG 0.470580 8_1:+12336424 Msa1179130:CDS
CTATAATGATTTAATGGAGC+CGG 0.470903 8_1:-12335629 None:intergenic
TAATGATGTGTTTGTTGATA+GGG 0.471909 8_1:+12338443 Msa1179130:three_prime_UTR
AAAGTGTAGGGCAATTCAAC+TGG 0.475433 8_1:-12338200 None:intergenic
AACTGGAGAGCGCAAAGAAT+CGG 0.475822 8_1:+12335685 Msa1179130:CDS
ATTTGGTACTTACTTGAAGA+AGG 0.476670 8_1:-12336468 None:intergenic
CGGCATTGTTGGCGGAGTTG+TGG 0.476699 8_1:+12334678 Msa1179130:CDS
TCTTGTCTTGCTCCCAAAGT+TGG 0.477942 8_1:-12335185 None:intergenic
ATCGGATACAAGGGCAGTAC+AGG 0.479432 8_1:+12338088 Msa1179130:CDS
TCAGTTTATTTGTAACTCAT+GGG 0.479467 8_1:+12335340 Msa1179130:CDS
CGAAAGATTTCTTTAAGGGC+TGG 0.479618 8_1:-12336190 None:intergenic
GAAGAGTTGCAGACTCTAAG+AGG 0.481668 8_1:+12335656 Msa1179130:CDS
ACTCTAAGAGGAGATGGAAC+TGG 0.481698 8_1:+12335668 Msa1179130:CDS
AATATAAGAACAAAATGATT+CGG 0.484898 8_1:+12338596 Msa1179130:three_prime_UTR
CACAACTCCGCCAACAATGC+CGG 0.487713 8_1:-12334677 None:intergenic
TGAAGCAGTCCATATGATAA+TGG 0.491962 8_1:-12337808 None:intergenic
GGTAGAAAACCAACCAGAAA+AGG 0.492100 8_1:+12335827 Msa1179130:CDS
AATATCATCGGAGGAGTCAC+CGG 0.493995 8_1:+12334658 Msa1179130:CDS
TTTCTTATGTAAAATGCTCC+AGG 0.494462 8_1:-12335251 None:intergenic
TGAACCGTCCAACTCTTAGT+AGG 0.494999 8_1:+12337883 Msa1179130:CDS
AACAGATGAAGTAGTGCAAA+AGG 0.496776 8_1:+12337671 Msa1179130:CDS
TACCTCTTGATAAGATCAGC+TGG 0.498386 8_1:-12337415 None:intergenic
CGTGATACAATAAATATCAA+TGG 0.500728 8_1:+12337268 Msa1179130:CDS
AAATTGAAGGGAAAATCAAC+GGG 0.501920 8_1:+12338141 Msa1179130:CDS
TTGCAGACTCTAAGAGGAGA+TGG 0.503523 8_1:+12335662 Msa1179130:CDS
TACAATTTGGCTATTGGCAA+AGG 0.505352 8_1:+12337011 Msa1179130:CDS
AGCAAATTATCTGAAATTGA+AGG 0.506290 8_1:+12338128 Msa1179130:CDS
AGGAGATTCATTCCGGAGCC+AGG 0.506885 8_1:+12337903 Msa1179130:CDS
CTTCTAACCCTGCGAGGGTA+GGG 0.508695 8_1:-12335803 None:intergenic
TTTATTGTATCACGGAAATG+AGG 0.512453 8_1:-12337259 None:intergenic
CATTGATATTTATTGTATCA+CGG 0.514036 8_1:-12337267 None:intergenic
ATCATCAACTCATGAGCCAT+TGG 0.514587 8_1:+12337061 Msa1179130:CDS
TTTCTAAATAGAGATACTGT+TGG 0.515169 8_1:-12338267 None:intergenic
AACCTTCTTCACTTGAACGA+AGG 0.515488 8_1:-12338226 None:intergenic
GATGGTGAAAAGTCCTCAAA+AGG 0.515594 8_1:+12337944 Msa1179130:CDS
TTCAGGATATATCCTCCATA+AGG 0.516837 8_1:-12337864 None:intergenic
AGATATTCCTAACCGTGAAT+CGG 0.517076 8_1:+12335316 Msa1179130:CDS
TAGTAGTAGAGAATGAAGCT+TGG 0.521145 8_1:-12334461 None:intergenic
GCACCTATCCCTACCCTCGC+AGG 0.525837 8_1:+12335795 Msa1179130:CDS
TATTCTGGAGTTCCTGGCTC+CGG 0.529104 8_1:-12337915 None:intergenic
CGACAATCTCTAATCAATGC+TGG 0.529247 8_1:+12337298 Msa1179130:CDS
TCAACTGCATAGAGACGTTA+CGG 0.536637 8_1:-12334723 None:intergenic
AATGGAGCCGGTGTTTGACT+TGG 0.537557 8_1:-12335617 None:intergenic
CTAGTCCATCAACAGCATAA+GGG 0.537700 8_1:-12337593 None:intergenic
GGAGTCACCGGCATTGTTGG+CGG 0.537869 8_1:+12334670 Msa1179130:CDS
ATGAATCTCCTACTAAGAGT+TGG 0.540036 8_1:-12337891 None:intergenic
AAAGAAATCTTTCGCACCGA+TGG 0.540424 8_1:+12336199 Msa1179130:CDS
GAGAGCGCAAAGAATCGGAT+AGG 0.541181 8_1:+12335690 Msa1179130:CDS
GATGCAAACACTTCAAGACT+TGG 0.544651 8_1:+12337773 Msa1179130:CDS
TGGAAATGAACTACTCTGCA+TGG 0.546870 8_1:+12338758 Msa1179130:three_prime_UTR
TAAGATCAGCTGGTAATGCT+TGG 0.548014 8_1:-12337405 None:intergenic
ATGCATCATGGTAATCTAAG+AGG 0.548431 8_1:-12336804 None:intergenic
GAAATTGAAGGGAAAATCAA+CGG 0.551567 8_1:+12338140 Msa1179130:CDS
CCTTTGATTACATGAGGTGG+TGG 0.551689 8_1:-12336241 None:intergenic
AATAACACCGCCTTTACCGA+CGG 0.552475 8_1:-12334623 None:intergenic
TGGAAAGGGTCTAGTTGGAA+AGG 0.553743 8_1:+12335130 Msa1179130:CDS
TGTTGATGGACTAGAAATAT+GGG 0.555002 8_1:+12337602 Msa1179130:CDS
AACTCCAGAATATGATGAGA+TGG 0.555643 8_1:+12337926 Msa1179130:CDS
AAATTGTACTTTCAACACCT+TGG 0.556889 8_1:-12336996 None:intergenic
GCAAATTATCTGAAATTGAA+GGG 0.559063 8_1:+12338129 Msa1179130:CDS
ACACTGAACTACAAACTTGG+TGG 0.561450 8_1:+12337694 Msa1179130:CDS
ACTTCTAACCCTGCGAGGGT+AGG 0.563371 8_1:-12335804 None:intergenic
AATATAAGGAGACATAGTCT+TGG 0.563958 8_1:-12337644 None:intergenic
TCTTGTTCTTGAAAGATGAT+GGG 0.563970 8_1:+12336884 Msa1179130:CDS
AGGACACTGAACTACAAACT+TGG 0.566561 8_1:+12337691 Msa1179130:CDS
ATGGGATGCTATTAAGGCAT+GGG 0.568340 8_1:+12337620 Msa1179130:CDS
CTTGAGGACTTGTTCACCAT+CGG 0.571669 8_1:-12336215 None:intergenic
ATTTCTTTAAGGGCTGGTAA+GGG 0.572647 8_1:-12336184 None:intergenic
ATCAGCTGGTAATGCTTGGT+CGG 0.572957 8_1:-12337401 None:intergenic
TAACACAAGACGAAGTCCAT+GGG 0.574013 8_1:-12337562 None:intergenic
CTTCAAGAGTCACACTAACA+AGG 0.574151 8_1:-12335295 None:intergenic
TGGAAGGAAGCTGTAGAAAA+GGG 0.576005 8_1:+12337714 Msa1179130:CDS
CTAACACAAGACGAAGTCCA+TGG 0.577343 8_1:-12337563 None:intergenic
TGAACGAAGGAGCAAAGTGT+AGG 0.579119 8_1:-12338213 None:intergenic
GAACGAAGGAGCAAAGTGTA+GGG 0.581719 8_1:-12338212 None:intergenic
GAGGATAAACATAAATGCAA+AGG 0.581824 8_1:+12336843 Msa1179130:CDS
ACTTGTCCGACCAGTCCTTG+GGG 0.585041 8_1:+12335766 Msa1179130:CDS
AAAATCACTGATTTAAACAA+AGG 0.585127 8_1:-12336058 None:intergenic
TGGTGAAATCACAGTAGAAG+AGG 0.586886 8_1:+12336665 Msa1179130:CDS
TATGGGATGCTATTAAGGCA+TGG 0.595717 8_1:+12337619 Msa1179130:CDS
CCACCACCTCATGTAATCAA+AGG 0.596584 8_1:+12336241 Msa1179130:CDS
GAGCAGTTAGCAAGTCTGCA+TGG 0.599984 8_1:+12336386 Msa1179130:intron
GGCGGTGTTATTGACACCGC+CGG 0.600528 8_1:+12334634 Msa1179130:CDS
CATTCATGCCATATTTGGAG+AGG 0.604180 8_1:+12336824 Msa1179130:CDS
ATTCAGGGGACTAGCTGTTG+AGG 0.605744 8_1:+12337527 Msa1179130:intron
AATATGGCATGAATGCATCA+TGG 0.606974 8_1:-12336816 None:intergenic
CTTGGAACATAAATCACACC+CGG 0.607189 8_1:-12335959 None:intergenic
CTTGTCCGACCAGTCCTTGG+GGG 0.607593 8_1:+12335767 Msa1179130:CDS
TACCACTTCTAACCCTGCGA+GGG 0.608273 8_1:-12335808 None:intergenic
ATGAGGTGTACCTCGGAGAG+AGG 0.610201 8_1:+12338048 Msa1179130:CDS
CATGAGGTGGTGGAAACTTG+AGG 0.611673 8_1:-12336231 None:intergenic
AATGATTTGGGAAATCCAGA+TGG 0.614572 8_1:+12335734 Msa1179130:CDS
CAGGTTAAATACTCATGCAG+TGG 0.615445 8_1:+12337168 Msa1179130:intron
ATAAGTGCTACTAAGACTGA+TGG 0.616988 8_1:+12334745 Msa1179130:CDS
GTTTGCATCTTAGGCCACCA+TGG 0.617328 8_1:-12337759 None:intergenic
TACCAGCTGATCTTATCAAG+AGG 0.619833 8_1:+12337413 Msa1179130:CDS
CACCTATCCCTACCCTCGCA+GGG 0.621451 8_1:+12335796 Msa1179130:CDS
GTTTGGCATCTTAAACAACA+AGG 0.623240 8_1:+12334534 Msa1179130:CDS
TGAAGAATTTGGAAGAGAGA+TGG 0.625232 8_1:+12336417 Msa1179130:CDS
GAACACTTAGAGACTAACCT+TGG 0.626961 8_1:+12336645 Msa1179130:CDS
GTATACTTGCCTGCTGACCA+AGG 0.627379 8_1:+12336979 Msa1179130:CDS
TGAACTACAAACTTGGTGGA+AGG 0.628885 8_1:+12337698 Msa1179130:CDS
TTTGGACAATATCCTTATGG+AGG 0.629254 8_1:+12337852 Msa1179130:CDS
AACCCTGCGAGGGTAGGGAT+AGG 0.629944 8_1:-12335798 None:intergenic
AGAGCGCAAAGAATCGGATA+GGG 0.630332 8_1:+12335691 Msa1179130:CDS
TTCAATGCCATAACGTCCGT+CGG 0.634724 8_1:+12334607 Msa1179130:CDS
GAGGTACCTTTGATTACATG+AGG 0.637794 8_1:-12336247 None:intergenic
GCTTCTGATGAGGTGTACCT+CGG 0.639827 8_1:+12338041 Msa1179130:CDS
GACACCGCCGGAAATATCAT+CGG 0.641337 8_1:+12334646 Msa1179130:CDS
ATTTGACTAAGTATATCTGT+AGG 0.643284 8_1:-12336157 None:intergenic
GCTCCCAAAGTTGGTAACTG+AGG 0.644714 8_1:-12335176 None:intergenic
TATTGGACCCCATTTGAGTG+TGG 0.645377 8_1:-12336940 None:intergenic
ATCTCCTACTAAGAGTTGGA+CGG 0.648849 8_1:-12337887 None:intergenic
AAGTTTGCCACACTCAAATG+GGG 0.650150 8_1:+12336933 Msa1179130:CDS
CTTCTACTGTGATTTCACCA+AGG 0.652721 8_1:-12336662 None:intergenic
ATAACGTCCGTCGGTAAAGG+CGG 0.654342 8_1:+12334616 Msa1179130:CDS
CATCATTGGTGAAGAAGATG+CGG 0.654380 8_1:-12335391 None:intergenic
GAAGCTGTAGAAAAGGGTCA+TGG 0.659592 8_1:+12337720 Msa1179130:CDS
TACCCTCGCAGGGTTAGAAG+TGG 0.659775 8_1:+12335806 Msa1179130:CDS
CTACCACTTCTAACCCTGCG+AGG 0.666085 8_1:-12335809 None:intergenic
CAATCTCTAATCAATGCTGG+TGG 0.670777 8_1:+12337301 Msa1179130:CDS
TTTGGCATCTTAAACAACAA+GGG 0.672959 8_1:+12334535 Msa1179130:CDS
AACACAAGACGAAGTCCATG+GGG 0.677428 8_1:-12337561 None:intergenic
GTATCTTCCAAGTCAAACAC+CGG 0.681822 8_1:+12335610 Msa1179130:CDS
TTGAAGGGAAAATCAACGGG+AGG 0.682959 8_1:+12338144 Msa1179130:CDS
GTACCTTTGATTACATGAGG+TGG 0.683223 8_1:-12336244 None:intergenic
TCCTCCGATGATATTTCCGG+CGG 0.686578 8_1:-12334650 None:intergenic
ACCGCCGGAAATATCATCGG+AGG 0.686952 8_1:+12334649 Msa1179130:CDS
ACTTGAAAGACAAGCCATGG+TGG 0.687448 8_1:+12337745 Msa1179130:CDS
GTCAAGACATGCTTCTGATG+AGG 0.689418 8_1:+12338031 Msa1179130:CDS
GTGACTTGAAAGACAAGCCA+TGG 0.691001 8_1:+12337742 Msa1179130:CDS
GATCCTAAGAGTGAGAAACC+GGG 0.695001 8_1:+12335941 Msa1179130:intron
CACAAGACGAAGTCCATGGG+GGG 0.702873 8_1:-12337559 None:intergenic
GTTACGGCCTAAGAAAGCAG+TGG 0.712363 8_1:-12334707 None:intergenic
GCAATTCAACTGGTCCAGTG+CGG 0.715428 8_1:-12338190 None:intergenic
ACTTGTCATTCCTCTCTCCG+AGG 0.722579 8_1:-12338058 None:intergenic
TAGGACATTAGATTCTTACG+GGG 0.723607 8_1:+12338506 Msa1179130:three_prime_UTR
GATTTGGGAAATCCAGATGG+TGG 0.729912 8_1:+12335737 Msa1179130:CDS
ACACAAGACGAAGTCCATGG+GGG 0.743636 8_1:-12337560 None:intergenic
AAATGAACTACTCTGCATGG+AGG 0.778096 8_1:+12338761 Msa1179130:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAATTATTACTAATTTTT+TGG - chr8_1:12334879-12334898 None:intergenic 10.0%
!! GATTATTAATATAAAAAATG+GGG + chr8_1:12337142-12337161 Msa1179130:intron 10.0%
!! GAAATAAAAGTTTATTAATT+GGG - chr8_1:12337240-12337259 None:intergenic 10.0%
!! TAGTGATTATGTTTAAATTA+TGG + chr8_1:12335083-12335102 Msa1179130:intron 15.0%
!! AGTGATTATGTTTAAATTAT+GGG + chr8_1:12335084-12335103 Msa1179130:intron 15.0%
!!! AAGCTTTAGATTTTAAATTA+AGG + chr8_1:12335415-12335434 Msa1179130:intron 15.0%
!! AAATATGTTTATATGATTGT+AGG + chr8_1:12335441-12335460 Msa1179130:intron 15.0%
!!! GAAATGTGTAATTTTTTTTT+AGG - chr8_1:12335493-12335512 None:intergenic 15.0%
!! TATTATGTGTAAATATCATT+AGG + chr8_1:12335544-12335563 Msa1179130:intron 15.0%
!! TTATGATGTTTATAATGATT+TGG + chr8_1:12335721-12335740 Msa1179130:CDS 15.0%
!! TATGATGTTTATAATGATTT+GGG + chr8_1:12335722-12335741 Msa1179130:CDS 15.0%
!!! TGTGATTGAAATTAAATTTT+TGG + chr8_1:12336753-12336772 Msa1179130:intron 15.0%
!! GGAAATAAAAGTTTATTAAT+TGG - chr8_1:12337241-12337260 None:intergenic 15.0%
!! AATATAAGAACAAAATGATT+CGG + chr8_1:12338596-12338615 Msa1179130:three_prime_UTR 15.0%
!!! TTGAAATCCAAAACATTTTT+GGG - chr8_1:12334592-12334611 None:intergenic 20.0%
!!! ATTGAAATCCAAAACATTTT+TGG - chr8_1:12334593-12334612 None:intergenic 20.0%
!! ATTGGTTAATAATTATGTCA+CGG - chr8_1:12334830-12334849 None:intergenic 20.0%
!! TGAAAAAATTATTCTTGACT+GGG - chr8_1:12334943-12334962 None:intergenic 20.0%
!!! TGATGTACTTAATTTCTTTT+TGG + chr8_1:12334993-12335012 Msa1179130:intron 20.0%
!! TAAACATAATCACTAGAAAA+GGG - chr8_1:12335078-12335097 None:intergenic 20.0%
!! TTAAACATAATCACTAGAAA+AGG - chr8_1:12335079-12335098 None:intergenic 20.0%
!!! GTTTTTAATTTTGTAGCAAA+TGG + chr8_1:12335110-12335129 Msa1179130:intron 20.0%
!!! TTTGAATATGATGCTAATTT+TGG + chr8_1:12335224-12335243 Msa1179130:CDS 20.0%
!! TCTTCTCTATAATGATTTAA+TGG - chr8_1:12335638-12335657 None:intergenic 20.0%
!!! AAAATCACTGATTTAAACAA+AGG - chr8_1:12336061-12336080 None:intergenic 20.0%
!! CATAGAAATATATAAGCATT+GGG - chr8_1:12336537-12336556 None:intergenic 20.0%
!! ATGTTCAAATTAAAAGTCAT+TGG + chr8_1:12336701-12336720 Msa1179130:intron 20.0%
!!! TGAAATTAAATTTTTGGAAC+AGG + chr8_1:12336759-12336778 Msa1179130:intron 20.0%
!! AAACTTAATTCAATTGCTAT+TGG - chr8_1:12336919-12336938 None:intergenic 20.0%
!! CATTGATATTTATTGTATCA+CGG - chr8_1:12337270-12337289 None:intergenic 20.0%
!! CTATATTCATTGAAATTAGA+TGG - chr8_1:12337461-12337480 None:intergenic 20.0%
!! AAAGAAAAAAAAAGTTTGTG+TGG + chr8_1:12338287-12338306 Msa1179130:three_prime_UTR 20.0%
! CTAGCTAGTATATTGAATAT+TGG - chr8_1:12334848-12334867 None:intergenic 25.0%
!! TTTTTGCATGATAGTATTCA+CGG - chr8_1:12334901-12334920 None:intergenic 25.0%
! GTGAAAAAATTATTCTTGAC+TGG - chr8_1:12334944-12334963 None:intergenic 25.0%
! ACTAATTGAAGAAAAACAAG+TGG + chr8_1:12334962-12334981 Msa1179130:intron 25.0%
!! TAATTTTGTAGCAAATGGAA+AGG + chr8_1:12335115-12335134 Msa1179130:intron 25.0%
!! AATTTTGTAGCAAATGGAAA+GGG + chr8_1:12335116-12335135 Msa1179130:intron 25.0%
! TTCAGTTTATTTGTAACTCA+TGG + chr8_1:12335339-12335358 Msa1179130:CDS 25.0%
! TCAGTTTATTTGTAACTCAT+GGG + chr8_1:12335340-12335359 Msa1179130:CDS 25.0%
!! AAATCTAAAGCTTACATCAT+TGG - chr8_1:12335408-12335427 None:intergenic 25.0%
!! ATTTAATGTGTCCATTTTGT+AGG + chr8_1:12335879-12335898 Msa1179130:intron 25.0%
!! GTGATTTTATTCCATACATA+AGG - chr8_1:12336021-12336040 None:intergenic 25.0%
! ATTTGACTAAGTATATCTGT+AGG - chr8_1:12336160-12336179 None:intergenic 25.0%
! TAGCTATAATTGAATCGATT+TGG - chr8_1:12336279-12336298 None:intergenic 25.0%
! GCTCAAAATAATTGTCAAAT+TGG - chr8_1:12336370-12336389 None:intergenic 25.0%
! GCATAGAAATATATAAGCAT+TGG - chr8_1:12336538-12336557 None:intergenic 25.0%
! CGTGATACAATAAATATCAA+TGG + chr8_1:12337268-12337287 Msa1179130:CDS 25.0%
! GATTTCTTCAATAGTTTACA+AGG + chr8_1:12337366-12337385 Msa1179130:CDS 25.0%
! TTCAATAGTTTACAAGGATT+GGG + chr8_1:12337372-12337391 Msa1179130:CDS 25.0%
! TTCATCTGTTGGATAATATA+AGG - chr8_1:12337661-12337680 None:intergenic 25.0%
!!! ATAATTTGCTTCCAAACTTT+TGG - chr8_1:12338118-12338137 None:intergenic 25.0%
!! AGCAAATTATCTGAAATTGA+AGG + chr8_1:12338128-12338147 Msa1179130:CDS 25.0%
!! GCAAATTATCTGAAATTGAA+GGG + chr8_1:12338129-12338148 Msa1179130:CDS 25.0%
! TTCTAAATAGAGATACTGTT+GGG - chr8_1:12338269-12338288 None:intergenic 25.0%
! TTTCTAAATAGAGATACTGT+TGG - chr8_1:12338270-12338289 None:intergenic 25.0%
! TGTGTACTACTATTGTATTT+GGG + chr8_1:12338404-12338423 Msa1179130:three_prime_UTR 25.0%
!! ATAATGATGTGTTTGTTGAT+AGG + chr8_1:12338442-12338461 Msa1179130:three_prime_UTR 25.0%
!! TAATGATGTGTTTGTTGATA+GGG + chr8_1:12338443-12338462 Msa1179130:three_prime_UTR 25.0%
!! ATGAACTTGATGATTAATCT+AGG + chr8_1:12338487-12338506 Msa1179130:three_prime_UTR 25.0%
! TATTAGGCAAGTTTACTAAA+TGG + chr8_1:12338738-12338757 Msa1179130:three_prime_UTR 25.0%
AAAGAGTAAGCAAAGATGTT+TGG + chr8_1:12334517-12334536 Msa1179130:exon 30.0%
TTTGGCATCTTAAACAACAA+GGG + chr8_1:12334535-12334554 Msa1179130:CDS 30.0%
TTTCTTATGTAAAATGCTCC+AGG - chr8_1:12335254-12335273 None:intergenic 30.0%
! AAATAAACTGAACCGATTCA+CGG - chr8_1:12335331-12335350 None:intergenic 30.0%
ATATGATTGTAGGAGAGTTT+AGG + chr8_1:12335451-12335470 Msa1179130:intron 30.0%
CTATAATGATTTAATGGAGC+CGG - chr8_1:12335632-12335651 None:intergenic 30.0%
TAAATTCACTAACCGCTATA+CGG - chr8_1:12335864-12335883 None:intergenic 30.0%
ATTAGAACGTTCCTACAAAA+TGG - chr8_1:12335893-12335912 None:intergenic 30.0%
! TTTTGTAGGAACGTTCTAAT+TGG + chr8_1:12335893-12335912 Msa1179130:intron 30.0%
! GTTCCAAGAGATGAAAATTT+TGG + chr8_1:12335974-12335993 Msa1179130:CDS 30.0%
! TGACCAAAATTTTCATCTCT+TGG - chr8_1:12335980-12335999 None:intergenic 30.0%
ATTTGGTACTTACTTGAAGA+AGG - chr8_1:12336471-12336490 None:intergenic 30.0%
GCAGATACTAAGAATACATT+TGG - chr8_1:12336488-12336507 None:intergenic 30.0%
CAATTATTCTTTGATATGCC+AGG + chr8_1:12336557-12336576 Msa1179130:intron 30.0%
ATGTTTATCCTCTCCAAATA+TGG - chr8_1:12336835-12336854 None:intergenic 30.0%
GAGGATAAACATAAATGCAA+AGG + chr8_1:12336843-12336862 Msa1179130:CDS 30.0%
ATCTTGTTCTTGAAAGATGA+TGG + chr8_1:12336883-12336902 Msa1179130:CDS 30.0%
TCTTGTTCTTGAAAGATGAT+GGG + chr8_1:12336884-12336903 Msa1179130:CDS 30.0%
!! TTCAATTGCTATTGGTTTCA+AGG - chr8_1:12336911-12336930 None:intergenic 30.0%
AAATTGTACTTTCAACACCT+TGG - chr8_1:12336999-12337018 None:intergenic 30.0%
!! AAGGTGTTGAAAGTACAATT+TGG + chr8_1:12336998-12337017 Msa1179130:CDS 30.0%
! TGAAAGTACAATTTGGCTAT+TGG + chr8_1:12337005-12337024 Msa1179130:CDS 30.0%
CTAAGAATAGTTCATACCAA+TGG - chr8_1:12337080-12337099 None:intergenic 30.0%
AATATAAAAAATGGGGTTGC+AGG + chr8_1:12337149-12337168 Msa1179130:intron 30.0%
! CTATTTGTTGCTATGATGAA+TGG - chr8_1:12337199-12337218 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG + chr8_1:12337197-12337216 Msa1179130:CDS 30.0%
TTTATTGTATCACGGAAATG+AGG - chr8_1:12337262-12337281 None:intergenic 30.0%
CTTCAATAGTTTACAAGGAT+TGG + chr8_1:12337371-12337390 Msa1179130:CDS 30.0%
AAATTAGATGGTCTAAATCG+TGG - chr8_1:12337449-12337468 None:intergenic 30.0%
TTAAGATTCCAAGTCAATAC+TGG + chr8_1:12337482-12337501 Msa1179130:intron 30.0%
!! TATTGTTTCCAGTATTGACT+TGG - chr8_1:12337493-12337512 None:intergenic 30.0%
TAATCTTGTCTTCTTGATTC+AGG + chr8_1:12337511-12337530 Msa1179130:intron 30.0%
AATCTTGTCTTCTTGATTCA+GGG + chr8_1:12337512-12337531 Msa1179130:intron 30.0%
!! TGTTGATGGACTAGAAATAT+GGG + chr8_1:12337602-12337621 Msa1179130:CDS 30.0%
AGAAATATGGGATGCTATTA+AGG + chr8_1:12337614-12337633 Msa1179130:CDS 30.0%
AATATAAGGAGACATAGTCT+TGG - chr8_1:12337647-12337666 None:intergenic 30.0%
AATCTTGCTCCATTATCATA+TGG + chr8_1:12337799-12337818 Msa1179130:CDS 30.0%
AACTTTGGACAATATCCTTA+TGG + chr8_1:12337849-12337868 Msa1179130:CDS 30.0%
GAAATTGAAGGGAAAATCAA+CGG + chr8_1:12338140-12338159 Msa1179130:CDS 30.0%
AAATTGAAGGGAAAATCAAC+GGG + chr8_1:12338141-12338160 Msa1179130:CDS 30.0%
!! GAAGAAGGTTTAACTTTTAG+AGG + chr8_1:12338239-12338258 Msa1179130:CDS 30.0%
GTGTGTACTACTATTGTATT+TGG + chr8_1:12338403-12338422 Msa1179130:three_prime_UTR 30.0%
! TCTAGGACATTAGATTCTTA+CGG + chr8_1:12338504-12338523 Msa1179130:three_prime_UTR 30.0%
GAGCAGATGTATAATCTATT+AGG + chr8_1:12338722-12338741 Msa1179130:three_prime_UTR 30.0%
GTTTGGCATCTTAAACAACA+AGG + chr8_1:12334534-12334553 Msa1179130:CDS 35.0%
AACAAGGGCCAAAAAATCAA+GGG + chr8_1:12334550-12334569 Msa1179130:CDS 35.0%
! GTTGATGCCCAAAAATGTTT+TGG + chr8_1:12334582-12334601 Msa1179130:CDS 35.0%
! ATAAGTGCTACTAAGACTGA+TGG + chr8_1:12334745-12334764 Msa1179130:CDS 35.0%
ATTCTTGACTGGGAAGTTAA+TGG - chr8_1:12334933-12334952 None:intergenic 35.0%
!!! GATGCTAATTTTGGAATTCC+TGG + chr8_1:12335233-12335252 Msa1179130:CDS 35.0%
AGATATTCCTAACCGTGAAT+CGG + chr8_1:12335316-12335335 Msa1179130:CDS 35.0%
! AATGATTTGGGAAATCCAGA+TGG + chr8_1:12335734-12335753 Msa1179130:CDS 35.0%
!! GTAAACTAACCTTTTCTGGT+TGG - chr8_1:12335839-12335858 None:intergenic 35.0%
! GGTAGTAAACTAACCTTTTC+TGG - chr8_1:12335843-12335862 None:intergenic 35.0%
! GTTAGTTTACTACCGTATAG+CGG + chr8_1:12335849-12335868 Msa1179130:intron 35.0%
TCATCTGACTTCCTTATGTA+TGG + chr8_1:12336007-12336026 Msa1179130:CDS 35.0%
!! ACTCATTTGGTGTGAAATTG+AGG - chr8_1:12336087-12336106 None:intergenic 35.0%
! ATTTCTTTAAGGGCTGGTAA+GGG - chr8_1:12336187-12336206 None:intergenic 35.0%
GGTGCGAAAGATTTCTTTAA+GGG - chr8_1:12336197-12336216 None:intergenic 35.0%
GCTGCTAATATATGCATGAA+AGG - chr8_1:12336309-12336328 None:intergenic 35.0%
TGGATGACTGATGAAGAATT+TGG + chr8_1:12336406-12336425 Msa1179130:CDS 35.0%
TGAAGAATTTGGAAGAGAGA+TGG + chr8_1:12336417-12336436 Msa1179130:CDS 35.0%
!! ATTTTGATCACCATAGACAG+TGG - chr8_1:12336610-12336629 None:intergenic 35.0%
!!! TTTTTGGAACAGGCACTTAA+TGG + chr8_1:12336769-12336788 Msa1179130:intron 35.0%
ATGCATCATGGTAATCTAAG+AGG - chr8_1:12336807-12336826 None:intergenic 35.0%
AATATGGCATGAATGCATCA+TGG - chr8_1:12336819-12336838 None:intergenic 35.0%
TGATGCATTCATGCCATATT+TGG + chr8_1:12336819-12336838 Msa1179130:CDS 35.0%
CAAGAACAAGATTGTTCTTG+TGG - chr8_1:12336875-12336894 None:intergenic 35.0%
TTAAGTTTGCCACACTCAAA+TGG + chr8_1:12336931-12336950 Msa1179130:CDS 35.0%
TAAGTTTGCCACACTCAAAT+GGG + chr8_1:12336932-12336951 Msa1179130:CDS 35.0%
CTTTGCTTTCAGAACCATAT+TGG - chr8_1:12336960-12336979 None:intergenic 35.0%
TACAATTTGGCTATTGGCAA+AGG + chr8_1:12337011-12337030 Msa1179130:CDS 35.0%
! ATAGAGCAAACATTTTTGCC+AGG + chr8_1:12337328-12337347 Msa1179130:CDS 35.0%
GAAGAAATCTCGACTGAATT+TGG - chr8_1:12337355-12337374 None:intergenic 35.0%
ATCTTGTCTTCTTGATTCAG+GGG + chr8_1:12337513-12337532 Msa1179130:intron 35.0%
!! CTGTTGATGGACTAGAAATA+TGG + chr8_1:12337601-12337620 Msa1179130:CDS 35.0%
! TTTTGCACTACTTCATCTGT+TGG - chr8_1:12337672-12337691 None:intergenic 35.0%
AACAGATGAAGTAGTGCAAA+AGG + chr8_1:12337671-12337690 Msa1179130:CDS 35.0%
! TCTTGAAGTGTTTGCATCTT+AGG - chr8_1:12337771-12337790 None:intergenic 35.0%
TGAAGCAGTCCATATGATAA+TGG - chr8_1:12337811-12337830 None:intergenic 35.0%
TTTGGACAATATCCTTATGG+AGG + chr8_1:12337852-12337871 Msa1179130:CDS 35.0%
TTCAGGATATATCCTCCATA+AGG - chr8_1:12337867-12337886 None:intergenic 35.0%
ATGAATCTCCTACTAAGAGT+TGG - chr8_1:12337894-12337913 None:intergenic 35.0%
TCTTAGTAGGAGATTCATTC+CGG + chr8_1:12337896-12337915 Msa1179130:CDS 35.0%
AACTCCAGAATATGATGAGA+TGG + chr8_1:12337926-12337945 Msa1179130:CDS 35.0%
TTCACCATCTCATCATATTC+TGG - chr8_1:12337933-12337952 None:intergenic 35.0%
! TCAATAAGCGTCTGAAACTT+TGG - chr8_1:12337990-12338009 None:intergenic 35.0%
!!! GAATGACAAGTTTTGGACAT+CGG + chr8_1:12338070-12338089 Msa1179130:CDS 35.0%
! TTTGCTTCCAAACTTTTGGA+AGG - chr8_1:12338114-12338133 None:intergenic 35.0%
TCGATGTACATCGATGTTAT+TGG - chr8_1:12338342-12338361 None:intergenic 35.0%
CTAGGACATTAGATTCTTAC+GGG + chr8_1:12338505-12338524 Msa1179130:three_prime_UTR 35.0%
TAGGACATTAGATTCTTACG+GGG + chr8_1:12338506-12338525 Msa1179130:three_prime_UTR 35.0%
TTACGGGGTTCTTAGTTAAT+AGG + chr8_1:12338521-12338540 Msa1179130:three_prime_UTR 35.0%
CAACAAGGGCCAAAAAATCA+AGG + chr8_1:12334549-12334568 Msa1179130:CDS 40.0%
ACAAGGGCCAAAAAATCAAG+GGG + chr8_1:12334551-12334570 Msa1179130:CDS 40.0%
TCAACTGCATAGAGACGTTA+CGG - chr8_1:12334726-12334745 None:intergenic 40.0%
TCTTCCTCAGTTACCAACTT+TGG + chr8_1:12335172-12335191 Msa1179130:CDS 40.0%
CTTCCTCAGTTACCAACTTT+GGG + chr8_1:12335173-12335192 Msa1179130:CDS 40.0%
CTTCAAGAGTCACACTAACA+AGG - chr8_1:12335298-12335317 None:intergenic 40.0%
CATCATTGGTGAAGAAGATG+CGG - chr8_1:12335394-12335413 None:intergenic 40.0%
GTATCTTCCAAGTCAAACAC+CGG + chr8_1:12335610-12335629 Msa1179130:CDS 40.0%
GGTAGAAAACCAACCAGAAA+AGG + chr8_1:12335827-12335846 Msa1179130:CDS 40.0%
AGATCCTAAGAGTGAGAAAC+CGG + chr8_1:12335940-12335959 Msa1179130:intron 40.0%
CTTGGAACATAAATCACACC+CGG - chr8_1:12335962-12335981 None:intergenic 40.0%
TCGAAGCTATCGAACTCATT+TGG - chr8_1:12336100-12336119 None:intergenic 40.0%
! GAAGTACGTGATCTTTTCGA+AGG + chr8_1:12336121-12336140 Msa1179130:CDS 40.0%
! GATTTCTTTAAGGGCTGGTA+AGG - chr8_1:12336188-12336207 None:intergenic 40.0%
! CGAAAGATTTCTTTAAGGGC+TGG - chr8_1:12336193-12336212 None:intergenic 40.0%
CGGTGCGAAAGATTTCTTTA+AGG - chr8_1:12336198-12336217 None:intergenic 40.0%
AAAGAAATCTTTCGCACCGA+TGG + chr8_1:12336199-12336218 Msa1179130:CDS 40.0%
GTACCTTTGATTACATGAGG+TGG - chr8_1:12336247-12336266 None:intergenic 40.0%
! GAGGTACCTTTGATTACATG+AGG - chr8_1:12336250-12336269 None:intergenic 40.0%
!! TGAATCGATTTGGATGAACG+AGG - chr8_1:12336269-12336288 None:intergenic 40.0%
TGAAGAAGGCGAATCACATT+AGG - chr8_1:12336457-12336476 None:intergenic 40.0%
!! GTATCTAGTGTGCTTTTTGG+TGG - chr8_1:12336588-12336607 None:intergenic 40.0%
! GTGGTATCTAGTGTGCTTTT+TGG - chr8_1:12336591-12336610 None:intergenic 40.0%
ACACTAGATACCACTGTCTA+TGG + chr8_1:12336597-12336616 Msa1179130:CDS 40.0%
GAACACTTAGAGACTAACCT+TGG + chr8_1:12336645-12336664 Msa1179130:CDS 40.0%
CTTCTACTGTGATTTCACCA+AGG - chr8_1:12336665-12336684 None:intergenic 40.0%
TGGTGAAATCACAGTAGAAG+AGG + chr8_1:12336665-12336684 Msa1179130:CDS 40.0%
CATTCATGCCATATTTGGAG+AGG + chr8_1:12336824-12336843 Msa1179130:CDS 40.0%
AAGTTTGCCACACTCAAATG+GGG + chr8_1:12336933-12336952 Msa1179130:CDS 40.0%
ATCATCAACTCATGAGCCAT+TGG + chr8_1:12337061-12337080 Msa1179130:CDS 40.0%
CAGGTTAAATACTCATGCAG+TGG + chr8_1:12337168-12337187 Msa1179130:intron 40.0%
CGACAATCTCTAATCAATGC+TGG + chr8_1:12337298-12337317 Msa1179130:CDS 40.0%
CAATCTCTAATCAATGCTGG+TGG + chr8_1:12337301-12337320 Msa1179130:CDS 40.0%
! TAAGATCAGCTGGTAATGCT+TGG - chr8_1:12337408-12337427 None:intergenic 40.0%
TACCAGCTGATCTTATCAAG+AGG + chr8_1:12337413-12337432 Msa1179130:CDS 40.0%
TACCTCTTGATAAGATCAGC+TGG - chr8_1:12337418-12337437 None:intergenic 40.0%
TAACACAAGACGAAGTCCAT+GGG - chr8_1:12337565-12337584 None:intergenic 40.0%
CTAGTCCATCAACAGCATAA+GGG - chr8_1:12337596-12337615 None:intergenic 40.0%
TCTAGTCCATCAACAGCATA+AGG - chr8_1:12337597-12337616 None:intergenic 40.0%
TATGGGATGCTATTAAGGCA+TGG + chr8_1:12337619-12337638 Msa1179130:CDS 40.0%
ATGGGATGCTATTAAGGCAT+GGG + chr8_1:12337620-12337639 Msa1179130:CDS 40.0%
AGGACACTGAACTACAAACT+TGG + chr8_1:12337691-12337710 Msa1179130:CDS 40.0%
ACACTGAACTACAAACTTGG+TGG + chr8_1:12337694-12337713 Msa1179130:CDS 40.0%
! TGAACTACAAACTTGGTGGA+AGG + chr8_1:12337698-12337717 Msa1179130:CDS 40.0%
TGGAAGGAAGCTGTAGAAAA+GGG + chr8_1:12337714-12337733 Msa1179130:CDS 40.0%
GATGCAAACACTTCAAGACT+TGG + chr8_1:12337773-12337792 Msa1179130:CDS 40.0%
CTTCATGCAGCAGTTAACTT+TGG + chr8_1:12337834-12337853 Msa1179130:CDS 40.0%
ATCTCCTACTAAGAGTTGGA+CGG - chr8_1:12337890-12337909 None:intergenic 40.0%
!! TCATCATATTCTGGAGTTCC+TGG - chr8_1:12337924-12337943 None:intergenic 40.0%
GATGGTGAAAAGTCCTCAAA+AGG + chr8_1:12337944-12337963 Msa1179130:CDS 40.0%
! GTTCTCAAATACGCCTTTTG+AGG - chr8_1:12337960-12337979 None:intergenic 40.0%
! GAGAGAGGAATGACAAGTTT+TGG + chr8_1:12338063-12338082 Msa1179130:CDS 40.0%
!!! AGTTTTGGACATCGGATACA+AGG + chr8_1:12338078-12338097 Msa1179130:CDS 40.0%
!! GTTTTGGACATCGGATACAA+GGG + chr8_1:12338079-12338098 Msa1179130:CDS 40.0%
! TCTAGTTTGAAAAACCGCAC+TGG + chr8_1:12338176-12338195 Msa1179130:CDS 40.0%
AAAGTGTAGGGCAATTCAAC+TGG - chr8_1:12338203-12338222 None:intergenic 40.0%
AACCTTCTTCACTTGAACGA+AGG - chr8_1:12338229-12338248 None:intergenic 40.0%
TGGAAATGAACTACTCTGCA+TGG + chr8_1:12338758-12338777 Msa1179130:three_prime_UTR 40.0%
AAATGAACTACTCTGCATGG+AGG + chr8_1:12338761-12338780 Msa1179130:three_prime_UTR 40.0%
!!! CCACAGTCCCCTTGATTTTT+TGG - chr8_1:12334561-12334580 None:intergenic 45.0%
CCAAAAAATCAAGGGGACTG+TGG + chr8_1:12334558-12334577 Msa1179130:CDS 45.0%
TTCAATGCCATAACGTCCGT+CGG + chr8_1:12334607-12334626 Msa1179130:CDS 45.0%
AATAACACCGCCTTTACCGA+CGG - chr8_1:12334626-12334645 None:intergenic 45.0%
GACTCCTCCGATGATATTTC+CGG - chr8_1:12334656-12334675 None:intergenic 45.0%
AATATCATCGGAGGAGTCAC+CGG + chr8_1:12334658-12334677 Msa1179130:CDS 45.0%
GCAAATGGAAAGGGTCTAGT+TGG + chr8_1:12335125-12335144 Msa1179130:intron 45.0%
TGGAAAGGGTCTAGTTGGAA+AGG + chr8_1:12335130-12335149 Msa1179130:CDS 45.0%
TCTTGTCTTGCTCCCAAAGT+TGG - chr8_1:12335188-12335207 None:intergenic 45.0%
! AACTGAACCGATTCACGGTT+AGG - chr8_1:12335326-12335345 None:intergenic 45.0%
GAAGAGTTGCAGACTCTAAG+AGG + chr8_1:12335656-12335675 Msa1179130:CDS 45.0%
! TTGCAGACTCTAAGAGGAGA+TGG + chr8_1:12335662-12335681 Msa1179130:CDS 45.0%
! ACTCTAAGAGGAGATGGAAC+TGG + chr8_1:12335668-12335687 Msa1179130:CDS 45.0%
! AACTGGAGAGCGCAAAGAAT+CGG + chr8_1:12335685-12335704 Msa1179130:CDS 45.0%
AGAGCGCAAAGAATCGGATA+GGG + chr8_1:12335691-12335710 Msa1179130:CDS 45.0%
GATTTGGGAAATCCAGATGG+TGG + chr8_1:12335737-12335756 Msa1179130:CDS 45.0%
GATCCTAAGAGTGAGAAACC+GGG + chr8_1:12335941-12335960 Msa1179130:intron 45.0%
! GTACGTGATCTTTTCGAAGG+TGG + chr8_1:12336124-12336143 Msa1179130:CDS 45.0%
! CTTGAGGACTTGTTCACCAT+CGG - chr8_1:12336218-12336237 None:intergenic 45.0%
CCTTTGATTACATGAGGTGG+TGG - chr8_1:12336244-12336263 None:intergenic 45.0%
CCACCACCTCATGTAATCAA+AGG + chr8_1:12336241-12336260 Msa1179130:CDS 45.0%
TTTGGAAGAGAGATGGTTGC+TGG + chr8_1:12336424-12336443 Msa1179130:CDS 45.0%
!! TGCTTTTTGGTGGAAACTCC+TGG - chr8_1:12336578-12336597 None:intergenic 45.0%
TATTGGACCCCATTTGAGTG+TGG - chr8_1:12336943-12336962 None:intergenic 45.0%
CACTCAAATGGGGTCCAATA+TGG + chr8_1:12336943-12336962 Msa1179130:CDS 45.0%
ATCTCGACTGAATTTGGTCC+TGG - chr8_1:12337349-12337368 None:intergenic 45.0%
! ATCAGCTGGTAATGCTTGGT+CGG - chr8_1:12337404-12337423 None:intergenic 45.0%
AACACAAGACGAAGTCCATG+GGG - chr8_1:12337564-12337583 None:intergenic 45.0%
CTAACACAAGACGAAGTCCA+TGG - chr8_1:12337566-12337585 None:intergenic 45.0%
GACTACCCTTATGCTGTTGA+TGG + chr8_1:12337588-12337607 Msa1179130:CDS 45.0%
GTGGAAGGAAGCTGTAGAAA+AGG + chr8_1:12337713-12337732 Msa1179130:CDS 45.0%
GAAGCTGTAGAAAAGGGTCA+TGG + chr8_1:12337720-12337739 Msa1179130:CDS 45.0%
GTGACTTGAAAGACAAGCCA+TGG + chr8_1:12337742-12337761 Msa1179130:CDS 45.0%
ACTTGAAAGACAAGCCATGG+TGG + chr8_1:12337745-12337764 Msa1179130:CDS 45.0%
TACTAAGAGTTGGACGGTTC+AGG - chr8_1:12337884-12337903 None:intergenic 45.0%
TGAACCGTCCAACTCTTAGT+AGG + chr8_1:12337883-12337902 Msa1179130:CDS 45.0%
GTCAAGACATGCTTCTGATG+AGG + chr8_1:12338031-12338050 Msa1179130:CDS 45.0%
GTACAGGCCTTCCAAAAGTT+TGG + chr8_1:12338104-12338123 Msa1179130:CDS 45.0%
TTGAAGGGAAAATCAACGGG+AGG + chr8_1:12338144-12338163 Msa1179130:CDS 45.0%
GAACGAAGGAGCAAAGTGTA+GGG - chr8_1:12338215-12338234 None:intergenic 45.0%
TGAACGAAGGAGCAAAGTGT+AGG - chr8_1:12338216-12338235 None:intergenic 45.0%
CTCCTTCGTTCAAGTGAAGA+AGG + chr8_1:12338224-12338243 Msa1179130:CDS 45.0%
!! TTGATAAATTATAAAAATAT+TGG + chr8_1:12335513-12335532 Msa1179130:intron 5.0%
!! ATGATTATTAATATAAAAAA+TGG + chr8_1:12337140-12337159 Msa1179130:intron 5.0%
!! TGATTATTAATATAAAAAAT+GGG + chr8_1:12337141-12337160 Msa1179130:intron 5.0%
ATAACGTCCGTCGGTAAAGG+CGG + chr8_1:12334616-12334635 Msa1179130:CDS 50.0%
GACACCGCCGGAAATATCAT+CGG + chr8_1:12334646-12334665 Msa1179130:CDS 50.0%
TCCTCCGATGATATTTCCGG+CGG - chr8_1:12334653-12334672 None:intergenic 50.0%
GACACTGCCACTGCTTTCTT+AGG + chr8_1:12334700-12334719 Msa1179130:CDS 50.0%
GTTACGGCCTAAGAAAGCAG+TGG - chr8_1:12334710-12334729 None:intergenic 50.0%
!! GCTCCCAAAGTTGGTAACTG+AGG - chr8_1:12335179-12335198 None:intergenic 50.0%
AATGGAGCCGGTGTTTGACT+TGG - chr8_1:12335620-12335639 None:intergenic 50.0%
! GAGAGCGCAAAGAATCGGAT+AGG + chr8_1:12335690-12335709 Msa1179130:CDS 50.0%
TACCACTTCTAACCCTGCGA+GGG - chr8_1:12335811-12335830 None:intergenic 50.0%
ACACCCGGTTTCTCACTCTT+AGG - chr8_1:12335947-12335966 None:intergenic 50.0%
!! CATGAGGTGGTGGAAACTTG+AGG - chr8_1:12336234-12336253 None:intergenic 50.0%
GAGCAGTTAGCAAGTCTGCA+TGG + chr8_1:12336386-12336405 Msa1179130:intron 50.0%
GTATACTTGCCTGCTGACCA+AGG + chr8_1:12336979-12336998 Msa1179130:CDS 50.0%
CTTTCAACACCTTGGTCAGC+AGG - chr8_1:12336991-12337010 None:intergenic 50.0%
!! ATTCAGGGGACTAGCTGTTG+AGG + chr8_1:12337527-12337546 Msa1179130:intron 50.0%
ACACAAGACGAAGTCCATGG+GGG - chr8_1:12337563-12337582 None:intergenic 50.0%
GTTTGCATCTTAGGCCACCA+TGG - chr8_1:12337762-12337781 None:intergenic 50.0%
!! TATTCTGGAGTTCCTGGCTC+CGG - chr8_1:12337918-12337937 None:intergenic 50.0%
GCTTCTGATGAGGTGTACCT+CGG + chr8_1:12338041-12338060 Msa1179130:CDS 50.0%
ACTTGTCATTCCTCTCTCCG+AGG - chr8_1:12338061-12338080 None:intergenic 50.0%
ATCGGATACAAGGGCAGTAC+AGG + chr8_1:12338088-12338107 Msa1179130:CDS 50.0%
GCAATTCAACTGGTCCAGTG+CGG - chr8_1:12338193-12338212 None:intergenic 50.0%
GCCATAACGTCCGTCGGTAA+AGG + chr8_1:12334613-12334632 Msa1179130:CDS 55.0%
GCCTTTACCGACGGACGTTA+TGG - chr8_1:12334617-12334636 None:intergenic 55.0%
ACCGCCGGAAATATCATCGG+AGG + chr8_1:12334649-12334668 Msa1179130:CDS 55.0%
CACAACTCCGCCAACAATGC+CGG - chr8_1:12334680-12334699 None:intergenic 55.0%
ACAAGTGCGTCACCACCATC+TGG - chr8_1:12335752-12335771 None:intergenic 55.0%
CACTTGTCCGACCAGTCCTT+GGG + chr8_1:12335765-12335784 Msa1179130:CDS 55.0%
ACTTGTCCGACCAGTCCTTG+GGG + chr8_1:12335766-12335785 Msa1179130:CDS 55.0%
! TTGATCCCCCAAGGACTGGT+CGG - chr8_1:12335775-12335794 None:intergenic 55.0%
GATAGGTGCTTGATCCCCCA+AGG - chr8_1:12335784-12335803 None:intergenic 55.0%
CTTCTAACCCTGCGAGGGTA+GGG - chr8_1:12335806-12335825 None:intergenic 55.0%
ACTTCTAACCCTGCGAGGGT+AGG - chr8_1:12335807-12335826 None:intergenic 55.0%
TACCCTCGCAGGGTTAGAAG+TGG + chr8_1:12335806-12335825 Msa1179130:CDS 55.0%
CTACCACTTCTAACCCTGCG+AGG - chr8_1:12335812-12335831 None:intergenic 55.0%
CACAAGACGAAGTCCATGGG+GGG - chr8_1:12337562-12337581 None:intergenic 55.0%
AGGAGATTCATTCCGGAGCC+AGG + chr8_1:12337903-12337922 Msa1179130:CDS 55.0%
ATGAGGTGTACCTCGGAGAG+AGG + chr8_1:12338048-12338067 Msa1179130:CDS 55.0%
!! GGCGGTGTTATTGACACCGC+CGG + chr8_1:12334634-12334653 Msa1179130:CDS 60.0%
GGAGGAGTCACCGGCATTGT+TGG + chr8_1:12334667-12334686 Msa1179130:CDS 60.0%
GGAGTCACCGGCATTGTTGG+CGG + chr8_1:12334670-12334689 Msa1179130:CDS 60.0%
CGGCATTGTTGGCGGAGTTG+TGG + chr8_1:12334678-12334697 Msa1179130:CDS 60.0%
GCACTTGTCCGACCAGTCCT+TGG + chr8_1:12335764-12335783 Msa1179130:CDS 60.0%
CTTGTCCGACCAGTCCTTGG+GGG + chr8_1:12335767-12335786 Msa1179130:CDS 60.0%
GTGCTTGATCCCCCAAGGAC+TGG - chr8_1:12335779-12335798 None:intergenic 60.0%
CACCTATCCCTACCCTCGCA+GGG + chr8_1:12335796-12335815 Msa1179130:CDS 60.0%
AACCCTGCGAGGGTAGGGAT+AGG - chr8_1:12335801-12335820 None:intergenic 60.0%
GAAGTCCATGGGGGGAAGAC+GGG - chr8_1:12337554-12337573 None:intergenic 60.0%
CGAAGTCCATGGGGGGAAGA+CGG - chr8_1:12337555-12337574 None:intergenic 60.0%
GCACCTATCCCTACCCTCGC+AGG + chr8_1:12335795-12335814 Msa1179130:CDS 65.0%
GAGGACCCGTCTTCCCCCCA+TGG + chr8_1:12337546-12337565 Msa1179130:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 12334463 12338789 12334463 ID=Msa1179130;Name=Msa1179130
chr8_1 mRNA 12334463 12338789 12334463 ID=Msa1179130-mRNA-1;Parent=Msa1179130;Name=Msa1179130-mRNA-1;_AED=0.28;_eAED=0.28;_QI=69|1|1|1|1|1|9|503|865
chr8_1 exon 12334463 12334766 12334463 ID=Msa1179130-mRNA-1:exon:4369;Parent=Msa1179130-mRNA-1
chr8_1 exon 12335126 12335412 12335126 ID=Msa1179130-mRNA-1:exon:4370;Parent=Msa1179130-mRNA-1
chr8_1 exon 12335608 12335848 12335608 ID=Msa1179130-mRNA-1:exon:4371;Parent=Msa1179130-mRNA-1
chr8_1 exon 12335942 12336262 12335942 ID=Msa1179130-mRNA-1:exon:4372;Parent=Msa1179130-mRNA-1
chr8_1 exon 12336392 12336477 12336392 ID=Msa1179130-mRNA-1:exon:4373;Parent=Msa1179130-mRNA-1
chr8_1 exon 12336579 12336686 12336579 ID=Msa1179130-mRNA-1:exon:4374;Parent=Msa1179130-mRNA-1
chr8_1 exon 12336781 12337082 12336781 ID=Msa1179130-mRNA-1:exon:4375;Parent=Msa1179130-mRNA-1
chr8_1 exon 12337171 12337434 12337171 ID=Msa1179130-mRNA-1:exon:4376;Parent=Msa1179130-mRNA-1
chr8_1 exon 12337533 12338789 12337533 ID=Msa1179130-mRNA-1:exon:4377;Parent=Msa1179130-mRNA-1
chr8_1 five_prime_UTR 12334463 12334531 12334463 ID=Msa1179130-mRNA-1:five_prime_utr;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12334532 12334766 12334532 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12335126 12335412 12335126 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12335608 12335848 12335608 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12335942 12336262 12335942 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12336392 12336477 12336392 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12336579 12336686 12336579 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12336781 12337082 12336781 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12337171 12337434 12337171 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 CDS 12337533 12338286 12337533 ID=Msa1179130-mRNA-1:cds;Parent=Msa1179130-mRNA-1
chr8_1 three_prime_UTR 12338287 12338789 12338287 ID=Msa1179130-mRNA-1:three_prime_utr;Parent=Msa1179130-mRNA-1
Gene Sequence

>Msa1179130

ATGTTTGGCATCTTAAACAACAAGGGCCAAAAAATCAAGGGGACTGTGGTGTTGATGCCCAAAAATGTTTTGGATTTCAATGCCATAACGTCCGTCGGTAAAGGCGGTGTTATTGACACCGCCGGAAATATCATCGGAGGAGTCACCGGCATTGTTGGCGGAGTTGTGGACACTGCCACTGCTTTCTTAGGCCGTAACGTCTCTATGCAGTTGATAAGTGCTACTAAGACTGATGCAAATGGAAAGGGTCTAGTTGGAAAGGAAACATTTTTGAGCAAACATCTTCCTCAGTTACCAACTTTGGGAGCAAGACAAGATGCATTCAGTATTTTCTTTGAATATGATGCTAATTTTGGAATTCCTGGAGCATTTTACATAAGAAATTATACACAAGCTGAGTTTTTCCTTGTTAGTGTGACTCTTGAAGATATTCCTAACCGTGAATCGGTTCAGTTTATTTGTAACTCATGGGTCTACAACTTCAAAAGTTACAAAAAAGACCGCATCTTCTTCACCAATGATACGTATCTTCCAAGTCAAACACCGGCTCCATTAAATCATTATAGAGAAGAAGAGTTGCAGACTCTAAGAGGAGATGGAACTGGAGAGCGCAAAGAATCGGATAGGGTTTATGATTATGATGTTTATAATGATTTGGGAAATCCAGATGGTGGTGACGCACTTGTCCGACCAGTCCTTGGGGGATCAAGCACCTATCCCTACCCTCGCAGGGTTAGAAGTGGTAGAAAACCAACCAGAAAAGATCCTAAGAGTGAGAAACCGGGTGTGATTTATGTTCCAAGAGATGAAAATTTTGGTCATTTGAAGTCATCTGACTTCCTTATGTATGGAATAAAATCACTGTCTCAAAATGTCATACCTTTGTTTAAATCAGTGATTTTTGACCTCAATTTCACACCAAATGAGTTCGATAGCTTCGATGAAGTACGTGATCTTTTCGAAGGTGGAATTAAGCTTCCTACAGATATACTTAGTCAAATTAGTCCCTTACCAGCCCTTAAAGAAATCTTTCGCACCGATGGTGAACAAGTCCTCAAGTTTCCACCACCTCATGTAATCAAAGTTAGCAAGTCTGCATGGATGACTGATGAAGAATTTGGAAGAGAGATGGTTGCTGGTGTAAATCCTAATGTGATTCGCCTTCTTCAAGAGTTTCCACCAAAAAGCACACTAGATACCACTGTCTATGGTGATCAAAATAGTACAATAACAAAAGAACACTTAGAGACTAACCTTGGTGAAATCACAGTAGAAGAGGCACTTAATGGAAAGAGATTATTCCTCTTAGATTACCATGATGCATTCATGCCATATTTGGAGAGGATAAACATAAATGCAAAGGCTTATGCCACAAGAACAATCTTGTTCTTGAAAGATGATGGGACCTTGAAACCAATAGCAATTGAATTAAGTTTGCCACACTCAAATGGGGTCCAATATGGTTCTGAAAGCAAAGTATACTTGCCTGCTGACCAAGGTGTTGAAAGTACAATTTGGCTATTGGCAAAGGCTCATGTCATTGTAAATGACTCATGCTATCATCAACTCATGAGCCATTGGTTAAATACTCATGCAGTGGTTGAACCATTCATCATAGCAACAAATAGGCATCTAAGTGTTCTTCACCCAATTAATAAACTTTTATTTCCTCATTTCCGTGATACAATAAATATCAATGGACTTGCTCGACAATCTCTAATCAATGCTGGTGGCATTATAGAGCAAACATTTTTGCCAGGACCAAATTCAGTCGAGATTTCTTCAATAGTTTACAAGGATTGGGTTTTCACCGACCAAGCATTACCAGCTGATCTTATCAAGAGGGGACTAGCTGTTGAGGACCCGTCTTCCCCCCATGGACTTCGTCTTGTGTTAGAAGACTACCCTTATGCTGTTGATGGACTAGAAATATGGGATGCTATTAAGGCATGGGTCCAAGACTATGTCTCCTTATATTATCCAACAGATGAAGTAGTGCAAAAGGACACTGAACTACAAACTTGGTGGAAGGAAGCTGTAGAAAAGGGTCATGGTGACTTGAAAGACAAGCCATGGTGGCCTAAGATGCAAACACTTCAAGACTTGGTTCAATCTTGCTCCATTATCATATGGACTGCTTCAGCTCTTCATGCAGCAGTTAACTTTGGACAATATCCTTATGGAGGATATATCCTGAACCGTCCAACTCTTAGTAGGAGATTCATTCCGGAGCCAGGAACTCCAGAATATGATGAGATGGTGAAAAGTCCTCAAAAGGCGTATTTGAGAACTATTACACCAAAGTTTCAGACGCTTATTGATCTTTCTGTGATTGAGATATTGTCAAGACATGCTTCTGATGAGGTGTACCTCGGAGAGAGGAATGACAAGTTTTGGACATCGGATACAAGGGCAGTACAGGCCTTCCAAAAGTTTGGAAGCAAATTATCTGAAATTGAAGGGAAAATCAACGGGAGGAACAAAGATTCTAGTTTGAAAAACCGCACTGGACCAGTTGAATTGCCCTACACTTTGCTCCTTCGTTCAAGTGAAGAAGGTTTAACTTTTAGAGGAATTCCCAACAGTATCTCTATTTAG
Protein sequence

>Msa1179130

MFGILNNKGQKIKGTVVLMPKNVLDFNAITSVGKGGVIDTAGNIIGGVTGIVGGVVDTATAFLGRNVSMQLISATKTDANGKGLVGKETFLSKHLPQLPTLGARQDAFSIFFEYDANFGIPGAFYIRNYTQAEFFLVSVTLEDIPNRESVQFICNSWVYNFKSYKKDRIFFTNDTYLPSQTPAPLNHYREEELQTLRGDGTGERKESDRVYDYDVYNDLGNPDGGDALVRPVLGGSSTYPYPRRVRSGRKPTRKDPKSEKPGVIYVPRDENFGHLKSSDFLMYGIKSLSQNVIPLFKSVIFDLNFTPNEFDSFDEVRDLFEGGIKLPTDILSQISPLPALKEIFRTDGEQVLKFPPPHVIKVSKSAWMTDEEFGREMVAGVNPNVIRLLQEFPPKSTLDTTVYGDQNSTITKEHLETNLGEITVEEALNGKRLFLLDYHDAFMPYLERININAKAYATRTILFLKDDGTLKPIAIELSLPHSNGVQYGSESKVYLPADQGVESTIWLLAKAHVIVNDSCYHQLMSHWLNTHAVVEPFIIATNRHLSVLHPINKLLFPHFRDTININGLARQSLINAGGIIEQTFLPGPNSVEISSIVYKDWVFTDQALPADLIKRGLAVEDPSSPHGLRLVLEDYPYAVDGLEIWDAIKAWVQDYVSLYYPTDEVVQKDTELQTWWKEAVEKGHGDLKDKPWWPKMQTLQDLVQSCSIIIWTASALHAAVNFGQYPYGGYILNRPTLSRRFIPEPGTPEYDEMVKSPQKAYLRTITPKFQTLIDLSVIEILSRHASDEVYLGERNDKFWTSDTRAVQAFQKFGSKLSEIEGKINGRNKDSSLKNRTGPVELPYTLLLRSSEEGLTFRGIPNSISI*