AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1314070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1314070 MtrunA17_Chr8g0343011 94.913 865 42 1 1 863 1 865 0.0 1669
Msa1314070 MtrunA17_Chr8g0342951 85.023 868 125 1 1 863 1 868 0.0 1537
Msa1314070 MtrunA17_Chr8g0342971 81.954 870 150 3 1 863 1 870 0.0 1488
Msa1314070 MtrunA17_Chr8g0344211 80.991 868 160 1 1 863 1 868 0.0 1477
Msa1314070 MtrunA17_Chr8g0342891 77.419 868 179 4 5 863 2 861 0.0 1420
Msa1314070 MtrunA17_Chr8g0342921 77.931 870 184 5 1 863 1 869 0.0 1416
Msa1314070 MtrunA17_Chr8g0342901 72.643 859 195 6 9 863 6 828 0.0 1290
Msa1314070 MtrunA17_Chr8g0342931 81.733 750 132 1 119 863 1 750 0.0 1288
Msa1314070 MtrunA17_Chr2g0329911 70.426 869 243 3 1 863 1 861 0.0 1283
Msa1314070 MtrunA17_Chr8g0342881 67.874 856 263 3 13 863 8 856 0.0 1234
Msa1314070 MtrunA17_Chr2g0329901 65.438 868 290 4 1 863 1 863 0.0 1187
Msa1314070 MtrunA17_Chr5g0406871 63.751 869 299 8 7 863 3 867 0.0 1167
Msa1314070 MtrunA17_Chr8g0343021 63.279 866 305 6 7 863 3 864 0.0 1152
Msa1314070 MtrunA17_Chr8g0343031 63.720 871 294 7 7 863 3 865 0.0 1150
Msa1314070 MtrunA17_Chr3g0120071 63.140 860 308 5 8 863 4 858 0.0 1130
Msa1314070 MtrunA17_Chr8g0343001 63.237 865 247 10 9 863 4 807 0.0 1103
Msa1314070 MtrunA17_Chr8g0342991 63.279 866 245 12 9 863 4 807 0.0 1098
Msa1314070 MtrunA17_Chr8g0342981 65.111 814 244 8 65 863 35 823 0.0 1070
Msa1314070 MtrunA17_Chr1g0191921 56.849 876 343 7 1 863 5 858 0.0 989
Msa1314070 MtrunA17_Chr7g0272791 55.743 888 347 11 1 863 1 867 0.0 987
Msa1314070 MtrunA17_Chr1g0205611 55.200 875 351 9 9 863 3 856 0.0 981
Msa1314070 MtrunA17_Chr8g0344201 45.844 818 427 10 57 862 113 926 0.0 723
Msa1314070 MtrunA17_Chr8g0344241 84.051 395 63 0 469 863 67 461 0.0 710
Msa1314070 MtrunA17_Chr8g0344241 61.667 60 18 1 294 348 9 68 6.82e-14 75.1
Msa1314070 MtrunA17_Chr3g0118651 42.521 849 444 13 32 863 82 903 0.0 662
Msa1314070 MtrunA17_Chr3g0118641 42.926 827 442 15 54 863 89 902 0.0 652
Msa1314070 MtrunA17_Chr4g0033171 47.183 710 354 13 168 863 23 725 0.0 631
Msa1314070 MtrunA17_Chr8g0377101 41.555 823 443 16 64 863 109 916 0.0 625
Msa1314070 MtrunA17_Chr8g0338451 40.413 824 449 14 51 846 41 850 0.0 620
Msa1314070 MtrunA17_Chr4g0047281 39.771 875 484 16 3 862 48 894 0.0 612
Msa1314070 MtrunA17_Chr3g0118621 44.329 767 404 13 113 863 106 865 0.0 608
Msa1314070 MtrunA17_Chr6g0471951 39.841 502 259 5 327 824 18 480 4.00e-126 388
Msa1314070 MtrunA17_Chr7g0218231 59.829 117 46 1 517 632 16 132 1.94e-43 154
Msa1314070 MtrunA17_Chr6g0468081 55.056 89 39 1 545 632 1 89 2.43e-27 106
Msa1314070 MtrunA17_Chr4g0047271 36.264 91 58 0 772 862 1 91 5.20e-15 71.2
Msa1314070 MtrunA17_Chr3g0137991 33.600 125 67 3 739 863 1 109 9.83e-13 65.5
Msa1314070 MtrunA17_Chr7g0272781 44.444 63 34 1 755 817 8 69 1.33e-11 61.6
Msa1314070 MtrunA17_Chr2g0277191 48.214 56 29 0 736 791 58 113 1.81e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1314070 AT3G22400.1 55.606 874 343 10 14 863 34 886 0.0 986
Msa1314070 AT1G55020.1 54.576 885 354 11 1 863 1 859 0.0 973
Msa1314070 AT1G72520.1 45.165 817 434 10 57 863 114 926 0.0 711
Msa1314070 AT1G17420.1 45.532 817 430 11 57 863 108 919 0.0 707
Msa1314070 AT3G45140.1 41.525 826 440 17 57 863 95 896 0.0 630
Msa1314070 AT3G45140.2 43.268 765 401 15 118 863 4 754 0.0 620
Msa1314070 AT1G67560.1 41.169 821 448 14 64 863 111 917 0.0 600

Find 241 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.155837 8_4:-12519024 Msa1314070:CDS
GGATGTACAGTTTGTGGTTT+TGG 0.220632 8_4:+12520085 None:intergenic
ATAGGACTATACAAGATATT+TGG 0.221810 8_4:+12523239 None:intergenic
GCTAATGTTGCTAAGAAAAT+TGG 0.242674 8_4:+12520663 None:intergenic
TCCACTTTGTTTGCAACTCT+TGG 0.246806 8_4:-12521552 Msa1314070:CDS
TGGAAGTGTTCACTATTTAT+AGG 0.252753 8_4:+12523221 None:intergenic
CTCCAATTGTTCTTTGGTTA+TGG 0.257898 8_4:+12520234 None:intergenic
AACCTCTTGTAGGCCTCTTT+TGG 0.258026 8_4:+12518754 None:intergenic
AAGCTTCCACTATCCTTATA+TGG 0.275665 8_4:-12519059 Msa1314070:CDS
GTTTGGCTCCAATTGTTCTT+TGG 0.278180 8_4:+12520228 None:intergenic
AAAAGTCCAACTGGTATAAT+TGG 0.281075 8_4:-12523021 Msa1314070:CDS
ACCTTAGCTCGTCCAGTTCT+TGG 0.297046 8_4:-12521238 Msa1314070:CDS
GCTTCAACACCTTCCTTTGC+AGG 0.298053 8_4:+12519880 None:intergenic
TATATACCTTGAACCACTTT+AGG 0.298418 8_4:+12520577 None:intergenic
CTTCTTTGCAAACCTCTTGT+AGG 0.305149 8_4:+12518744 None:intergenic
ATGCTGAACTCCAAGCATTC+TGG 0.312313 8_4:-12519164 Msa1314070:CDS
CTTTAGGTGGTGAAAACTTA+AGG 0.316360 8_4:+12520593 None:intergenic
TTGTGGCTTGCTCACTTCTA+TGG 0.318428 8_4:+12523201 None:intergenic
CTTCGGATGGACTAGAGATA+TGG 0.335175 8_4:-12519257 Msa1314070:CDS
GAAGAATTGAAGACTTTAAG+AGG 0.337498 8_4:-12521346 Msa1314070:CDS
TGCTCTTAGTTGGTCGGTTA+AGG 0.344383 8_4:+12518977 None:intergenic
CCACTTTGTTTGCAACTCTT+GGG 0.353215 8_4:-12521551 Msa1314070:CDS
GTGCTGAAGCAATCCATATA+AGG 0.363595 8_4:+12519046 None:intergenic
TTGTTCTTTGGTTATGGTGC+TGG 0.371597 8_4:+12520240 None:intergenic
TGTCCAAATGATTCATCTCT+TGG 0.371710 8_4:+12520829 None:intergenic
AGTGGGAAAGCAAACATTCT+TGG 0.371915 8_4:-12521749 Msa1314070:CDS
GCCGCTCCGACTCTCGCTCT+TGG 0.373945 8_4:+12520864 None:intergenic
ACAGTGACTCCACCCATGTT+TGG 0.374853 8_4:+12520211 None:intergenic
CACCATAACCAAAGAACAAT+TGG 0.380872 8_4:-12520236 Msa1314070:CDS
TTGTCTTCAAATATGCCTTC+TGG 0.381692 8_4:+12518899 None:intergenic
TGCTGTTGCATATAGGGATT+GGG 0.383203 8_4:-12519499 Msa1314070:CDS
CTGTTTGTTGCTATGATGAA+TGG 0.384081 8_4:+12519675 None:intergenic
GGCAGTGACATGGGAATTCC+AGG 0.387155 8_4:-12521658 Msa1314070:CDS
ACATAGGAGGATGAGGGAAT+TGG 0.389179 8_4:+12518512 None:intergenic
CTCCCAAGAGATGAATCATT+TGG 0.389264 8_4:-12520832 Msa1314070:CDS
GGTGTCATTGGTGGTGCCTT+TGG 0.390401 8_4:-12522997 Msa1314070:CDS
TTACGATGTATACAATGATT+TGG 0.392319 8_4:-12521281 Msa1314070:CDS
GACACTGCTACTGCCTTCTT+AGG 0.392995 8_4:-12522955 Msa1314070:CDS
TTTAGGTGGTGAAAACTTAA+GGG 0.393850 8_4:+12520594 None:intergenic
CCTTGACAAGACCTCTATAA+TGG 0.394018 8_4:+12518843 None:intergenic
GGCAAGTAAACTTCACTAAC+AGG 0.399642 8_4:+12519901 None:intergenic
TGAGTATGCCGAGCTTTCTA+AGG 0.407307 8_4:-12518926 Msa1314070:CDS
CTATCTAGCTTGCTCTTATG+TGG 0.408277 8_4:+12520283 None:intergenic
GAATTACAGGTATCATCAAC+AGG 0.408943 8_4:-12523116 Msa1314070:CDS
GTCAATCCCTCCTCACTAGA+AGG 0.412661 8_4:+12518625 None:intergenic
GGAGACAAACAAAATGCTTT+CGG 0.413236 8_4:-12521697 Msa1314070:CDS
CCGCTCCGACTCTCGCTCTT+GGG 0.421450 8_4:+12520865 None:intergenic
TCAATTTAAGAGCCACATTA+CGG 0.427186 8_4:+12522932 None:intergenic
TTCTAGATGGAGACACTGTT+GGG 0.428529 8_4:+12518589 None:intergenic
AAGGTGTTGAAGCTTCAATT+TGG 0.430358 8_4:-12519870 Msa1314070:CDS
GTGCTTGATCCTCCAAGAAC+TGG 0.430664 8_4:+12521226 None:intergenic
GTTCCGTGAACAATGGTATT+GGG 0.431028 8_4:+12520641 None:intergenic
CTGCTGTTGCATATAGGGAT+TGG 0.432338 8_4:-12519500 Msa1314070:CDS
TACGATGTATACAATGATTT+GGG 0.432606 8_4:-12521280 Msa1314070:CDS
TGATGGAACTTTGAAGCCAT+TGG 0.439270 8_4:-12519968 Msa1314070:CDS
TTGAAGACTTTAAGAGGAGA+TGG 0.440165 8_4:-12521340 Msa1314070:CDS
CAAGTTCCTTCCAGAATGCT+TGG 0.443210 8_4:+12519154 None:intergenic
AGTTCCGTGAACAATGGTAT+TGG 0.444609 8_4:+12520640 None:intergenic
AATGTCTGCTGTTGCATATA+GGG 0.446769 8_4:-12519505 Msa1314070:CDS
GATCAAGGATGTACAGTTTG+TGG 0.447406 8_4:+12520079 None:intergenic
AGATGGAAAAGGAGAGCGTA+AGG 0.452420 8_4:-12521323 Msa1314070:CDS
AAATGTCTGCTGTTGCATAT+AGG 0.453778 8_4:-12519506 Msa1314070:CDS
CATCCTCAAGGTGATAGTTA+TGG 0.453880 8_4:-12519925 Msa1314070:CDS
AGAGAATTGAAGGTGATCTC+TGG 0.456616 8_4:-12518792 Msa1314070:CDS
AGGAAGTGGAAAAGGAAAAG+TGG 0.456842 8_4:-12521767 Msa1314070:CDS
GGGTGGAGTCACTGTAGAAC+AGG 0.457644 8_4:-12520203 Msa1314070:intron
TTCCCTCATCCTCCTATGTA+TGG 0.459050 8_4:-12518508 Msa1314070:three_prime_UTR
TTCTCAATATAGAATGCTCC+TGG 0.468006 8_4:+12521640 None:intergenic
GCTAAGGTAGGTTTCTTGTC+AGG 0.469546 8_4:+12521253 None:intergenic
GGTATAATTGGTGGTGTCAT+TGG 0.470106 8_4:-12523009 Msa1314070:CDS
TTTGTTAACTATAGATGTAA+AGG 0.472776 8_4:+12520744 None:intergenic
GAAGGATAAAGCAGAGTGTA+TGG 0.473368 8_4:+12518643 None:intergenic
TATAGAATCAACATTCTTGT+GGG 0.474612 8_4:-12519544 Msa1314070:CDS
CTTGTGGGGAGGATATGCTT+TGG 0.475216 8_4:-12519529 Msa1314070:CDS
TACTCAGGTGATCCTTTCTC+AGG 0.475325 8_4:+12518943 None:intergenic
CTTTATCCTTCTAGTGAGGA+GGG 0.475679 8_4:-12518631 Msa1314070:CDS
TCACCACCTAAAGTGGTTCA+AGG 0.476967 8_4:-12520583 Msa1314070:intron
ACAAGACCTCTATAATGGTT+AGG 0.478153 8_4:+12518848 None:intergenic
GTCCAAATGATTCATCTCTT+GGG 0.480975 8_4:+12520830 None:intergenic
TCATCCTCCTATGTATGGTA+TGG 0.481272 8_4:-12518503 Msa1314070:three_prime_UTR
GTCTGTAAGAGTATCACTCT+TGG 0.481701 8_4:+12518870 None:intergenic
TTTGTCTCCCAATGTTGGTA+TGG 0.481893 8_4:+12521711 None:intergenic
AAGTGGATGGATCCATGGTT+TGG 0.482572 8_4:+12521568 None:intergenic
AAGGATAGTCCTCGATCAAA+AGG 0.482758 8_4:+12519283 None:intergenic
TATCATCAACAGGGGTGAAA+AGG 0.486464 8_4:-12523106 Msa1314070:CDS
TTTGCAAGGGAGATGATAGC+TGG 0.487147 8_4:-12520435 Msa1314070:CDS
ATTACCTCCATACCAACATT+GGG 0.492615 8_4:-12521718 Msa1314070:CDS
CGAATGCCGTGTGGTGAAGC+TGG 0.494132 8_4:+12519306 None:intergenic
AATGGAGCCGGTGTTTCACT+TGG 0.495288 8_4:+12521385 None:intergenic
GTTTGTATCTTGTAGTGTGA+TGG 0.495937 8_4:-12518418 Msa1314070:three_prime_UTR
TAGCCCAATACCATTGTTCA+CGG 0.497063 8_4:-12520644 Msa1314070:CDS
AAGTGAAACACCGGCTCCAT+TGG 0.497782 8_4:-12521383 Msa1314070:CDS
ATCACCAACTTGTTAGCCAT+TGG 0.498325 8_4:-12519807 Msa1314070:intron
AAAAGGAGAGCGTAAGGAAT+GGG 0.499065 8_4:-12521317 Msa1314070:CDS
AGCAATCCATATAAGGATAG+TGG 0.499294 8_4:+12519053 None:intergenic
ACATAGTATATCCATATTTG+AGG 0.499644 8_4:-12520050 Msa1314070:CDS
ATTTGTGTAGGAAGTGGAAA+AGG 0.499814 8_4:-12521775 Msa1314070:intron
TACCTAATGACCTACTCAAA+AGG 0.499982 8_4:-12519458 Msa1314070:intron
AAAGAAGCTGGCTGAAATTG+AGG 0.500992 8_4:-12518728 Msa1314070:CDS
TTTCTAGATGGAGACACTGT+TGG 0.501431 8_4:+12518588 None:intergenic
ATACTATGTCATAGTGATCA+AGG 0.502253 8_4:+12520064 None:intergenic
TCTGTAAGAGTATCACTCTT+GGG 0.504525 8_4:+12518871 None:intergenic
CATACCAATGGCTAACAAGT+TGG 0.505159 8_4:+12519803 None:intergenic
TACCTCGGTGAGAGAATTGA+AGG 0.505960 8_4:-12518802 Msa1314070:CDS
TAACTATCACCTTGAGGATG+TGG 0.506614 8_4:+12519928 None:intergenic
TCTAGTCCATCCGAAGCATA+AGG 0.507661 8_4:+12519264 None:intergenic
AGTGAGGAAGTAAAAGTTTG+TGG 0.511271 8_4:+12519628 None:intergenic
CTCCTATGTATGGTATGGTA+TGG 0.511410 8_4:-12518498 Msa1314070:three_prime_UTR
AATAAATGCAACTGAGACAA+AGG 0.512896 8_4:-12520025 Msa1314070:CDS
TTAGCTCGTCCAGTTCTTGG+AGG 0.513722 8_4:-12521235 Msa1314070:CDS
GGAAGTAAAAGTTTGTGGAC+AGG 0.514738 8_4:+12519633 None:intergenic
GCTTTATCCTTCTAGTGAGG+AGG 0.514941 8_4:-12518632 Msa1314070:CDS
ACTGCAGCTAAAAGTCCAAC+TGG 0.518205 8_4:-12523030 Msa1314070:CDS
TCCAAGAACTGGACGAGCTA+AGG 0.518285 8_4:+12521237 None:intergenic
TTCTGATGCACAGCCAAAAG+AGG 0.519376 8_4:-12518767 Msa1314070:CDS
CGAGGACTATCCTTATGCTT+CGG 0.520322 8_4:-12519274 Msa1314070:CDS
AGGAGATTCATGCCTGAGAA+AGG 0.521841 8_4:-12518955 Msa1314070:CDS
ACTTTAAGAGGAGATGGAAA+AGG 0.522057 8_4:-12521334 Msa1314070:CDS
AGAACAATTGGAGCCAAACA+TGG 0.523003 8_4:-12520224 Msa1314070:CDS
TTCGGATGGACTAGAGATAT+GGG 0.523115 8_4:-12519256 Msa1314070:CDS
CTGTAGTACACCAATGGAGC+CGG 0.524613 8_4:+12521373 None:intergenic
TATCTAGCTTGCTCTTATGT+GGG 0.526156 8_4:+12520284 None:intergenic
AGAGTGTATGGCATCTTCAC+AGG 0.527638 8_4:+12518655 None:intergenic
ATGAATCTCCTGCTCTTAGT+TGG 0.532018 8_4:+12518967 None:intergenic
GGTGGTGCCTTTGGTGCCGT+TGG 0.533284 8_4:-12522988 Msa1314070:CDS
TATTACCTCCATACCAACAT+TGG 0.534021 8_4:-12521719 Msa1314070:CDS
ATCTCCTGCTCTTAGTTGGT+CGG 0.534361 8_4:+12518971 None:intergenic
CTGGTAGTCCTTAGAAAGCT+CGG 0.537690 8_4:+12518918 None:intergenic
GACTATCCTTATGCTTCGGA+TGG 0.537763 8_4:-12519270 Msa1314070:CDS
ATGTGGCTTACTTAGCTCAA+TGG 0.540595 8_4:+12519945 None:intergenic
TTATAGAATCAACATTCTTG+TGG 0.541753 8_4:-12519545 Msa1314070:CDS
GCATCTTCACAGGCCCGTAT+CGG 0.542185 8_4:+12518665 None:intergenic
GGAAGTGGAAAAGGAAAAGT+GGG 0.542323 8_4:-12521766 Msa1314070:CDS
TCTTCTCTGTAGTACACCAA+TGG 0.542889 8_4:+12521367 None:intergenic
AGTCCAACTGGTATAATTGG+TGG 0.542978 8_4:-12523018 Msa1314070:CDS
AGTCGTTGAGAAACCGATAC+GGG 0.543043 8_4:-12518678 Msa1314070:CDS
CAAGAGGTTTGCAAAGAAGC+TGG 0.543086 8_4:-12518740 Msa1314070:CDS
TTAGAAAGCTCGGCATACTC+AGG 0.543959 8_4:+12518928 None:intergenic
GAAAAGGAGAGCGTAAGGAA+TGG 0.544678 8_4:-12521318 Msa1314070:CDS
AGCCACATTACGGCCTAAGA+AGG 0.547942 8_4:+12522942 None:intergenic
CTGGAAGGAACTTGTAGAGG+TGG 0.550168 8_4:-12519145 Msa1314070:CDS
GTCATTAGGTAGTCCTTGCT+CGG 0.550834 8_4:+12519470 None:intergenic
TTAACTATAGATGTAAAGGA+AGG 0.552577 8_4:+12520748 None:intergenic
AACAGTACCAACGGCACCAA+AGG 0.553356 8_4:+12522981 None:intergenic
AAACAAAGTGGATGGATCCA+TGG 0.554216 8_4:+12521563 None:intergenic
TTAAGGATGTATCCTCCGTA+TGG 0.554548 8_4:+12518994 None:intergenic
CACATTGCCTTACCCTCGAA+GGG 0.554944 8_4:-12521206 Msa1314070:CDS
AAGGATGGTTCTAGCAGCAT+AGG 0.558462 8_4:+12520002 None:intergenic
TTTGAATGGGGCAGTGACAT+GGG 0.560208 8_4:-12521667 Msa1314070:CDS
GTGCGGTCGCTTTACGATGG+TGG 0.560314 8_4:-12520700 Msa1314070:CDS
ATACCTTGAACCACTTTAGG+TGG 0.560948 8_4:+12520580 None:intergenic
AGAGTTGCAAACAAAGTGGA+TGG 0.562947 8_4:+12521555 None:intergenic
ATACCATACATAGGAGGATG+AGG 0.564182 8_4:+12518505 None:intergenic
TTACTTAGCTCAATGGCCAA+TGG 0.564309 8_4:+12519952 None:intergenic
GTTTACTTGCCTGCAAAGGA+AGG 0.565852 8_4:-12519889 Msa1314070:CDS
GCTGCTATCAAGACATGGGT+TGG 0.566416 8_4:-12519234 Msa1314070:CDS
ACACCACCAATTATACCAGT+TGG 0.567092 8_4:+12523015 None:intergenic
TTGCAAGGGAGATGATAGCT+GGG 0.571779 8_4:-12520434 Msa1314070:CDS
GTCTCCCAATGTTGGTATGG+AGG 0.572486 8_4:+12521714 None:intergenic
ATAATTGGTGGTGTCATTGG+TGG 0.572623 8_4:-12523006 Msa1314070:CDS
CCCAAGAGTTGCAAACAAAG+TGG 0.574729 8_4:+12521551 None:intergenic
GAGTTCAGCATCTTGTGCAA+TGG 0.576291 8_4:+12519176 None:intergenic
GAGCCGGTGTTTCACTTGGA+AGG 0.583942 8_4:+12521389 None:intergenic
GCACATTGCCTTACCCTCGA+AGG 0.584595 8_4:-12521207 Msa1314070:CDS
TGAAGTTTACTTGCCTGCAA+AGG 0.587786 8_4:-12519893 Msa1314070:CDS
TGAACATAAATTCACTTGCA+CGG 0.588635 8_4:-12519593 Msa1314070:CDS
CAACAGGGGTGAAAAGGTGA+AGG 0.589126 8_4:-12523100 Msa1314070:CDS
GCTATGAATAAAATATGAGA+AGG 0.591546 8_4:-12518538 Msa1314070:three_prime_UTR
TGAAAAGGTGAAGGGAACTG+TGG 0.592564 8_4:-12523091 Msa1314070:CDS
TTCATTGTGTCACGGTAGTG+AGG 0.593389 8_4:+12519612 None:intergenic
TACAGACCTAACCATTATAG+AGG 0.595780 8_4:-12518854 Msa1314070:CDS
GAACTTGTAGAGGTGGGTCA+TGG 0.597001 8_4:-12519138 Msa1314070:CDS
CTTGAAGATGTTCCAAACCA+TGG 0.598553 8_4:-12521580 Msa1314070:CDS
AATGTCCTCGTCAATGCTGA+GGG 0.605066 8_4:-12519570 Msa1314070:CDS
GGAAAGCAAACATTCTTGGA+AGG 0.606371 8_4:-12521745 Msa1314070:CDS
TGGAAGGAACTTGTAGAGGT+GGG 0.607381 8_4:-12519144 Msa1314070:CDS
TAAGGATGTATCCTCCGTAT+GGG 0.608797 8_4:+12518995 None:intergenic
CTTCAAGTGTCAAACTCACA+AGG 0.609629 8_4:+12521596 None:intergenic
GAATGTCCTCGTCAATGCTG+AGG 0.612356 8_4:-12519571 Msa1314070:CDS
GAGTCGTTGAGAAACCGATA+CGG 0.614237 8_4:-12518679 Msa1314070:CDS
CCCAAGAGCGAGAGTCGGAG+CGG 0.614644 8_4:-12520865 Msa1314070:CDS
GAGAGCGTAAGGAATGGGAT+AGG 0.615866 8_4:-12521312 Msa1314070:CDS
GACTGATGAGGAATTTGCAA+GGG 0.616647 8_4:-12520448 Msa1314070:CDS
TTAACCGACCAACTAAGAGC+AGG 0.616853 8_4:-12518975 Msa1314070:CDS
GAATCAACATTCTTGTGGGG+AGG 0.618267 8_4:-12519540 Msa1314070:CDS
GAAGTAAAAGTTTGTGGACA+GGG 0.618495 8_4:+12519634 None:intergenic
GACCATACCATACCATACAT+AGG 0.619324 8_4:+12518496 None:intergenic
TATGGGCTGCTATCAAGACA+TGG 0.620662 8_4:-12519239 Msa1314070:CDS
CTAAGTAAGCCACATCCTCA+AGG 0.621068 8_4:-12519937 Msa1314070:CDS
TTAACAACTTTGAAGATGTG+CGG 0.623339 8_4:-12520717 Msa1314070:CDS
AATTTATGTTCATTGTGTCA+CGG 0.625058 8_4:+12519604 None:intergenic
ATGCAGAGGAGTGGCTGTTG+AGG 0.626699 8_4:-12519331 Msa1314070:intron
GAGGAGGGATTGACTTGCAG+AGG 0.627031 8_4:-12518616 Msa1314070:CDS
AATGGCTAACAAGTTGGTGA+TGG 0.635140 8_4:+12519809 None:intergenic
TGCCTTCTTAGGCCGTAATG+TGG 0.637588 8_4:-12522944 Msa1314070:CDS
ATTAGTGCTACAAGTGCTGA+TGG 0.637786 8_4:-12522910 Msa1314070:intron
CAATTGGAGCCAAACATGGG+TGG 0.638849 8_4:-12520220 Msa1314070:CDS
ATTCTGGAAGGAACTTGTAG+AGG 0.640924 8_4:-12519148 Msa1314070:CDS
CAGATCCCAAGAGCGAGAGT+CGG 0.642003 8_4:-12520870 Msa1314070:CDS
CAAATGATTCATCTCTTGGG+AGG 0.643818 8_4:+12520833 None:intergenic
GAGGATCCAGCTTCACCACA+CGG 0.645678 8_4:-12519312 Msa1314070:CDS
GTTTAAGATGCAAACTCGTG+CGG 0.646505 8_4:-12519091 Msa1314070:CDS
AACAAACAGACACCTTAGCA+CGG 0.647155 8_4:-12519661 Msa1314070:CDS
TTCCGCATGGATGACTGATG+AGG 0.647438 8_4:-12520460 Msa1314070:CDS
ATACCTTCCAAGTGAAACAC+CGG 0.647734 8_4:-12521392 Msa1314070:CDS
GAACAATTGGAGCCAAACAT+GGG 0.649279 8_4:-12520223 Msa1314070:CDS
CATACCATACCATACATAGG+AGG 0.650354 8_4:+12518499 None:intergenic
TCTGCTTTATCCTTCTAGTG+AGG 0.651182 8_4:-12518635 Msa1314070:CDS
GAACAGTCGATCATTCCGCA+TGG 0.651523 8_4:-12520473 Msa1314070:intron
GCTTTCTAAGGACTACCAGA+AGG 0.651718 8_4:-12518914 Msa1314070:CDS
AGAACTGGACGAGCTAAGGT+AGG 0.651992 8_4:+12521241 None:intergenic
TCTCCATCTAGAAAATGTCA+TGG 0.652269 8_4:-12518579 Msa1314070:exon
ATAGAATCAACATTCTTGTG+GGG 0.652432 8_4:-12519543 Msa1314070:CDS
GGACAGGGTGAACCGTGCTA+AGG 0.653368 8_4:+12519649 None:intergenic
TGACTGATGAGGAATTTGCA+AGG 0.653672 8_4:-12520449 Msa1314070:CDS
TACCATACATAGGAGGATGA+GGG 0.654633 8_4:+12518506 None:intergenic
CCATTATAGAGGTCTTGTCA+AGG 0.656211 8_4:-12518843 Msa1314070:CDS
TGAACTCCAAGCATTCTGGA+AGG 0.658488 8_4:-12519160 Msa1314070:CDS
TTGCATGTTATGCAGAGGAG+TGG 0.665310 8_4:-12519340 Msa1314070:intron
ATGGGCTGCTATCAAGACAT+GGG 0.667186 8_4:-12519238 Msa1314070:CDS
GCTTCTGATGAGCAATACCT+CGG 0.671229 8_4:-12518817 Msa1314070:CDS
AGCCAAAAGAGGCCTACAAG+AGG 0.672549 8_4:-12518756 Msa1314070:CDS
GCTAATGAGAGAAATGCTTG+TGG 0.673858 8_4:+12523184 None:intergenic
AACAGGGGTGAAAAGGTGAA+GGG 0.675330 8_4:-12523099 Msa1314070:CDS
CACACTACAAGATACAAACA+TGG 0.677149 8_4:+12518422 None:intergenic
GGTCCATAACTATCACCTTG+AGG 0.678263 8_4:+12519922 None:intergenic
ATGTTGCTAAGAAAATTGGT+AGG 0.679667 8_4:+12520667 None:intergenic
AGTGTCAAGAACAGTACCAA+CGG 0.683449 8_4:+12522972 None:intergenic
CATTGCCTTACCCTCGAAGG+GGG 0.686147 8_4:-12521204 Msa1314070:CDS
ATCAAAAGGCGAATGCCGTG+TGG 0.686390 8_4:+12519297 None:intergenic
TTTGGACAATACCCATACGG+AGG 0.692591 8_4:-12519006 Msa1314070:CDS
ACATTGCCTTACCCTCGAAG+GGG 0.696289 8_4:-12521205 Msa1314070:CDS
AATTACAGGTATCATCAACA+GGG 0.698441 8_4:-12523115 Msa1314070:CDS
TGCAAGGGAGATGATAGCTG+GGG 0.703696 8_4:-12520433 Msa1314070:CDS
TAATACCCTCAGCATTGACG+AGG 0.709803 8_4:+12519565 None:intergenic
TTGCATCTTAAACCACCATG+TGG 0.713418 8_4:+12519101 None:intergenic
CACCTTCAATTCTCTCACCG+AGG 0.715647 8_4:+12518800 None:intergenic
TTCCTCATCAGTCATCCATG+CGG 0.722940 8_4:+12520458 None:intergenic
ATTACAGGTATCATCAACAG+GGG 0.742437 8_4:-12523114 Msa1314070:CDS
GTGACTTGAAGAATGCCACA+TGG 0.754424 8_4:-12519116 Msa1314070:CDS
ACTTGAAGAATGCCACATGG+TGG 0.754590 8_4:-12519113 Msa1314070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTATATTGTTTTTAATT+TGG + chr8_4:12518399-12518418 None:intergenic 10.0%
!!! AAAAAAGTTAAATATGTTTT+TGG - chr8_4:12519173-12519192 Msa1314070:CDS 10.0%
!!! TAAATTATATTTTGTTGATT+AGG - chr8_4:12521446-12521465 Msa1314070:intron 10.0%
!!! TCATTTTAGCATAAATTAAT+GGG + chr8_4:12518864-12518883 None:intergenic 15.0%
!!! TTCATTTTAGCATAAATTAA+TGG + chr8_4:12518865-12518884 None:intergenic 15.0%
!!! AACAAAGATTTTTTTTTTGA+AGG - chr8_4:12519069-12519088 Msa1314070:CDS 15.0%
!! AATAAATAAAATAAGCCATT+TGG - chr8_4:12519117-12519136 Msa1314070:CDS 15.0%
!! TAATTGATTATCAATTATAG+AGG + chr8_4:12519580-12519599 None:intergenic 15.0%
!!! TTATTTATTTTCCTCAAATA+TGG + chr8_4:12519663-12519682 None:intergenic 15.0%
!! GGAAAATAAATAAATTTAGT+AGG - chr8_4:12519670-12519689 Msa1314070:CDS 15.0%
!! ACCATAAATAGAAAATATTT+GGG + chr8_4:12520618-12520637 None:intergenic 15.0%
!! AACCATAAATAGAAAATATT+TGG + chr8_4:12520619-12520638 None:intergenic 15.0%
!!! CAATATGTTATTTCTATAAT+TGG - chr8_4:12521216-12521235 Msa1314070:CDS 15.0%
!! AACAAAATATAATTTAGTCA+TGG + chr8_4:12521442-12521461 None:intergenic 15.0%
!!! ATAATAATTTTATTTCCAGT+AGG - chr8_4:12523251-12523270 Msa1314070:five_prime_UTR 15.0%
!!! TGAATGTCATTATTTTTTTG+AGG - chr8_4:12518881-12518900 Msa1314070:CDS 20.0%
!!! GAATGTCATTATTTTTTTGA+GGG - chr8_4:12518882-12518901 Msa1314070:CDS 20.0%
!!! AGAATACTAATTTTACCAAA+TGG + chr8_4:12519135-12519154 None:intergenic 20.0%
!!! ATCTTTTAGAAATATTTGAG+AGG + chr8_4:12519314-12519333 None:intergenic 20.0%
!!! TAGTTAATAAAAAGGTTTTC+TGG + chr8_4:12519348-12519367 None:intergenic 20.0%
!! GTCTCATTTAGTTAATAAAA+AGG + chr8_4:12519356-12519375 None:intergenic 20.0%
!! TACTGATAAGTGAAATAATT+TGG + chr8_4:12519627-12519646 None:intergenic 20.0%
!!! ATTCATTTTGAAATTTGTGT+AGG - chr8_4:12519771-12519790 Msa1314070:intron 20.0%
!!! AATATTTTAGTTAGAAGAGA+AGG + chr8_4:12520414-12520433 None:intergenic 20.0%
!! TGTTAAATAGAGTTGTTTAA+TGG - chr8_4:12520513-12520532 Msa1314070:intron 20.0%
!!! TCCCAAATATTTTCTATTTA+TGG - chr8_4:12520614-12520633 Msa1314070:CDS 20.0%
!! TTTGTTAACTATAGATGTAA+AGG + chr8_4:12520817-12520836 None:intergenic 20.0%
!! ATGTATATATTGATAGAACT+AGG + chr8_4:12521020-12521039 None:intergenic 20.0%
!!! TTAATGTTTTTCTAGAGAAA+TGG - chr8_4:12521393-12521412 Msa1314070:CDS 20.0%
!!! ATTTTGAGAAAATGCAATTA+TGG - chr8_4:12523190-12523209 Msa1314070:five_prime_UTR 20.0%
! ATAGGACTATACAAGATATT+TGG + chr8_4:12518322-12518341 None:intergenic 25.0%
!! AAAGTAGCAAAAATGTTTTC+AGG - chr8_4:12518420-12518439 Msa1314070:three_prime_UTR 25.0%
!!! AAAATGTTTTCAGGAATTAC+AGG - chr8_4:12518429-12518448 Msa1314070:three_prime_UTR 25.0%
! AATTCTACCATCTAATTAGT+AGG - chr8_4:12518984-12519003 Msa1314070:CDS 25.0%
!!! CATAGTGCTATTATTTCTTT+TGG + chr8_4:12519023-12519042 None:intergenic 25.0%
! AAAGAAATAATAGCACTATG+TGG - chr8_4:12519023-12519042 Msa1314070:CDS 25.0%
!!! GATTTTTTTTTTGAAGGAAG+CGG - chr8_4:12519075-12519094 Msa1314070:CDS 25.0%
!! TTTCGGTATTCATTTTGAAT+GGG - chr8_4:12519878-12519897 Msa1314070:CDS 25.0%
! TTACGATGTATACAATGATT+TGG - chr8_4:12520277-12520296 Msa1314070:CDS 25.0%
! TACGATGTATACAATGATTT+GGG - chr8_4:12520278-12520297 Msa1314070:CDS 25.0%
!! TTCTACTTAGATGTTTTCAA+TGG - chr8_4:12520451-12520470 Msa1314070:CDS 25.0%
! TTAACTATAGATGTAAAGGA+AGG + chr8_4:12520813-12520832 None:intergenic 25.0%
! ACACATCATCAAAAAACTTA+CGG - chr8_4:12521155-12521174 Msa1314070:intron 25.0%
! TTGCTTGATACAATTAATTC+AGG - chr8_4:12521247-12521266 Msa1314070:CDS 25.0%
!!! GGTTCATTTTTATTCAAATG+AGG - chr8_4:12521414-12521433 Msa1314070:intron 25.0%
! ACATAGTATATCCATATTTG+AGG - chr8_4:12521508-12521527 Msa1314070:CDS 25.0%
!!! GCATTTATTTTCCTCAAATA+TGG + chr8_4:12521522-12521541 None:intergenic 25.0%
! ATTAACGAAATTCATACCAA+TGG + chr8_4:12521770-12521789 None:intergenic 25.0%
! GACATTAATAAATAACTCAC+AGG + chr8_4:12521824-12521843 None:intergenic 25.0%
! AATTTATGTTCATTGTGTCA+CGG + chr8_4:12521957-12521976 None:intergenic 25.0%
! TTATAGAATCAACATTCTTG+TGG - chr8_4:12522013-12522032 Msa1314070:intron 25.0%
! TATAGAATCAACATTCTTGT+GGG - chr8_4:12522014-12522033 Msa1314070:intron 25.0%
!!! GATCCTATGTTTTTTCATAA+TGG - chr8_4:12522141-12522160 Msa1314070:intron 25.0%
! TCTCCATTATGAAAAAACAT+AGG + chr8_4:12522147-12522166 None:intergenic 25.0%
! GCTATGAATAAAATATGAGA+AGG - chr8_4:12523020-12523039 Msa1314070:CDS 25.0%
!! TGGAAGTGTTCACTATTTAT+AGG + chr8_4:12518340-12518359 None:intergenic 30.0%
AATTACAGGTATCATCAACA+GGG - chr8_4:12518443-12518462 Msa1314070:three_prime_UTR 30.0%
GTTGATGCAAAAAAATGTGT+TGG - chr8_4:12518491-12518510 Msa1314070:three_prime_UTR 30.0%
AAAAGTCCAACTGGTATAAT+TGG - chr8_4:12518537-12518556 Msa1314070:three_prime_UTR 30.0%
TCAATTTAAGAGCCACATTA+CGG + chr8_4:12518629-12518648 None:intergenic 30.0%
ACATAGTCCTACTAATTAGA+TGG + chr8_4:12518994-12519013 None:intergenic 30.0%
ACATATAGTTAGAGCTCATA+AGG + chr8_4:12519536-12519555 None:intergenic 30.0%
! TTTGAAATTTGTGTAGGAAG+TGG - chr8_4:12519777-12519796 Msa1314070:intron 30.0%
! CTTTCGGTATTCATTTTGAA+TGG - chr8_4:12519877-12519896 Msa1314070:CDS 30.0%
! TTCGGTATTCATTTTGAATG+GGG - chr8_4:12519879-12519898 Msa1314070:CDS 30.0%
GAAGAATTGAAGACTTTAAG+AGG - chr8_4:12520212-12520231 Msa1314070:CDS 30.0%
!!! AAGGTTTAACCTTTTTTTGC+TGG + chr8_4:12520395-12520414 None:intergenic 30.0%
!!! CAAGTTTTAGATAGACTTCA+AGG + chr8_4:12520541-12520560 None:intergenic 30.0%
! CTTGAAGTCTATCTAAAACT+TGG - chr8_4:12520539-12520558 Msa1314070:intron 30.0%
! TAGCATAGAGCAAAACATTT+TGG - chr8_4:12520568-12520587 Msa1314070:intron 30.0%
! AGCATAGAGCAAAACATTTT+GGG - chr8_4:12520569-12520588 Msa1314070:intron 30.0%
! TTAACAACTTTGAAGATGTG+CGG - chr8_4:12520841-12520860 Msa1314070:CDS 30.0%
ATGTTGCTAAGAAAATTGGT+AGG + chr8_4:12520894-12520913 None:intergenic 30.0%
GCTAATGTTGCTAAGAAAAT+TGG + chr8_4:12520898-12520917 None:intergenic 30.0%
TTTAGGTGGTGAAAACTTAA+GGG + chr8_4:12520967-12520986 None:intergenic 30.0%
TATATACCTTGAACCACTTT+AGG + chr8_4:12520984-12521003 None:intergenic 30.0%
TACCAGAGAAATAAAGTTCA+TGG - chr8_4:12521041-12521060 Msa1314070:intron 30.0%
! ATCCATGAACTTTATTTCTC+TGG + chr8_4:12521046-12521065 None:intergenic 30.0%
!!! GTAAGTTTTTTGATGATGTG+TGG + chr8_4:12521156-12521175 None:intergenic 30.0%
AAGCTAGATAGCCAAAAATA+TGG - chr8_4:12521287-12521306 Msa1314070:CDS 30.0%
!!! TGGTGTTATCTCCATATTTT+TGG + chr8_4:12521301-12521320 None:intergenic 30.0%
ATACTATGTCATAGTGATCA+AGG + chr8_4:12521497-12521516 None:intergenic 30.0%
AATAAATGCAACTGAGACAA+AGG - chr8_4:12521533-12521552 Msa1314070:CDS 30.0%
! ATCATTTTGCAAGAAAAGGA+TGG + chr8_4:12521574-12521593 None:intergenic 30.0%
! ATCCTTTTCTTGCAAAATGA+TGG - chr8_4:12521573-12521592 Msa1314070:CDS 30.0%
! TTCCATCATTTTGCAAGAAA+AGG + chr8_4:12521578-12521597 None:intergenic 30.0%
TTAATGTCTACATGTATGAC+AGG - chr8_4:12521836-12521855 Msa1314070:intron 30.0%
TGAACATAAATTCACTTGCA+CGG - chr8_4:12521965-12521984 Msa1314070:intron 30.0%
ATAGAATCAACATTCTTGTG+GGG - chr8_4:12522015-12522034 Msa1314070:intron 30.0%
!! TGTAACATTACCTTTTGAGT+AGG + chr8_4:12522113-12522132 None:intergenic 30.0%
! AATTTTGGACAATACCCATA+CGG - chr8_4:12522549-12522568 Msa1314070:intron 30.0%
! AAACCATGACATTTTCTAGA+TGG + chr8_4:12522985-12523004 None:intergenic 30.0%
AGTAGAAAAACAATTCCTAC+TGG + chr8_4:12523269-12523288 None:intergenic 30.0%
GAATTACAGGTATCATCAAC+AGG - chr8_4:12518442-12518461 Msa1314070:three_prime_UTR 35.0%
ATTACAGGTATCATCAACAG+GGG - chr8_4:12518444-12518463 Msa1314070:three_prime_UTR 35.0%
TGTGAAATTGTGAGATGACA+TGG - chr8_4:12519463-12519482 Msa1314070:CDS 35.0%
ATAGTTAGAGCTCATAAGGT+GGG + chr8_4:12519532-12519551 None:intergenic 35.0%
TATAGTTAGAGCTCATAAGG+TGG + chr8_4:12519533-12519552 None:intergenic 35.0%
TTATAGAGGTTACTGATGCT+GGG + chr8_4:12519566-12519585 None:intergenic 35.0%
ATTATAGAGGTTACTGATGC+TGG + chr8_4:12519567-12519586 None:intergenic 35.0%
ACTCAGTGTATCCATATTTG+AGG - chr8_4:12519649-12519668 Msa1314070:CDS 35.0%
ATTTGTGTAGGAAGTGGAAA+AGG - chr8_4:12519783-12519802 Msa1314070:intron 35.0%
TATTACCTCCATACCAACAT+TGG - chr8_4:12519839-12519858 Msa1314070:CDS 35.0%
ATTACCTCCATACCAACATT+GGG - chr8_4:12519840-12519859 Msa1314070:CDS 35.0%
!! TTTTGTTTGTCTCCCAATGT+TGG + chr8_4:12519855-12519874 None:intergenic 35.0%
GGAGACAAACAAAATGCTTT+CGG - chr8_4:12519861-12519880 Msa1314070:CDS 35.0%
TTCTCAATATAGAATGCTCC+TGG + chr8_4:12519921-12519940 None:intergenic 35.0%
! TTGAAGACTTTAAGAGGAGA+TGG - chr8_4:12520218-12520237 Msa1314070:CDS 35.0%
! ACTTTAAGAGGAGATGGAAA+AGG - chr8_4:12520224-12520243 Msa1314070:CDS 35.0%
! GCATAGAGCAAAACATTTTG+GGG - chr8_4:12520570-12520589 Msa1314070:intron 35.0%
GTCCAAATGATTCATCTCTT+GGG + chr8_4:12520731-12520750 None:intergenic 35.0%
TGTCCAAATGATTCATCTCT+TGG + chr8_4:12520732-12520751 None:intergenic 35.0%
CTTTAGGTGGTGAAAACTTA+AGG + chr8_4:12520968-12520987 None:intergenic 35.0%
! TAAGTTTTCACCACCTAAAG+TGG - chr8_4:12520968-12520987 Msa1314070:intron 35.0%
!! TATCTAGCTTGCTCTTATGT+GGG + chr8_4:12521277-12521296 None:intergenic 35.0%
CACCATAACCAAAGAACAAT+TGG - chr8_4:12521322-12521341 Msa1314070:CDS 35.0%
CTCCAATTGTTCTTTGGTTA+TGG + chr8_4:12521327-12521346 None:intergenic 35.0%
!! AAGGTGTTGAAGCTTCAATT+TGG - chr8_4:12521688-12521707 Msa1314070:CDS 35.0%
! CTGTTTGTTGCTATGATGAA+TGG + chr8_4:12521886-12521905 None:intergenic 35.0%
GAAGTAAAAGTTTGTGGACA+GGG + chr8_4:12521927-12521946 None:intergenic 35.0%
AGTGAGGAAGTAAAAGTTTG+TGG + chr8_4:12521933-12521952 None:intergenic 35.0%
AAATGTCTGCTGTTGCATAT+AGG - chr8_4:12522052-12522071 Msa1314070:intron 35.0%
AATGTCTGCTGTTGCATATA+GGG - chr8_4:12522053-12522072 Msa1314070:intron 35.0%
TACCTAATGACCTACTCAAA+AGG - chr8_4:12522100-12522119 Msa1314070:intron 35.0%
!! TACCTTTTGAGTAGGTCATT+AGG + chr8_4:12522105-12522124 None:intergenic 35.0%
ATACTTTGCATGTTATGCAG+AGG - chr8_4:12522213-12522232 Msa1314070:intron 35.0%
AAGCTTCCACTATCCTTATA+TGG - chr8_4:12522499-12522518 Msa1314070:intron 35.0%
AGCAATCCATATAAGGATAG+TGG + chr8_4:12522508-12522527 None:intergenic 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - chr8_4:12522534-12522553 Msa1314070:intron 35.0%
TTGTCTTCAAATATGCCTTC+TGG + chr8_4:12522662-12522681 None:intergenic 35.0%
!! TCTGTAAGAGTATCACTCTT+GGG + chr8_4:12522690-12522709 None:intergenic 35.0%
TACAGACCTAACCATTATAG+AGG - chr8_4:12522704-12522723 Msa1314070:intron 35.0%
ACAAGACCTCTATAATGGTT+AGG + chr8_4:12522713-12522732 None:intergenic 35.0%
TCTCCATCTAGAAAATGTCA+TGG - chr8_4:12522979-12522998 Msa1314070:CDS 35.0%
CACACTACAAGATACAAACA+TGG + chr8_4:12523139-12523158 None:intergenic 35.0%
GTTTGTATCTTGTAGTGTGA+TGG - chr8_4:12523140-12523159 Msa1314070:exon 35.0%
GCTAATGAGAGAAATGCTTG+TGG + chr8_4:12518377-12518396 None:intergenic 40.0%
TATCATCAACAGGGGTGAAA+AGG - chr8_4:12518452-12518471 Msa1314070:three_prime_UTR 40.0%
AGTCCAACTGGTATAATTGG+TGG - chr8_4:12518540-12518559 Msa1314070:three_prime_UTR 40.0%
ACACCACCAATTATACCAGT+TGG + chr8_4:12518546-12518565 None:intergenic 40.0%
!! GGTATAATTGGTGGTGTCAT+TGG - chr8_4:12518549-12518568 Msa1314070:three_prime_UTR 40.0%
!! ATAATTGGTGGTGTCATTGG+TGG - chr8_4:12518552-12518571 Msa1314070:three_prime_UTR 40.0%
AGTGTCAAGAACAGTACCAA+CGG + chr8_4:12518589-12518608 None:intergenic 40.0%
!! ATTAGTGCTACAAGTGCTGA+TGG - chr8_4:12518648-12518667 Msa1314070:CDS 40.0%
!! TCAGAGTGCTTTTGCCTTTT+AGG - chr8_4:12519270-12519289 Msa1314070:CDS 40.0%
GAAATTGTGAGATGACATGG+TGG - chr8_4:12519466-12519485 Msa1314070:CDS 40.0%
TAGTTAGAGCTCATAAGGTG+GGG + chr8_4:12519531-12519550 None:intergenic 40.0%
TATAGAGGTTACTGATGCTG+GGG + chr8_4:12519565-12519584 None:intergenic 40.0%
AGGAAGTGGAAAAGGAAAAG+TGG - chr8_4:12519791-12519810 Msa1314070:intron 40.0%
GGAAGTGGAAAAGGAAAAGT+GGG - chr8_4:12519792-12519811 Msa1314070:intron 40.0%
AGTGGGAAAGCAAACATTCT+TGG - chr8_4:12519809-12519828 Msa1314070:CDS 40.0%
GGAAAGCAAACATTCTTGGA+AGG - chr8_4:12519813-12519832 Msa1314070:CDS 40.0%
TTTGTCTCCCAATGTTGGTA+TGG + chr8_4:12519850-12519869 None:intergenic 40.0%
CTTCAAGTGTCAAACTCACA+AGG + chr8_4:12519965-12519984 None:intergenic 40.0%
CTTGAAGATGTTCCAAACCA+TGG - chr8_4:12519978-12519997 Msa1314070:CDS 40.0%
AAACAAAGTGGATGGATCCA+TGG + chr8_4:12519998-12520017 None:intergenic 40.0%
AGAGTTGCAAACAAAGTGGA+TGG + chr8_4:12520006-12520025 None:intergenic 40.0%
! TCCACTTTGTTTGCAACTCT+TGG - chr8_4:12520006-12520025 Msa1314070:CDS 40.0%
! CCACTTTGTTTGCAACTCTT+GGG - chr8_4:12520007-12520026 Msa1314070:CDS 40.0%
CCTTGTTAGCGAAAAAGATG+CGG + chr8_4:12520061-12520080 None:intergenic 40.0%
ATACCTTCCAAGTGAAACAC+CGG - chr8_4:12520166-12520185 Msa1314070:intron 40.0%
TCTTCTCTGTAGTACACCAA+TGG + chr8_4:12520194-12520213 None:intergenic 40.0%
! AAAAGGAGAGCGTAAGGAAT+GGG - chr8_4:12520241-12520260 Msa1314070:CDS 40.0%
GGCAGAAAACCAGCAAAAAA+AGG - chr8_4:12520383-12520402 Msa1314070:intron 40.0%
CAAATGATTCATCTCTTGGG+AGG + chr8_4:12520728-12520747 None:intergenic 40.0%
CTCCCAAGAGATGAATCATT+TGG - chr8_4:12520726-12520745 Msa1314070:CDS 40.0%
TAGCCCAATACCATTGTTCA+CGG - chr8_4:12520914-12520933 Msa1314070:intron 40.0%
GTTCCGTGAACAATGGTATT+GGG + chr8_4:12520920-12520939 None:intergenic 40.0%
AGTTCCGTGAACAATGGTAT+TGG + chr8_4:12520921-12520940 None:intergenic 40.0%
CGAAAAAGTTCCGTGAACAA+TGG + chr8_4:12520927-12520946 None:intergenic 40.0%
!!! ACGGAACTTTTTCGATCTGA+TGG - chr8_4:12520933-12520952 Msa1314070:intron 40.0%
ATACCTTGAACCACTTTAGG+TGG + chr8_4:12520981-12521000 None:intergenic 40.0%
TGACTGATGAGGAATTTGCA+AGG - chr8_4:12521109-12521128 Msa1314070:intron 40.0%
GACTGATGAGGAATTTGCAA+GGG - chr8_4:12521110-12521129 Msa1314070:intron 40.0%
!! CTATCTAGCTTGCTCTTATG+TGG + chr8_4:12521278-12521297 None:intergenic 40.0%
TTGTTCTTTGGTTATGGTGC+TGG + chr8_4:12521321-12521340 None:intergenic 40.0%
! GTTTGGCTCCAATTGTTCTT+TGG + chr8_4:12521333-12521352 None:intergenic 40.0%
AGAACAATTGGAGCCAAACA+TGG - chr8_4:12521334-12521353 Msa1314070:CDS 40.0%
GAACAATTGGAGCCAAACAT+GGG - chr8_4:12521335-12521354 Msa1314070:CDS 40.0%
! GGATGTACAGTTTGTGGTTT+TGG + chr8_4:12521476-12521495 None:intergenic 40.0%
GATCAAGGATGTACAGTTTG+TGG + chr8_4:12521482-12521501 None:intergenic 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8_4:12521590-12521609 Msa1314070:CDS 40.0%
TTACTTAGCTCAATGGCCAA+TGG + chr8_4:12521609-12521628 None:intergenic 40.0%
ATGTGGCTTACTTAGCTCAA+TGG + chr8_4:12521616-12521635 None:intergenic 40.0%
TAACTATCACCTTGAGGATG+TGG + chr8_4:12521633-12521652 None:intergenic 40.0%
CATCCTCAAGGTGATAGTTA+TGG - chr8_4:12521633-12521652 Msa1314070:CDS 40.0%
GGCAAGTAAACTTCACTAAC+AGG + chr8_4:12521660-12521679 None:intergenic 40.0%
TGAAGTTTACTTGCCTGCAA+AGG - chr8_4:12521665-12521684 Msa1314070:CDS 40.0%
!! AATGGCTAACAAGTTGGTGA+TGG + chr8_4:12521752-12521771 None:intergenic 40.0%
!! ATCACCAACTTGTTAGCCAT+TGG - chr8_4:12521751-12521770 Msa1314070:CDS 40.0%
CATACCAATGGCTAACAAGT+TGG + chr8_4:12521758-12521777 None:intergenic 40.0%
AACAAACAGACACCTTAGCA+CGG - chr8_4:12521897-12521916 Msa1314070:intron 40.0%
GGAAGTAAAAGTTTGTGGAC+AGG + chr8_4:12521928-12521947 None:intergenic 40.0%
TGCTGTTGCATATAGGGATT+GGG - chr8_4:12522059-12522078 Msa1314070:intron 40.0%
AAGGATAGTCCTCGATCAAA+AGG + chr8_4:12522278-12522297 None:intergenic 40.0%
!! TTCGGATGGACTAGAGATAT+GGG - chr8_4:12522302-12522321 Msa1314070:intron 40.0%
! ATTCTGGAAGGAACTTGTAG+AGG - chr8_4:12522410-12522429 Msa1314070:intron 40.0%
TTGCATCTTAAACCACCATG+TGG + chr8_4:12522460-12522479 None:intergenic 40.0%
! GTTTAAGATGCAAACTCGTG+CGG - chr8_4:12522467-12522486 Msa1314070:intron 40.0%
GTGCTGAAGCAATCCATATA+AGG + chr8_4:12522515-12522534 None:intergenic 40.0%
TAAGGATGTATCCTCCGTAT+GGG + chr8_4:12522566-12522585 None:intergenic 40.0%
TTAAGGATGTATCCTCCGTA+TGG + chr8_4:12522567-12522586 None:intergenic 40.0%
ATGAATCTCCTGCTCTTAGT+TGG + chr8_4:12522594-12522613 None:intergenic 40.0%
!! GTCTGTAAGAGTATCACTCT+TGG + chr8_4:12522691-12522710 None:intergenic 40.0%
CCTTGACAAGACCTCTATAA+TGG + chr8_4:12522718-12522737 None:intergenic 40.0%
! CCATTATAGAGGTCTTGTCA+AGG - chr8_4:12522715-12522734 Msa1314070:intron 40.0%
CTTCTTTGCAAACCTCTTGT+AGG + chr8_4:12522817-12522836 None:intergenic 40.0%
AAAGAAGCTGGCTGAAATTG+AGG - chr8_4:12522830-12522849 Msa1314070:intron 40.0%
GAAGGATAAAGCAGAGTGTA+TGG + chr8_4:12522918-12522937 None:intergenic 40.0%
TCTGCTTTATCCTTCTAGTG+AGG - chr8_4:12522923-12522942 Msa1314070:CDS 40.0%
CTTTATCCTTCTAGTGAGGA+GGG - chr8_4:12522927-12522946 Msa1314070:CDS 40.0%
TTCTAGATGGAGACACTGTT+GGG + chr8_4:12522972-12522991 None:intergenic 40.0%
TTTCTAGATGGAGACACTGT+TGG + chr8_4:12522973-12522992 None:intergenic 40.0%
TACCATACATAGGAGGATGA+GGG + chr8_4:12523055-12523074 None:intergenic 40.0%
ATACCATACATAGGAGGATG+AGG + chr8_4:12523056-12523075 None:intergenic 40.0%
TCATCCTCCTATGTATGGTA+TGG - chr8_4:12523055-12523074 Msa1314070:CDS 40.0%
CATACCATACCATACATAGG+AGG + chr8_4:12523062-12523081 None:intergenic 40.0%
CTCCTATGTATGGTATGGTA+TGG - chr8_4:12523060-12523079 Msa1314070:CDS 40.0%
GACCATACCATACCATACAT+AGG + chr8_4:12523065-12523084 None:intergenic 40.0%
!! TTGTGGCTTGCTCACTTCTA+TGG + chr8_4:12518360-12518379 None:intergenic 45.0%
AACAGGGGTGAAAAGGTGAA+GGG - chr8_4:12518459-12518478 Msa1314070:three_prime_UTR 45.0%
TGAAAAGGTGAAGGGAACTG+TGG - chr8_4:12518467-12518486 Msa1314070:three_prime_UTR 45.0%
ACTGCAGCTAAAAGTCCAAC+TGG - chr8_4:12518528-12518547 Msa1314070:three_prime_UTR 45.0%
AAGGAAGCGGTGAACAAAGA+TGG - chr8_4:12519088-12519107 Msa1314070:CDS 45.0%
!! TGCTTTTGCCTTTTAGGTCC+TGG - chr8_4:12519276-12519295 Msa1314070:CDS 45.0%
AGTTAGAGCTCATAAGGTGG+GGG + chr8_4:12519530-12519549 None:intergenic 45.0%
ATAGAGGTTACTGATGCTGG+GGG + chr8_4:12519564-12519583 None:intergenic 45.0%
! TTTTGAATGGGGCAGTGACA+TGG - chr8_4:12519890-12519909 Msa1314070:CDS 45.0%
TTTGAATGGGGCAGTGACAT+GGG - chr8_4:12519891-12519910 Msa1314070:CDS 45.0%
AAGTGGATGGATCCATGGTT+TGG + chr8_4:12519993-12520012 None:intergenic 45.0%
CCCAAGAGTTGCAAACAAAG+TGG + chr8_4:12520010-12520029 None:intergenic 45.0%
!! CCGCATCTTTTTCGCTAACA+AGG - chr8_4:12520058-12520077 Msa1314070:CDS 45.0%
! AGATGGAAAAGGAGAGCGTA+AGG - chr8_4:12520235-12520254 Msa1314070:CDS 45.0%
! GAAAAGGAGAGCGTAAGGAA+TGG - chr8_4:12520240-12520259 Msa1314070:CDS 45.0%
GCTAAGGTAGGTTTCTTGTC+AGG + chr8_4:12520308-12520327 None:intergenic 45.0%
TCACCACCTAAAGTGGTTCA+AGG - chr8_4:12520975-12520994 Msa1314070:intron 45.0%
TTCCTCATCAGTCATCCATG+CGG + chr8_4:12521103-12521122 None:intergenic 45.0%
TTTGCAAGGGAGATGATAGC+TGG - chr8_4:12521123-12521142 Msa1314070:intron 45.0%
TTGCAAGGGAGATGATAGCT+GGG - chr8_4:12521124-12521143 Msa1314070:intron 45.0%
!! AAGGATGGTTCTAGCAGCAT+AGG + chr8_4:12521559-12521578 None:intergenic 45.0%
CTAAGTAAGCCACATCCTCA+AGG - chr8_4:12521621-12521640 Msa1314070:CDS 45.0%
GGTCCATAACTATCACCTTG+AGG + chr8_4:12521639-12521658 None:intergenic 45.0%
GTTTACTTGCCTGCAAAGGA+AGG - chr8_4:12521669-12521688 Msa1314070:CDS 45.0%
TTCATTGTGTCACGGTAGTG+AGG + chr8_4:12521949-12521968 None:intergenic 45.0%
AATGTCCTCGTCAATGCTGA+GGG - chr8_4:12521988-12522007 Msa1314070:intron 45.0%
!! TAATACCCTCAGCATTGACG+AGG + chr8_4:12521996-12522015 None:intergenic 45.0%
GAATCAACATTCTTGTGGGG+AGG - chr8_4:12522018-12522037 Msa1314070:intron 45.0%
CTGCTGTTGCATATAGGGAT+TGG - chr8_4:12522058-12522077 Msa1314070:intron 45.0%
GTCATTAGGTAGTCCTTGCT+CGG + chr8_4:12522091-12522110 None:intergenic 45.0%
TTGCATGTTATGCAGAGGAG+TGG - chr8_4:12522218-12522237 Msa1314070:intron 45.0%
CGAGGACTATCCTTATGCTT+CGG - chr8_4:12522284-12522303 Msa1314070:intron 45.0%
GACTATCCTTATGCTTCGGA+TGG - chr8_4:12522288-12522307 Msa1314070:intron 45.0%
TCTAGTCCATCCGAAGCATA+AGG + chr8_4:12522297-12522316 None:intergenic 45.0%
!! CTTCGGATGGACTAGAGATA+TGG - chr8_4:12522301-12522320 Msa1314070:intron 45.0%
! TATGGGCTGCTATCAAGACA+TGG - chr8_4:12522319-12522338 Msa1314070:intron 45.0%
! ATGGGCTGCTATCAAGACAT+GGG - chr8_4:12522320-12522339 Msa1314070:intron 45.0%
GAGTTCAGCATCTTGTGCAA+TGG + chr8_4:12522385-12522404 None:intergenic 45.0%
ATGCTGAACTCCAAGCATTC+TGG - chr8_4:12522394-12522413 Msa1314070:intron 45.0%
TGAACTCCAAGCATTCTGGA+AGG - chr8_4:12522398-12522417 Msa1314070:intron 45.0%
CAAGTTCCTTCCAGAATGCT+TGG + chr8_4:12522407-12522426 None:intergenic 45.0%
TGGAAGGAACTTGTAGAGGT+GGG - chr8_4:12522414-12522433 Msa1314070:intron 45.0%
GTGACTTGAAGAATGCCACA+TGG - chr8_4:12522442-12522461 Msa1314070:intron 45.0%
ACTTGAAGAATGCCACATGG+TGG - chr8_4:12522445-12522464 Msa1314070:intron 45.0%
TTTGGACAATACCCATACGG+AGG - chr8_4:12522552-12522571 Msa1314070:intron 45.0%
TGCTCTTAGTTGGTCGGTTA+AGG + chr8_4:12522584-12522603 None:intergenic 45.0%
TTAACCGACCAACTAAGAGC+AGG - chr8_4:12522583-12522602 Msa1314070:intron 45.0%
ATCTCCTGCTCTTAGTTGGT+CGG + chr8_4:12522590-12522609 None:intergenic 45.0%
AGGAGATTCATGCCTGAGAA+AGG - chr8_4:12522603-12522622 Msa1314070:intron 45.0%
TACTCAGGTGATCCTTTCTC+AGG + chr8_4:12522618-12522637 None:intergenic 45.0%
TTAGAAAGCTCGGCATACTC+AGG + chr8_4:12522633-12522652 None:intergenic 45.0%
TGAGTATGCCGAGCTTTCTA+AGG - chr8_4:12522632-12522651 Msa1314070:intron 45.0%
CTGGTAGTCCTTAGAAAGCT+CGG + chr8_4:12522643-12522662 None:intergenic 45.0%
! GCTTTCTAAGGACTACCAGA+AGG - chr8_4:12522644-12522663 Msa1314070:intron 45.0%
GCTTCTGATGAGCAATACCT+CGG - chr8_4:12522741-12522760 Msa1314070:intron 45.0%
TTCTGATGCACAGCCAAAAG+AGG - chr8_4:12522791-12522810 Msa1314070:intron 45.0%
! AACCTCTTGTAGGCCTCTTT+TGG + chr8_4:12522807-12522826 None:intergenic 45.0%
CAAGAGGTTTGCAAAGAAGC+TGG - chr8_4:12522818-12522837 Msa1314070:intron 45.0%
GAGTCGTTGAGAAACCGATA+CGG - chr8_4:12522879-12522898 Msa1314070:intron 45.0%
AGTCGTTGAGAAACCGATAC+GGG - chr8_4:12522880-12522899 Msa1314070:intron 45.0%
AGAGTGTATGGCATCTTCAC+AGG + chr8_4:12522906-12522925 None:intergenic 45.0%
GCTTTATCCTTCTAGTGAGG+AGG - chr8_4:12522926-12522945 Msa1314070:CDS 45.0%
ACATAGGAGGATGAGGGAAT+TGG + chr8_4:12523049-12523068 None:intergenic 45.0%
TTCCCTCATCCTCCTATGTA+TGG - chr8_4:12523050-12523069 Msa1314070:CDS 45.0%
CAACAGGGGTGAAAAGGTGA+AGG - chr8_4:12518458-12518477 Msa1314070:three_prime_UTR 50.0%
AACAGTACCAACGGCACCAA+AGG + chr8_4:12518580-12518599 None:intergenic 50.0%
GACACTGCTACTGCCTTCTT+AGG - chr8_4:12518603-12518622 Msa1314070:CDS 50.0%
TGCCTTCTTAGGCCGTAATG+TGG - chr8_4:12518614-12518633 Msa1314070:CDS 50.0%
AGCCACATTACGGCCTAAGA+AGG + chr8_4:12518619-12518638 None:intergenic 50.0%
!! TTGCCTTTTAGGTCCTGGCA+AGG - chr8_4:12519281-12519300 Msa1314070:CDS 50.0%
!! TGCCTTTTAGGTCCTGGCAA+GGG - chr8_4:12519282-12519301 Msa1314070:CDS 50.0%
TAGAGGTTACTGATGCTGGG+GGG + chr8_4:12519563-12519582 None:intergenic 50.0%
GTCTCCCAATGTTGGTATGG+AGG + chr8_4:12519847-12519866 None:intergenic 50.0%
AATGGAGCCGGTGTTTCACT+TGG + chr8_4:12520176-12520195 None:intergenic 50.0%
!! AAGTGAAACACCGGCTCCAT+TGG - chr8_4:12520175-12520194 Msa1314070:intron 50.0%
CTGTAGTACACCAATGGAGC+CGG + chr8_4:12520188-12520207 None:intergenic 50.0%
! GAGAGCGTAAGGAATGGGAT+AGG - chr8_4:12520246-12520265 Msa1314070:CDS 50.0%
AGAACTGGACGAGCTAAGGT+AGG + chr8_4:12520320-12520339 None:intergenic 50.0%
ACCTTAGCTCGTCCAGTTCT+TGG - chr8_4:12520320-12520339 Msa1314070:intron 50.0%
TCCAAGAACTGGACGAGCTA+AGG + chr8_4:12520324-12520343 None:intergenic 50.0%
TTAGCTCGTCCAGTTCTTGG+AGG - chr8_4:12520323-12520342 Msa1314070:intron 50.0%
GTGCTTGATCCTCCAAGAAC+TGG + chr8_4:12520335-12520354 None:intergenic 50.0%
CACATTGCCTTACCCTCGAA+GGG - chr8_4:12520352-12520371 Msa1314070:intron 50.0%
ACATTGCCTTACCCTCGAAG+GGG - chr8_4:12520353-12520372 Msa1314070:intron 50.0%
GAACAGTCGATCATTCCGCA+TGG - chr8_4:12521085-12521104 Msa1314070:intron 50.0%
TTCCGCATGGATGACTGATG+AGG - chr8_4:12521098-12521117 Msa1314070:intron 50.0%
TGCAAGGGAGATGATAGCTG+GGG - chr8_4:12521125-12521144 Msa1314070:intron 50.0%
CAATTGGAGCCAAACATGGG+TGG - chr8_4:12521338-12521357 Msa1314070:CDS 50.0%
ACAGTGACTCCACCCATGTT+TGG + chr8_4:12521350-12521369 None:intergenic 50.0%
GCTTCAACACCTTCCTTTGC+AGG + chr8_4:12521681-12521700 None:intergenic 50.0%
GAATGTCCTCGTCAATGCTG+AGG - chr8_4:12521987-12522006 Msa1314070:intron 50.0%
CTTGTGGGGAGGATATGCTT+TGG - chr8_4:12522029-12522048 Msa1314070:intron 50.0%
! GATTGGGTTTTCACCGAGCA+AGG - chr8_4:12522075-12522094 Msa1314070:intron 50.0%
ATCAAAAGGCGAATGCCGTG+TGG + chr8_4:12522264-12522283 None:intergenic 50.0%
GCTGCTATCAAGACATGGGT+TGG - chr8_4:12522324-12522343 Msa1314070:intron 50.0%
CTGGAAGGAACTTGTAGAGG+TGG - chr8_4:12522413-12522432 Msa1314070:intron 50.0%
GAACTTGTAGAGGTGGGTCA+TGG - chr8_4:12522420-12522439 Msa1314070:intron 50.0%
AGCCAAAAGAGGCCTACAAG+AGG - chr8_4:12522802-12522821 Msa1314070:intron 50.0%
GTCAATCCCTCCTCACTAGA+AGG + chr8_4:12522936-12522955 None:intergenic 50.0%
!! GGTGTCATTGGTGGTGCCTT+TGG - chr8_4:12518561-12518580 Msa1314070:three_prime_UTR 55.0%
AGCCCTTGCCAGGACCTAAA+AGG + chr8_4:12519287-12519306 None:intergenic 55.0%
GAGAGGTTTAAGCCCTTGCC+AGG + chr8_4:12519297-12519316 None:intergenic 55.0%
AGAGGTTACTGATGCTGGGG+GGG + chr8_4:12519562-12519581 None:intergenic 55.0%
GGCAGTGACATGGGAATTCC+AGG - chr8_4:12519900-12519919 Msa1314070:CDS 55.0%
GAGCCGGTGTTTCACTTGGA+AGG + chr8_4:12520172-12520191 None:intergenic 55.0%
GCACATTGCCTTACCCTCGA+AGG - chr8_4:12520351-12520370 Msa1314070:intron 55.0%
CATTGCCTTACCCTCGAAGG+GGG - chr8_4:12520354-12520373 Msa1314070:intron 55.0%
CAGATCCCAAGAGCGAGAGT+CGG - chr8_4:12520688-12520707 Msa1314070:CDS 55.0%
! GATGTGCGGTCGCTTTACGA+TGG - chr8_4:12520855-12520874 Msa1314070:CDS 55.0%
GGGTGGAGTCACTGTAGAAC+AGG - chr8_4:12521355-12521374 Msa1314070:CDS 55.0%
ATGCAGAGGAGTGGCTGTTG+AGG - chr8_4:12522227-12522246 Msa1314070:intron 55.0%
GAGGATCCAGCTTCACCACA+CGG - chr8_4:12522246-12522265 Msa1314070:intron 55.0%
! CGGCATTCGCCTTTTGATCG+AGG - chr8_4:12522266-12522285 Msa1314070:intron 55.0%
GCATCTTCACAGGCCCGTAT+CGG + chr8_4:12522896-12522915 None:intergenic 55.0%
!! GAGGAGGGATTGACTTGCAG+AGG - chr8_4:12522942-12522961 Msa1314070:CDS 55.0%
AGGTTACTGATGCTGGGGGG+GGG + chr8_4:12519560-12519579 None:intergenic 60.0%
GAGGTTACTGATGCTGGGGG+GGG + chr8_4:12519561-12519580 None:intergenic 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG + chr8_4:12520362-12520381 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+AGG - chr8_4:12520362-12520381 Msa1314070:intron 60.0%
TGCCTGTTCTCCCCCTTCGA+GGG + chr8_4:12520367-12520386 None:intergenic 60.0%
! GTGCGGTCGCTTTACGATGG+TGG - chr8_4:12520858-12520877 Msa1314070:CDS 60.0%
GGACAGGGTGAACCGTGCTA+AGG + chr8_4:12521912-12521931 None:intergenic 60.0%
CGAATGCCGTGTGGTGAAGC+TGG + chr8_4:12522255-12522274 None:intergenic 60.0%
!! GGTGGTGCCTTTGGTGCCGT+TGG - chr8_4:12518570-12518589 Msa1314070:three_prime_UTR 65.0%
GGTTACTGATGCTGGGGGGG+GGG + chr8_4:12519559-12519578 None:intergenic 65.0%
CTGCCTGTTCTCCCCCTTCG+AGG + chr8_4:12520368-12520387 None:intergenic 65.0%
CCGCTCCGACTCTCGCTCTT+GGG + chr8_4:12520696-12520715 None:intergenic 65.0%
CCCAAGAGCGAGAGTCGGAG+CGG - chr8_4:12520693-12520712 Msa1314070:CDS 65.0%
GCCGCTCCGACTCTCGCTCT+TGG + chr8_4:12520697-12520716 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 12518269 12523311 12518269 ID=Msa1314070;Name=Msa1314070
chr8_4 mRNA 12518269 12523311 12518269 ID=Msa1314070-mRNA-1;Parent=Msa1314070;Name=Msa1314070-mRNA-1;_AED=0.08;_eAED=0.08;_QI=163|1|1|1|1|1|9|322|863
chr8_4 exon 12518269 12519347 12518269 ID=Msa1314070-mRNA-1:exon:4694;Parent=Msa1314070-mRNA-1
chr8_4 exon 12519459 12519722 12519459 ID=Msa1314070-mRNA-1:exon:4693;Parent=Msa1314070-mRNA-1
chr8_4 exon 12519808 12520112 12519808 ID=Msa1314070-mRNA-1:exon:4692;Parent=Msa1314070-mRNA-1
chr8_4 exon 12520204 12520311 12520204 ID=Msa1314070-mRNA-1:exon:4691;Parent=Msa1314070-mRNA-1
chr8_4 exon 12520404 12520489 12520404 ID=Msa1314070-mRNA-1:exon:4690;Parent=Msa1314070-mRNA-1
chr8_4 exon 12520584 12520889 12520584 ID=Msa1314070-mRNA-1:exon:4689;Parent=Msa1314070-mRNA-1
chr8_4 exon 12521176 12521416 12521176 ID=Msa1314070-mRNA-1:exon:4688;Parent=Msa1314070-mRNA-1
chr8_4 exon 12521501 12521787 12521501 ID=Msa1314070-mRNA-1:exon:4687;Parent=Msa1314070-mRNA-1
chr8_4 exon 12522911 12523311 12522911 ID=Msa1314070-mRNA-1:exon:4686;Parent=Msa1314070-mRNA-1
chr8_4 five_prime_UTR 12523149 12523311 12523149 ID=Msa1314070-mRNA-1:five_prime_utr;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12522911 12523148 12522911 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12521501 12521787 12521501 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12521176 12521416 12521176 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12520584 12520889 12520584 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12520404 12520489 12520404 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12520204 12520311 12520204 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12519808 12520112 12519808 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12519459 12519722 12519459 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 CDS 12518591 12519347 12518591 ID=Msa1314070-mRNA-1:cds;Parent=Msa1314070-mRNA-1
chr8_4 three_prime_UTR 12518269 12518590 12518269 ID=Msa1314070-mRNA-1:three_prime_utr;Parent=Msa1314070-mRNA-1
Gene Sequence

>Msa1314070

ATGTTTTCAGGAATTACAGGTATCATCAACAGGGGTGAAAAGGTGAAGGGAACTGTGGTGTTGATGCAAAAAAATGTGTTGGATATCAATGAACTCACTGCAGCTAAAAGTCCAACTGGTATAATTGGTGGTGTCATTGGTGGTGCCTTTGGTGCCGTTGGTACTGTTCTTGACACTGCTACTGCCTTCTTAGGCCGTAATGTGGCTCTTAAATTGATTAGTGCTACAAGTGCTGATGGAAGTGGAAAAGGAAAAGTGGGAAAGCAAACATTCTTGGAAGGTGTTATTACCTCCATACCAACATTGGGAGACAAACAAAATGCTTTCGGTATTCATTTTGAATGGGGCAGTGACATGGGAATTCCAGGAGCATTCTATATTGAGAATTTTTTGCAACATGAGTTCTTCCTTGTGAGTTTGACACTTGAAGATGTTCCAAACCATGGATCCATCCACTTTGTTTGCAACTCTTGGGTCTACAATGACAAAAAATATAAAAGTGACCGCATCTTTTTCGCTAACAAGACATACCTTCCAAGTGAAACACCGGCTCCATTGGTGTACTACAGAGAAGAAGAATTGAAGACTTTAAGAGGAGATGGAAAAGGAGAGCGTAAGGAATGGGATAGGATCTATGATTACGATGTATACAATGATTTGGGTGAGCCTGACAAGAAACCTACCTTAGCTCGTCCAGTTCTTGGAGGATCAAGCACATTGCCTTACCCTCGAAGGGGGAGAACAGGCAGAAAACCAGCAAAAAAAGATCCCAAGAGCGAGAGTCGGAGCGGCTTTGTTTACCTCCCAAGAGATGAATCATTTGGACACGAAAAGTCTTCAGACTTTCTTGCTTTCATACTCAAATCAGCATCTCAAAGTATCATACCTTCCTTTACATCTATAGTTAACAAAGAGTTTAACAACTTTGAAGATGTGCGGTCGCTTTACGATGGTGGAGTCAAGCTACCTACCAATTTTCTTAGCAACATTAGCCCAATACCATTGTTCACGGAACTTTTTCGATCTGATGGTGCAGCAACCCTTAAGTTTTCACCACCTAAAGTGGTTCAAGTCGATCATTCCGCATGGATGACTGATGAGGAATTTGCAAGGGAGATGATAGCTGGGGTGAATCCACACATCATCAAAAAACTTACGGAGTTCCCACATAAGAGCAAGCTAGATAGCCAAAAATATGGAGATAACACCAGCACCATAACCAAAGAACAATTGGAGCCAAACATGGGTGGAGTCACTGTAGAACAGGCTATCCAAAACCACAAACTGTACATCCTTGATCACTATGACATAGTATATCCATATTTGAGGAAAATAAATGCAACTGAGACAAAGGCCTATGCTGCTAGAACCATCCTTTTCTTGCAAAATGATGGAACTTTGAAGCCATTGGCCATTGAGCTAAGTAAGCCACATCCTCAAGGTGATAGTTATGGACCTGTTAGTGAAGTTTACTTGCCTGCAAAGGAAGGTGTTGAAGCTTCAATTTGGCTTCTTGCTAAAGCTTATGTAGTTGTAAATGACTCGTGCCATCACCAACTTGTTAGCCATTGGTTGAACACTCACGCTGTTGTTGAGCCATTCATCATAGCAACAAACAGACACCTTAGCACGGTTCACCCTGTCCACAAACTTTTACTTCCTCACTACCGTGACACAATGAACATAAATTCACTTGCACGGAATGTCCTCGTCAATGCTGAGGGTATTATAGAATCAACATTCTTGTGGGGAGGATATGCTTTGGAAATGTCTGCTGTTGCATATAGGGATTGGGTTTTCACCGAGCAAGGACTACCTAATGACCTACTCAAAAGAGGAGTGGCTGTTGAGGATCCAGCTTCACCACACGGCATTCGCCTTTTGATCGAGGACTATCCTTATGCTTCGGATGGACTAGAGATATGGGCTGCTATCAAGACATGGGTTGGAGAATATGTGAATTTCTACTACAAATCAGATGCTGCCATTGCACAAGATGCTGAACTCCAAGCATTCTGGAAGGAACTTGTAGAGGTGGGTCATGGTGACTTGAAGAATGCCACATGGTGGTTTAAGATGCAAACTCGTGCGGAGTTGATCGAAGCTTCCACTATCCTTATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATACCCATACGGAGGATACATCCTTAACCGACCAACTAAGAGCAGGAGATTCATGCCTGAGAAAGGATCACCTGAGTATGCCGAGCTTTCTAAGGACTACCAGAAGGCATATTTGAAGACAATCACACCCAAGAGTGATACTCTTACAGACCTAACCATTATAGAGGTCTTGTCAAGGCATGCTTCTGATGAGCAATACCTCGGTGAGAGAATTGAAGGTGATCTCTGGACTTCTGATGCACAGCCAAAAGAGGCCTACAAGAGGTTTGCAAAGAAGCTGGCTGAAATTGAGGAAAAGCTAATTAAAAAGAACGCTGATGAGTCGTTGAGAAACCGATACGGGCCTGTGAAGATGCCATACACTCTGCTTTATCCTTCTAGTGAGGAGGGATTGACTTGCAGAGGTATTCCCAACAGTGTCTCCATCTAG
Protein sequence

>Msa1314070

MFSGITGIINRGEKVKGTVVLMQKNVLDINELTAAKSPTGIIGGVIGGAFGAVGTVLDTATAFLGRNVALKLISATSADGSGKGKVGKQTFLEGVITSIPTLGDKQNAFGIHFEWGSDMGIPGAFYIENFLQHEFFLVSLTLEDVPNHGSIHFVCNSWVYNDKKYKSDRIFFANKTYLPSETPAPLVYYREEELKTLRGDGKGERKEWDRIYDYDVYNDLGEPDKKPTLARPVLGGSSTLPYPRRGRTGRKPAKKDPKSESRSGFVYLPRDESFGHEKSSDFLAFILKSASQSIIPSFTSIVNKEFNNFEDVRSLYDGGVKLPTNFLSNISPIPLFTELFRSDGAATLKFSPPKVVQVDHSAWMTDEEFAREMIAGVNPHIIKKLTEFPHKSKLDSQKYGDNTSTITKEQLEPNMGGVTVEQAIQNHKLYILDHYDIVYPYLRKINATETKAYAARTILFLQNDGTLKPLAIELSKPHPQGDSYGPVSEVYLPAKEGVEASIWLLAKAYVVVNDSCHHQLVSHWLNTHAVVEPFIIATNRHLSTVHPVHKLLLPHYRDTMNINSLARNVLVNAEGIIESTFLWGGYALEMSAVAYRDWVFTEQGLPNDLLKRGVAVEDPASPHGIRLLIEDYPYASDGLEIWAAIKTWVGEYVNFYYKSDAAIAQDAELQAFWKELVEVGHGDLKNATWWFKMQTRAELIEASTILIWIASALHAAVNFGQYPYGGYILNRPTKSRRFMPEKGSPEYAELSKDYQKAYLKTITPKSDTLTDLTIIEVLSRHASDEQYLGERIEGDLWTSDAQPKEAYKRFAKKLAEIEEKLIKKNADESLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSVSI*