Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129580 | XP_039683206.1 | 97.807 | 228 | 5 | 0 | 1 | 228 | 1 | 228 | 1.62e-155 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129580 | sp|Q8L8A5|GIF1_ARATH | 57.265 | 234 | 70 | 5 | 1 | 228 | 1 | 210 | 6.12e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129580 | A0A396H836 | 97.368 | 228 | 5 | 1 | 1 | 228 | 1 | 227 | 1.80e-153 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0606100 | Msa1129580 | 0.801295 | 9.631532e-49 | -8.615850e-47 |
| Msa0615630 | Msa1129580 | 0.803488 | 3.403286e-49 | -8.615850e-47 |
| Msa0688380 | Msa1129580 | 0.807009 | 6.232316e-50 | -8.615850e-47 |
| Msa0373170 | Msa1129580 | 0.805095 | 1.574866e-49 | -8.615850e-47 |
| Msa0421750 | Msa1129580 | 0.807551 | 4.783294e-50 | -8.615850e-47 |
| Msa0467690 | Msa1129580 | 0.810423 | 1.161344e-50 | -8.615850e-47 |
| Msa1000970 | Msa1129580 | 0.803940 | 2.742707e-49 | -8.615850e-47 |
| Msa1003740 | Msa1129580 | 0.842257 | 2.887383e-58 | -8.615850e-47 |
| Msa1003800 | Msa1129580 | 0.827352 | 1.640613e-54 | -8.615850e-47 |
| Msa1003930 | Msa1129580 | 0.842707 | 2.193716e-58 | -8.615850e-47 |
| Msa1008670 | Msa1129580 | 0.808552 | 2.928037e-50 | -8.615850e-47 |
| Msa1038190 | Msa1129580 | 0.905484 | 4.088503e-80 | -8.615850e-47 |
| Msa1076020 | Msa1129580 | 0.807242 | 5.561865e-50 | -8.615850e-47 |
| Msa1129580 | Msa1163180 | 0.804543 | 2.053952e-49 | -8.615850e-47 |
| Msa1129580 | Msa1165480 | 0.800983 | 1.115420e-48 | -8.615850e-47 |
| Msa1129580 | Msa1276090 | 0.801178 | 1.017916e-48 | -8.615850e-47 |
| Msa1129580 | Msa1401100 | 0.973277 | 3.711072e-136 | -8.615850e-47 |
| Msa0483910 | Msa1129580 | 0.825395 | 4.798646e-54 | -8.615850e-47 |
| Msa0514020 | Msa1129580 | 0.803719 | 3.048611e-49 | -8.615850e-47 |
| Msa0537990 | Msa1129580 | 0.810353 | 1.202275e-50 | -8.615850e-47 |
| Msa0561560 | Msa1129580 | 0.806521 | 7.899160e-50 | -8.615850e-47 |
| Msa0572830 | Msa1129580 | 0.819573 | 1.081793e-52 | -8.615850e-47 |
| Msa0901150 | Msa1129580 | 0.822971 | 1.780625e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129580 | MtrunA17_Chr7g0274341 | 97.368 | 228 | 5 | 1 | 1 | 228 | 1 | 227 | 3.46e-157 | 434 |
| Msa1129580 | MtrunA17_Chr1g0190481 | 64.935 | 231 | 58 | 9 | 1 | 228 | 1 | 211 | 3.69e-67 | 206 |
| Msa1129580 | MtrunA17_Chr8g0346111 | 61.250 | 80 | 28 | 2 | 7 | 84 | 6 | 84 | 5.22e-25 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129580 | AT5G28640.1 | 57.265 | 234 | 70 | 5 | 1 | 228 | 1 | 210 | 6.22e-58 | 182 |
| Msa1129580 | AT4G00850.2 | 51.429 | 105 | 46 | 2 | 7 | 106 | 6 | 110 | 1.95e-26 | 102 |
| Msa1129580 | AT4G00850.1 | 66.667 | 72 | 22 | 1 | 7 | 76 | 6 | 77 | 2.92e-26 | 101 |
| Msa1129580 | AT1G01160.1 | 63.889 | 72 | 25 | 1 | 2 | 72 | 3 | 74 | 7.34e-23 | 92.0 |
| Msa1129580 | AT1G01160.2 | 43.396 | 106 | 25 | 2 | 2 | 72 | 3 | 108 | 4.95e-16 | 74.7 |
| Msa1129580 | AT5G28640.2 | 44.186 | 172 | 66 | 5 | 63 | 228 | 1 | 148 | 1.16e-11 | 61.2 |
| Msa1129580 | AT5G28640.3 | 44.186 | 172 | 66 | 5 | 63 | 228 | 1 | 148 | 1.16e-11 | 61.2 |
Find 97 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAATTAAGGTAAACTATT+TGG | 0.143303 | 7_3:+81557168 | Msa1129580:three_prime_UTR |
| GTTTATCTTGTGCTTAATTA+AGG | 0.191732 | 7_3:+81557156 | Msa1129580:three_prime_UTR |
| TTAGCTGTTCAGATCGAATT+TGG | 0.252519 | 7_3:+81556988 | Msa1129580:three_prime_UTR |
| GGGTTTGCACAGAAGTCTTA+TGG | 0.269289 | 7_3:+81556842 | Msa1129580:CDS |
| CTTGGAGGCGGTGGAACTTC+AGG | 0.325122 | 7_3:+81556708 | Msa1129580:CDS |
| AAGCTAAAATGCATCTGAAT+TGG | 0.337794 | 7_3:-81557030 | None:intergenic |
| AGAGAGAGAGCATTGGGGTT+GGG | 0.342124 | 7_3:-81553898 | None:intergenic |
| ACCTGCACCTGTGTTTCCTT+TGG | 0.359038 | 7_3:+81554041 | Msa1129580:five_prime_UTR |
| TCAACATTGGGTTCTGGTGG+TGG | 0.361229 | 7_3:+81556789 | Msa1129580:CDS |
| TGATCAGTGGTGACGTTGTT+TGG | 0.375156 | 7_3:-81554248 | None:intergenic |
| GATTGTAGAGAGTCAGAATT+CGG | 0.378404 | 7_3:+81555863 | Msa1129580:CDS |
| TTCTGGTGGTGGAGTGATGC+AGG | 0.385903 | 7_3:+81556545 | Msa1129580:CDS |
| TCATGGGCTGCATCTGCATC+AGG | 0.386454 | 7_3:-81554211 | None:intergenic |
| GAGAGAGAGCATTGGGGTTG+GGG | 0.390988 | 7_3:-81553897 | None:intergenic |
| GCTGTTGCTGCGCGAATAGA+AGG | 0.398335 | 7_3:-81556650 | None:intergenic |
| ATGGTGTAGCAGTACCCTTC+TGG | 0.398459 | 7_3:+81556528 | Msa1129580:intron |
| TACCTCAAATCTTCTGATGA+TGG | 0.413883 | 7_3:+81556951 | Msa1129580:CDS |
| TATTTAATAATAATCATAAG+AGG | 0.419758 | 7_3:+81554142 | Msa1129580:five_prime_UTR |
| TGGATAGTAGGCTGCCATCA+TGG | 0.422967 | 7_3:-81554228 | None:intergenic |
| CAACATTGGGTTCTGGTGGT+GGG | 0.423263 | 7_3:+81556790 | Msa1129580:CDS |
| GATGCAGGGTCAGCAGCAGC+AGG | 0.427997 | 7_3:+81556560 | Msa1129580:CDS |
| GGTGACGTTGTTTGGATAGT+AGG | 0.433249 | 7_3:-81554240 | None:intergenic |
| AGTGGCAAGCAACAAGAGAT+TGG | 0.434502 | 7_3:+81556870 | Msa1129580:CDS |
| GGTTTGCACAGAAGTCTTAT+GGG | 0.434506 | 7_3:+81556843 | Msa1129580:CDS |
| CACCACTGATCACATTCAAC+AGG | 0.436615 | 7_3:+81554259 | Msa1129580:CDS |
| TTGCAAGAAGAGAACTCAAA+AGG | 0.437518 | 7_3:+81553983 | Msa1129580:five_prime_UTR |
| CATCAGAAGATTTGAGGTAA+AGG | 0.438000 | 7_3:-81556947 | None:intergenic |
| GGTCGAGGCGGTGGTGGTGA+AGG | 0.439472 | 7_3:+81556915 | Msa1129580:CDS |
| TCCCATCATCAGAAGATTTG+AGG | 0.441249 | 7_3:-81556953 | None:intergenic |
| CCGGCCATGGTTGGTGGTTG+AGG | 0.446740 | 7_3:-81556407 | None:intergenic |
| TAGCAGTACCCTTCTGGTGG+TGG | 0.451363 | 7_3:+81556534 | Msa1129580:intron |
| GGATAGTAGGCTGCCATCAT+GGG | 0.463215 | 7_3:-81554227 | None:intergenic |
| AGTAGCTCAACATTGGGTTC+TGG | 0.464044 | 7_3:+81556783 | Msa1129580:CDS |
| TCCCACGTTCATATTGCTAC+AGG | 0.468413 | 7_3:-81556754 | None:intergenic |
| AATTAGTTATTTAGTTAGCT+AGG | 0.469547 | 7_3:+81557061 | Msa1129580:three_prime_UTR |
| ACCACCAACCATGGCCGGTC+AGG | 0.472281 | 7_3:+81556412 | Msa1129580:CDS |
| GAGAGAGAGAGCATTGGGGT+TGG | 0.473989 | 7_3:-81553899 | None:intergenic |
| GACACAACAACAACAGCTAA+TGG | 0.478063 | 7_3:+81556614 | Msa1129580:CDS |
| TCTAGATCAATTAGCTAGCT+AGG | 0.481431 | 7_3:+81557095 | Msa1129580:three_prime_UTR |
| GCACTTCAACAGCATCAACT+TGG | 0.489725 | 7_3:+81556690 | Msa1129580:CDS |
| TTCATCCGCGGTGGAGGAGA+GGG | 0.494151 | 7_3:+81556822 | Msa1129580:CDS |
| TGCTGTTGAAGTGCTGAGTA+AGG | 0.496707 | 7_3:-81556681 | None:intergenic |
| ACCTCAAATCTTCTGATGAT+GGG | 0.498318 | 7_3:+81556952 | Msa1129580:CDS |
| CCTGACTTCATCCGCGGTGG+AGG | 0.498540 | 7_3:+81556816 | Msa1129580:CDS |
| TCCAAAGGAAACACAGGTGC+AGG | 0.499472 | 7_3:-81554042 | None:intergenic |
| TCGGATCAAGGTCGAGGCGG+TGG | 0.500503 | 7_3:+81556906 | Msa1129580:CDS |
| ATTGTAGAGAGTCAGAATTC+GGG | 0.501834 | 7_3:+81555864 | Msa1129580:CDS |
| TGTTTCTACCTGACCGGCCA+TGG | 0.501985 | 7_3:-81556420 | None:intergenic |
| ACCTGACCGGCCATGGTTGG+TGG | 0.503390 | 7_3:-81556413 | None:intergenic |
| GTGGCAAGCAACAAGAGATT+GGG | 0.506357 | 7_3:+81556871 | Msa1129580:CDS |
| GAGTGAGAGACAAGAAAGAA+AGG | 0.506535 | 7_3:+81553874 | Msa1129580:five_prime_UTR |
| CAGCATCAACTTGGAGGCGG+TGG | 0.509178 | 7_3:+81556699 | Msa1129580:CDS |
| AGAAGTCTTATGGGAGGTAG+TGG | 0.518354 | 7_3:+81556852 | Msa1129580:CDS |
| GATCAAGGTCGAGGCGGTGG+TGG | 0.520726 | 7_3:+81556909 | Msa1129580:CDS |
| GATTGGGATGAGTTCTTCAT+CGG | 0.525078 | 7_3:+81556887 | Msa1129580:CDS |
| TGCAAGAAGAGAACTCAAAA+GGG | 0.527986 | 7_3:+81553984 | Msa1129580:five_prime_UTR |
| AGCTCAACATTGGGTTCTGG+TGG | 0.534520 | 7_3:+81556786 | Msa1129580:CDS |
| ATTTAATAATAATCATAAGA+GGG | 0.546721 | 7_3:+81554143 | Msa1129580:five_prime_UTR |
| ATGAGTTCTTCATCGGATCA+AGG | 0.547272 | 7_3:+81556894 | Msa1129580:CDS |
| CTTCATCCGCGGTGGAGGAG+AGG | 0.548468 | 7_3:+81556821 | Msa1129580:CDS |
| AGGAGGTAGTAGCTCAACAT+TGG | 0.549524 | 7_3:+81556776 | Msa1129580:CDS |
| CGAGGCGGTGGTGGTGAAGG+CGG | 0.550384 | 7_3:+81556918 | Msa1129580:CDS |
| GGAGGTAGTAGCTCAACATT+GGG | 0.550428 | 7_3:+81556777 | Msa1129580:CDS |
| AGCAATATGAACGTGGGAGG+AGG | 0.551007 | 7_3:+81556759 | Msa1129580:CDS |
| CCTCAACCACCAACCATGGC+CGG | 0.554155 | 7_3:+81556407 | Msa1129580:CDS |
| CTTCAACAGCATCAACTTGG+AGG | 0.554957 | 7_3:+81556693 | Msa1129580:CDS |
| TCTACCTGACCGGCCATGGT+TGG | 0.555887 | 7_3:-81556416 | None:intergenic |
| ACAAAGTATTTGAAGTGCAG+AGG | 0.575929 | 7_3:-81554069 | None:intergenic |
| TGCGTGTGTTTCTACCTGAC+CGG | 0.576751 | 7_3:-81556426 | None:intergenic |
| TGCATCACTCCACCACCAGA+AGG | 0.580900 | 7_3:-81556543 | None:intergenic |
| TCTGGTGGTGGAGTGATGCA+GGG | 0.593405 | 7_3:+81556546 | Msa1129580:CDS |
| TCTTCATCGGATCAAGGTCG+AGG | 0.593840 | 7_3:+81556900 | Msa1129580:CDS |
| GAGAATCAGCTATTGCAGCT+AGG | 0.595794 | 7_3:-81556382 | None:intergenic |
| GGAAGATCCAAAGGAAACAC+AGG | 0.600293 | 7_3:-81554048 | None:intergenic |
| TTTCCTGACTTCATCCGCGG+TGG | 0.603311 | 7_3:+81556813 | Msa1129580:CDS |
| AACATATCAGGAATCAAGCA+AGG | 0.610316 | 7_3:+81556339 | Msa1129580:intron |
| GGGTTTCCTGACTTCATCCG+CGG | 0.614235 | 7_3:+81556810 | Msa1129580:CDS |
| AAGTGCAGAGGAAGATCCAA+AGG | 0.614691 | 7_3:-81554057 | None:intergenic |
| GCCTGTAGCAATATGAACGT+GGG | 0.617388 | 7_3:+81556753 | Msa1129580:CDS |
| GGGAGGAGCACACTACATGC+AGG | 0.618698 | 7_3:+81556581 | Msa1129580:CDS |
| TCAACCTCAACCACCAACCA+TGG | 0.620168 | 7_3:+81556403 | Msa1129580:CDS |
| ATGCAGGGTCAGCAGCAGCA+GGG | 0.624777 | 7_3:+81556561 | Msa1129580:CDS |
| CTGTTGCTGCGCGAATAGAA+GGG | 0.627676 | 7_3:-81556649 | None:intergenic |
| CAACAGCATCAACTTGGAGG+CGG | 0.642913 | 7_3:+81556696 | Msa1129580:CDS |
| AGAGGGAGATATATAGCTAG+TGG | 0.646141 | 7_3:+81554160 | Msa1129580:five_prime_UTR |
| GATGCAGATGCAGCCCATGA+TGG | 0.647712 | 7_3:+81554214 | Msa1129580:CDS |
| GCATCACTCCACCACCAGAA+GGG | 0.647825 | 7_3:-81556542 | None:intergenic |
| GTGTAGCAGTACCCTTCTGG+TGG | 0.652208 | 7_3:+81556531 | Msa1129580:intron |
| AATTAAGCACAAGATAAACA+AGG | 0.654592 | 7_3:-81557152 | None:intergenic |
| CAGGGTCAGCAGCAGCAGGG+AGG | 0.660642 | 7_3:+81556564 | Msa1129580:CDS |
| AGCCTGTAGCAATATGAACG+TGG | 0.662936 | 7_3:+81556752 | Msa1129580:CDS |
| TGTAGCAATATGAACGTGGG+AGG | 0.675964 | 7_3:+81556756 | Msa1129580:CDS |
| TTGCACAGAAGTCTTATGGG+AGG | 0.683269 | 7_3:+81556846 | Msa1129580:CDS |
| TTGCTGCGCGAATAGAAGGG+AGG | 0.689392 | 7_3:-81556646 | None:intergenic |
| TCATCGGATCAAGGTCGAGG+CGG | 0.718041 | 7_3:+81556903 | Msa1129580:CDS |
| AACCTGTTGAATGTGATCAG+TGG | 0.722866 | 7_3:-81554261 | None:intergenic |
| GCAAACCCTCTCCTCCACCG+CGG | 0.734679 | 7_3:-81556827 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAAAATAATATAACGA+TGG | - | chr7_3:81554124-81554143 | None:intergenic | 10.0% |
| !! | TATTTAATAATAATCATAAG+AGG | + | chr7_3:81554142-81554161 | Msa1129580:five_prime_UTR | 10.0% |
| !! | ATTTAATAATAATCATAAGA+GGG | + | chr7_3:81554143-81554162 | Msa1129580:five_prime_UTR | 10.0% |
| !! | TAAAAAATAATTTCTTCATT+AGG | + | chr7_3:81555179-81555198 | Msa1129580:intron | 10.0% |
| !!! | ATGAATCTAATTTTATTTAA+CGG | + | chr7_3:81556134-81556153 | Msa1129580:intron | 10.0% |
| !! | ATTGAATTCAATTGATATAT+AGG | - | chr7_3:81555931-81555950 | None:intergenic | 15.0% |
| !!! | TTCATTAATTTTATGATATG+AGG | + | chr7_3:81555961-81555980 | Msa1129580:intron | 15.0% |
| !!! | TTTTCTATCTTTTCAATATT+GGG | - | chr7_3:81555987-81556006 | None:intergenic | 15.0% |
| !!! | TTTTTCTATCTTTTCAATAT+TGG | - | chr7_3:81555988-81556007 | None:intergenic | 15.0% |
| !! | AATATTGAAAAGATAGAAAA+AGG | + | chr7_3:81555987-81556006 | Msa1129580:intron | 15.0% |
| !!! | ACATTGTGATATAATTTTTT+TGG | + | chr7_3:81556448-81556467 | Msa1129580:intron | 15.0% |
| !!! | TCATAAAATCTTACCATTTT+AGG | - | chr7_3:81555113-81555132 | None:intergenic | 20.0% |
| !! | TCATCATTTGTAATTAGAAA+TGG | + | chr7_3:81555428-81555447 | Msa1129580:intron | 20.0% |
| !!! | ATCTAATTTTATTTAACGGT+TGG | + | chr7_3:81556138-81556157 | Msa1129580:intron | 20.0% |
| !!! | TCTAATTTTATTTAACGGTT+GGG | + | chr7_3:81556139-81556158 | Msa1129580:intron | 20.0% |
| !! | GTATATATGTGTTTATGTAT+CGG | - | chr7_3:81556218-81556237 | None:intergenic | 20.0% |
| !!! | GTTTAATCATTGATTATTGA+TGG | + | chr7_3:81556509-81556528 | Msa1129580:intron | 20.0% |
| !! | AATTAGTTATTTAGTTAGCT+AGG | + | chr7_3:81557061-81557080 | Msa1129580:three_prime_UTR | 20.0% |
| !! | CTTAATTAAGGTAAACTATT+TGG | + | chr7_3:81557168-81557187 | Msa1129580:three_prime_UTR | 20.0% |
| ! | ATAAGCAAGGAAATTAAAGA+AGG | - | chr7_3:81554328-81554347 | None:intergenic | 25.0% |
| ! | TATTACACATCACTTGTATA+TGG | + | chr7_3:81554401-81554420 | Msa1129580:intron | 25.0% |
| !!! | ACCATTTCATGACTATTTTT+GGG | - | chr7_3:81555358-81555377 | None:intergenic | 25.0% |
| !! | AACCATTTCATGACTATTTT+TGG | - | chr7_3:81555359-81555378 | None:intergenic | 25.0% |
| ! | TTGCATAAAATAAGAGAAGA+GGG | - | chr7_3:81555527-81555546 | None:intergenic | 25.0% |
| ! | AAATATGCAAACGAATTAAC+CGG | - | chr7_3:81555758-81555777 | None:intergenic | 25.0% |
| ! | GGTTGTGTAAAATAAGTAAA+AGG | - | chr7_3:81555809-81555828 | None:intergenic | 25.0% |
| !! | AATTATGCTTGTATTCCTTT+TGG | + | chr7_3:81556068-81556087 | Msa1129580:intron | 25.0% |
| !! | ATTATGCTTGTATTCCTTTT+GGG | + | chr7_3:81556069-81556088 | Msa1129580:intron | 25.0% |
| ! | ATGAAGTTTCAGTTCTATAT+GGG | - | chr7_3:81556182-81556201 | None:intergenic | 25.0% |
| ! | TATGAAGTTTCAGTTCTATA+TGG | - | chr7_3:81556183-81556202 | None:intergenic | 25.0% |
| ! | GAACTGAAACTTCATATATA+AGG | + | chr7_3:81556187-81556206 | Msa1129580:intron | 25.0% |
| ! | AATTAAGCACAAGATAAACA+AGG | - | chr7_3:81557155-81557174 | None:intergenic | 25.0% |
| ! | GTTTATCTTGTGCTTAATTA+AGG | + | chr7_3:81557156-81557175 | Msa1129580:three_prime_UTR | 25.0% |
| ACATCACTTGTATATGGATA+TGG | + | chr7_3:81554407-81554426 | Msa1129580:intron | 30.0% | |
| ! | GAGAATATTTTGCAGACATA+AGG | - | chr7_3:81554742-81554761 | None:intergenic | 30.0% |
| ACAAAAATGAATCCAACCAA+AGG | - | chr7_3:81554828-81554847 | None:intergenic | 30.0% | |
| TATACATTCTTATCTCAGGT+AGG | - | chr7_3:81554882-81554901 | None:intergenic | 30.0% | |
| GTCATATACATTCTTATCTC+AGG | - | chr7_3:81554886-81554905 | None:intergenic | 30.0% | |
| TAAGATATGTGAACATAGAG+AGG | - | chr7_3:81554914-81554933 | None:intergenic | 30.0% | |
| TGGTTTGATAAAGACAAAGA+AGG | - | chr7_3:81554963-81554982 | None:intergenic | 30.0% | |
| AAAGAAACAAGTAGTAGTGT+TGG | - | chr7_3:81554983-81555002 | None:intergenic | 30.0% | |
| TCCCAAAAATAGTCATGAAA+TGG | + | chr7_3:81555354-81555373 | Msa1129580:intron | 30.0% | |
| TAATTAGAAATGGTTGCCTT+GGG | + | chr7_3:81555438-81555457 | Msa1129580:intron | 30.0% | |
| CTAACGTCTTATATCCTAAA+TGG | + | chr7_3:81555464-81555483 | Msa1129580:intron | 30.0% | |
| AAAGTAAGCAAACTCCATTT+AGG | - | chr7_3:81555481-81555500 | None:intergenic | 30.0% | |
| ! | ACTTTGAAAGTAAGCAAACT+AGG | + | chr7_3:81555496-81555515 | Msa1129580:intron | 30.0% |
| CTTGCATAAAATAAGAGAAG+AGG | - | chr7_3:81555528-81555547 | None:intergenic | 30.0% | |
| GGATGTTTGAAAGAGAAAAT+TGG | - | chr7_3:81555573-81555592 | None:intergenic | 30.0% | |
| !!! | CACATGTTTTAACACAACAA+CGG | - | chr7_3:81555599-81555618 | None:intergenic | 30.0% |
| TTTCAACACTCACTCTAATT+GGG | - | chr7_3:81555679-81555698 | None:intergenic | 30.0% | |
| ! | TTTTCAACACTCACTCTAAT+TGG | - | chr7_3:81555680-81555699 | None:intergenic | 30.0% |
| ! | TATTTTACACAACCAGTACT+TGG | + | chr7_3:81555815-81555834 | Msa1129580:intron | 30.0% |
| GAATTAGACTACTACTTACT+CGG | - | chr7_3:81555907-81555926 | None:intergenic | 30.0% | |
| AGATAGAAAAAGGTAAGAGA+TGG | + | chr7_3:81555997-81556016 | Msa1129580:intron | 30.0% | |
| !!! | TTGTATTCCTTTTGGGATAA+AGG | + | chr7_3:81556076-81556095 | Msa1129580:intron | 30.0% |
| TAAAAGACATCAACGTGTTA+GGG | - | chr7_3:81556115-81556134 | None:intergenic | 30.0% | |
| ATAAAAGACATCAACGTGTT+AGG | - | chr7_3:81556116-81556135 | None:intergenic | 30.0% | |
| CATACATGTGATAACATATC+AGG | + | chr7_3:81556327-81556346 | Msa1129580:intron | 30.0% | |
| AAGCTAAAATGCATCTGAAT+TGG | - | chr7_3:81557033-81557052 | None:intergenic | 30.0% | |
| TTGCAAGAAGAGAACTCAAA+AGG | + | chr7_3:81553983-81554002 | Msa1129580:five_prime_UTR | 35.0% | |
| TGCAAGAAGAGAACTCAAAA+GGG | + | chr7_3:81553984-81554003 | Msa1129580:five_prime_UTR | 35.0% | |
| ! | ACAAAGTATTTGAAGTGCAG+AGG | - | chr7_3:81554072-81554091 | None:intergenic | 35.0% |
| GATATATGCAGACATAAGCA+AGG | - | chr7_3:81554341-81554360 | None:intergenic | 35.0% | |
| !! | AACAGAACAGCTTTGTTTGT+GGG | + | chr7_3:81554553-81554572 | Msa1129580:intron | 35.0% |
| TAAAGTGAAGAGAGTAAAGC+AGG | - | chr7_3:81554647-81554666 | None:intergenic | 35.0% | |
| !!! | GTCACTCACTTTTTTTTGCT+TGG | + | chr7_3:81555022-81555041 | Msa1129580:intron | 35.0% |
| GTAATTAGAAATGGTTGCCT+TGG | + | chr7_3:81555437-81555456 | Msa1129580:intron | 35.0% | |
| ! | TATAAGACGTTAGTTTCCCA+AGG | - | chr7_3:81555457-81555476 | None:intergenic | 35.0% |
| !! | GTTTTAACACAACAACGGAA+TGG | - | chr7_3:81555594-81555613 | None:intergenic | 35.0% |
| GTGTTAAAACATGTGTGTCT+CGG | + | chr7_3:81555604-81555623 | Msa1129580:intron | 35.0% | |
| AGTGGAAACCATTTAGAGAA+TGG | + | chr7_3:81555633-81555652 | Msa1129580:intron | 35.0% | |
| AAACCATTTAGAGAATGGTG+AGG | + | chr7_3:81555638-81555657 | Msa1129580:intron | 35.0% | |
| TAACCTCACCATTCTCTAAA+TGG | - | chr7_3:81555644-81555663 | None:intergenic | 35.0% | |
| GATTGTAGAGAGTCAGAATT+CGG | + | chr7_3:81555863-81555882 | Msa1129580:CDS | 35.0% | |
| ATTGTAGAGAGTCAGAATTC+GGG | + | chr7_3:81555864-81555883 | Msa1129580:CDS | 35.0% | |
| TTCACATCCTTTATCCCAAA+AGG | - | chr7_3:81556086-81556105 | None:intergenic | 35.0% | |
| GAAACTTCATATATAAGGCG+TGG | + | chr7_3:81556192-81556211 | Msa1129580:intron | 35.0% | |
| AACATATCAGGAATCAAGCA+AGG | + | chr7_3:81556339-81556358 | Msa1129580:intron | 35.0% | |
| ! | CATCAGAAGATTTGAGGTAA+AGG | - | chr7_3:81556950-81556969 | None:intergenic | 35.0% |
| TACCTCAAATCTTCTGATGA+TGG | + | chr7_3:81556951-81556970 | Msa1129580:CDS | 35.0% | |
| ACCTCAAATCTTCTGATGAT+GGG | + | chr7_3:81556952-81556971 | Msa1129580:CDS | 35.0% | |
| TTAGCTGTTCAGATCGAATT+TGG | + | chr7_3:81556988-81557007 | Msa1129580:three_prime_UTR | 35.0% | |
| TCTAGATCAATTAGCTAGCT+AGG | + | chr7_3:81557095-81557114 | Msa1129580:three_prime_UTR | 35.0% | |
| GAGTGAGAGACAAGAAAGAA+AGG | + | chr7_3:81553874-81553893 | Msa1129580:five_prime_UTR | 40.0% | |
| AGAGGGAGATATATAGCTAG+TGG | + | chr7_3:81554160-81554179 | Msa1129580:five_prime_UTR | 40.0% | |
| AACCTGTTGAATGTGATCAG+TGG | - | chr7_3:81554264-81554283 | None:intergenic | 40.0% | |
| TTACACACAACACAACTTGC+TGG | + | chr7_3:81554486-81554505 | Msa1129580:intron | 40.0% | |
| TTCTACTGCTCAGCACAAAA+GGG | - | chr7_3:81554535-81554554 | None:intergenic | 40.0% | |
| !! | GAACAGAACAGCTTTGTTTG+TGG | + | chr7_3:81554552-81554571 | Msa1129580:intron | 40.0% |
| TATACCCTCACTTGTTTGCT+AGG | + | chr7_3:81554684-81554703 | Msa1129580:intron | 40.0% | |
| TCTACCTAGCAAACAAGTGA+GGG | - | chr7_3:81554691-81554710 | None:intergenic | 40.0% | |
| ATCTACCTAGCAAACAAGTG+AGG | - | chr7_3:81554692-81554711 | None:intergenic | 40.0% | |
| ATGCTCTAGCTAATCCTTAG+TGG | + | chr7_3:81554710-81554729 | Msa1129580:intron | 40.0% | |
| AAATGAATCCAACCAAAGGC+AGG | - | chr7_3:81554824-81554843 | None:intergenic | 40.0% | |
| GCTTACCAAGTCTCTTAAGT+GGG | - | chr7_3:81555089-81555108 | None:intergenic | 40.0% | |
| TGCTTACCAAGTCTCTTAAG+TGG | - | chr7_3:81555090-81555109 | None:intergenic | 40.0% | |
| ! | GACTTGGTAAGCACCTAAAA+TGG | + | chr7_3:81555097-81555116 | Msa1129580:intron | 40.0% |
| CTCTCATTGTGTCCCAAAAT+AGG | + | chr7_3:81555319-81555338 | Msa1129580:intron | 40.0% | |
| TCATTGTGTCCCAAAATAGG+AGG | + | chr7_3:81555322-81555341 | Msa1129580:intron | 40.0% | |
| CATTGTGTCCCAAAATAGGA+GGG | + | chr7_3:81555323-81555342 | Msa1129580:intron | 40.0% | |
| AAACGAATTAACCGGTGGAA+GGG | - | chr7_3:81555750-81555769 | None:intergenic | 40.0% | |
| TATGCAAACGAATTAACCGG+TGG | - | chr7_3:81555755-81555774 | None:intergenic | 40.0% | |
| ACTTGTTCTCATCCAAGTAC+TGG | - | chr7_3:81555830-81555849 | None:intergenic | 40.0% | |
| ACACGTTGACAAGTCGATAT+TGG | - | chr7_3:81556271-81556290 | None:intergenic | 40.0% | |
| TGTCAACGTGTCTGCTTATT+AGG | + | chr7_3:81556280-81556299 | Msa1129580:intron | 40.0% | |
| GACACAACAACAACAGCTAA+TGG | + | chr7_3:81556614-81556633 | Msa1129580:CDS | 40.0% | |
| ! | GGTTTGCACAGAAGTCTTAT+GGG | + | chr7_3:81556843-81556862 | Msa1129580:CDS | 40.0% |
| GATTGGGATGAGTTCTTCAT+CGG | + | chr7_3:81556887-81556906 | Msa1129580:CDS | 40.0% | |
| ATGAGTTCTTCATCGGATCA+AGG | + | chr7_3:81556894-81556913 | Msa1129580:CDS | 40.0% | |
| TCCCATCATCAGAAGATTTG+AGG | - | chr7_3:81556956-81556975 | None:intergenic | 40.0% | |
| !! | AGAGAGAGAGAGAGAGCATT+GGG | - | chr7_3:81553907-81553926 | None:intergenic | 45.0% |
| GGAAGATCCAAAGGAAACAC+AGG | - | chr7_3:81554051-81554070 | None:intergenic | 45.0% | |
| AAGTGCAGAGGAAGATCCAA+AGG | - | chr7_3:81554060-81554079 | None:intergenic | 45.0% | |
| GGTGACGTTGTTTGGATAGT+AGG | - | chr7_3:81554243-81554262 | None:intergenic | 45.0% | |
| ! | TGATCAGTGGTGACGTTGTT+TGG | - | chr7_3:81554251-81554270 | None:intergenic | 45.0% |
| CACCACTGATCACATTCAAC+AGG | + | chr7_3:81554259-81554278 | Msa1129580:CDS | 45.0% | |
| GTTCTACTGCTCAGCACAAA+AGG | - | chr7_3:81554536-81554555 | None:intergenic | 45.0% | |
| GTGAAGAGAGTAAAGCAGGT+AGG | - | chr7_3:81554643-81554662 | None:intergenic | 45.0% | |
| TGCTTCCCACTTAAGAGACT+TGG | + | chr7_3:81555081-81555100 | Msa1129580:intron | 45.0% | |
| ! | ATGCTTATAGAGTACCCCGA+CGG | + | chr7_3:81555203-81555222 | Msa1129580:intron | 45.0% |
| ! | ATCTTGTTAACGAGTGCCGT+CGG | - | chr7_3:81555222-81555241 | None:intergenic | 45.0% |
| TGTCCCAAAATAGGAGGGAA+AGG | + | chr7_3:81555328-81555347 | Msa1129580:intron | 45.0% | |
| ! | CAGCCTTTCCCTCCTATTTT+GGG | - | chr7_3:81555334-81555353 | None:intergenic | 45.0% |
| ! | ACAGCCTTTCCCTCCTATTT+TGG | - | chr7_3:81555335-81555354 | None:intergenic | 45.0% |
| TTTGTCACTATCCCTTCCAC+CGG | + | chr7_3:81555736-81555755 | Msa1129580:intron | 45.0% | |
| CAAACGAATTAACCGGTGGA+AGG | - | chr7_3:81555751-81555770 | None:intergenic | 45.0% | |
| TACGTAGCAGCATCAGAAGA+TGG | - | chr7_3:81556034-81556053 | None:intergenic | 45.0% | |
| GAGAATCAGCTATTGCAGCT+AGG | - | chr7_3:81556385-81556404 | None:intergenic | 45.0% | |
| !! | TGCTGTTGAAGTGCTGAGTA+AGG | - | chr7_3:81556684-81556703 | None:intergenic | 45.0% |
| GCACTTCAACAGCATCAACT+TGG | + | chr7_3:81556690-81556709 | Msa1129580:CDS | 45.0% | |
| CTTCAACAGCATCAACTTGG+AGG | + | chr7_3:81556693-81556712 | Msa1129580:CDS | 45.0% | |
| AGCCTGTAGCAATATGAACG+TGG | + | chr7_3:81556752-81556771 | Msa1129580:CDS | 45.0% | |
| GCCTGTAGCAATATGAACGT+GGG | + | chr7_3:81556753-81556772 | Msa1129580:CDS | 45.0% | |
| TCCCACGTTCATATTGCTAC+AGG | - | chr7_3:81556757-81556776 | None:intergenic | 45.0% | |
| TGTAGCAATATGAACGTGGG+AGG | + | chr7_3:81556756-81556775 | Msa1129580:CDS | 45.0% | |
| AGGAGGTAGTAGCTCAACAT+TGG | + | chr7_3:81556776-81556795 | Msa1129580:CDS | 45.0% | |
| GGAGGTAGTAGCTCAACATT+GGG | + | chr7_3:81556777-81556796 | Msa1129580:CDS | 45.0% | |
| AGTAGCTCAACATTGGGTTC+TGG | + | chr7_3:81556783-81556802 | Msa1129580:CDS | 45.0% | |
| GGGTTTGCACAGAAGTCTTA+TGG | + | chr7_3:81556842-81556861 | Msa1129580:CDS | 45.0% | |
| ! | TTGCACAGAAGTCTTATGGG+AGG | + | chr7_3:81556846-81556865 | Msa1129580:CDS | 45.0% |
| ! | AGAAGTCTTATGGGAGGTAG+TGG | + | chr7_3:81556852-81556871 | Msa1129580:CDS | 45.0% |
| AGTGGCAAGCAACAAGAGAT+TGG | + | chr7_3:81556870-81556889 | Msa1129580:CDS | 45.0% | |
| GTGGCAAGCAACAAGAGATT+GGG | + | chr7_3:81556871-81556890 | Msa1129580:CDS | 45.0% | |
| !! | AAATAAAATAAAATAAATGA+AGG | - | chr7_3:81554368-81554387 | None:intergenic | 5.0% |
| !! | AATATAATAGTAATAAATAA+AGG | - | chr7_3:81554615-81554634 | None:intergenic | 5.0% |
| !! | AGAGAGAGAGCATTGGGGTT+GGG | - | chr7_3:81553901-81553920 | None:intergenic | 50.0% |
| !! | GAGAGAGAGAGAGAGCATTG+GGG | - | chr7_3:81553906-81553925 | None:intergenic | 50.0% |
| ! | GAGAGAGAGAGAGAGAGCAT+TGG | - | chr7_3:81553908-81553927 | None:intergenic | 50.0% |
| ACCTGCACCTGTGTTTCCTT+TGG | + | chr7_3:81554041-81554060 | Msa1129580:five_prime_UTR | 50.0% | |
| TCCAAAGGAAACACAGGTGC+AGG | - | chr7_3:81554045-81554064 | None:intergenic | 50.0% | |
| GGATAGTAGGCTGCCATCAT+GGG | - | chr7_3:81554230-81554249 | None:intergenic | 50.0% | |
| TGGATAGTAGGCTGCCATCA+TGG | - | chr7_3:81554231-81554250 | None:intergenic | 50.0% | |
| TGGCATCTTTCTGTGCTTCC+TGG | + | chr7_3:81554506-81554525 | Msa1129580:intron | 50.0% | |
| GGCATCTTTCTGTGCTTCCT+GGG | + | chr7_3:81554507-81554526 | Msa1129580:intron | 50.0% | |
| GCATCTTTCTGTGCTTCCTG+GGG | + | chr7_3:81554508-81554527 | Msa1129580:intron | 50.0% | |
| CATCTTTCTGTGCTTCCTGG+GGG | + | chr7_3:81554509-81554528 | Msa1129580:intron | 50.0% | |
| ACATAAGGCAGCAGCCACTA+AGG | - | chr7_3:81554727-81554746 | None:intergenic | 50.0% | |
| GGGTGGGTGAGTTATAGAGT+GGG | - | chr7_3:81554794-81554813 | None:intergenic | 50.0% | |
| TGGGTGGGTGAGTTATAGAG+TGG | - | chr7_3:81554795-81554814 | None:intergenic | 50.0% | |
| AATCCAACCAAAGGCAGGCA+GGG | - | chr7_3:81554819-81554838 | None:intergenic | 50.0% | |
| TTATCTCAGGTAGGAGCAGC+AGG | - | chr7_3:81554873-81554892 | None:intergenic | 50.0% | |
| ! | TCTTGTTAACGAGTGCCGTC+GGG | - | chr7_3:81555221-81555240 | None:intergenic | 50.0% |
| TGTGTGTCTCGGCTCTTAAG+TGG | + | chr7_3:81555615-81555634 | Msa1129580:intron | 50.0% | |
| ! | GGTTGGGTTGCTGAAGTGAA+GGG | + | chr7_3:81556155-81556174 | Msa1129580:intron | 50.0% |
| TCAACCTCAACCACCAACCA+TGG | + | chr7_3:81556403-81556422 | Msa1129580:CDS | 50.0% | |
| ! | TGCGTGTGTTTCTACCTGAC+CGG | - | chr7_3:81556429-81556448 | None:intergenic | 50.0% |
| ATGGTGTAGCAGTACCCTTC+TGG | + | chr7_3:81556528-81556547 | Msa1129580:intron | 50.0% | |
| CTGTTGCTGCGCGAATAGAA+GGG | - | chr7_3:81556652-81556671 | None:intergenic | 50.0% | |
| CAACAGCATCAACTTGGAGG+CGG | + | chr7_3:81556696-81556715 | Msa1129580:CDS | 50.0% | |
| AGCAATATGAACGTGGGAGG+AGG | + | chr7_3:81556759-81556778 | Msa1129580:CDS | 50.0% | |
| ! | AGCTCAACATTGGGTTCTGG+TGG | + | chr7_3:81556786-81556805 | Msa1129580:CDS | 50.0% |
| ! | TCAACATTGGGTTCTGGTGG+TGG | + | chr7_3:81556789-81556808 | Msa1129580:CDS | 50.0% |
| ! | CAACATTGGGTTCTGGTGGT+GGG | + | chr7_3:81556790-81556809 | Msa1129580:CDS | 50.0% |
| TCTTCATCGGATCAAGGTCG+AGG | + | chr7_3:81556900-81556919 | Msa1129580:CDS | 50.0% | |
| !! | GAGAGAGAGCATTGGGGTTG+GGG | - | chr7_3:81553900-81553919 | None:intergenic | 55.0% |
| !! | GAGAGAGAGAGCATTGGGGT+TGG | - | chr7_3:81553902-81553921 | None:intergenic | 55.0% |
| ! | TCATGGGCTGCATCTGCATC+AGG | - | chr7_3:81554214-81554233 | None:intergenic | 55.0% |
| GATGCAGATGCAGCCCATGA+TGG | + | chr7_3:81554214-81554233 | Msa1129580:CDS | 55.0% | |
| TAGAGTGGGCACAGTGCAAC+TGG | - | chr7_3:81554780-81554799 | None:intergenic | 55.0% | |
| AACCAAAGGCAGGCAGGGAT+GGG | - | chr7_3:81554814-81554833 | None:intergenic | 55.0% | |
| GAATCCAACCAAAGGCAGGC+AGG | - | chr7_3:81554820-81554839 | None:intergenic | 55.0% | |
| ! | CTTGTTAACGAGTGCCGTCG+GGG | - | chr7_3:81555220-81555239 | None:intergenic | 55.0% |
| ! | CGGTTGGGTTGCTGAAGTGA+AGG | + | chr7_3:81556154-81556173 | Msa1129580:intron | 55.0% |
| ! | TGTTTCTACCTGACCGGCCA+TGG | - | chr7_3:81556423-81556442 | None:intergenic | 55.0% |
| GTGTAGCAGTACCCTTCTGG+TGG | + | chr7_3:81556531-81556550 | Msa1129580:intron | 55.0% | |
| TAGCAGTACCCTTCTGGTGG+TGG | + | chr7_3:81556534-81556553 | Msa1129580:intron | 55.0% | |
| GCATCACTCCACCACCAGAA+GGG | - | chr7_3:81556545-81556564 | None:intergenic | 55.0% | |
| TGCATCACTCCACCACCAGA+AGG | - | chr7_3:81556546-81556565 | None:intergenic | 55.0% | |
| !! | TTCTGGTGGTGGAGTGATGC+AGG | + | chr7_3:81556545-81556564 | Msa1129580:CDS | 55.0% |
| !! | TCTGGTGGTGGAGTGATGCA+GGG | + | chr7_3:81556546-81556565 | Msa1129580:CDS | 55.0% |
| TTGCTGCGCGAATAGAAGGG+AGG | - | chr7_3:81556649-81556668 | None:intergenic | 55.0% | |
| GCTGTTGCTGCGCGAATAGA+AGG | - | chr7_3:81556653-81556672 | None:intergenic | 55.0% | |
| GGGTTTCCTGACTTCATCCG+CGG | + | chr7_3:81556810-81556829 | Msa1129580:CDS | 55.0% | |
| TTTCCTGACTTCATCCGCGG+TGG | + | chr7_3:81556813-81556832 | Msa1129580:CDS | 55.0% | |
| TCATCGGATCAAGGTCGAGG+CGG | + | chr7_3:81556903-81556922 | Msa1129580:CDS | 55.0% | |
| AAAGGCAGGCAGGGATGGGT+GGG | - | chr7_3:81554810-81554829 | None:intergenic | 60.0% | |
| CAACCAAAGGCAGGCAGGGA+TGG | - | chr7_3:81554815-81554834 | None:intergenic | 60.0% | |
| CATCCCTGCCTGCCTTTGGT+TGG | + | chr7_3:81554813-81554832 | Msa1129580:intron | 60.0% | |
| CCTCAACCACCAACCATGGC+CGG | + | chr7_3:81556407-81556426 | Msa1129580:CDS | 60.0% | |
| TCTACCTGACCGGCCATGGT+TGG | - | chr7_3:81556419-81556438 | None:intergenic | 60.0% | |
| ATGCAGGGTCAGCAGCAGCA+GGG | + | chr7_3:81556561-81556580 | Msa1129580:CDS | 60.0% | |
| ! | GGGAGGAGCACACTACATGC+AGG | + | chr7_3:81556581-81556600 | Msa1129580:CDS | 60.0% |
| CAGCATCAACTTGGAGGCGG+TGG | + | chr7_3:81556699-81556718 | Msa1129580:CDS | 60.0% | |
| CTTGGAGGCGGTGGAACTTC+AGG | + | chr7_3:81556708-81556727 | Msa1129580:CDS | 60.0% | |
| TTCATCCGCGGTGGAGGAGA+GGG | + | chr7_3:81556822-81556841 | Msa1129580:CDS | 60.0% | |
| CTCAGCACAAAAGGGCCCCC+AGG | - | chr7_3:81554527-81554546 | None:intergenic | 65.0% | |
| CAAAGGCAGGCAGGGATGGG+TGG | - | chr7_3:81554811-81554830 | None:intergenic | 65.0% | |
| CACCCATCCCTGCCTGCCTT+TGG | + | chr7_3:81554809-81554828 | Msa1129580:intron | 65.0% | |
| !! | CCGGCCATGGTTGGTGGTTG+AGG | - | chr7_3:81556410-81556429 | None:intergenic | 65.0% |
| ACCACCAACCATGGCCGGTC+AGG | + | chr7_3:81556412-81556431 | Msa1129580:CDS | 65.0% | |
| ACCTGACCGGCCATGGTTGG+TGG | - | chr7_3:81556416-81556435 | None:intergenic | 65.0% | |
| GATGCAGGGTCAGCAGCAGC+AGG | + | chr7_3:81556560-81556579 | Msa1129580:CDS | 65.0% | |
| CCTCCACCGCGGATGAAGTC+AGG | - | chr7_3:81556819-81556838 | None:intergenic | 65.0% | |
| CCTGACTTCATCCGCGGTGG+AGG | + | chr7_3:81556816-81556835 | Msa1129580:CDS | 65.0% | |
| CTTCATCCGCGGTGGAGGAG+AGG | + | chr7_3:81556821-81556840 | Msa1129580:CDS | 65.0% | |
| GCAAACCCTCTCCTCCACCG+CGG | - | chr7_3:81556830-81556849 | None:intergenic | 65.0% | |
| TCGGATCAAGGTCGAGGCGG+TGG | + | chr7_3:81556906-81556925 | Msa1129580:CDS | 65.0% | |
| GATCAAGGTCGAGGCGGTGG+TGG | + | chr7_3:81556909-81556928 | Msa1129580:CDS | 65.0% | |
| CAGGGTCAGCAGCAGCAGGG+AGG | + | chr7_3:81556564-81556583 | Msa1129580:CDS | 70.0% | |
| ! | GGTCGAGGCGGTGGTGGTGA+AGG | + | chr7_3:81556915-81556934 | Msa1129580:CDS | 70.0% |
| ! | CGAGGCGGTGGTGGTGAAGG+CGG | + | chr7_3:81556918-81556937 | Msa1129580:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 81553852 | 81557242 | 81553852 | ID=Msa1129580;Name=Msa1129580 |
| chr7_3 | mRNA | 81553852 | 81557242 | 81553852 | ID=Msa1129580-mRNA-1;Parent=Msa1129580;Name=Msa1129580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=348|0.66|0.75|1|1|1|4|262|228 |
| chr7_3 | exon | 81553852 | 81554280 | 81553852 | ID=Msa1129580-mRNA-1:exon:23709;Parent=Msa1129580-mRNA-1 |
| chr7_3 | exon | 81555831 | 81555907 | 81555831 | ID=Msa1129580-mRNA-1:exon:23710;Parent=Msa1129580-mRNA-1 |
| chr7_3 | exon | 81556349 | 81556433 | 81556349 | ID=Msa1129580-mRNA-1:exon:23711;Parent=Msa1129580-mRNA-1 |
| chr7_3 | exon | 81556537 | 81557242 | 81556537 | ID=Msa1129580-mRNA-1:exon:23712;Parent=Msa1129580-mRNA-1 |
| chr7_3 | five_prime_UTR | 81553852 | 81554199 | 81553852 | ID=Msa1129580-mRNA-1:five_prime_utr;Parent=Msa1129580-mRNA-1 |
| chr7_3 | CDS | 81554200 | 81554280 | 81554200 | ID=Msa1129580-mRNA-1:cds;Parent=Msa1129580-mRNA-1 |
| chr7_3 | CDS | 81555831 | 81555907 | 81555831 | ID=Msa1129580-mRNA-1:cds;Parent=Msa1129580-mRNA-1 |
| chr7_3 | CDS | 81556349 | 81556433 | 81556349 | ID=Msa1129580-mRNA-1:cds;Parent=Msa1129580-mRNA-1 |
| chr7_3 | CDS | 81556537 | 81556980 | 81556537 | ID=Msa1129580-mRNA-1:cds;Parent=Msa1129580-mRNA-1 |
| chr7_3 | three_prime_UTR | 81556981 | 81557242 | 81556981 | ID=Msa1129580-mRNA-1:three_prime_utr;Parent=Msa1129580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
