Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314090 | XP_013444392.1 | 97.688 | 865 | 20 | 0 | 1 | 865 | 1 | 865 | 0.0 | 1747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314090 | sp|P24095|LOXX_SOYBN | 79.700 | 867 | 171 | 3 | 1 | 865 | 1 | 864 | 0.0 | 1443 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314090 | A0A072TLZ7 | 97.688 | 865 | 20 | 0 | 1 | 865 | 1 | 865 | 0.0 | 1747 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052460 | Msa1314090 | 0.803074 | 4.146888e-49 | -8.615850e-47 |
| Msa1275880 | Msa1314090 | 0.863474 | 2.425583e-64 | -8.615850e-47 |
| Msa1275920 | Msa1314090 | 0.932395 | 9.078892e-95 | -8.615850e-47 |
| Msa1314070 | Msa1314090 | 0.884828 | 1.373588e-71 | -8.615850e-47 |
| Msa1314090 | Msa1314180 | 0.923127 | 3.999067e-89 | -8.615850e-47 |
| Msa1314090 | Msa1355130 | 0.896372 | 3.931199e-76 | -8.615850e-47 |
| Msa1314090 | Msa1379070 | 0.824334 | 8.538397e-54 | -8.615850e-47 |
| Msa1314090 | Msa1379090 | 0.825767 | 3.916228e-54 | -8.615850e-47 |
| Msa0372450 | Msa1314090 | 0.846065 | 2.745086e-59 | -8.615850e-47 |
| Msa0398990 | Msa1314090 | 0.826668 | 2.391005e-54 | -8.615850e-47 |
| Msa0457750 | Msa1314090 | 0.828387 | 9.249063e-55 | -8.615850e-47 |
| Msa0466650 | Msa1314090 | 0.850236 | 1.934720e-60 | -8.615850e-47 |
| Msa1018730 | Msa1314090 | 0.823527 | 1.320146e-53 | -8.615850e-47 |
| Msa0345210 | Msa1314090 | 0.802837 | 4.641302e-49 | -8.615850e-47 |
| Msa0352120 | Msa1314090 | 0.838439 | 2.873276e-57 | -8.615850e-47 |
| Msa1147200 | Msa1314090 | 0.837348 | 5.481957e-57 | -8.615850e-47 |
| Msa1179130 | Msa1314090 | 0.923144 | 3.907953e-89 | -8.615850e-47 |
| Msa1179150 | Msa1314090 | 0.890686 | 7.872801e-74 | -8.615850e-47 |
| Msa1201550 | Msa1314090 | 0.808011 | 3.818606e-50 | -8.615850e-47 |
| Msa0493550 | Msa1314090 | 0.824145 | 9.459789e-54 | -8.615850e-47 |
| Msa0512820 | Msa1314090 | 0.846242 | 2.455925e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314090 | MtrunA17_Chr8g0343031 | 97.688 | 865 | 20 | 0 | 1 | 865 | 1 | 865 | 0.0 | 1747 |
| Msa1314090 | MtrunA17_Chr8g0343021 | 92.254 | 865 | 66 | 1 | 1 | 865 | 1 | 864 | 0.0 | 1667 |
| Msa1314090 | MtrunA17_Chr5g0406871 | 85.582 | 867 | 123 | 2 | 1 | 865 | 1 | 867 | 0.0 | 1553 |
| Msa1314090 | MtrunA17_Chr2g0329901 | 73.963 | 868 | 210 | 7 | 3 | 865 | 7 | 863 | 0.0 | 1319 |
| Msa1314090 | MtrunA17_Chr2g0329911 | 71.792 | 865 | 232 | 4 | 3 | 865 | 7 | 861 | 0.0 | 1285 |
| Msa1314090 | MtrunA17_Chr8g0342881 | 70.746 | 858 | 238 | 5 | 11 | 865 | 9 | 856 | 0.0 | 1265 |
| Msa1314090 | MtrunA17_Chr3g0120071 | 68.239 | 869 | 261 | 8 | 1 | 865 | 1 | 858 | 0.0 | 1213 |
| Msa1314090 | MtrunA17_Chr8g0342971 | 64.821 | 867 | 295 | 8 | 5 | 865 | 8 | 870 | 0.0 | 1176 |
| Msa1314090 | MtrunA17_Chr8g0342951 | 65.899 | 868 | 282 | 6 | 5 | 865 | 8 | 868 | 0.0 | 1172 |
| Msa1314090 | MtrunA17_Chr8g0342921 | 63.825 | 868 | 307 | 6 | 2 | 865 | 5 | 869 | 0.0 | 1162 |
| Msa1314090 | MtrunA17_Chr8g0344211 | 64.120 | 864 | 304 | 5 | 5 | 865 | 8 | 868 | 0.0 | 1158 |
| Msa1314090 | MtrunA17_Chr8g0342891 | 62.831 | 869 | 311 | 7 | 1 | 865 | 1 | 861 | 0.0 | 1156 |
| Msa1314090 | MtrunA17_Chr8g0343011 | 64.434 | 866 | 298 | 5 | 3 | 865 | 7 | 865 | 0.0 | 1153 |
| Msa1314090 | MtrunA17_Chr8g0342931 | 65.779 | 751 | 253 | 4 | 118 | 865 | 1 | 750 | 0.0 | 1059 |
| Msa1314090 | MtrunA17_Chr8g0342901 | 58.076 | 873 | 313 | 12 | 1 | 865 | 1 | 828 | 0.0 | 1031 |
| Msa1314090 | MtrunA17_Chr1g0191921 | 59.101 | 868 | 317 | 9 | 10 | 865 | 17 | 858 | 0.0 | 1026 |
| Msa1314090 | MtrunA17_Chr7g0272791 | 57.175 | 878 | 333 | 12 | 6 | 865 | 15 | 867 | 0.0 | 1000 |
| Msa1314090 | MtrunA17_Chr1g0205611 | 56.036 | 878 | 342 | 10 | 7 | 865 | 4 | 856 | 0.0 | 990 |
| Msa1314090 | MtrunA17_Chr8g0343001 | 55.671 | 864 | 317 | 13 | 7 | 865 | 5 | 807 | 0.0 | 942 |
| Msa1314090 | MtrunA17_Chr8g0342991 | 55.427 | 866 | 316 | 14 | 7 | 865 | 5 | 807 | 0.0 | 937 |
| Msa1314090 | MtrunA17_Chr8g0342981 | 55.664 | 821 | 313 | 14 | 64 | 865 | 35 | 823 | 0.0 | 885 |
| Msa1314090 | MtrunA17_Chr8g0344201 | 46.837 | 822 | 416 | 12 | 56 | 864 | 113 | 926 | 0.0 | 738 |
| Msa1314090 | MtrunA17_Chr8g0377101 | 45.067 | 821 | 420 | 15 | 63 | 865 | 109 | 916 | 0.0 | 686 |
| Msa1314090 | MtrunA17_Chr3g0118651 | 42.212 | 841 | 444 | 14 | 41 | 865 | 89 | 903 | 0.0 | 673 |
| Msa1314090 | MtrunA17_Chr8g0338451 | 43.118 | 821 | 420 | 18 | 55 | 846 | 46 | 848 | 0.0 | 651 |
| Msa1314090 | MtrunA17_Chr3g0118641 | 41.392 | 848 | 452 | 15 | 36 | 865 | 82 | 902 | 0.0 | 651 |
| Msa1314090 | MtrunA17_Chr4g0033171 | 46.968 | 709 | 360 | 10 | 167 | 865 | 23 | 725 | 0.0 | 637 |
| Msa1314090 | MtrunA17_Chr4g0047281 | 39.841 | 881 | 477 | 15 | 1 | 864 | 50 | 894 | 0.0 | 633 |
| Msa1314090 | MtrunA17_Chr3g0118621 | 41.827 | 832 | 461 | 12 | 46 | 865 | 45 | 865 | 0.0 | 615 |
| Msa1314090 | MtrunA17_Chr8g0344241 | 65.012 | 403 | 139 | 2 | 464 | 865 | 60 | 461 | 0.0 | 555 |
| Msa1314090 | MtrunA17_Chr8g0344241 | 45.570 | 79 | 38 | 3 | 282 | 358 | 1 | 76 | 1.25e-11 | 67.8 |
| Msa1314090 | MtrunA17_Chr6g0471951 | 41.860 | 516 | 252 | 8 | 321 | 830 | 11 | 484 | 6.70e-136 | 414 |
| Msa1314090 | MtrunA17_Chr7g0218231 | 58.974 | 117 | 47 | 1 | 520 | 635 | 16 | 132 | 1.75e-40 | 145 |
| Msa1314090 | MtrunA17_Chr6g0468081 | 53.933 | 89 | 40 | 1 | 548 | 635 | 1 | 89 | 1.72e-24 | 98.6 |
| Msa1314090 | MtrunA17_Chr3g0137991 | 40.476 | 126 | 56 | 3 | 742 | 865 | 1 | 109 | 2.19e-19 | 84.3 |
| Msa1314090 | MtrunA17_Chr7g0272781 | 50.000 | 62 | 31 | 0 | 758 | 819 | 8 | 69 | 6.66e-16 | 73.9 |
| Msa1314090 | MtrunA17_Chr2g0277191 | 53.571 | 56 | 26 | 0 | 739 | 794 | 58 | 113 | 6.90e-16 | 74.7 |
| Msa1314090 | MtrunA17_Chr4g0047271 | 42.857 | 91 | 51 | 1 | 775 | 864 | 1 | 91 | 1.25e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314090 | AT1G55020.1 | 57.471 | 870 | 327 | 11 | 10 | 865 | 19 | 859 | 0.0 | 1002 |
| Msa1314090 | AT3G22400.1 | 53.759 | 878 | 358 | 11 | 11 | 865 | 34 | 886 | 0.0 | 953 |
| Msa1314090 | AT1G72520.1 | 45.985 | 822 | 423 | 11 | 56 | 865 | 114 | 926 | 0.0 | 722 |
| Msa1314090 | AT1G17420.1 | 45.833 | 816 | 418 | 13 | 63 | 865 | 115 | 919 | 0.0 | 711 |
| Msa1314090 | AT3G45140.1 | 43.962 | 853 | 436 | 19 | 29 | 865 | 70 | 896 | 0.0 | 673 |
| Msa1314090 | AT3G45140.2 | 46.405 | 765 | 380 | 15 | 117 | 865 | 4 | 754 | 0.0 | 659 |
| Msa1314090 | AT1G67560.1 | 44.000 | 825 | 422 | 15 | 63 | 865 | 111 | 917 | 0.0 | 653 |
Find 216 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAATATGATGCTAATTT+TGG | 0.100125 | 8_4:-12614689 | Msa1314090:CDS |
| TGATGCATTCATGCCATATT+TGG | 0.131415 | 8_4:-12613075 | Msa1314090:CDS |
| TCTTCTCTATAATGATTTAA+TGG | 0.176573 | 8_4:+12614263 | None:intergenic |
| CGGTGCGAAAGATTTCTTTA+AGG | 0.184089 | 8_4:+12613703 | None:intergenic |
| TCTTGAAGTGTTTGCATCTT+AGG | 0.189058 | 8_4:+12612134 | None:intergenic |
| GGAAATAAAAGTTTATTAAT+TGG | 0.191745 | 8_4:+12612656 | None:intergenic |
| GAAGAAATCTCGACTGAATT+TGG | 0.217122 | 8_4:+12612542 | None:intergenic |
| GTTCCAAGAGATGAAAATTT+TGG | 0.231662 | 8_4:-12613924 | Msa1314090:CDS |
| ATAATTTGCTTCCAAACTTT+TGG | 0.232757 | 8_4:+12611787 | None:intergenic |
| TTACGGGGTTCTTAGTTAAT+AGG | 0.246915 | 8_4:-12611380 | Msa1314090:three_prime_UTR |
| CCGTTGATGGACTAGAAATA+TGG | 0.262135 | 8_4:-12612301 | Msa1314090:CDS |
| ATGTTTATCCTCTCCAAATA+TGG | 0.275552 | 8_4:+12613062 | None:intergenic |
| GTGTGTACTACTATTGTATT+TGG | 0.276639 | 8_4:-12611498 | Msa1314090:three_prime_UTR |
| TATTAGGCAAGTTTACTAAA+TGG | 0.281228 | 8_4:-12611163 | Msa1314090:three_prime_UTR |
| AGAAATATGGGATGCTATTA+AGG | 0.290191 | 8_4:-12612288 | Msa1314090:CDS |
| CTTCAATAGTTTACAAGGAT+TGG | 0.300764 | 8_4:-12612523 | Msa1314090:CDS |
| TCGATGTACATCGATGTTAT+TGG | 0.305188 | 8_4:+12611562 | None:intergenic |
| TACTAAGAGTTGGACGGTTC+AGG | 0.315303 | 8_4:+12612021 | None:intergenic |
| TTATGATGTTTATAATGATT+TGG | 0.319374 | 8_4:-12614177 | Msa1314090:CDS |
| AAACTTAATTCAATTGCTAT+TGG | 0.320767 | 8_4:+12612978 | None:intergenic |
| TATGATGTTTATAATGATTT+GGG | 0.329706 | 8_4:-12614176 | Msa1314090:CDS |
| GCACTTGTCCGACCCGTCCT+TGG | 0.331319 | 8_4:-12614134 | Msa1314090:CDS |
| TTCAGTTTATTTGTAACTCA+TGG | 0.332336 | 8_4:-12614574 | Msa1314090:CDS |
| GAGCAGATGTATAATCTATT+AGG | 0.334742 | 8_4:-12611179 | Msa1314090:three_prime_UTR |
| AACTTTGGACAATATCCTTA+TGG | 0.337509 | 8_4:-12612053 | Msa1314090:CDS |
| TTCACCATCTCATCATATTC+CGG | 0.339492 | 8_4:+12611972 | None:intergenic |
| GAGAGAGGAATGACAAGTTT+TGG | 0.340286 | 8_4:-12611839 | Msa1314090:CDS |
| CTCATCTGTTGGATAGTATA+AGG | 0.341593 | 8_4:+12612244 | None:intergenic |
| AAATCTAAAGCTTACATCAT+TGG | 0.341756 | 8_4:+12614508 | None:intergenic |
| ACACCAGGTTTCTCACTCTT+AGG | 0.345400 | 8_4:+12613954 | None:intergenic |
| GTACAGGCCTTCCAAAAGTT+TGG | 0.353077 | 8_4:-12611798 | Msa1314090:CDS |
| TCATCATATTCCGGAGTTCC+TGG | 0.354611 | 8_4:+12611981 | None:intergenic |
| GAAATAAAAGTTTATTAATT+GGG | 0.359057 | 8_4:+12612657 | None:intergenic |
| TTCAATTGCTATTGGTTTCA+AGG | 0.361603 | 8_4:+12612986 | None:intergenic |
| CTAGGACATTAGATTCTTAC+GGG | 0.361718 | 8_4:-12611396 | Msa1314090:three_prime_UTR |
| TGGATGACTGATGAAGAATT+TGG | 0.366017 | 8_4:-12613492 | Msa1314090:CDS |
| GGTGCGAAAGATTTCTTTAA+GGG | 0.366175 | 8_4:+12613704 | None:intergenic |
| GACTCCTCCGATGATATTTC+CGG | 0.366190 | 8_4:+12615254 | None:intergenic |
| TTCAATAGTTTACAAGGATT+GGG | 0.366856 | 8_4:-12612522 | Msa1314090:CDS |
| TGAAGAAGGCGAATCACATT+AGG | 0.368002 | 8_4:+12613444 | None:intergenic |
| CTTTGCTTTCAGAACCGTAT+TGG | 0.370832 | 8_4:+12612937 | None:intergenic |
| TGAAAGTACAATTTGGCTAT+TGG | 0.371059 | 8_4:-12612889 | Msa1314090:CDS |
| GACACTGCCACTGCTTTCTT+AGG | 0.376400 | 8_4:-12615207 | Msa1314090:CDS |
| ACACTAGATACCACTGTCTA+TGG | 0.377248 | 8_4:-12613297 | Msa1314090:CDS |
| ATAATGATGTGTTTGTTGAT+AGG | 0.378144 | 8_4:-12611459 | Msa1314090:three_prime_UTR |
| CATTCATCATAGCAACAAAT+AGG | 0.378633 | 8_4:-12612697 | Msa1314090:CDS |
| TCAATAAGCGTCTGAAACTT+TGG | 0.379241 | 8_4:+12611915 | None:intergenic |
| AATCTTGCTCCATTATCATA+TGG | 0.381472 | 8_4:-12612103 | Msa1314090:CDS |
| TCTACCACAGTTACCAACTT+TGG | 0.386958 | 8_4:-12614741 | Msa1314090:CDS |
| TCTTAGTAGAAGATTTATTC+CGG | 0.393985 | 8_4:-12612006 | Msa1314090:CDS |
| GCCTTTACCGACGGACGTTA+TGG | 0.397612 | 8_4:+12615293 | None:intergenic |
| ATCTTGTTCTTGAAAGATGA+TGG | 0.398972 | 8_4:-12613011 | Msa1314090:CDS |
| CTACCACAGTTACCAACTTT+GGG | 0.399809 | 8_4:-12614740 | Msa1314090:CDS |
| GACTACCCTTATGCCGTTGA+TGG | 0.402058 | 8_4:-12612314 | Msa1314090:CDS |
| TAAGTTTGCCACACTCAAAT+GGG | 0.403015 | 8_4:-12612962 | Msa1314090:CDS |
| TCTAGTCCATCAACGGCATA+AGG | 0.407922 | 8_4:+12612308 | None:intergenic |
| CTTCATGCAGCAGTTAACTT+TGG | 0.412421 | 8_4:-12612068 | Msa1314090:CDS |
| CTCCTTCGTTCAAGTGAAGA+AGG | 0.413433 | 8_4:-12611678 | Msa1314090:CDS |
| GATTTCTTTAAGGGCTGGTA+AGG | 0.418543 | 8_4:+12613713 | None:intergenic |
| TCGAAGCTATCGAACTCATT+TGG | 0.420932 | 8_4:+12613801 | None:intergenic |
| TCTAGGACATTAGATTCTTA+CGG | 0.423762 | 8_4:-12611397 | Msa1314090:three_prime_UTR |
| AAGGTGTTGAAAGTACAATT+TGG | 0.426026 | 8_4:-12612896 | Msa1314090:CDS |
| CTATTTGTTGCTATGATGAA+TGG | 0.428310 | 8_4:+12612698 | None:intergenic |
| TTAAGTTTGCCACACTCAAA+TGG | 0.432308 | 8_4:-12612963 | Msa1314090:CDS |
| TCATCAGACTTCCTTATGTA+TGG | 0.435382 | 8_4:-12613891 | Msa1314090:CDS |
| ATCTCGACTGAATTTGGTCC+TGG | 0.440986 | 8_4:+12612548 | None:intergenic |
| ATGAACTTGATGATTAATCT+AGG | 0.443263 | 8_4:-12611414 | Msa1314090:three_prime_UTR |
| CTTTCAACACCTTGGTCAGC+AGG | 0.446383 | 8_4:+12612906 | None:intergenic |
| CAAGAACAAGATTGTTCTTG+TGG | 0.446508 | 8_4:+12613022 | None:intergenic |
| GGAGGAGTCACCGGCATTGT+TGG | 0.446572 | 8_4:-12615240 | Msa1314090:CDS |
| TTCTAAATAGAGATACTGTT+GGG | 0.452292 | 8_4:+12611636 | None:intergenic |
| ACTCATTTGGTGTGAAATTG+AGG | 0.457560 | 8_4:+12613814 | None:intergenic |
| ACAAGTGCGTCACCACCATC+TGG | 0.458687 | 8_4:+12614149 | None:intergenic |
| TGTGTACTACTATTGTATTT+GGG | 0.461884 | 8_4:-12611497 | Msa1314090:three_prime_UTR |
| AACTGAACCGATTCACGGTT+AGG | 0.465549 | 8_4:+12614590 | None:intergenic |
| AAATAAACTGAACCGATTCA+CGG | 0.466221 | 8_4:+12614585 | None:intergenic |
| GCAAATGGAAAGGGTCTAGT+TGG | 0.468531 | 8_4:-12614788 | Msa1314090:CDS |
| GATTTCTTCAATAGTTTACA+AGG | 0.470122 | 8_4:-12612528 | Msa1314090:CDS |
| TTTGGAAGAGAGATGGTTGC+TGG | 0.470580 | 8_4:-12613474 | Msa1314090:CDS |
| CTATAATGATTTAATGGAGC+CGG | 0.470903 | 8_4:+12614269 | None:intergenic |
| TAATGATGTGTTTGTTGATA+GGG | 0.471909 | 8_4:-12611458 | Msa1314090:three_prime_UTR |
| GTGGAAGGAAGCTGTAGAAA+AGG | 0.472990 | 8_4:-12612189 | Msa1314090:CDS |
| AAAGTGTAGGGCAATTCAAC+TGG | 0.475433 | 8_4:+12611702 | None:intergenic |
| AACTGGAGAGCGCAAAGAAT+CGG | 0.475822 | 8_4:-12614213 | Msa1314090:CDS |
| CGGCATTGTTGGCGGAGTTG+TGG | 0.476699 | 8_4:-12615229 | Msa1314090:CDS |
| TCTTGTCTTGCTCCCAAAGT+TGG | 0.477942 | 8_4:+12614728 | None:intergenic |
| ATCGGATACAAGGGCAGTAC+AGG | 0.479432 | 8_4:-12611814 | Msa1314090:CDS |
| TCAGTTTATTTGTAACTCAT+GGG | 0.479467 | 8_4:-12614573 | Msa1314090:CDS |
| CGAAAGATTTCTTTAAGGGC+TGG | 0.479618 | 8_4:+12613708 | None:intergenic |
| GGTAGAAAACCAACTAGAAA+AGG | 0.479857 | 8_4:-12614071 | Msa1314090:intron |
| CACTCAAATGGGGTCCAATA+CGG | 0.481521 | 8_4:-12612951 | Msa1314090:CDS |
| GAAGAGTTGCAGACTCTAAG+AGG | 0.481668 | 8_4:-12614242 | Msa1314090:CDS |
| ACTCTAAGAGGAGATGGAAC+TGG | 0.481698 | 8_4:-12614230 | Msa1314090:CDS |
| CACAACTCCGCCAACAATGC+CGG | 0.487713 | 8_4:+12615230 | None:intergenic |
| TGAAGCAGTCCATATGATAA+TGG | 0.491962 | 8_4:+12612094 | None:intergenic |
| AATATCATCGGAGGAGTCAC+CGG | 0.493995 | 8_4:-12615249 | Msa1314090:CDS |
| TTTCTTATGTAAAATGCTCC+AGG | 0.494462 | 8_4:+12614662 | None:intergenic |
| TACCTCTTGATAAGATCAGC+TGG | 0.498386 | 8_4:+12612479 | None:intergenic |
| AGAAGATTTATTCCGGAGCC+AGG | 0.498580 | 8_4:-12611999 | Msa1314090:CDS |
| CGTGATACAATAAATATCAA+TGG | 0.500728 | 8_4:-12612626 | Msa1314090:CDS |
| AAATTGAAGGGAAAATCAAC+GGG | 0.501920 | 8_4:-12611761 | Msa1314090:CDS |
| ATAAATCTTCTACTAAGAGT+TGG | 0.503245 | 8_4:+12612011 | None:intergenic |
| TTGCAGACTCTAAGAGGAGA+TGG | 0.503523 | 8_4:-12614236 | Msa1314090:CDS |
| TACAATTTGGCTATTGGCAA+AGG | 0.505352 | 8_4:-12612883 | Msa1314090:CDS |
| AGCAAATTATCTGAAATTGA+AGG | 0.506290 | 8_4:-12611774 | Msa1314090:CDS |
| CTTCTAACCCTGCGAGGGTA+GGG | 0.508695 | 8_4:+12614095 | None:intergenic |
| TTTATTGTATCACGGAAATG+AGG | 0.512453 | 8_4:+12612635 | None:intergenic |
| CATTGATATTTATTGTATCA+CGG | 0.514036 | 8_4:+12612627 | None:intergenic |
| ATTCAGAGGACTTGCTGTTG+AGG | 0.514506 | 8_4:-12612375 | Msa1314090:intron |
| ATCATCAACTCATGAGCCAT+TGG | 0.514587 | 8_4:-12612833 | Msa1314090:intron |
| TTTCTAAATAGAGATACTGT+TGG | 0.515169 | 8_4:+12611635 | None:intergenic |
| AACCTTCTTCACTTGAACGA+AGG | 0.515488 | 8_4:+12611676 | None:intergenic |
| GATGGTGAAAAGTCCTCAAA+AGG | 0.515594 | 8_4:-12611958 | Msa1314090:CDS |
| TTCAGGATATATCCTCCATA+AGG | 0.516837 | 8_4:+12612038 | None:intergenic |
| AGATATTCCTAACCGTGAAT+CGG | 0.517076 | 8_4:-12614597 | Msa1314090:CDS |
| TAGTAGTAGAGAATGAAGCT+TGG | 0.521145 | 8_4:+12615446 | None:intergenic |
| TTATATTCATCTTCACGCGT+TGG | 0.523489 | 8_4:+12611321 | None:intergenic |
| GCACCTATCCCTACCCTCGC+AGG | 0.525837 | 8_4:-12614103 | Msa1314090:CDS |
| CTAGTCCATCAACGGCATAA+GGG | 0.527288 | 8_4:+12612309 | None:intergenic |
| ATTTGGTACATACTTGAAGA+AGG | 0.529002 | 8_4:+12613430 | None:intergenic |
| CGACAATCTCTAATCAATGC+TGG | 0.529247 | 8_4:-12612596 | Msa1314090:CDS |
| TCAACTGCATAGAGACGTTA+CGG | 0.536637 | 8_4:+12615184 | None:intergenic |
| AATGGAGCCGGTGTTTGACT+TGG | 0.537557 | 8_4:+12614281 | None:intergenic |
| GGAGTCACCGGCATTGTTGG+CGG | 0.537869 | 8_4:-12615237 | Msa1314090:CDS |
| AAAGAAATCTTTCGCACCGA+TGG | 0.540424 | 8_4:-12613699 | Msa1314090:CDS |
| CGTTGATGGACTAGAAATAT+GGG | 0.542528 | 8_4:-12612300 | Msa1314090:CDS |
| TATTCCGGAGTTCCTGGCTC+CGG | 0.543972 | 8_4:+12611987 | None:intergenic |
| GATGCAAACACTTCAAGACT+TGG | 0.544651 | 8_4:-12612129 | Msa1314090:CDS |
| TATTCCGGAGCCAGGAACTC+CGG | 0.546745 | 8_4:-12611991 | Msa1314090:CDS |
| TGGAAATGAACTACTCTGCA+TGG | 0.546870 | 8_4:-12611143 | Msa1314090:three_prime_UTR |
| TAAGATCAGCTGGTAATGCT+TGG | 0.548014 | 8_4:+12612489 | None:intergenic |
| ATGCATCATGGTAATCTAAG+AGG | 0.548431 | 8_4:+12613090 | None:intergenic |
| GAAATTGAAGGGAAAATCAA+CGG | 0.551567 | 8_4:-12611762 | Msa1314090:CDS |
| CCTTTGATTACATGAGGTGG+TGG | 0.551689 | 8_4:+12613657 | None:intergenic |
| AATAACACCGCCTTTACCGA+CGG | 0.552475 | 8_4:+12615284 | None:intergenic |
| TGGAAAGGGTCTAGTTGGAA+AGG | 0.553743 | 8_4:-12614783 | Msa1314090:CDS |
| AAATTGTACTTTCAACACCT+TGG | 0.556889 | 8_4:+12612898 | None:intergenic |
| GCAAATTATCTGAAATTGAA+GGG | 0.559063 | 8_4:-12611773 | Msa1314090:CDS |
| ACTTCTAACCCTGCGAGGGT+AGG | 0.563371 | 8_4:+12614094 | None:intergenic |
| TCTTGTTCTTGAAAGATGAT+GGG | 0.563970 | 8_4:-12613010 | Msa1314090:CDS |
| ATGGGATGCTATTAAGGCAT+GGG | 0.568340 | 8_4:-12612282 | Msa1314090:CDS |
| CTTGAGGACTTGTTCACCAT+CGG | 0.571669 | 8_4:+12613683 | None:intergenic |
| ATTTCTTTAAGGGCTGGTAA+GGG | 0.572647 | 8_4:+12613714 | None:intergenic |
| ATCAGCTGGTAATGCTTGGT+CGG | 0.572957 | 8_4:+12612493 | None:intergenic |
| TAACACAAGACGAAGTCCAT+GGG | 0.574013 | 8_4:+12612340 | None:intergenic |
| CTTCAAGAGTCACACTAACA+AGG | 0.574151 | 8_4:+12614618 | None:intergenic |
| TGGAAGGAAGCTGTAGAAAA+GGG | 0.576005 | 8_4:-12612188 | Msa1314090:CDS |
| CTAACACAAGACGAAGTCCA+TGG | 0.577343 | 8_4:+12612339 | None:intergenic |
| TGAACGAAGGAGCAAAGTGT+AGG | 0.579119 | 8_4:+12611689 | None:intergenic |
| AGTATAAGGAGACATAGTCT+TGG | 0.579636 | 8_4:+12612258 | None:intergenic |
| ACTTGTCCGACCCGTCCTTG+GGG | 0.579739 | 8_4:-12614132 | Msa1314090:CDS |
| AACTCCGGAATATGATGAGA+TGG | 0.581138 | 8_4:-12611976 | Msa1314090:CDS |
| GAACGAAGGAGCAAAGTGTA+GGG | 0.581719 | 8_4:+12611690 | None:intergenic |
| AAAATCACTGATTTAAACAA+AGG | 0.585127 | 8_4:+12613840 | None:intergenic |
| CTTGGAACATAAATCACACC+AGG | 0.585857 | 8_4:+12613939 | None:intergenic |
| TGGTGAAATCACAGTAGAAG+AGG | 0.586886 | 8_4:-12613229 | Msa1314090:intron |
| CTTGTCCGACCCGTCCTTGG+GGG | 0.590305 | 8_4:-12614131 | Msa1314090:CDS |
| TATGGGATGCTATTAAGGCA+TGG | 0.595717 | 8_4:-12612283 | Msa1314090:CDS |
| CCACCACCTCATGTAATCAA+AGG | 0.596584 | 8_4:-12613657 | Msa1314090:intron |
| ATCTTCTACTAAGAGTTGGA+CGG | 0.599978 | 8_4:+12612015 | None:intergenic |
| GAGCAGTTAGCAAGTCTGCA+TGG | 0.599984 | 8_4:-12613512 | Msa1314090:intron |
| GGCGGTGTTATTGACACCGC+CGG | 0.600528 | 8_4:-12615273 | Msa1314090:CDS |
| CATTCATGCCATATTTGGAG+AGG | 0.604180 | 8_4:-12613070 | Msa1314090:CDS |
| AATATGGCATGAATGCATCA+TGG | 0.606974 | 8_4:+12613078 | None:intergenic |
| TACCACTTCTAACCCTGCGA+GGG | 0.608273 | 8_4:+12614090 | None:intergenic |
| ATGAGGTGTACCTCGGAGAG+AGG | 0.610201 | 8_4:-12611854 | Msa1314090:CDS |
| CATGAGGTGGTGGAAACTTG+AGG | 0.611673 | 8_4:+12613667 | None:intergenic |
| AATGATTTGGGAAATCCAGA+TGG | 0.614572 | 8_4:-12614164 | Msa1314090:CDS |
| CAGGTTAAATACTCATGCAG+TGG | 0.615445 | 8_4:-12612726 | Msa1314090:CDS |
| CCATATTTCTAGTCCATCAA+CGG | 0.615855 | 8_4:+12612301 | None:intergenic |
| ATAAGTGCTACTAAGACTGA+TGG | 0.616988 | 8_4:-12615162 | Msa1314090:intron |
| GTTTGCATCTTAGGCCACCA+TGG | 0.617328 | 8_4:+12612143 | None:intergenic |
| TACCAGCTGATCTTATCAAG+AGG | 0.619833 | 8_4:-12612481 | Msa1314090:intron |
| CACCTATCCCTACCCTCGCA+GGG | 0.621451 | 8_4:-12614102 | Msa1314090:CDS |
| GAGGATAAACATAAACGCAA+AGG | 0.623153 | 8_4:-12613051 | Msa1314090:CDS |
| GTTTGGCATCTTAAACAACA+AGG | 0.623240 | 8_4:-12615373 | Msa1314090:CDS |
| TGAAGAATTTGGAAGAGAGA+TGG | 0.625232 | 8_4:-12613481 | Msa1314090:CDS |
| GAACACTTAGAGACTAACCT+TGG | 0.626961 | 8_4:-12613249 | Msa1314090:CDS |
| GTATACTTGCCTGCTGACCA+AGG | 0.627379 | 8_4:-12612915 | Msa1314090:CDS |
| TTTGGACAATATCCTTATGG+AGG | 0.629254 | 8_4:-12612050 | Msa1314090:CDS |
| AACCCTGCGAGGGTAGGGAT+AGG | 0.629944 | 8_4:+12614100 | None:intergenic |
| TTCAATGCCATAACGTCCGT+CGG | 0.634724 | 8_4:-12615300 | Msa1314090:CDS |
| GAGGTACCTTTGATTACATG+AGG | 0.637794 | 8_4:+12613651 | None:intergenic |
| GCTTCTGATGAGGTGTACCT+CGG | 0.639827 | 8_4:-12611861 | Msa1314090:CDS |
| GACACCGCCGGAAATATCAT+CGG | 0.641337 | 8_4:-12615261 | Msa1314090:CDS |
| GCTCCCAAAGTTGGTAACTG+TGG | 0.642576 | 8_4:+12614737 | None:intergenic |
| ATTTGACTAAGTATATCTGT+AGG | 0.643284 | 8_4:+12613741 | None:intergenic |
| TATTGGACCCCATTTGAGTG+TGG | 0.645377 | 8_4:+12612954 | None:intergenic |
| CTTATACTATCCAACAGATG+AGG | 0.647524 | 8_4:-12612243 | Msa1314090:CDS |
| AAGTTTGCCACACTCAAATG+GGG | 0.650150 | 8_4:-12612961 | Msa1314090:CDS |
| CTTCTACTGTGATTTCACCA+AGG | 0.652721 | 8_4:+12613232 | None:intergenic |
| ATAACGTCCGTCGGTAAAGG+CGG | 0.654342 | 8_4:-12615291 | Msa1314090:CDS |
| CATCATTGGTGAAGAAGATG+CGG | 0.654380 | 8_4:+12614522 | None:intergenic |
| GAAGCTGTAGAAAAGGGTCA+TGG | 0.659592 | 8_4:-12612182 | Msa1314090:CDS |
| TACCCTCGCAGGGTTAGAAG+TGG | 0.659775 | 8_4:-12614092 | Msa1314090:CDS |
| CTACCACTTCTAACCCTGCG+AGG | 0.666085 | 8_4:+12614089 | None:intergenic |
| CAATCTCTAATCAATGCTGG+TGG | 0.670777 | 8_4:-12612593 | Msa1314090:CDS |
| TTTGGCATCTTAAACAACAA+GGG | 0.672959 | 8_4:-12615372 | Msa1314090:CDS |
| GATCCTAAGAGTGAGAAACC+TGG | 0.675475 | 8_4:-12613957 | Msa1314090:CDS |
| AACACAAGACGAAGTCCATG+GGG | 0.677428 | 8_4:+12612341 | None:intergenic |
| GTATCTTCCAAGTCAAACAC+CGG | 0.681822 | 8_4:-12614288 | Msa1314090:CDS |
| TTGAAGGGAAAATCAACGGG+AGG | 0.682959 | 8_4:-12611758 | Msa1314090:CDS |
| GTACCTTTGATTACATGAGG+TGG | 0.683223 | 8_4:+12613654 | None:intergenic |
| TCCTCCGATGATATTTCCGG+CGG | 0.686578 | 8_4:+12615257 | None:intergenic |
| ACCGCCGGAAATATCATCGG+AGG | 0.686952 | 8_4:-12615258 | Msa1314090:CDS |
| ACTTGAAAGACAAGCCATGG+TGG | 0.687448 | 8_4:-12612157 | Msa1314090:CDS |
| GTCAAGACATGCTTCTGATG+AGG | 0.689418 | 8_4:-12611871 | Msa1314090:CDS |
| GTGACTTGAAAGACAAGCCA+TGG | 0.691001 | 8_4:-12612160 | Msa1314090:CDS |
| CACAAGACGAAGTCCATGGG+GGG | 0.702873 | 8_4:+12612343 | None:intergenic |
| GTTACGGCCTAAGAAAGCAG+TGG | 0.712363 | 8_4:+12615200 | None:intergenic |
| GCAATTCAACTGGTCCAGTG+CGG | 0.715428 | 8_4:+12611712 | None:intergenic |
| ACTTGTCATTCCTCTCTCCG+AGG | 0.722579 | 8_4:+12611844 | None:intergenic |
| TAGGACATTAGATTCTTACG+GGG | 0.723607 | 8_4:-12611395 | Msa1314090:three_prime_UTR |
| GATTTGGGAAATCCAGATGG+TGG | 0.729912 | 8_4:-12614161 | Msa1314090:CDS |
| ACACAAGACGAAGTCCATGG+GGG | 0.743636 | 8_4:+12612342 | None:intergenic |
| AAATGAACTACTCTGCATGG+AGG | 0.778096 | 8_4:-12611140 | Msa1314090:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGATAACAAATAATTTA+TGG | + | chr8_4:12612226-12612245 | None:intergenic | 10.0% |
| !!! | ATAAATTATTTGTTATCATT+AGG | - | chr8_4:12612225-12612244 | Msa1314090:CDS | 10.0% |
| !! | ATATATATTAAGAATACATT+TGG | + | chr8_4:12613168-12613187 | None:intergenic | 10.0% |
| !!! | ATATACTAAAGTTATTTTTT+AGG | + | chr8_4:12613792-12613811 | None:intergenic | 10.0% |
| !! | GATTATTAATATAAAAAATG+GGG | - | chr8_4:12613826-12613845 | Msa1314090:CDS | 10.0% |
| !! | GAAATAAAAGTTTATTAATT+GGG | + | chr8_4:12613924-12613943 | None:intergenic | 10.0% |
| !! | ATTAGTGAAAAATTTATTCT+TGG | + | chr8_4:12611615-12611634 | None:intergenic | 15.0% |
| !! | TAGTGATTATGTTAAATTAT+GGG | - | chr8_4:12611749-12611768 | Msa1314090:CDS | 15.0% |
| !!! | AAGCTTTAGATTTTAAATTA+AGG | - | chr8_4:12612080-12612099 | Msa1314090:CDS | 15.0% |
| !!! | AGCTTTAGATTTTAAATTAA+GGG | - | chr8_4:12612081-12612100 | Msa1314090:CDS | 15.0% |
| !! | AAATATGTTTATATGATTGT+AGG | - | chr8_4:12612106-12612125 | Msa1314090:CDS | 15.0% |
| !! | TTATGATGTTTATAATGATT+TGG | - | chr8_4:12612401-12612420 | Msa1314090:intron | 15.0% |
| !! | TATGATGTTTATAATGATTT+GGG | - | chr8_4:12612402-12612421 | Msa1314090:intron | 15.0% |
| !!! | TGTGATTGAAATTAAATTTT+TGG | - | chr8_4:12613437-12613456 | Msa1314090:intron | 15.0% |
| !! | GGAAATAAAAGTTTATTAAT+TGG | + | chr8_4:12613925-12613944 | None:intergenic | 15.0% |
| !!! | TTGAAATCCAAAACATTTTT+GGG | + | chr8_4:12611263-12611282 | None:intergenic | 20.0% |
| !!! | ATTGAAATCCAAAACATTTT+TGG | + | chr8_4:12611264-12611283 | None:intergenic | 20.0% |
| !! | ATTGGTTAATAATTATGTCT+CGG | + | chr8_4:12611496-12611515 | None:intergenic | 20.0% |
| !! | GCTAGTATATTATTGAATAT+TGG | + | chr8_4:12611514-12611533 | None:intergenic | 20.0% |
| !!! | TTTTTACATGATAGTATTCA+CGG | + | chr8_4:12611567-12611586 | None:intergenic | 20.0% |
| !!! | TGATGTACTTAATTTCTTTT+TGG | - | chr8_4:12611660-12611679 | Msa1314090:CDS | 20.0% |
| !! | TTAACATAATCACTAGAAAA+TGG | + | chr8_4:12611744-12611763 | None:intergenic | 20.0% |
| !! | CTAGTGATTATGTTAAATTA+TGG | - | chr8_4:12611748-12611767 | Msa1314090:CDS | 20.0% |
| !!! | GTTTTTAATTTTGTAGCAAA+TGG | - | chr8_4:12611775-12611794 | Msa1314090:CDS | 20.0% |
| !!! | TTTGAATATGATGCTAATTT+TGG | - | chr8_4:12611889-12611908 | Msa1314090:CDS | 20.0% |
| !! | TCTTCTCTATAATGATTTAA+TGG | + | chr8_4:12612318-12612337 | None:intergenic | 20.0% |
| !!! | AAAATCACTGATTTAAACAA+AGG | + | chr8_4:12612741-12612760 | None:intergenic | 20.0% |
| !! | CATAGAAATATATAAGCATT+GGG | + | chr8_4:12613221-12613240 | None:intergenic | 20.0% |
| !! | ATGTTCAAATTAAAAGTCAT+TGG | - | chr8_4:12613385-12613404 | Msa1314090:intron | 20.0% |
| !!! | TGAAATTAAATTTTTGGAAC+AGG | - | chr8_4:12613443-12613462 | Msa1314090:CDS | 20.0% |
| !! | AAACTTAATTCAATTGCTAT+TGG | + | chr8_4:12613603-12613622 | None:intergenic | 20.0% |
| !! | CATTGATATTTATTGTATCA+CGG | + | chr8_4:12613954-12613973 | None:intergenic | 20.0% |
| ! | AAAAAGTAAGCAAAGATGTT+TGG | - | chr8_4:12611188-12611207 | Msa1314090:three_prime_UTR | 25.0% |
| ! | GAAAAATTTATTCTTGGACT+AGG | + | chr8_4:12611609-12611628 | None:intergenic | 25.0% |
| !! | TAATTTTGTAGCAAATGGAA+AGG | - | chr8_4:12611780-12611799 | Msa1314090:CDS | 25.0% |
| !! | AATTTTGTAGCAAATGGAAA+GGG | - | chr8_4:12611781-12611800 | Msa1314090:CDS | 25.0% |
| ! | TTCAGTTTATTTGTAACTCA+TGG | - | chr8_4:12612004-12612023 | Msa1314090:CDS | 25.0% |
| ! | TCAGTTTATTTGTAACTCAT+GGG | - | chr8_4:12612005-12612024 | Msa1314090:CDS | 25.0% |
| !! | AAATCTAAAGCTTACATCAT+TGG | + | chr8_4:12612073-12612092 | None:intergenic | 25.0% |
| !! | GTGATTTTATTCCATACATA+AGG | + | chr8_4:12612701-12612720 | None:intergenic | 25.0% |
| ! | ATTTGACTAAGTATATCTGT+AGG | + | chr8_4:12612840-12612859 | None:intergenic | 25.0% |
| ! | TAGCTATAATTGAATCGATT+TGG | + | chr8_4:12612959-12612978 | None:intergenic | 25.0% |
| ! | ATGATACTAATTGAGTATAC+AGG | + | chr8_4:12613011-12613030 | None:intergenic | 25.0% |
| ! | GCTCAAAATAATTGTCAAAT+TGG | + | chr8_4:12613050-12613069 | None:intergenic | 25.0% |
| ! | GCATAGAAATATATAAGCAT+TGG | + | chr8_4:12613222-12613241 | None:intergenic | 25.0% |
| ! | CGTGATACAATAAATATCAA+TGG | - | chr8_4:12613952-12613971 | Msa1314090:CDS | 25.0% |
| ! | GATTTCTTCAATAGTTTACA+AGG | - | chr8_4:12614050-12614069 | Msa1314090:intron | 25.0% |
| ! | TTCAATAGTTTACAAGGATT+GGG | - | chr8_4:12614056-12614075 | Msa1314090:intron | 25.0% |
| ! | GGACCATCTATATAAAAATT+AGG | - | chr8_4:12614139-12614158 | Msa1314090:CDS | 25.0% |
| !! | GCTCCTAATTTTTATATAGA+TGG | + | chr8_4:12614145-12614164 | None:intergenic | 25.0% |
| ! | AAATTATCTTCTTGATTCAG+AGG | - | chr8_4:12614189-12614208 | Msa1314090:CDS | 25.0% |
| ! | AAGACACTGAAATTCAAAAA+TGG | - | chr8_4:12614367-12614386 | Msa1314090:intron | 25.0% |
| ! | ATAAATCTTCTACTAAGAGT+TGG | + | chr8_4:12614570-12614589 | None:intergenic | 25.0% |
| ! | TCTTAGTAGAAGATTTATTC+CGG | - | chr8_4:12614572-12614591 | Msa1314090:CDS | 25.0% |
| !!! | ATAATTTGCTTCCAAACTTT+TGG | + | chr8_4:12614794-12614813 | None:intergenic | 25.0% |
| !! | AGCAAATTATCTGAAATTGA+AGG | - | chr8_4:12614804-12614823 | Msa1314090:intron | 25.0% |
| !! | GCAAATTATCTGAAATTGAA+GGG | - | chr8_4:12614805-12614824 | Msa1314090:intron | 25.0% |
| ! | TTCTAAATAGAGATACTGTT+GGG | + | chr8_4:12614945-12614964 | None:intergenic | 25.0% |
| ! | TTTCTAAATAGAGATACTGT+TGG | + | chr8_4:12614946-12614965 | None:intergenic | 25.0% |
| !! | AAGAAAAAAAAAAGTGTGTG+TGG | - | chr8_4:12614964-12614983 | Msa1314090:intron | 25.0% |
| ! | TGTGTACTACTATTGTATTT+GGG | - | chr8_4:12615081-12615100 | Msa1314090:intron | 25.0% |
| !! | ATAATGATGTGTTTGTTGAT+AGG | - | chr8_4:12615119-12615138 | Msa1314090:intron | 25.0% |
| !! | TAATGATGTGTTTGTTGATA+GGG | - | chr8_4:12615120-12615139 | Msa1314090:intron | 25.0% |
| !! | ATGAACTTGATGATTAATCT+AGG | - | chr8_4:12615164-12615183 | Msa1314090:CDS | 25.0% |
| ! | TATTAGGCAAGTTTACTAAA+TGG | - | chr8_4:12615415-12615434 | Msa1314090:five_prime_UTR | 25.0% |
| TTTGGCATCTTAAACAACAA+GGG | - | chr8_4:12611206-12611225 | Msa1314090:three_prime_UTR | 30.0% | |
| ! | TTCTTGGACTAGGAAATTAA+TGG | + | chr8_4:12611599-12611618 | None:intergenic | 30.0% |
| ACTAATTGAGCAAAAACAAG+TGG | - | chr8_4:12611629-12611648 | Msa1314090:exon | 30.0% | |
| TTTCTTATGTAAAATGCTCC+AGG | + | chr8_4:12611919-12611938 | None:intergenic | 30.0% | |
| ! | AAATAAACTGAACCGATTCA+CGG | + | chr8_4:12611996-12612015 | None:intergenic | 30.0% |
| CTATAATGATTTAATGGAGC+CGG | + | chr8_4:12612312-12612331 | None:intergenic | 30.0% | |
| ! | ATTTAACGTGTCCATTTTGT+AGG | - | chr8_4:12612560-12612579 | Msa1314090:CDS | 30.0% |
| ATTAGAACGTTCCTACAAAA+TGG | + | chr8_4:12612574-12612593 | None:intergenic | 30.0% | |
| ! | TTTTGTAGGAACGTTCTAAT+TGG | - | chr8_4:12612574-12612593 | Msa1314090:CDS | 30.0% |
| ! | GTTCCAAGAGATGAAAATTT+TGG | - | chr8_4:12612654-12612673 | Msa1314090:CDS | 30.0% |
| ! | TGACCAAAATTTTCATCTCT+TGG | + | chr8_4:12612660-12612679 | None:intergenic | 30.0% |
| ATTTGGTACATACTTGAAGA+AGG | + | chr8_4:12613151-12613170 | None:intergenic | 30.0% | |
| CAATTATTCTTTGATATGCC+AGG | - | chr8_4:12613241-12613260 | Msa1314090:CDS | 30.0% | |
| ATGTTTATCCTCTCCAAATA+TGG | + | chr8_4:12613519-12613538 | None:intergenic | 30.0% | |
| ATCTTGTTCTTGAAAGATGA+TGG | - | chr8_4:12613567-12613586 | Msa1314090:intron | 30.0% | |
| TCTTGTTCTTGAAAGATGAT+GGG | - | chr8_4:12613568-12613587 | Msa1314090:intron | 30.0% | |
| !! | TTCAATTGCTATTGGTTTCA+AGG | + | chr8_4:12613595-12613614 | None:intergenic | 30.0% |
| AAATTGTACTTTCAACACCT+TGG | + | chr8_4:12613683-12613702 | None:intergenic | 30.0% | |
| !! | AAGGTGTTGAAAGTACAATT+TGG | - | chr8_4:12613682-12613701 | Msa1314090:CDS | 30.0% |
| ! | TGAAAGTACAATTTGGCTAT+TGG | - | chr8_4:12613689-12613708 | Msa1314090:CDS | 30.0% |
| AATATAAAAAATGGGGTTGC+AGG | - | chr8_4:12613833-12613852 | Msa1314090:CDS | 30.0% | |
| ! | CTATTTGTTGCTATGATGAA+TGG | + | chr8_4:12613883-12613902 | None:intergenic | 30.0% |
| CATTCATCATAGCAACAAAT+AGG | - | chr8_4:12613881-12613900 | Msa1314090:CDS | 30.0% | |
| TTTATTGTATCACGGAAATG+AGG | + | chr8_4:12613946-12613965 | None:intergenic | 30.0% | |
| CTTCAATAGTTTACAAGGAT+TGG | - | chr8_4:12614055-12614074 | Msa1314090:intron | 30.0% | |
| AGAAATATGGGATGCTATTA+AGG | - | chr8_4:12614290-12614309 | Msa1314090:CDS | 30.0% | |
| ACACTGAAATTCAAAAATGG+TGG | - | chr8_4:12614370-12614389 | Msa1314090:intron | 30.0% | |
| ! | TGAAATTCAAAAATGGTGGA+AGG | - | chr8_4:12614374-12614393 | Msa1314090:intron | 30.0% |
| AATCTTGCTCCATTATCATA+TGG | - | chr8_4:12614475-12614494 | Msa1314090:intron | 30.0% | |
| AACTTTGGACAATATCCTTA+TGG | - | chr8_4:12614525-12614544 | Msa1314090:CDS | 30.0% | |
| GAAATTGAAGGGAAAATCAA+CGG | - | chr8_4:12614816-12614835 | Msa1314090:intron | 30.0% | |
| AAATTGAAGGGAAAATCAAC+GGG | - | chr8_4:12614817-12614836 | Msa1314090:intron | 30.0% | |
| !! | GAAGAAGGTTTAACTTTTAG+AGG | - | chr8_4:12614915-12614934 | Msa1314090:intron | 30.0% |
| GTGTGTACTACTATTGTATT+TGG | - | chr8_4:12615080-12615099 | Msa1314090:intron | 30.0% | |
| ! | TCTAGGACATTAGATTCTTA+CGG | - | chr8_4:12615181-12615200 | Msa1314090:CDS | 30.0% |
| GAGCAGATGTATAATCTATT+AGG | - | chr8_4:12615399-12615418 | Msa1314090:five_prime_UTR | 30.0% | |
| GTTTGGCATCTTAAACAACA+AGG | - | chr8_4:12611205-12611224 | Msa1314090:three_prime_UTR | 35.0% | |
| AACAAGGGCCAAAAAATCAA+GGG | - | chr8_4:12611221-12611240 | Msa1314090:three_prime_UTR | 35.0% | |
| ! | GTTGATGCCCAAAAATGTTT+TGG | - | chr8_4:12611253-12611272 | Msa1314090:three_prime_UTR | 35.0% |
| ! | ATAAGTGCTACTAAGACTGA+TGG | - | chr8_4:12611416-12611435 | Msa1314090:three_prime_UTR | 35.0% |
| !!! | GATGCTAATTTTGGAATTCC+TGG | - | chr8_4:12611898-12611917 | Msa1314090:CDS | 35.0% |
| AGATATTCCTAACCGTGAAT+CGG | - | chr8_4:12611981-12612000 | Msa1314090:CDS | 35.0% | |
| ! | AATGATTTGGGAAATCCAGA+TGG | - | chr8_4:12612414-12612433 | Msa1314090:intron | 35.0% |
| GGTAGAAAACCAACTAGAAA+AGG | - | chr8_4:12612507-12612526 | Msa1314090:CDS | 35.0% | |
| AAATTCACTAACCGCTACTT+TGG | + | chr8_4:12612544-12612563 | None:intergenic | 35.0% | |
| TCATCAGACTTCCTTATGTA+TGG | - | chr8_4:12612687-12612706 | Msa1314090:CDS | 35.0% | |
| !! | ACTCATTTGGTGTGAAATTG+AGG | + | chr8_4:12612767-12612786 | None:intergenic | 35.0% |
| ! | ATTTCTTTAAGGGCTGGTAA+GGG | + | chr8_4:12612867-12612886 | None:intergenic | 35.0% |
| GGTGCGAAAGATTTCTTTAA+GGG | + | chr8_4:12612877-12612896 | None:intergenic | 35.0% | |
| GCTGCTAATATATGCATGAA+AGG | + | chr8_4:12612989-12613008 | None:intergenic | 35.0% | |
| TGGATGACTGATGAAGAATT+TGG | - | chr8_4:12613086-12613105 | Msa1314090:CDS | 35.0% | |
| TGAAGAATTTGGAAGAGAGA+TGG | - | chr8_4:12613097-12613116 | Msa1314090:CDS | 35.0% | |
| !! | ATTTTGATCACCATAGACAG+TGG | + | chr8_4:12613294-12613313 | None:intergenic | 35.0% |
| !!! | TTTTTGGAACAGGCACTTAA+TGG | - | chr8_4:12613453-12613472 | Msa1314090:CDS | 35.0% |
| ATGCATCATGGTAATCTAAG+AGG | + | chr8_4:12613491-12613510 | None:intergenic | 35.0% | |
| AATATGGCATGAATGCATCA+TGG | + | chr8_4:12613503-12613522 | None:intergenic | 35.0% | |
| TGATGCATTCATGCCATATT+TGG | - | chr8_4:12613503-12613522 | Msa1314090:CDS | 35.0% | |
| GAGGATAAACATAAACGCAA+AGG | - | chr8_4:12613527-12613546 | Msa1314090:intron | 35.0% | |
| CAAGAACAAGATTGTTCTTG+TGG | + | chr8_4:12613559-12613578 | None:intergenic | 35.0% | |
| TTAAGTTTGCCACACTCAAA+TGG | - | chr8_4:12613615-12613634 | Msa1314090:intron | 35.0% | |
| TAAGTTTGCCACACTCAAAT+GGG | - | chr8_4:12613616-12613635 | Msa1314090:intron | 35.0% | |
| TACAATTTGGCTATTGGCAA+AGG | - | chr8_4:12613695-12613714 | Msa1314090:CDS | 35.0% | |
| CTAAGAAGAGTTCATACCAA+TGG | + | chr8_4:12613764-12613783 | None:intergenic | 35.0% | |
| ! | ATAGAGCAAACATTTTTGCC+AGG | - | chr8_4:12614012-12614031 | Msa1314090:intron | 35.0% |
| GAAGAAATCTCGACTGAATT+TGG | + | chr8_4:12614039-12614058 | None:intergenic | 35.0% | |
| TATATAGATGGTCCAAATCG+TGG | + | chr8_4:12614133-12614152 | None:intergenic | 35.0% | |
| !! | CCATATTTCTAGTCCATCAA+CGG | + | chr8_4:12614280-12614299 | None:intergenic | 35.0% |
| !! | CGTTGATGGACTAGAAATAT+GGG | - | chr8_4:12614278-12614297 | Msa1314090:CDS | 35.0% |
| AGTATAAGGAGACATAGTCT+TGG | + | chr8_4:12614323-12614342 | None:intergenic | 35.0% | |
| CTCATCTGTTGGATAGTATA+AGG | + | chr8_4:12614337-12614356 | None:intergenic | 35.0% | |
| CTTATACTATCCAACAGATG+AGG | - | chr8_4:12614335-12614354 | Msa1314090:intron | 35.0% | |
| ! | TCTTGAAGTGTTTGCATCTT+AGG | + | chr8_4:12614447-12614466 | None:intergenic | 35.0% |
| TGAAGCAGTCCATATGATAA+TGG | + | chr8_4:12614487-12614506 | None:intergenic | 35.0% | |
| TTTGGACAATATCCTTATGG+AGG | - | chr8_4:12614528-12614547 | Msa1314090:CDS | 35.0% | |
| TTCAGGATATATCCTCCATA+AGG | + | chr8_4:12614543-12614562 | None:intergenic | 35.0% | |
| ATCTTCTACTAAGAGTTGGA+CGG | + | chr8_4:12614566-12614585 | None:intergenic | 35.0% | |
| TTCACCATCTCATCATATTC+CGG | + | chr8_4:12614609-12614628 | None:intergenic | 35.0% | |
| ! | TCAATAAGCGTCTGAAACTT+TGG | + | chr8_4:12614666-12614685 | None:intergenic | 35.0% |
| !!! | GAATGACAAGTTTTGGACAT+CGG | - | chr8_4:12614746-12614765 | Msa1314090:CDS | 35.0% |
| ! | TTTGCTTCCAAACTTTTGGA+AGG | + | chr8_4:12614790-12614809 | None:intergenic | 35.0% |
| TCGATGTACATCGATGTTAT+TGG | + | chr8_4:12615019-12615038 | None:intergenic | 35.0% | |
| CTAGGACATTAGATTCTTAC+GGG | - | chr8_4:12615182-12615201 | Msa1314090:CDS | 35.0% | |
| TAGGACATTAGATTCTTACG+GGG | - | chr8_4:12615183-12615202 | Msa1314090:CDS | 35.0% | |
| TTACGGGGTTCTTAGTTAAT+AGG | - | chr8_4:12615198-12615217 | Msa1314090:CDS | 35.0% | |
| TTATATTCATCTTCACGCGT+TGG | + | chr8_4:12615260-12615279 | None:intergenic | 35.0% | |
| CAACAAGGGCCAAAAAATCA+AGG | - | chr8_4:12611220-12611239 | Msa1314090:three_prime_UTR | 40.0% | |
| ACAAGGGCCAAAAAATCAAG+GGG | - | chr8_4:12611222-12611241 | Msa1314090:three_prime_UTR | 40.0% | |
| TCAACTGCATAGAGACGTTA+CGG | + | chr8_4:12611397-12611416 | None:intergenic | 40.0% | |
| TCTACCACAGTTACCAACTT+TGG | - | chr8_4:12611837-12611856 | Msa1314090:CDS | 40.0% | |
| CTACCACAGTTACCAACTTT+GGG | - | chr8_4:12611838-12611857 | Msa1314090:CDS | 40.0% | |
| CTTCAAGAGTCACACTAACA+AGG | + | chr8_4:12611963-12611982 | None:intergenic | 40.0% | |
| CATCATTGGTGAAGAAGATG+CGG | + | chr8_4:12612059-12612078 | None:intergenic | 40.0% | |
| GTATCTTCCAAGTCAAACAC+CGG | - | chr8_4:12612290-12612309 | Msa1314090:CDS | 40.0% | |
| !! | GCGAACTAACCTTTTCTAGT+TGG | + | chr8_4:12612519-12612538 | None:intergenic | 40.0% |
| TTAGTTCGCTACCAAAGTAG+CGG | - | chr8_4:12612530-12612549 | Msa1314090:CDS | 40.0% | |
| CTTGGAACATAAATCACACC+AGG | + | chr8_4:12612642-12612661 | None:intergenic | 40.0% | |
| TCGAAGCTATCGAACTCATT+TGG | + | chr8_4:12612780-12612799 | None:intergenic | 40.0% | |
| ! | GAAGTACGTGATCTTTTCGA+AGG | - | chr8_4:12612801-12612820 | Msa1314090:intron | 40.0% |
| ! | GATTTCTTTAAGGGCTGGTA+AGG | + | chr8_4:12612868-12612887 | None:intergenic | 40.0% |
| ! | CGAAAGATTTCTTTAAGGGC+TGG | + | chr8_4:12612873-12612892 | None:intergenic | 40.0% |
| CGGTGCGAAAGATTTCTTTA+AGG | + | chr8_4:12612878-12612897 | None:intergenic | 40.0% | |
| AAAGAAATCTTTCGCACCGA+TGG | - | chr8_4:12612879-12612898 | Msa1314090:CDS | 40.0% | |
| GTACCTTTGATTACATGAGG+TGG | + | chr8_4:12612927-12612946 | None:intergenic | 40.0% | |
| ! | GAGGTACCTTTGATTACATG+AGG | + | chr8_4:12612930-12612949 | None:intergenic | 40.0% |
| !! | TGAATCGATTTGGATGAACG+AGG | + | chr8_4:12612949-12612968 | None:intergenic | 40.0% |
| TGAAGAAGGCGAATCACATT+AGG | + | chr8_4:12613137-12613156 | None:intergenic | 40.0% | |
| !! | GTATCTAGTGTGCTTTTTGG+TGG | + | chr8_4:12613272-12613291 | None:intergenic | 40.0% |
| ! | GTGGTATCTAGTGTGCTTTT+TGG | + | chr8_4:12613275-12613294 | None:intergenic | 40.0% |
| ACACTAGATACCACTGTCTA+TGG | - | chr8_4:12613281-12613300 | Msa1314090:CDS | 40.0% | |
| GAACACTTAGAGACTAACCT+TGG | - | chr8_4:12613329-12613348 | Msa1314090:intron | 40.0% | |
| CTTCTACTGTGATTTCACCA+AGG | + | chr8_4:12613349-12613368 | None:intergenic | 40.0% | |
| TGGTGAAATCACAGTAGAAG+AGG | - | chr8_4:12613349-12613368 | Msa1314090:intron | 40.0% | |
| CATTCATGCCATATTTGGAG+AGG | - | chr8_4:12613508-12613527 | Msa1314090:CDS | 40.0% | |
| AAGTTTGCCACACTCAAATG+GGG | - | chr8_4:12613617-12613636 | Msa1314090:intron | 40.0% | |
| CTTTGCTTTCAGAACCGTAT+TGG | + | chr8_4:12613644-12613663 | None:intergenic | 40.0% | |
| ATCATCAACTCATGAGCCAT+TGG | - | chr8_4:12613745-12613764 | Msa1314090:CDS | 40.0% | |
| CAGGTTAAATACTCATGCAG+TGG | - | chr8_4:12613852-12613871 | Msa1314090:CDS | 40.0% | |
| CGACAATCTCTAATCAATGC+TGG | - | chr8_4:12613982-12614001 | Msa1314090:intron | 40.0% | |
| CAATCTCTAATCAATGCTGG+TGG | - | chr8_4:12613985-12614004 | Msa1314090:intron | 40.0% | |
| ! | TAAGATCAGCTGGTAATGCT+TGG | + | chr8_4:12614092-12614111 | None:intergenic | 40.0% |
| TACCAGCTGATCTTATCAAG+AGG | - | chr8_4:12614097-12614116 | Msa1314090:CDS | 40.0% | |
| TACCTCTTGATAAGATCAGC+TGG | + | chr8_4:12614102-12614121 | None:intergenic | 40.0% | |
| !! | GGTATTTTTCGACCACGATT+TGG | - | chr8_4:12614118-12614137 | Msa1314090:CDS | 40.0% |
| TAACACAAGACGAAGTCCAT+GGG | + | chr8_4:12614241-12614260 | None:intergenic | 40.0% | |
| !! | CCGTTGATGGACTAGAAATA+TGG | - | chr8_4:12614277-12614296 | Msa1314090:CDS | 40.0% |
| TATGGGATGCTATTAAGGCA+TGG | - | chr8_4:12614295-12614314 | Msa1314090:intron | 40.0% | |
| ATGGGATGCTATTAAGGCAT+GGG | - | chr8_4:12614296-12614315 | Msa1314090:intron | 40.0% | |
| TGGAAGGAAGCTGTAGAAAA+GGG | - | chr8_4:12614390-12614409 | Msa1314090:intron | 40.0% | |
| GATGCAAACACTTCAAGACT+TGG | - | chr8_4:12614449-12614468 | Msa1314090:intron | 40.0% | |
| CTTCATGCAGCAGTTAACTT+TGG | - | chr8_4:12614510-12614529 | Msa1314090:intron | 40.0% | |
| AACTCCGGAATATGATGAGA+TGG | - | chr8_4:12614602-12614621 | Msa1314090:CDS | 40.0% | |
| GATGGTGAAAAGTCCTCAAA+AGG | - | chr8_4:12614620-12614639 | Msa1314090:CDS | 40.0% | |
| ! | GTTCTCAAATACGCCTTTTG+AGG | + | chr8_4:12614636-12614655 | None:intergenic | 40.0% |
| ! | GAGAGAGGAATGACAAGTTT+TGG | - | chr8_4:12614739-12614758 | Msa1314090:CDS | 40.0% |
| !!! | AGTTTTGGACATCGGATACA+AGG | - | chr8_4:12614754-12614773 | Msa1314090:CDS | 40.0% |
| !! | GTTTTGGACATCGGATACAA+GGG | - | chr8_4:12614755-12614774 | Msa1314090:CDS | 40.0% |
| ! | TCTAGTTTGAAAAACCGCAC+TGG | - | chr8_4:12614852-12614871 | Msa1314090:intron | 40.0% |
| AAAGTGTAGGGCAATTCAAC+TGG | + | chr8_4:12614879-12614898 | None:intergenic | 40.0% | |
| AACCTTCTTCACTTGAACGA+AGG | + | chr8_4:12614905-12614924 | None:intergenic | 40.0% | |
| TGGAAATGAACTACTCTGCA+TGG | - | chr8_4:12615435-12615454 | Msa1314090:five_prime_UTR | 40.0% | |
| AAATGAACTACTCTGCATGG+AGG | - | chr8_4:12615438-12615457 | Msa1314090:five_prime_UTR | 40.0% | |
| !!! | CCACAGTCCCCTTGATTTTT+TGG | + | chr8_4:12611232-12611251 | None:intergenic | 45.0% |
| CCAAAAAATCAAGGGGACTG+TGG | - | chr8_4:12611229-12611248 | Msa1314090:three_prime_UTR | 45.0% | |
| TTCAATGCCATAACGTCCGT+CGG | - | chr8_4:12611278-12611297 | Msa1314090:three_prime_UTR | 45.0% | |
| AATAACACCGCCTTTACCGA+CGG | + | chr8_4:12611297-12611316 | None:intergenic | 45.0% | |
| GACTCCTCCGATGATATTTC+CGG | + | chr8_4:12611327-12611346 | None:intergenic | 45.0% | |
| AATATCATCGGAGGAGTCAC+CGG | - | chr8_4:12611329-12611348 | Msa1314090:three_prime_UTR | 45.0% | |
| GCAAATGGAAAGGGTCTAGT+TGG | - | chr8_4:12611790-12611809 | Msa1314090:CDS | 45.0% | |
| TGGAAAGGGTCTAGTTGGAA+AGG | - | chr8_4:12611795-12611814 | Msa1314090:CDS | 45.0% | |
| TCTTGTCTTGCTCCCAAAGT+TGG | + | chr8_4:12611853-12611872 | None:intergenic | 45.0% | |
| ! | AACTGAACCGATTCACGGTT+AGG | + | chr8_4:12611991-12612010 | None:intergenic | 45.0% |
| GAAGAGTTGCAGACTCTAAG+AGG | - | chr8_4:12612336-12612355 | Msa1314090:CDS | 45.0% | |
| ! | TTGCAGACTCTAAGAGGAGA+TGG | - | chr8_4:12612342-12612361 | Msa1314090:CDS | 45.0% |
| ! | ACTCTAAGAGGAGATGGAAC+TGG | - | chr8_4:12612348-12612367 | Msa1314090:CDS | 45.0% |
| ! | AACTGGAGAGCGCAAAGAAT+CGG | - | chr8_4:12612365-12612384 | Msa1314090:CDS | 45.0% |
| GATTTGGGAAATCCAGATGG+TGG | - | chr8_4:12612417-12612436 | Msa1314090:intron | 45.0% | |
| GATCCTAAGAGTGAGAAACC+TGG | - | chr8_4:12612621-12612640 | Msa1314090:CDS | 45.0% | |
| ACACCAGGTTTCTCACTCTT+AGG | + | chr8_4:12612627-12612646 | None:intergenic | 45.0% | |
| ! | GTACGTGATCTTTTCGAAGG+TGG | - | chr8_4:12612804-12612823 | Msa1314090:intron | 45.0% |
| ! | CTTGAGGACTTGTTCACCAT+CGG | + | chr8_4:12612898-12612917 | None:intergenic | 45.0% |
| CCTTTGATTACATGAGGTGG+TGG | + | chr8_4:12612924-12612943 | None:intergenic | 45.0% | |
| CCACCACCTCATGTAATCAA+AGG | - | chr8_4:12612921-12612940 | Msa1314090:CDS | 45.0% | |
| TTTGGAAGAGAGATGGTTGC+TGG | - | chr8_4:12613104-12613123 | Msa1314090:CDS | 45.0% | |
| !! | TGCTTTTTGGTGGAAACTCC+TGG | + | chr8_4:12613262-12613281 | None:intergenic | 45.0% |
| TATTGGACCCCATTTGAGTG+TGG | + | chr8_4:12613627-12613646 | None:intergenic | 45.0% | |
| CACTCAAATGGGGTCCAATA+CGG | - | chr8_4:12613627-12613646 | Msa1314090:intron | 45.0% | |
| ATCTCGACTGAATTTGGTCC+TGG | + | chr8_4:12614033-12614052 | None:intergenic | 45.0% | |
| ! | ATCAGCTGGTAATGCTTGGT+CGG | + | chr8_4:12614088-12614107 | None:intergenic | 45.0% |
| !! | ATTCAGAGGACTTGCTGTTG+AGG | - | chr8_4:12614203-12614222 | Msa1314090:CDS | 45.0% |
| AACACAAGACGAAGTCCATG+GGG | + | chr8_4:12614240-12614259 | None:intergenic | 45.0% | |
| CTAACACAAGACGAAGTCCA+TGG | + | chr8_4:12614242-12614261 | None:intergenic | 45.0% | |
| CTAGTCCATCAACGGCATAA+GGG | + | chr8_4:12614272-12614291 | None:intergenic | 45.0% | |
| TCTAGTCCATCAACGGCATA+AGG | + | chr8_4:12614273-12614292 | None:intergenic | 45.0% | |
| ! | TTTTGCACTGCCTCATCTGT+TGG | + | chr8_4:12614348-12614367 | None:intergenic | 45.0% |
| GTGGAAGGAAGCTGTAGAAA+AGG | - | chr8_4:12614389-12614408 | Msa1314090:intron | 45.0% | |
| GAAGCTGTAGAAAAGGGTCA+TGG | - | chr8_4:12614396-12614415 | Msa1314090:intron | 45.0% | |
| GTGACTTGAAAGACAAGCCA+TGG | - | chr8_4:12614418-12614437 | Msa1314090:intron | 45.0% | |
| ACTTGAAAGACAAGCCATGG+TGG | - | chr8_4:12614421-12614440 | Msa1314090:intron | 45.0% | |
| TACTAAGAGTTGGACGGTTC+AGG | + | chr8_4:12614560-12614579 | None:intergenic | 45.0% | |
| AGAAGATTTATTCCGGAGCC+AGG | - | chr8_4:12614579-12614598 | Msa1314090:CDS | 45.0% | |
| TCATCATATTCCGGAGTTCC+TGG | + | chr8_4:12614600-12614619 | None:intergenic | 45.0% | |
| GTCAAGACATGCTTCTGATG+AGG | - | chr8_4:12614707-12614726 | Msa1314090:CDS | 45.0% | |
| GTACAGGCCTTCCAAAAGTT+TGG | - | chr8_4:12614780-12614799 | Msa1314090:CDS | 45.0% | |
| TTGAAGGGAAAATCAACGGG+AGG | - | chr8_4:12614820-12614839 | Msa1314090:intron | 45.0% | |
| GAACGAAGGAGCAAAGTGTA+GGG | + | chr8_4:12614891-12614910 | None:intergenic | 45.0% | |
| TGAACGAAGGAGCAAAGTGT+AGG | + | chr8_4:12614892-12614911 | None:intergenic | 45.0% | |
| CTCCTTCGTTCAAGTGAAGA+AGG | - | chr8_4:12614900-12614919 | Msa1314090:intron | 45.0% | |
| !!! | TTGATAAATTATAAAAATTT+TGG | - | chr8_4:12612178-12612197 | Msa1314090:CDS | 5.0% |
| !! | ATGATTATTAATATAAAAAA+TGG | - | chr8_4:12613824-12613843 | Msa1314090:CDS | 5.0% |
| !! | TGATTATTAATATAAAAAAT+GGG | - | chr8_4:12613825-12613844 | Msa1314090:CDS | 5.0% |
| ATAACGTCCGTCGGTAAAGG+CGG | - | chr8_4:12611287-12611306 | Msa1314090:three_prime_UTR | 50.0% | |
| GACACCGCCGGAAATATCAT+CGG | - | chr8_4:12611317-12611336 | Msa1314090:three_prime_UTR | 50.0% | |
| TCCTCCGATGATATTTCCGG+CGG | + | chr8_4:12611324-12611343 | None:intergenic | 50.0% | |
| GACACTGCCACTGCTTTCTT+AGG | - | chr8_4:12611371-12611390 | Msa1314090:three_prime_UTR | 50.0% | |
| GTTACGGCCTAAGAAAGCAG+TGG | + | chr8_4:12611381-12611400 | None:intergenic | 50.0% | |
| !! | GCTCCCAAAGTTGGTAACTG+TGG | + | chr8_4:12611844-12611863 | None:intergenic | 50.0% |
| AATGGAGCCGGTGTTTGACT+TGG | + | chr8_4:12612300-12612319 | None:intergenic | 50.0% | |
| TACCACTTCTAACCCTGCGA+GGG | + | chr8_4:12612491-12612510 | None:intergenic | 50.0% | |
| !! | CATGAGGTGGTGGAAACTTG+AGG | + | chr8_4:12612914-12612933 | None:intergenic | 50.0% |
| GAGCAGTTAGCAAGTCTGCA+TGG | - | chr8_4:12613066-12613085 | Msa1314090:CDS | 50.0% | |
| GTATACTTGCCTGCTGACCA+AGG | - | chr8_4:12613663-12613682 | Msa1314090:CDS | 50.0% | |
| CTTTCAACACCTTGGTCAGC+AGG | + | chr8_4:12613675-12613694 | None:intergenic | 50.0% | |
| ACACAAGACGAAGTCCATGG+GGG | + | chr8_4:12614239-12614258 | None:intergenic | 50.0% | |
| GACTACCCTTATGCCGTTGA+TGG | - | chr8_4:12614264-12614283 | Msa1314090:CDS | 50.0% | |
| GTTTGCATCTTAGGCCACCA+TGG | + | chr8_4:12614438-12614457 | None:intergenic | 50.0% | |
| GCTTCTGATGAGGTGTACCT+CGG | - | chr8_4:12614717-12614736 | Msa1314090:CDS | 50.0% | |
| ACTTGTCATTCCTCTCTCCG+AGG | + | chr8_4:12614737-12614756 | None:intergenic | 50.0% | |
| ATCGGATACAAGGGCAGTAC+AGG | - | chr8_4:12614764-12614783 | Msa1314090:CDS | 50.0% | |
| GCAATTCAACTGGTCCAGTG+CGG | + | chr8_4:12614869-12614888 | None:intergenic | 50.0% | |
| GCCATAACGTCCGTCGGTAA+AGG | - | chr8_4:12611284-12611303 | Msa1314090:three_prime_UTR | 55.0% | |
| GCCTTTACCGACGGACGTTA+TGG | + | chr8_4:12611288-12611307 | None:intergenic | 55.0% | |
| ACCGCCGGAAATATCATCGG+AGG | - | chr8_4:12611320-12611339 | Msa1314090:three_prime_UTR | 55.0% | |
| CACAACTCCGCCAACAATGC+CGG | + | chr8_4:12611351-12611370 | None:intergenic | 55.0% | |
| ACAAGTGCGTCACCACCATC+TGG | + | chr8_4:12612432-12612451 | None:intergenic | 55.0% | |
| GATAGGTGCTTGATCCCCCA+AGG | + | chr8_4:12612464-12612483 | None:intergenic | 55.0% | |
| CTTCTAACCCTGCGAGGGTA+GGG | + | chr8_4:12612486-12612505 | None:intergenic | 55.0% | |
| ACTTCTAACCCTGCGAGGGT+AGG | + | chr8_4:12612487-12612506 | None:intergenic | 55.0% | |
| TACCCTCGCAGGGTTAGAAG+TGG | - | chr8_4:12612486-12612505 | Msa1314090:CDS | 55.0% | |
| CTACCACTTCTAACCCTGCG+AGG | + | chr8_4:12612492-12612511 | None:intergenic | 55.0% | |
| CACAAGACGAAGTCCATGGG+GGG | + | chr8_4:12614238-12614257 | None:intergenic | 55.0% | |
| TATTCCGGAGCCAGGAACTC+CGG | - | chr8_4:12614587-12614606 | Msa1314090:CDS | 55.0% | |
| TATTCCGGAGTTCCTGGCTC+CGG | + | chr8_4:12614594-12614613 | None:intergenic | 55.0% | |
| ATGAGGTGTACCTCGGAGAG+AGG | - | chr8_4:12614724-12614743 | Msa1314090:CDS | 55.0% | |
| !! | GGCGGTGTTATTGACACCGC+CGG | - | chr8_4:12611305-12611324 | Msa1314090:three_prime_UTR | 60.0% |
| GGAGGAGTCACCGGCATTGT+TGG | - | chr8_4:12611338-12611357 | Msa1314090:three_prime_UTR | 60.0% | |
| GGAGTCACCGGCATTGTTGG+CGG | - | chr8_4:12611341-12611360 | Msa1314090:three_prime_UTR | 60.0% | |
| CGGCATTGTTGGCGGAGTTG+TGG | - | chr8_4:12611349-12611368 | Msa1314090:three_prime_UTR | 60.0% | |
| CACTTGTCCGACCCGTCCTT+GGG | - | chr8_4:12612445-12612464 | Msa1314090:intron | 60.0% | |
| ACTTGTCCGACCCGTCCTTG+GGG | - | chr8_4:12612446-12612465 | Msa1314090:intron | 60.0% | |
| TTGATCCCCCAAGGACGGGT+CGG | + | chr8_4:12612455-12612474 | None:intergenic | 60.0% | |
| GTGCTTGATCCCCCAAGGAC+GGG | + | chr8_4:12612459-12612478 | None:intergenic | 60.0% | |
| GGTGCTTGATCCCCCAAGGA+CGG | + | chr8_4:12612460-12612479 | None:intergenic | 60.0% | |
| CACCTATCCCTACCCTCGCA+GGG | - | chr8_4:12612476-12612495 | Msa1314090:intron | 60.0% | |
| AACCCTGCGAGGGTAGGGAT+AGG | + | chr8_4:12612481-12612500 | None:intergenic | 60.0% | |
| GAAGTCCATGGGGGGAAGAC+GGG | + | chr8_4:12614230-12614249 | None:intergenic | 60.0% | |
| CGAAGTCCATGGGGGGAAGA+CGG | + | chr8_4:12614231-12614250 | None:intergenic | 60.0% | |
| GCACTTGTCCGACCCGTCCT+TGG | - | chr8_4:12612444-12612463 | Msa1314090:intron | 65.0% | |
| CTTGTCCGACCCGTCCTTGG+GGG | - | chr8_4:12612447-12612466 | Msa1314090:intron | 65.0% | |
| GCACCTATCCCTACCCTCGC+AGG | - | chr8_4:12612475-12612494 | Msa1314090:intron | 65.0% | |
| GAGGACCCGTCTTCCCCCCA+TGG | - | chr8_4:12614222-12614241 | Msa1314090:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12611134 | 12615466 | 12611134 | ID=Msa1314090;Name=Msa1314090 |
| chr8_4 | mRNA | 12611134 | 12615466 | 12611134 | ID=Msa1314090-mRNA-1;Parent=Msa1314090;Name=Msa1314090-mRNA-1;_AED=0.29;_eAED=0.29;_QI=69|1|1|1|1|1|9|504|865 |
| chr8_4 | exon | 12611134 | 12612391 | 12611134 | ID=Msa1314090-mRNA-1:exon:4753;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12612482 | 12612745 | 12612482 | ID=Msa1314090-mRNA-1:exon:4752;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12612834 | 12613135 | 12612834 | ID=Msa1314090-mRNA-1:exon:4751;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12613230 | 12613337 | 12613230 | ID=Msa1314090-mRNA-1:exon:4750;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12613443 | 12613528 | 12613443 | ID=Msa1314090-mRNA-1:exon:4749;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12613658 | 12613978 | 12613658 | ID=Msa1314090-mRNA-1:exon:4748;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12614072 | 12614312 | 12614072 | ID=Msa1314090-mRNA-1:exon:4747;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12614523 | 12614809 | 12614523 | ID=Msa1314090-mRNA-1:exon:4746;Parent=Msa1314090-mRNA-1 |
| chr8_4 | exon | 12615163 | 12615466 | 12615163 | ID=Msa1314090-mRNA-1:exon:4745;Parent=Msa1314090-mRNA-1 |
| chr8_4 | five_prime_UTR | 12615398 | 12615466 | 12615398 | ID=Msa1314090-mRNA-1:five_prime_utr;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12615163 | 12615397 | 12615163 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12614523 | 12614809 | 12614523 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12614072 | 12614312 | 12614072 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12613658 | 12613978 | 12613658 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12613443 | 12613528 | 12613443 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12613230 | 12613337 | 12613230 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12612834 | 12613135 | 12612834 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12612482 | 12612745 | 12612482 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | CDS | 12611638 | 12612391 | 12611638 | ID=Msa1314090-mRNA-1:cds;Parent=Msa1314090-mRNA-1 |
| chr8_4 | three_prime_UTR | 12611134 | 12611637 | 12611134 | ID=Msa1314090-mRNA-1:three_prime_utr;Parent=Msa1314090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
