AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1278870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1278870 MtrunA17_Chr8g0348871 95.309 874 40 1 1 874 1 873 0.0 1698
Msa1278870 MtrunA17_Chr7g0247821 54.113 924 346 14 1 859 1 911 0.0 874
Msa1278870 MtrunA17_Chr1g0169831 30.198 202 115 9 671 850 674 871 4.59e-14 76.6
Msa1278870 MtrunA17_Chr2g0328111 30.814 172 100 7 695 851 524 691 2.14e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1278870 AT4G00440.2 32.159 880 465 29 1 836 1 792 1.25e-104 343
Msa1278870 AT4G00440.1 32.159 880 465 29 1 836 1 792 1.26e-104 343
Msa1278870 AT4G00440.5 32.159 880 465 29 1 836 1 792 1.26e-104 343
Msa1278870 AT4G00440.4 32.159 880 465 29 1 836 1 792 1.57e-104 343
Msa1278870 AT4G00440.3 32.159 880 465 29 1 836 1 792 1.57e-104 343
Msa1278870 AT2G45900.3 33.730 504 275 15 372 853 240 706 3.35e-65 233
Msa1278870 AT2G45900.1 33.730 504 275 15 372 853 240 706 3.35e-65 233
Msa1278870 AT2G45900.2 33.730 504 275 15 372 853 240 706 3.35e-65 233
Msa1278870 AT3G61380.1 29.356 637 377 18 240 853 115 701 4.09e-58 212
Msa1278870 AT3G61380.2 29.356 637 377 18 240 853 115 701 4.09e-58 212
Msa1278870 AT3G61380.3 29.356 637 377 18 240 853 115 701 4.09e-58 212
Msa1278870 AT1G01695.1 28.092 477 216 20 374 841 56 414 7.13e-28 118

Find 204 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACAACATGCTTCTGTTTC+TGG 0.092808 8_3:-15481831 None:intergenic
TTAGAGAATATCAAGATTTC+TGG 0.113137 8_3:+15479787 Msa1278870:five_prime_UTR
ATCATTGACAGAACATTTAT+TGG 0.130268 8_3:+15479666 Msa1278870:five_prime_UTR
TATCGCTGATGATTTAAATT+TGG 0.154482 8_3:+15481645 Msa1278870:CDS
AATTGGTGATTGTGGAAATT+TGG 0.193513 8_3:+15479566 Msa1278870:five_prime_UTR
GAAACTTGAGGGATTGAAAT+TGG 0.206916 8_3:+15479906 Msa1278870:five_prime_UTR
ATGAAGAAATGATCTTTATT+AGG 0.233540 8_3:-15482453 None:intergenic
TATTATTCTTCCTAGGGTTT+TGG 0.237996 8_3:-15482682 None:intergenic
CATTTCAATACAAGTGGATT+TGG 0.258773 8_3:-15482018 None:intergenic
CTTCCTTATCAACGTGAATT+AGG 0.259599 8_3:-15482851 None:intergenic
TGATCCTCCCAATCCCTTCT+AGG 0.262207 8_3:-15482741 None:intergenic
TACCTCTATTCTTAGCCTTT+TGG 0.271626 8_3:-15479999 None:intergenic
ATCGCTGATGATTTAAATTT+GGG 0.278717 8_3:+15481646 Msa1278870:CDS
TCCTCCAAAGGAAGCTAAAA+TGG 0.282043 8_3:+15479863 Msa1278870:five_prime_UTR
TTGTCAATCCAGAGGCTTGC+AGG 0.290683 8_3:-15484563 None:intergenic
CTTGATATTCTCTAAGAAAA+AGG 0.291579 8_3:-15479779 None:intergenic
AAATTAGAAACACCTTGTTT+TGG 0.309986 8_3:-15482576 None:intergenic
TGGCTTGAGCTTTACACAAT+TGG 0.310640 8_3:+15479883 Msa1278870:five_prime_UTR
GGCAATGTTCTTTCCAGTTT+CGG 0.314542 8_3:-15482271 None:intergenic
CGCCACTTAGTAGTCCTAGA+AGG 0.320688 8_3:+15482727 Msa1278870:CDS
AGAACATTTATTGGAACAAA+AGG 0.332923 8_3:+15479675 Msa1278870:five_prime_UTR
CGCATCTCTTGAATGAGTTT+CGG 0.339640 8_3:-15481854 None:intergenic
TGAATGATAAGACTAAAATA+AGG 0.340762 8_3:+15485148 Msa1278870:three_prime_UTR
TCGAATACTAAACAGTTTCA+TGG 0.342943 8_3:+15485125 Msa1278870:three_prime_UTR
GTTTGAGGCGTTGAGCGATA+TGG 0.347792 8_3:+15481115 Msa1278870:CDS
ACATGCTTCTGTTTCTGGTT+TGG 0.349180 8_3:-15481826 None:intergenic
GGATCAGAAAATTCCGAAAC+TGG 0.353658 8_3:+15482258 Msa1278870:CDS
TTAGCTTCCTTTGGAGGATA+AGG 0.354435 8_3:-15479858 None:intergenic
GCCAAGTCCAGTGTCTGTTC+TGG 0.356364 8_3:+15483628 Msa1278870:CDS
AGTGAGAGGGAGATGGTGAT+TGG 0.357655 8_3:-15483550 None:intergenic
GTTTAGTATTCGAAAGTTCC+TGG 0.369300 8_3:-15485115 None:intergenic
ACTTCACTTAGTAAGAGTTT+AGG 0.371063 8_3:+15485293 Msa1278870:three_prime_UTR
TGTGGAACTGCATAATTCAT+TGG 0.373586 8_3:+15479826 Msa1278870:five_prime_UTR
TCTGGATGCACCATTCTTAG+AGG 0.377217 8_3:+15483646 Msa1278870:CDS
GGCTTGAGCTTTACACAATT+GGG 0.384370 8_3:+15479884 Msa1278870:five_prime_UTR
TGTTTCAGTGGCTGAATTGT+GGG 0.386521 8_3:+15479468 Msa1278870:five_prime_UTR
AAGTAAATAGAAAGCTAGTT+TGG 0.388603 8_3:+15485187 Msa1278870:three_prime_UTR
TTTCTGAGATATCATGGCTT+TGG 0.388608 8_3:-15483092 None:intergenic
GACAATTCTATTTGAAATGT+TGG 0.391719 8_3:-15482214 None:intergenic
CTTCATTGATACATTCGTAT+AGG 0.394602 8_3:-15484692 None:intergenic
ACACGTTGGACAAAATTGTT+AGG 0.397114 8_3:+15484865 Msa1278870:CDS
GACTGGTACTAATAACGATT+TGG 0.397897 8_3:+15482521 Msa1278870:CDS
ATTCTAAAGCCGGGATCAAT+TGG 0.398074 8_3:+15482237 Msa1278870:CDS
CAGGTGGTGTTGTACATTCT+AGG 0.399639 8_3:+15481087 Msa1278870:intron
TGATCATGGCATAGCCGGTT+TGG 0.402002 8_3:-15484663 None:intergenic
TTAGAGGATGATGCCTGCTC+TGG 0.402006 8_3:+15483662 Msa1278870:CDS
AGACCCTTCCTTGTTTGATC+AGG 0.402706 8_3:+15484629 Msa1278870:CDS
TTGTCCAACGTGTGCGGCGG+GGG 0.402773 8_3:-15484855 None:intergenic
GTAACTATCTCATCTCTAAC+AGG 0.402980 8_3:-15482885 None:intergenic
CGTATAGGAGTTTCTGATCA+TGG 0.411399 8_3:-15484677 None:intergenic
GAAACGATATTATTCTTCCT+AGG 0.411591 8_3:-15482689 None:intergenic
CCCTCTCACTCTTCAATCAC+TGG 0.412260 8_3:+15483563 Msa1278870:CDS
TAGTTCAAAACCAACTGTTT+CGG 0.423616 8_3:-15484934 None:intergenic
CAGAACTTTCTGAGATATCA+TGG 0.425054 8_3:-15483098 None:intergenic
GATATTGAACGGAAAAGATC+TGG 0.426905 8_3:+15481900 Msa1278870:CDS
TTGTTTCAGTGGCTGAATTG+TGG 0.433995 8_3:+15479467 Msa1278870:five_prime_UTR
AAGAAATTAAAGCATGCTAT+AGG 0.437693 8_3:+15482378 Msa1278870:CDS
GGAGAGAATTATGCTTGAAT+TGG 0.438339 8_3:+15479549 Msa1278870:five_prime_UTR
GAATATGCACCATTTGTTTG+TGG 0.439403 8_3:+15479500 Msa1278870:five_prime_UTR
GAACATTTATTGGAACAAAA+GGG 0.441521 8_3:+15479676 Msa1278870:five_prime_UTR
AAAGCAGTCCTGCAAGCCTC+TGG 0.441992 8_3:+15484555 Msa1278870:CDS
TTCGCCATGGTCACTCTACT+AGG 0.444965 8_3:+15480781 Msa1278870:CDS
CAATCTTGCCTTTGACATGT+AGG 0.446050 8_3:+15480610 Msa1278870:five_prime_UTR
CTTTCTGTACTGAGGCCAAC+TGG 0.446074 8_3:-15483063 None:intergenic
AGTGGCGAAAAGTTGTAATC+AGG 0.448371 8_3:-15482711 None:intergenic
TGTTTCTAATTTATATATTG+AGG 0.454543 8_3:+15482587 Msa1278870:CDS
CGACCTAATTCACGTTGATA+AGG 0.458641 8_3:+15482848 Msa1278870:CDS
TACACAATTGGGAAACTTGA+GGG 0.460796 8_3:+15479895 Msa1278870:five_prime_UTR
TAGATTGCTTCCTTGAGTGC+TGG 0.463832 8_3:-15481699 None:intergenic
GAGTCATTTCCACAAACAAA+TGG 0.465455 8_3:-15479509 None:intergenic
ATGCTTACCAGGTTGACATC+TGG 0.465472 8_3:-15483690 None:intergenic
TATGCTTGAATTGGTGATTG+TGG 0.466969 8_3:+15479558 Msa1278870:five_prime_UTR
GGACTTACAAATGATACAAA+AGG 0.467486 8_3:-15484753 None:intergenic
AGACAACGATTCCAACTTCT+CGG 0.467949 8_3:+15482074 Msa1278870:CDS
TTCACCATGTTGAGTCCAAA+AGG 0.468411 8_3:+15479984 Msa1278870:five_prime_UTR
ATGATCTTGCTCCGAGAAGT+TGG 0.468663 8_3:-15482085 None:intergenic
TTTGGAGTTGGCTTTATGCT+AGG 0.471170 8_3:-15484774 None:intergenic
AGCGATTGTGGAGCGTGAAA+AGG 0.472851 8_3:+15482545 Msa1278870:CDS
TCAGCTTATAAGTTCAGATA+AGG 0.476083 8_3:+15481969 Msa1278870:CDS
GAGAGTACCACAGATGCATC+CGG 0.478405 8_3:+15483602 Msa1278870:CDS
AGAGTTTGAGAATTCTCATC+GGG 0.480241 8_3:+15482047 Msa1278870:CDS
TCCATGATGCATGGCGATGA+TGG 0.480318 8_3:+15481781 Msa1278870:CDS
TAGAATTGTCATTCTAAAGC+CGG 0.480624 8_3:+15482227 Msa1278870:CDS
ACTCAATTATTCAACAAAAG+TGG 0.481790 8_3:+15479528 Msa1278870:five_prime_UTR
TAGTAGTCCTAGAAGGGATT+GGG 0.483202 8_3:+15482734 Msa1278870:CDS
CTTTGCATCGCCAGCACTCA+AGG 0.484839 8_3:+15481689 Msa1278870:CDS
AAACGATATTATTCTTCCTA+GGG 0.484932 8_3:-15482688 None:intergenic
CCTTTAGTAACACCGGTTGA+AGG 0.488714 8_3:-15482492 None:intergenic
TAACGATTTGGAAGCGATTG+TGG 0.492510 8_3:+15482533 Msa1278870:CDS
GAATGATAAGACTAAAATAA+GGG 0.498354 8_3:+15485149 Msa1278870:three_prime_UTR
AAAATCAAACTTTATCAACT+TGG 0.498916 8_3:-15479198 None:intergenic
TTAGTAGTCCTAGAAGGGAT+TGG 0.503009 8_3:+15482733 Msa1278870:CDS
AAAATTGCAAGGCCTTCAAC+CGG 0.505000 8_3:+15482480 Msa1278870:CDS
TCCGACATTGTCTTTACCAA+TGG 0.505437 8_3:-15482421 None:intergenic
TCCTGGTATACTTGAGGAGG+TGG 0.507224 8_3:-15485098 None:intergenic
AAGATAAGGCGGGCTGTATG+TGG 0.508435 8_3:+15480736 Msa1278870:CDS
TTCCATCAGATCTGATAGAA+TGG 0.509034 8_3:-15484964 None:intergenic
TCCAGAACAGACACTGGACT+TGG 0.512169 8_3:-15483629 None:intergenic
TTAGCAATAGTTCTCACTGT+TGG 0.512383 8_3:-15481478 None:intergenic
GCCACTGAAACAAGAGCTCA+TGG 0.515730 8_3:-15479457 None:intergenic
CTGATGGAAGATACAATACT+TGG 0.516952 8_3:+15484978 Msa1278870:CDS
GCCAACTCCAAATATGAAAA+CGG 0.518097 8_3:+15484785 Msa1278870:CDS
TGCCATTCTATCAGATCTGA+TGG 0.518249 8_3:+15484962 Msa1278870:CDS
AACTTCTCGGAGCAAGATCA+TGG 0.518672 8_3:+15482087 Msa1278870:CDS
TCCATCATCGCCATGCATCA+TGG 0.518875 8_3:-15481782 None:intergenic
ACATTCTAGGAATAAGTTTG+AGG 0.519343 8_3:+15481100 Msa1278870:CDS
TGAACGCATTTCAATACAAG+TGG 0.519588 8_3:-15482024 None:intergenic
TATGAAAACGGTTATTCTCA+TGG 0.520104 8_3:+15484797 Msa1278870:CDS
CCTTCAACCGGTGTTACTAA+AGG 0.520420 8_3:+15482492 Msa1278870:CDS
GCGATTGTGGAGCGTGAAAA+GGG 0.522062 8_3:+15482546 Msa1278870:CDS
CGATTTGAAGCCGAAACAGT+TGG 0.522143 8_3:+15484924 Msa1278870:CDS
GCTTCAAGAGTAGATTCATC+AGG 0.522602 8_3:+15479940 Msa1278870:five_prime_UTR
GTCCAAAAGGCTAAGAATAG+AGG 0.527120 8_3:+15479997 Msa1278870:five_prime_UTR
CCCAGTGATTGAAGAGTGAG+AGG 0.528214 8_3:-15483564 None:intergenic
AGATAAGGCGGGCTGTATGT+GGG 0.530031 8_3:+15480737 Msa1278870:CDS
ACATCTGGAGTTCCCAGAGC+AGG 0.533362 8_3:-15483675 None:intergenic
AGAATTGTCATTCTAAAGCC+GGG 0.534862 8_3:+15482228 Msa1278870:CDS
TGAACATGTAGTGGTTGTAC+AGG 0.536167 8_3:-15484444 None:intergenic
AAATATTGTATCGAAGAAAA+CGG 0.537831 8_3:+15484513 Msa1278870:CDS
AGGTAGAGTTATCACCAAAC+CGG 0.541663 8_3:+15484649 Msa1278870:CDS
GCCACTTAGTAGTCCTAGAA+GGG 0.541873 8_3:+15482728 Msa1278870:CDS
AGACACTGGACTTGGCCGCC+CGG 0.543018 8_3:-15483621 None:intergenic
TGGCCGCCCGGATGCATCTG+TGG 0.544118 8_3:-15483609 None:intergenic
AATTAAAGCATGCTATAGGA+AGG 0.545234 8_3:+15482382 Msa1278870:CDS
TCTATGAGTTTCTTCACACT+AGG 0.549187 8_3:-15481505 None:intergenic
CAGGCATCATCCTCTAAGAA+TGG 0.549437 8_3:-15483656 None:intergenic
GTTTCTGATCATGGCATAGC+CGG 0.551909 8_3:-15484668 None:intergenic
ATTGAAGAGTGAGAGGGAGA+TGG 0.558545 8_3:-15483557 None:intergenic
CCTCTCACTCTTCAATCACT+GGG 0.558663 8_3:+15483564 Msa1278870:CDS
TAGAGGATGATGCCTGCTCT+GGG 0.559247 8_3:+15483663 Msa1278870:CDS
TGTGTAAGTAAGAGTTCAGA+AGG 0.559506 8_3:+15485002 Msa1278870:CDS
TCTACCTGATCAAACAAGGA+AGG 0.560059 8_3:-15484633 None:intergenic
TATTAGCTGCTGGTGTGTCA+TGG 0.560748 8_3:+15485350 Msa1278870:three_prime_UTR
AACATTTATTGGAACAAAAG+GGG 0.561769 8_3:+15479677 Msa1278870:five_prime_UTR
CGAAGCAGCAAGCACTCTGA+TGG 0.563703 8_3:+15480825 Msa1278870:CDS
CTTGTCTCCTTTAGTAACAC+CGG 0.564916 8_3:-15482499 None:intergenic
AGGCAAAATTCCAAAACCCT+AGG 0.565164 8_3:+15482672 Msa1278870:CDS
TCCATGAGCTCTTGTTTCAG+TGG 0.565349 8_3:+15479456 Msa1278870:five_prime_UTR
GAGAGACATGGAAAAGCCAT+TGG 0.566102 8_3:+15482405 Msa1278870:CDS
TTCAATCACTGGGAACACTA+AGG 0.568181 8_3:+15483574 Msa1278870:CDS
GAATCTTCCTCAGAACCAGT+TGG 0.571753 8_3:+15483048 Msa1278870:CDS
TGTATCAATGAAGTTCTCAC+AGG 0.572062 8_3:+15484702 Msa1278870:CDS
ATGTTGATTATATTAGCTGC+TGG 0.572685 8_3:+15485340 Msa1278870:three_prime_UTR
TGTAAGTAAGAGTTCAGAAG+GGG 0.576639 8_3:+15485004 Msa1278870:CDS
TTACACAATTGGGAAACTTG+AGG 0.580062 8_3:+15479894 Msa1278870:five_prime_UTR
TTTGATACCTTATCCTCCAA+AGG 0.580544 8_3:+15479851 Msa1278870:five_prime_UTR
CTGTTTCGGCTTCAAATCGA+AGG 0.580721 8_3:-15484920 None:intergenic
GTCGTCTGAGAGATTTGAGT+CGG 0.581267 8_3:-15482829 None:intergenic
GAAAGTTCCTGGTATACTTG+AGG 0.581661 8_3:-15485104 None:intergenic
TGAAGTGTGCTCAATCATCA+TGG 0.582605 8_3:+15480677 Msa1278870:exon
GGTCAGCACTTTCTGTACTG+AGG 0.584272 8_3:-15483071 None:intergenic
TACAATTCTCCTTCTGTGAG+AGG 0.584351 8_3:+15482324 Msa1278870:CDS
AGAGTACCACAGATGCATCC+GGG 0.586925 8_3:+15483603 Msa1278870:CDS
GGGAACTCCAGATGTCAACC+TGG 0.590832 8_3:+15483683 Msa1278870:CDS
ACATGATGGACTTGTCAAGT+AGG 0.591799 8_3:+15482652 Msa1278870:CDS
GTTATTCTCATGGTATCAGA+AGG 0.592327 8_3:+15484807 Msa1278870:CDS
GGGGTTTGTTGCGATTACTT+CGG 0.592471 8_3:+15484723 Msa1278870:CDS
GTGAATCAGATGATATTGAA+CGG 0.595207 8_3:+15481889 Msa1278870:CDS
CTCTACTAGGAAGTTGATTG+CGG 0.598163 8_3:+15480794 Msa1278870:CDS
ACTGAGGCCAACTGGTTCTG+AGG 0.602898 8_3:-15483055 None:intergenic
TCTTCGAATTGAACATGTAG+TGG 0.604676 8_3:-15484453 None:intergenic
CAAAATTGTTAGGAAAGACA+TGG 0.608101 8_3:+15484875 Msa1278870:CDS
TTGATCTCTTGTCAATCCAG+AGG 0.608442 8_3:-15484571 None:intergenic
ACCACCTCCTCAAGTATACC+AGG 0.608495 8_3:+15485097 Msa1278870:three_prime_UTR
ATTAAAGCATGCTATAGGAA+GGG 0.608555 8_3:+15482383 Msa1278870:CDS
CGGTATGAGAAAGATAAGGC+GGG 0.609169 8_3:+15480726 Msa1278870:CDS
CTACCTGATCAAACAAGGAA+GGG 0.610574 8_3:-15484632 None:intergenic
CTAGCATCTTGTCTGAGGAA+AGG 0.610891 8_3:-15484608 None:intergenic
AAGAGTTTGAGAATTCTCAT+CGG 0.611148 8_3:+15482046 Msa1278870:CDS
TAATGAAGATGAGAACATGA+TGG 0.611149 8_3:+15482638 Msa1278870:CDS
GATAAGGCGGGCTGTATGTG+GGG 0.612261 8_3:+15480738 Msa1278870:CDS
GTTACTAAAGGAGACAAGAC+TGG 0.612940 8_3:+15482504 Msa1278870:CDS
AGAGATGAGATAGTTACTGA+AGG 0.615501 8_3:+15482891 Msa1278870:CDS
GGTGCATCCAGAACAGACAC+TGG 0.617788 8_3:-15483635 None:intergenic
AGGGTCTAGCATCTTGTCTG+AGG 0.622611 8_3:-15484613 None:intergenic
TAAGAAACATCTGAGCGAGA+TGG 0.624718 8_3:+15482611 Msa1278870:CDS
TGGTATCAGAAGGAGTCTGT+TGG 0.627595 8_3:+15484817 Msa1278870:CDS
TGTGAACTACCTCTCACAGA+AGG 0.628814 8_3:-15482333 None:intergenic
AGAATATAGATAATTCTGAA+AGG 0.628958 8_3:+15481560 Msa1278870:CDS
GCCATTGGTAAAGACAATGT+CGG 0.629733 8_3:+15482420 Msa1278870:CDS
ATCATGAGAATCTAGAGATG+AGG 0.631616 8_3:-15482292 None:intergenic
TAACTCTACCTGATCAAACA+AGG 0.632508 8_3:-15484637 None:intergenic
GATATGGATGAAGTTTGTCA+TGG 0.633859 8_3:+15481131 Msa1278870:CDS
AGTTCCTGGTATACTTGAGG+AGG 0.635492 8_3:-15485101 None:intergenic
TCATGAATGTTTCAGGACGG+TGG 0.638035 8_3:+15481442 Msa1278870:intron
GTGTAAGTAAGAGTTCAGAA+GGG 0.639920 8_3:+15485003 Msa1278870:CDS
TGTGCGGTATGAGAAAGATA+AGG 0.641875 8_3:+15480722 Msa1278870:CDS
ATTGAACGGAAAAGATCTGG+AGG 0.643692 8_3:+15481903 Msa1278870:CDS
TAGTCCTAGAAGGGATTGGG+AGG 0.646359 8_3:+15482737 Msa1278870:CDS
TACAAATGATACAAAAGGCG+AGG 0.652576 8_3:-15484748 None:intergenic
GTATCAATGAAGTTCTCACA+GGG 0.652871 8_3:+15484703 Msa1278870:CDS
GGTGTTTGTTCCATGATGCA+TGG 0.653372 8_3:+15481772 Msa1278870:CDS
GCTATAGGAAGGGAGAGACA+TGG 0.657555 8_3:+15482393 Msa1278870:CDS
CCAGTGATTGAAGAGTGAGA+GGG 0.659479 8_3:-15483563 None:intergenic
TCCCTTCTAGGACTACTAAG+TGG 0.662099 8_3:-15482729 None:intergenic
AAACATCTGAGCGAGATGGT+AGG 0.662371 8_3:+15482615 Msa1278870:CDS
ACTTCCTAGTAGAGTGACCA+TGG 0.666781 8_3:-15480785 None:intergenic
GCGGTATGAGAAAGATAAGG+CGG 0.669758 8_3:+15480725 Msa1278870:CDS
GATGGAGAAGTAGAAAAGCA+TGG 0.671133 8_3:+15481799 Msa1278870:CDS
ATCTAAAGATAATCTTGACG+TGG 0.673939 8_3:+15481717 Msa1278870:CDS
GTAAGTAAGAGTTCAGAAGG+GGG 0.702089 8_3:+15485005 Msa1278870:CDS
AGTCTCAAAGACGTGCTGTG+CGG 0.729253 8_3:+15480706 Msa1278870:CDS
TATCAATGAAGTTCTCACAG+GGG 0.744165 8_3:+15484704 Msa1278870:CDS
GTACCACAGATGCATCCGGG+CGG 0.747479 8_3:+15483606 Msa1278870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATGATTCATTTT+TGG + chr8_3:15479340-15479359 Msa1278870:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+GGG + chr8_3:15480333-15480352 Msa1278870:intron 10.0%
!!! AAATTGAATAAATTTTTTGT+AGG + chr8_3:15483362-15483381 Msa1278870:intron 10.0%
!!! AATTGAATAAATTTTTTGTA+GGG + chr8_3:15483363-15483382 Msa1278870:intron 10.0%
!! AAAAATATAACATTCAATAA+AGG - chr8_3:15483438-15483457 None:intergenic 10.0%
!!! TATTGAATGTTATATTTTTA+TGG + chr8_3:15483439-15483458 Msa1278870:intron 10.0%
!!! GTAATTTGAAAGTTTTTTTT+AGG + chr8_3:15479600-15479619 Msa1278870:five_prime_UTR 15.0%
!!! TGTTTCTAATTTATATATTG+AGG + chr8_3:15482587-15482606 Msa1278870:CDS 15.0%
!!! ATAAATTGATGATTTATGTA+AGG + chr8_3:15483183-15483202 Msa1278870:intron 15.0%
!!! TAAATTGATGATTTATGTAA+GGG + chr8_3:15483184-15483203 Msa1278870:intron 15.0%
!!! ATTGAATAAATTTTTTGTAG+GGG + chr8_3:15483364-15483383 Msa1278870:intron 15.0%
!! AATAATAATACTTACTAGTA+TGG + chr8_3:15483926-15483945 Msa1278870:intron 15.0%
!! AATATTTAGTGTGTATATAT+TGG + chr8_3:15484017-15484036 Msa1278870:intron 15.0%
!!! TTTTTACTTAATTCTTATAG+TGG + chr8_3:15484256-15484275 Msa1278870:intron 15.0%
!! AAAATCAAACTTTATCAACT+TGG - chr8_3:15479201-15479220 None:intergenic 20.0%
!!! AAGTTTGATTTTTTTTCATC+TGG + chr8_3:15479209-15479228 Msa1278870:five_prime_UTR 20.0%
!!! AGTTTGATTTTTTTTCATCT+GGG + chr8_3:15479210-15479229 Msa1278870:five_prime_UTR 20.0%
!!! TGATTCATTTTTGGTTTTTA+TGG + chr8_3:15479349-15479368 Msa1278870:intron 20.0%
!!! AGTTTTGAATTACAACATTT+TGG + chr8_3:15479408-15479427 Msa1278870:intron 20.0%
!!! TTTTTGTTATCTATCTTAGT+TGG + chr8_3:15479756-15479775 Msa1278870:five_prime_UTR 20.0%
!! ATCATACAAAAATGAGATAT+AGG - chr8_3:15480169-15480188 None:intergenic 20.0%
!! ATAACACCATAAATAACAAA+GGG - chr8_3:15480482-15480501 None:intergenic 20.0%
!! TATAACACCATAAATAACAA+AGG - chr8_3:15480483-15480502 None:intergenic 20.0%
!!! GTTATTTATGGTGTTATAAA+TGG + chr8_3:15480485-15480504 Msa1278870:intron 20.0%
!!! TAATAGTTCTAAGGTTTTTT+CGG - chr8_3:15480636-15480655 None:intergenic 20.0%
!! AGAATATAGATAATTCTGAA+AGG + chr8_3:15481560-15481579 Msa1278870:CDS 20.0%
!! ATGAAGAAATGATCTTTATT+AGG - chr8_3:15482456-15482475 None:intergenic 20.0%
!!! TATTTTTATGGTCTTTTCTT+TGG + chr8_3:15483451-15483470 Msa1278870:intron 20.0%
!! AAAGTAATATGGAATACATA+TGG - chr8_3:15484383-15484402 None:intergenic 20.0%
!!! ATTCCATATTACTTTTAATC+TGG + chr8_3:15484388-15484407 Msa1278870:intron 20.0%
!! AAATATTGTATCGAAGAAAA+CGG + chr8_3:15484513-15484532 Msa1278870:CDS 20.0%
!! TGAATGATAAGACTAAAATA+AGG + chr8_3:15485148-15485167 Msa1278870:three_prime_UTR 20.0%
!! GAATGATAAGACTAAAATAA+GGG + chr8_3:15485149-15485168 Msa1278870:three_prime_UTR 20.0%
! CAGCAAAAAAGTGAAAAATA+TGG - chr8_3:15479167-15479186 None:intergenic 25.0%
!! TTCTGAAAATTGAGATTTAG+AGG + chr8_3:15479302-15479321 Msa1278870:intron 25.0%
! TCTGAAAATTGAGATTTAGA+GGG + chr8_3:15479303-15479322 Msa1278870:intron 25.0%
!!! ACATTTTGGTAAGAATTGAT+TGG + chr8_3:15479422-15479441 Msa1278870:intron 25.0%
! ACTCAATTATTCAACAAAAG+TGG + chr8_3:15479528-15479547 Msa1278870:five_prime_UTR 25.0%
! ATCATTGACAGAACATTTAT+TGG + chr8_3:15479666-15479685 Msa1278870:five_prime_UTR 25.0%
! AGAACATTTATTGGAACAAA+AGG + chr8_3:15479675-15479694 Msa1278870:five_prime_UTR 25.0%
! GAACATTTATTGGAACAAAA+GGG + chr8_3:15479676-15479695 Msa1278870:five_prime_UTR 25.0%
! AACATTTATTGGAACAAAAG+GGG + chr8_3:15479677-15479696 Msa1278870:five_prime_UTR 25.0%
!! CTTGATATTCTCTAAGAAAA+AGG - chr8_3:15479782-15479801 None:intergenic 25.0%
! TTAGAGAATATCAAGATTTC+TGG + chr8_3:15479787-15479806 Msa1278870:five_prime_UTR 25.0%
! TAAACAAGAATTGAACAGTT+TGG - chr8_3:15480126-15480145 None:intergenic 25.0%
!!! TTTTTTTTTTTTGAGGGGAA+TGG + chr8_3:15480338-15480357 Msa1278870:intron 25.0%
! AATCAATTCATGTAGATCTA+TGG - chr8_3:15480388-15480407 None:intergenic 25.0%
!!! ATTTGTCCCTTTGTTATTTA+TGG + chr8_3:15480473-15480492 Msa1278870:intron 25.0%
!!! ATAAATGGACTATGGTTTTT+TGG + chr8_3:15480500-15480519 Msa1278870:intron 25.0%
!! AATGTGTTTGTTAATCTATC+AGG + chr8_3:15480583-15480602 Msa1278870:intron 25.0%
!!! CTCTTTTTCTAATAGTTCTA+AGG - chr8_3:15480645-15480664 None:intergenic 25.0%
! CTTAGAACTATTAGAAAAAG+AGG + chr8_3:15480643-15480662 Msa1278870:five_prime_UTR 25.0%
! TTTGAATTCTTTCTTCTTAC+AGG + chr8_3:15481068-15481087 Msa1278870:intron 25.0%
! TGATGAGTTGCATTAAAATA+TGG - chr8_3:15481178-15481197 None:intergenic 25.0%
! CAAACTAAAAAAATACTGAG+TGG + chr8_3:15481202-15481221 Msa1278870:intron 25.0%
! TACAAAATGTTGTCATATAG+AGG - chr8_3:15481296-15481315 None:intergenic 25.0%
! TTGTACTAAATAGTGTATCA+TGG + chr8_3:15481311-15481330 Msa1278870:intron 25.0%
!!! GGAAGATTTCTTTTTTCTTT+TGG - chr8_3:15481611-15481630 None:intergenic 25.0%
! TATCGCTGATGATTTAAATT+TGG + chr8_3:15481645-15481664 Msa1278870:CDS 25.0%
! ATCGCTGATGATTTAAATTT+GGG + chr8_3:15481646-15481665 Msa1278870:CDS 25.0%
!! TCTTTTCTCTGATGAAATAA+TGG + chr8_3:15481939-15481958 Msa1278870:CDS 25.0%
! TGAAAAAGTTATGCTTCTTA+TGG - chr8_3:15482143-15482162 None:intergenic 25.0%
!!! ATAAGAAGCATAACTTTTTC+AGG + chr8_3:15482142-15482161 Msa1278870:CDS 25.0%
!! GACAATTCTATTTGAAATGT+TGG - chr8_3:15482217-15482236 None:intergenic 25.0%
! AAGAAATTAAAGCATGCTAT+AGG + chr8_3:15482378-15482397 Msa1278870:CDS 25.0%
! TCTTCATTGAAAAAATTGCA+AGG + chr8_3:15482469-15482488 Msa1278870:CDS 25.0%
!!! AAATTAGAAACACCTTGTTT+TGG - chr8_3:15482579-15482598 None:intergenic 25.0%
! AAACGATATTATTCTTCCTA+GGG - chr8_3:15482691-15482710 None:intergenic 25.0%
! TGGGAAATCATAATATTGTA+GGG - chr8_3:15483227-15483246 None:intergenic 25.0%
! TTGGGAAATCATAATATTGT+AGG - chr8_3:15483228-15483247 None:intergenic 25.0%
! AAATGGTCAAAGTTAATGTA+GGG - chr8_3:15483258-15483277 None:intergenic 25.0%
! AAAATGGTCAAAGTTAATGT+AGG - chr8_3:15483259-15483278 None:intergenic 25.0%
! TTAAACTGTTTATCCAAACA+GGG - chr8_3:15483729-15483748 None:intergenic 25.0%
! ATTAAACTGTTTATCCAAAC+AGG - chr8_3:15483730-15483749 None:intergenic 25.0%
!!! GTCTTTTAGCTTTTTTTCAT+TGG + chr8_3:15483856-15483875 Msa1278870:intron 25.0%
! ATACTTACTAGTATGGTTAT+TGG + chr8_3:15483933-15483952 Msa1278870:intron 25.0%
!! TATTAGCTTACATGTTTGTT+AGG + chr8_3:15484225-15484244 Msa1278870:intron 25.0%
! ATGCCAGATTAAAAGTAATA+TGG - chr8_3:15484394-15484413 None:intergenic 25.0%
!! AGAATAACCGTTTTCATATT+TGG - chr8_3:15484795-15484814 None:intergenic 25.0%
! AAGTAAATAGAAAGCTAGTT+TGG + chr8_3:15485187-15485206 Msa1278870:three_prime_UTR 25.0%
!! TAATTGTGAACTCAGATTTT+TGG + chr8_3:15485455-15485474 Msa1278870:three_prime_UTR 25.0%
!!! TTGATTTTTTTTCATCTGGG+TGG + chr8_3:15479213-15479232 Msa1278870:five_prime_UTR 30.0%
! AATTGGTGATTGTGGAAATT+TGG + chr8_3:15479566-15479585 Msa1278870:five_prime_UTR 30.0%
TCACTAAATGACATGAATAG+TGG + chr8_3:15480071-15480090 Msa1278870:intron 30.0%
TTGAACAGTTTGGTTGATTA+TGG - chr8_3:15480116-15480135 None:intergenic 30.0%
! GAATGGTTATGTTTGTTACA+AGG + chr8_3:15480355-15480374 Msa1278870:intron 30.0%
!! ATGGTGTTATAAATGGACTA+TGG + chr8_3:15480492-15480511 Msa1278870:intron 30.0%
!!! GTTTTTTGGAAACATTAGAG+AGG + chr8_3:15480514-15480533 Msa1278870:intron 30.0%
GAATTGTGCTTAACTAACAT+TGG + chr8_3:15480851-15480870 Msa1278870:intron 30.0%
! TTTACAACCTATGCTCATTT+TGG + chr8_3:15480889-15480908 Msa1278870:intron 30.0%
CTCATAAAAATATGCTTTCC+CGG + chr8_3:15481020-15481039 Msa1278870:intron 30.0%
! ACATTCTAGGAATAAGTTTG+AGG + chr8_3:15481100-15481119 Msa1278870:CDS 30.0%
ATGGATAGAAAGACTTACAA+AGG - chr8_3:15481159-15481178 None:intergenic 30.0%
TATTTAACAGCACTAACACT+AGG + chr8_3:15481378-15481397 Msa1278870:intron 30.0%
CACTATATCATGAATGTTTC+AGG + chr8_3:15481435-15481454 Msa1278870:intron 30.0%
ATATCATGAATGTTTCAGGA+CGG + chr8_3:15481439-15481458 Msa1278870:intron 30.0%
ATCTAAAGATAATCTTGACG+TGG + chr8_3:15481717-15481736 Msa1278870:CDS 30.0%
!! GAAGAGTTTTGTAATCTAAG+AGG + chr8_3:15481751-15481770 Msa1278870:CDS 30.0%
GTGAATCAGATGATATTGAA+CGG + chr8_3:15481889-15481908 Msa1278870:CDS 30.0%
TCAGCTTATAAGTTCAGATA+AGG + chr8_3:15481969-15481988 Msa1278870:CDS 30.0%
! CATTTCAATACAAGTGGATT+TGG - chr8_3:15482021-15482040 None:intergenic 30.0%
AAGAGTTTGAGAATTCTCAT+CGG + chr8_3:15482046-15482065 Msa1278870:CDS 30.0%
!!! GCATAACTTTTTCAGGAAAA+AGG + chr8_3:15482149-15482168 Msa1278870:CDS 30.0%
!! TAGAATTGTCATTCTAAAGC+CGG + chr8_3:15482227-15482246 Msa1278870:CDS 30.0%
AATTAAAGCATGCTATAGGA+AGG + chr8_3:15482382-15482401 Msa1278870:CDS 30.0%
ATTAAAGCATGCTATAGGAA+GGG + chr8_3:15482383-15482402 Msa1278870:CDS 30.0%
!!! AAGGGTATTTTTCCAAAACA+AGG + chr8_3:15482564-15482583 Msa1278870:CDS 30.0%
TAATGAAGATGAGAACATGA+TGG + chr8_3:15482638-15482657 Msa1278870:CDS 30.0%
! TATTATTCTTCCTAGGGTTT+TGG - chr8_3:15482685-15482704 None:intergenic 30.0%
GAAACGATATTATTCTTCCT+AGG - chr8_3:15482692-15482711 None:intergenic 30.0%
! TGCAGAATTTTCTCAATGTT+TGG + chr8_3:15483125-15483144 Msa1278870:CDS 30.0%
TTAATGTAGGGACTAAACTT+GGG - chr8_3:15483246-15483265 None:intergenic 30.0%
AAGCAAAGCAAGGAATAAAA+TGG - chr8_3:15483275-15483294 None:intergenic 30.0%
ATTCCTTGCTTTGCTTTAAT+AGG + chr8_3:15483279-15483298 Msa1278870:intron 30.0%
! TTTTATGGTCTTTTCTTTGG+TGG + chr8_3:15483454-15483473 Msa1278870:intron 30.0%
ACTTGTCATATAAGTGCTAA+TGG + chr8_3:15483770-15483789 Msa1278870:intron 30.0%
CATTGGAAATAAGCAAAAGT+TGG + chr8_3:15483873-15483892 Msa1278870:intron 30.0%
AAAAGTTGGAGTTGTTTACT+AGG + chr8_3:15483887-15483906 Msa1278870:intron 30.0%
AAAGTTGGAGTTGTTTACTA+GGG + chr8_3:15483888-15483907 Msa1278870:intron 30.0%
TTGTTTACTAGGGATTTATC+AGG + chr8_3:15483898-15483917 Msa1278870:intron 30.0%
CAAAACTGAACTCAATCTAT+AGG + chr8_3:15483994-15484013 Msa1278870:intron 30.0%
CGAGATTCATTATAATGAGT+CGG - chr8_3:15484063-15484082 None:intergenic 30.0%
AATGAATCACTACCTAAACA+TGG + chr8_3:15484111-15484130 Msa1278870:intron 30.0%
TGATAAGTAGACACATAAAG+AGG - chr8_3:15484146-15484165 None:intergenic 30.0%
ATAAGATGCAATTTGCCATT+TGG + chr8_3:15484297-15484316 Msa1278870:intron 30.0%
! CAATTTGCCATTTGGAAAAT+AGG + chr8_3:15484305-15484324 Msa1278870:intron 30.0%
CTTCATTGATACATTCGTAT+AGG - chr8_3:15484695-15484714 None:intergenic 30.0%
GGACTTACAAATGATACAAA+AGG - chr8_3:15484756-15484775 None:intergenic 30.0%
TATGAAAACGGTTATTCTCA+TGG + chr8_3:15484797-15484816 Msa1278870:CDS 30.0%
CAAAATTGTTAGGAAAGACA+TGG + chr8_3:15484875-15484894 Msa1278870:CDS 30.0%
TAGTTCAAAACCAACTGTTT+CGG - chr8_3:15484937-15484956 None:intergenic 30.0%
TCGAATACTAAACAGTTTCA+TGG + chr8_3:15485125-15485144 Msa1278870:three_prime_UTR 30.0%
ACTTCACTTAGTAAGAGTTT+AGG + chr8_3:15485293-15485312 Msa1278870:three_prime_UTR 30.0%
! ATGTTGATTATATTAGCTGC+TGG + chr8_3:15485340-15485359 Msa1278870:three_prime_UTR 30.0%
!!! CAGATTTTTGGAGTTTCAAA+AGG + chr8_3:15485467-15485486 Msa1278870:three_prime_UTR 30.0%
GAATATGCACCATTTGTTTG+TGG + chr8_3:15479500-15479519 Msa1278870:five_prime_UTR 35.0%
GAGTCATTTCCACAAACAAA+TGG - chr8_3:15479512-15479531 None:intergenic 35.0%
GGAGAGAATTATGCTTGAAT+TGG + chr8_3:15479549-15479568 Msa1278870:five_prime_UTR 35.0%
! TATGCTTGAATTGGTGATTG+TGG + chr8_3:15479558-15479577 Msa1278870:five_prime_UTR 35.0%
!! GGAATTTTCAGCTTTTTCTG+TGG + chr8_3:15479808-15479827 Msa1278870:five_prime_UTR 35.0%
TGTGGAACTGCATAATTCAT+TGG + chr8_3:15479826-15479845 Msa1278870:five_prime_UTR 35.0%
TTTGATACCTTATCCTCCAA+AGG + chr8_3:15479851-15479870 Msa1278870:five_prime_UTR 35.0%
TTACACAATTGGGAAACTTG+AGG + chr8_3:15479894-15479913 Msa1278870:five_prime_UTR 35.0%
TACACAATTGGGAAACTTGA+GGG + chr8_3:15479895-15479914 Msa1278870:five_prime_UTR 35.0%
GAAACTTGAGGGATTGAAAT+TGG + chr8_3:15479906-15479925 Msa1278870:five_prime_UTR 35.0%
!! TACCTCTATTCTTAGCCTTT+TGG - chr8_3:15480002-15480021 None:intergenic 35.0%
CACAGAAGAAAAAAACAGAG+AGG - chr8_3:15480039-15480058 None:intergenic 35.0%
TCATCAAAATCACAACTCCT+TGG - chr8_3:15480215-15480234 None:intergenic 35.0%
ATAGCTTATTACAAGCAGAC+AGG - chr8_3:15480262-15480281 None:intergenic 35.0%
CATTAGAGAGGAGTAATGAT+AGG + chr8_3:15480526-15480545 Msa1278870:intron 35.0%
GAATTCTTTCTTCTTACAGG+TGG + chr8_3:15481071-15481090 Msa1278870:intron 35.0%
GATATGGATGAAGTTTGTCA+TGG + chr8_3:15481131-15481150 Msa1278870:CDS 35.0%
! TGTTAGTGCTGTTAAATAGC+AGG - chr8_3:15481376-15481395 None:intergenic 35.0%
TTAGCAATAGTTCTCACTGT+TGG - chr8_3:15481481-15481500 None:intergenic 35.0%
TCTATGAGTTTCTTCACACT+AGG - chr8_3:15481508-15481527 None:intergenic 35.0%
! AGCGATATCATGTTTTCTCT+CGG - chr8_3:15481632-15481651 None:intergenic 35.0%
AAACAACATGCTTCTGTTTC+TGG - chr8_3:15481834-15481853 None:intergenic 35.0%
GATATTGAACGGAAAAGATC+TGG + chr8_3:15481900-15481919 Msa1278870:CDS 35.0%
TGAACGCATTTCAATACAAG+TGG - chr8_3:15482027-15482046 None:intergenic 35.0%
AGAGTTTGAGAATTCTCATC+GGG + chr8_3:15482047-15482066 Msa1278870:CDS 35.0%
!! AGAATTGTCATTCTAAAGCC+GGG + chr8_3:15482228-15482247 Msa1278870:CDS 35.0%
! TTTTCTGATCCAATTGATCC+CGG - chr8_3:15482249-15482268 None:intergenic 35.0%
ATCATGAGAATCTAGAGATG+AGG - chr8_3:15482295-15482314 None:intergenic 35.0%
GACTGGTACTAATAACGATT+TGG + chr8_3:15482521-15482540 Msa1278870:CDS 35.0%
!!! ATCACGAAGTCTTGTTTTTG+CGG - chr8_3:15482775-15482794 None:intergenic 35.0%
CTTCCTTATCAACGTGAATT+AGG - chr8_3:15482854-15482873 None:intergenic 35.0%
GTAACTATCTCATCTCTAAC+AGG - chr8_3:15482888-15482907 None:intergenic 35.0%
AGAGATGAGATAGTTACTGA+AGG + chr8_3:15482891-15482910 Msa1278870:CDS 35.0%
! CTTTTCTTAATTTCCGTGCA+GGG + chr8_3:15482992-15483011 Msa1278870:intron 35.0%
! TTTTCTTAATTTCCGTGCAG+GGG + chr8_3:15482993-15483012 Msa1278870:intron 35.0%
!! TTTCTGAGATATCATGGCTT+TGG - chr8_3:15483095-15483114 None:intergenic 35.0%
!! CAGAACTTTCTGAGATATCA+TGG - chr8_3:15483101-15483120 None:intergenic 35.0%
!! ATTTTCTCAATGTTTGGAGC+AGG + chr8_3:15483131-15483150 Msa1278870:CDS 35.0%
GTTAATGTAGGGACTAAACT+TGG - chr8_3:15483247-15483266 None:intergenic 35.0%
GTTCCTATTAAAGCAAAGCA+AGG - chr8_3:15483285-15483304 None:intergenic 35.0%
ACTACCTAAACATGGTATAG+TGG + chr8_3:15484119-15484138 Msa1278870:intron 35.0%
! CGGAAAACCTATTTTCCAAA+TGG - chr8_3:15484315-15484334 None:intergenic 35.0%
TCAGCATAGTTATCAATTCG+AGG - chr8_3:15484352-15484371 None:intergenic 35.0%
TCTTCGAATTGAACATGTAG+TGG - chr8_3:15484456-15484475 None:intergenic 35.0%
TAACTCTACCTGATCAAACA+AGG - chr8_3:15484640-15484659 None:intergenic 35.0%
TGTATCAATGAAGTTCTCAC+AGG + chr8_3:15484702-15484721 Msa1278870:CDS 35.0%
GTATCAATGAAGTTCTCACA+GGG + chr8_3:15484703-15484722 Msa1278870:CDS 35.0%
TATCAATGAAGTTCTCACAG+GGG + chr8_3:15484704-15484723 Msa1278870:CDS 35.0%
TACAAATGATACAAAAGGCG+AGG - chr8_3:15484751-15484770 None:intergenic 35.0%
GCCAACTCCAAATATGAAAA+CGG + chr8_3:15484785-15484804 Msa1278870:CDS 35.0%
!! ACCGTTTTCATATTTGGAGT+TGG - chr8_3:15484789-15484808 None:intergenic 35.0%
GTTATTCTCATGGTATCAGA+AGG + chr8_3:15484807-15484826 Msa1278870:CDS 35.0%
ACACGTTGGACAAAATTGTT+AGG + chr8_3:15484865-15484884 Msa1278870:CDS 35.0%
AGGAAAGACATGGAAAAATG+TGG + chr8_3:15484885-15484904 Msa1278870:CDS 35.0%
GGAAAGACATGGAAAAATGT+GGG + chr8_3:15484886-15484905 Msa1278870:CDS 35.0%
!!! GAAACAGTTGGTTTTGAACT+AGG + chr8_3:15484936-15484955 Msa1278870:CDS 35.0%
TTCCATCAGATCTGATAGAA+TGG - chr8_3:15484967-15484986 None:intergenic 35.0%
CTGATGGAAGATACAATACT+TGG + chr8_3:15484978-15484997 Msa1278870:CDS 35.0%
TGTGTAAGTAAGAGTTCAGA+AGG + chr8_3:15485002-15485021 Msa1278870:CDS 35.0%
GTGTAAGTAAGAGTTCAGAA+GGG + chr8_3:15485003-15485022 Msa1278870:CDS 35.0%
TGTAAGTAAGAGTTCAGAAG+GGG + chr8_3:15485004-15485023 Msa1278870:CDS 35.0%
!!! GTCGATTTTTTCTTACGCAT+CGG - chr8_3:15485063-15485082 None:intergenic 35.0%
GTTTAGTATTCGAAAGTTCC+TGG - chr8_3:15485118-15485137 None:intergenic 35.0%
TTGTTTCAGTGGCTGAATTG+TGG + chr8_3:15479467-15479486 Msa1278870:five_prime_UTR 40.0%
TGTTTCAGTGGCTGAATTGT+GGG + chr8_3:15479468-15479487 Msa1278870:five_prime_UTR 40.0%
! TTAGCTTCCTTTGGAGGATA+AGG - chr8_3:15479861-15479880 None:intergenic 40.0%
TCCTCCAAAGGAAGCTAAAA+TGG + chr8_3:15479863-15479882 Msa1278870:five_prime_UTR 40.0%
!!! CAAGCCATTTTAGCTTCCTT+TGG - chr8_3:15479870-15479889 None:intergenic 40.0%
TGGCTTGAGCTTTACACAAT+TGG + chr8_3:15479883-15479902 Msa1278870:five_prime_UTR 40.0%
GGCTTGAGCTTTACACAATT+GGG + chr8_3:15479884-15479903 Msa1278870:five_prime_UTR 40.0%
GCTTCAAGAGTAGATTCATC+AGG + chr8_3:15479940-15479959 Msa1278870:five_prime_UTR 40.0%
TTCACCATGTTGAGTCCAAA+AGG + chr8_3:15479984-15480003 Msa1278870:five_prime_UTR 40.0%
!! TTAGCCTTTTGGACTCAACA+TGG - chr8_3:15479991-15480010 None:intergenic 40.0%
GTCCAAAAGGCTAAGAATAG+AGG + chr8_3:15479997-15480016 Msa1278870:five_prime_UTR 40.0%
! TTTTTGTCTCTTGTGCTCCA+AGG + chr8_3:15480195-15480214 Msa1278870:intron 40.0%
CAATCTTGCCTTTGACATGT+AGG + chr8_3:15480610-15480629 Msa1278870:five_prime_UTR 40.0%
!! TTTTTCGGCCTACATGTCAA+AGG - chr8_3:15480621-15480640 None:intergenic 40.0%
TGAAGTGTGCTCAATCATCA+TGG + chr8_3:15480677-15480696 Msa1278870:exon 40.0%
TGTGCGGTATGAGAAAGATA+AGG + chr8_3:15480722-15480741 Msa1278870:CDS 40.0%
! CTCTACTAGGAAGTTGATTG+CGG + chr8_3:15480794-15480813 Msa1278870:CDS 40.0%
AGAGAGACCAAAATGAGCAT+AGG - chr8_3:15480899-15480918 None:intergenic 40.0%
TTGTCATATAGAGGCTACAG+TGG - chr8_3:15481287-15481306 None:intergenic 40.0%
TAGCAGGCTAAAGCATATAG+CGG - chr8_3:15481360-15481379 None:intergenic 40.0%
GATGGAGAAGTAGAAAAGCA+TGG + chr8_3:15481799-15481818 Msa1278870:CDS 40.0%
!! ACATGCTTCTGTTTCTGGTT+TGG - chr8_3:15481829-15481848 None:intergenic 40.0%
CGCATCTCTTGAATGAGTTT+CGG - chr8_3:15481857-15481876 None:intergenic 40.0%
ATTGAACGGAAAAGATCTGG+AGG + chr8_3:15481903-15481922 Msa1278870:CDS 40.0%
AGACAACGATTCCAACTTCT+CGG + chr8_3:15482074-15482093 Msa1278870:CDS 40.0%
!! ATTCTAAAGCCGGGATCAAT+TGG + chr8_3:15482237-15482256 Msa1278870:CDS 40.0%
GGATCAGAAAATTCCGAAAC+TGG + chr8_3:15482258-15482277 Msa1278870:CDS 40.0%
GGCAATGTTCTTTCCAGTTT+CGG - chr8_3:15482274-15482293 None:intergenic 40.0%
TACAATTCTCCTTCTGTGAG+AGG + chr8_3:15482324-15482343 Msa1278870:CDS 40.0%
GCCATTGGTAAAGACAATGT+CGG + chr8_3:15482420-15482439 Msa1278870:CDS 40.0%
TCCGACATTGTCTTTACCAA+TGG - chr8_3:15482424-15482443 None:intergenic 40.0%
AAAATTGCAAGGCCTTCAAC+CGG + chr8_3:15482480-15482499 Msa1278870:CDS 40.0%
CTTGTCTCCTTTAGTAACAC+CGG - chr8_3:15482502-15482521 None:intergenic 40.0%
GTTACTAAAGGAGACAAGAC+TGG + chr8_3:15482504-15482523 Msa1278870:CDS 40.0%
! TAACGATTTGGAAGCGATTG+TGG + chr8_3:15482533-15482552 Msa1278870:CDS 40.0%
TAAGAAACATCTGAGCGAGA+TGG + chr8_3:15482611-15482630 Msa1278870:CDS 40.0%
!! ACATGATGGACTTGTCAAGT+AGG + chr8_3:15482652-15482671 Msa1278870:CDS 40.0%
AGGCAAAATTCCAAAACCCT+AGG + chr8_3:15482672-15482691 Msa1278870:CDS 40.0%
AGTGGCGAAAAGTTGTAATC+AGG - chr8_3:15482714-15482733 None:intergenic 40.0%
TTAGTAGTCCTAGAAGGGAT+TGG + chr8_3:15482733-15482752 Msa1278870:CDS 40.0%
TAGTAGTCCTAGAAGGGATT+GGG + chr8_3:15482734-15482753 Msa1278870:CDS 40.0%
CGACCTAATTCACGTTGATA+AGG + chr8_3:15482848-15482867 Msa1278870:CDS 40.0%
CCTGCACGGAAATTAAGAAA+AGG - chr8_3:15482994-15483013 None:intergenic 40.0%
! CCTTTTCTTAATTTCCGTGC+AGG + chr8_3:15482991-15483010 Msa1278870:intron 40.0%
! CTGTCATTTGTTCTTTCTGC+AGG + chr8_3:15483511-15483530 Msa1278870:intron 40.0%
TTCAATCACTGGGAACACTA+AGG + chr8_3:15483574-15483593 Msa1278870:CDS 40.0%
TATCTTGCAATACATGCGAG+TGG + chr8_3:15483956-15483975 Msa1278870:intron 40.0%
AGGTCCACTATACCATGTTT+AGG - chr8_3:15484126-15484145 None:intergenic 40.0%
TCGAGGTTCAAATTGTGAGT+CGG - chr8_3:15484335-15484354 None:intergenic 40.0%
TGAACATGTAGTGGTTGTAC+AGG - chr8_3:15484447-15484466 None:intergenic 40.0%
TTGATCTCTTGTCAATCCAG+AGG - chr8_3:15484574-15484593 None:intergenic 40.0%
CTACCTGATCAAACAAGGAA+GGG - chr8_3:15484635-15484654 None:intergenic 40.0%
TCTACCTGATCAAACAAGGA+AGG - chr8_3:15484636-15484655 None:intergenic 40.0%
AGGTAGAGTTATCACCAAAC+CGG + chr8_3:15484649-15484668 Msa1278870:CDS 40.0%
CGTATAGGAGTTTCTGATCA+TGG - chr8_3:15484680-15484699 None:intergenic 40.0%
!! TTTGGAGTTGGCTTTATGCT+AGG - chr8_3:15484777-15484796 None:intergenic 40.0%
! ACAATTTTGTCCAACGTGTG+CGG - chr8_3:15484864-15484883 None:intergenic 40.0%
ACATGGAAAAATGTGGGTCA+TGG + chr8_3:15484892-15484911 Msa1278870:CDS 40.0%
TGCCATTCTATCAGATCTGA+TGG + chr8_3:15484962-15484981 Msa1278870:CDS 40.0%
GTAAGTAAGAGTTCAGAAGG+GGG + chr8_3:15485005-15485024 Msa1278870:CDS 40.0%
GAAAGTTCCTGGTATACTTG+AGG - chr8_3:15485107-15485126 None:intergenic 40.0%
! TCCATGAGCTCTTGTTTCAG+TGG + chr8_3:15479456-15479475 Msa1278870:five_prime_UTR 45.0%
!!! GCCATTTTAGCTTCCTTTGG+AGG - chr8_3:15479867-15479886 None:intergenic 45.0%
GCGGTATGAGAAAGATAAGG+CGG + chr8_3:15480725-15480744 Msa1278870:CDS 45.0%
CGGTATGAGAAAGATAAGGC+GGG + chr8_3:15480726-15480745 Msa1278870:CDS 45.0%
! AGCATGCTTGATTTTCGCCA+TGG + chr8_3:15480768-15480787 Msa1278870:CDS 45.0%
ACTTCCTAGTAGAGTGACCA+TGG - chr8_3:15480788-15480807 None:intergenic 45.0%
TATGCTTTCCCGGTCTCTAA+TGG + chr8_3:15481030-15481049 Msa1278870:intron 45.0%
AGACACAACCATTAGAGACC+GGG - chr8_3:15481041-15481060 None:intergenic 45.0%
CAGACACAACCATTAGAGAC+CGG - chr8_3:15481042-15481061 None:intergenic 45.0%
!! CAGGTGGTGTTGTACATTCT+AGG + chr8_3:15481087-15481106 Msa1278870:intron 45.0%
!! ATACTGAGTGGTGTCATTCG+CGG + chr8_3:15481214-15481233 Msa1278870:intron 45.0%
!! AGTGGTGCTATATCACGTAG+CGG - chr8_3:15481269-15481288 None:intergenic 45.0%
TCATGAATGTTTCAGGACGG+TGG + chr8_3:15481442-15481461 Msa1278870:intron 45.0%
TAGATTGCTTCCTTGAGTGC+TGG - chr8_3:15481702-15481721 None:intergenic 45.0%
GGTGTTTGTTCCATGATGCA+TGG + chr8_3:15481772-15481791 Msa1278870:CDS 45.0%
ATGATCTTGCTCCGAGAAGT+TGG - chr8_3:15482088-15482107 None:intergenic 45.0%
AACTTCTCGGAGCAAGATCA+TGG + chr8_3:15482087-15482106 Msa1278870:CDS 45.0%
TGTGAACTACCTCTCACAGA+AGG - chr8_3:15482336-15482355 None:intergenic 45.0%
GAGAGACATGGAAAAGCCAT+TGG + chr8_3:15482405-15482424 Msa1278870:CDS 45.0%
! CCTTTAGTAACACCGGTTGA+AGG - chr8_3:15482495-15482514 None:intergenic 45.0%
!! CCTTCAACCGGTGTTACTAA+AGG + chr8_3:15482492-15482511 Msa1278870:CDS 45.0%
AAACATCTGAGCGAGATGGT+AGG + chr8_3:15482615-15482634 Msa1278870:CDS 45.0%
GCCACTTAGTAGTCCTAGAA+GGG + chr8_3:15482728-15482747 Msa1278870:CDS 45.0%
!! TCCCTTCTAGGACTACTAAG+TGG - chr8_3:15482732-15482751 None:intergenic 45.0%
GTCGTCTGAGAGATTTGAGT+CGG - chr8_3:15482832-15482851 None:intergenic 45.0%
GAATCTTCCTCAGAACCAGT+TGG + chr8_3:15483048-15483067 Msa1278870:CDS 45.0%
ATTGAAGAGTGAGAGGGAGA+TGG - chr8_3:15483560-15483579 None:intergenic 45.0%
CCAGTGATTGAAGAGTGAGA+GGG - chr8_3:15483566-15483585 None:intergenic 45.0%
CCTCTCACTCTTCAATCACT+GGG + chr8_3:15483564-15483583 Msa1278870:CDS 45.0%
TCTGGATGCACCATTCTTAG+AGG + chr8_3:15483646-15483665 Msa1278870:CDS 45.0%
! CAGGCATCATCCTCTAAGAA+TGG - chr8_3:15483659-15483678 None:intergenic 45.0%
! ATGCTTACCAGGTTGACATC+TGG - chr8_3:15483693-15483712 None:intergenic 45.0%
TGAGTGCATGAATGCTTACC+AGG - chr8_3:15483704-15483723 None:intergenic 45.0%
TGGTAAGCATTCATGCACTC+AGG + chr8_3:15483703-15483722 Msa1278870:intron 45.0%
CTAGCATCTTGTCTGAGGAA+AGG - chr8_3:15484611-15484630 None:intergenic 45.0%
! AGACCCTTCCTTGTTTGATC+AGG + chr8_3:15484629-15484648 Msa1278870:CDS 45.0%
GTTTCTGATCATGGCATAGC+CGG - chr8_3:15484671-15484690 None:intergenic 45.0%
!! GGGGTTTGTTGCGATTACTT+CGG + chr8_3:15484723-15484742 Msa1278870:CDS 45.0%
TGGTATCAGAAGGAGTCTGT+TGG + chr8_3:15484817-15484836 Msa1278870:CDS 45.0%
GGAAAAATGTGGGTCATGGA+TGG + chr8_3:15484896-15484915 Msa1278870:CDS 45.0%
CTGTTTCGGCTTCAAATCGA+AGG - chr8_3:15484923-15484942 None:intergenic 45.0%
! CGATTTGAAGCCGAAACAGT+TGG + chr8_3:15484924-15484943 Msa1278870:CDS 45.0%
AGTTCCTGGTATACTTGAGG+AGG - chr8_3:15485104-15485123 None:intergenic 45.0%
TATTAGCTGCTGGTGTGTCA+TGG + chr8_3:15485350-15485369 Msa1278870:three_prime_UTR 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG + chr8_3:15480331-15480350 Msa1278870:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG + chr8_3:15480332-15480351 Msa1278870:intron 5.0%
!!! TTAAAAATTCATAATTTTAT+AGG + chr8_3:15483393-15483412 Msa1278870:intron 5.0%
!!! TAAAAATTCATAATTTTATA+GGG + chr8_3:15483394-15483413 Msa1278870:intron 5.0%
GCCACTGAAACAAGAGCTCA+TGG - chr8_3:15479460-15479479 None:intergenic 50.0%
AGTCTCAAAGACGTGCTGTG+CGG + chr8_3:15480706-15480725 Msa1278870:CDS 50.0%
!! AAGATAAGGCGGGCTGTATG+TGG + chr8_3:15480736-15480755 Msa1278870:CDS 50.0%
!! AGATAAGGCGGGCTGTATGT+GGG + chr8_3:15480737-15480756 Msa1278870:CDS 50.0%
TTCGCCATGGTCACTCTACT+AGG + chr8_3:15480781-15480800 Msa1278870:CDS 50.0%
!! GTTTGAGGCGTTGAGCGATA+TGG + chr8_3:15481115-15481134 Msa1278870:CDS 50.0%
TCCATGATGCATGGCGATGA+TGG + chr8_3:15481781-15481800 Msa1278870:CDS 50.0%
TCCATCATCGCCATGCATCA+TGG - chr8_3:15481785-15481804 None:intergenic 50.0%
GCTATAGGAAGGGAGAGACA+TGG + chr8_3:15482393-15482412 Msa1278870:CDS 50.0%
AGCGATTGTGGAGCGTGAAA+AGG + chr8_3:15482545-15482564 Msa1278870:CDS 50.0%
GCGATTGTGGAGCGTGAAAA+GGG + chr8_3:15482546-15482565 Msa1278870:CDS 50.0%
CGCCACTTAGTAGTCCTAGA+AGG + chr8_3:15482727-15482746 Msa1278870:CDS 50.0%
TAGTCCTAGAAGGGATTGGG+AGG + chr8_3:15482737-15482756 Msa1278870:CDS 50.0%
TGATCCTCCCAATCCCTTCT+AGG - chr8_3:15482744-15482763 None:intergenic 50.0%
CAGATTCTACATCCCCTGCA+CGG - chr8_3:15483008-15483027 None:intergenic 50.0%
CTTTCTGTACTGAGGCCAAC+TGG - chr8_3:15483066-15483085 None:intergenic 50.0%
GGTCAGCACTTTCTGTACTG+AGG - chr8_3:15483074-15483093 None:intergenic 50.0%
AGTGAGAGGGAGATGGTGAT+TGG - chr8_3:15483553-15483572 None:intergenic 50.0%
CCCTCTCACTCTTCAATCAC+TGG + chr8_3:15483563-15483582 Msa1278870:CDS 50.0%
CCCAGTGATTGAAGAGTGAG+AGG - chr8_3:15483567-15483586 None:intergenic 50.0%
!! GAGAGTACCACAGATGCATC+CGG + chr8_3:15483602-15483621 Msa1278870:CDS 50.0%
! AGAGTACCACAGATGCATCC+GGG + chr8_3:15483603-15483622 Msa1278870:CDS 50.0%
TCCAGAACAGACACTGGACT+TGG - chr8_3:15483632-15483651 None:intergenic 50.0%
TTAGAGGATGATGCCTGCTC+TGG + chr8_3:15483662-15483681 Msa1278870:CDS 50.0%
TAGAGGATGATGCCTGCTCT+GGG + chr8_3:15483663-15483682 Msa1278870:CDS 50.0%
TTGTCAATCCAGAGGCTTGC+AGG - chr8_3:15484566-15484585 None:intergenic 50.0%
AGGGTCTAGCATCTTGTCTG+AGG - chr8_3:15484616-15484635 None:intergenic 50.0%
TGATCATGGCATAGCCGGTT+TGG - chr8_3:15484666-15484685 None:intergenic 50.0%
! ATTTTGTCCAACGTGTGCGG+CGG - chr8_3:15484861-15484880 None:intergenic 50.0%
ACCACCTCCTCAAGTATACC+AGG + chr8_3:15485097-15485116 Msa1278870:three_prime_UTR 50.0%
TCCTGGTATACTTGAGGAGG+TGG - chr8_3:15485101-15485120 None:intergenic 50.0%
!! GATAAGGCGGGCTGTATGTG+GGG + chr8_3:15480738-15480757 Msa1278870:CDS 55.0%
CGAAGCAGCAAGCACTCTGA+TGG + chr8_3:15480825-15480844 Msa1278870:CDS 55.0%
CTTTGCATCGCCAGCACTCA+AGG + chr8_3:15481689-15481708 Msa1278870:CDS 55.0%
!! ACTGAGGCCAACTGGTTCTG+AGG - chr8_3:15483058-15483077 None:intergenic 55.0%
GCCAAGTCCAGTGTCTGTTC+TGG + chr8_3:15483628-15483647 Msa1278870:CDS 55.0%
GGTGCATCCAGAACAGACAC+TGG - chr8_3:15483638-15483657 None:intergenic 55.0%
! ACATCTGGAGTTCCCAGAGC+AGG - chr8_3:15483678-15483697 None:intergenic 55.0%
GGGAACTCCAGATGTCAACC+TGG + chr8_3:15483683-15483702 Msa1278870:CDS 55.0%
TCATGCACTCAGGCCCTGTT+TGG + chr8_3:15483713-15483732 Msa1278870:intron 55.0%
AAAGCAGTCCTGCAAGCCTC+TGG + chr8_3:15484555-15484574 Msa1278870:CDS 55.0%
! TTTTGTCCAACGTGTGCGGC+GGG - chr8_3:15484860-15484879 None:intergenic 55.0%
GTACCACAGATGCATCCGGG+CGG + chr8_3:15483606-15483625 Msa1278870:CDS 60.0%
TTTGTCCAACGTGTGCGGCG+GGG - chr8_3:15484859-15484878 None:intergenic 60.0%
AGACACTGGACTTGGCCGCC+CGG - chr8_3:15483624-15483643 None:intergenic 65.0%
TTGTCCAACGTGTGCGGCGG+GGG - chr8_3:15484858-15484877 None:intergenic 65.0%
TGGCCGCCCGGATGCATCTG+TGG - chr8_3:15483612-15483631 None:intergenic 70.0%
! AACGTGTGCGGCGGGGGCAT+GGG - chr8_3:15484852-15484871 None:intergenic 70.0%
CAACGTGTGCGGCGGGGGCA+TGG - chr8_3:15484853-15484872 None:intergenic 75.0%
CATGCCCCCGCCGCACACGT+TGG + chr8_3:15484851-15484870 Msa1278870:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 15479155 15485514 15479155 ID=Msa1278870;Name=Msa1278870
chr8_3 mRNA 15479155 15485514 15479155 ID=Msa1278870-mRNA-1;Parent=Msa1278870;Name=Msa1278870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=824|1|1|1|0.71|0.62|8|444|874
chr8_3 exon 15479155 15479291 15479155 ID=Msa1278870-mRNA-1:exon:5933;Parent=Msa1278870-mRNA-1
chr8_3 exon 15479423 15480018 15479423 ID=Msa1278870-mRNA-1:exon:5934;Parent=Msa1278870-mRNA-1
chr8_3 exon 15480605 15480846 15480605 ID=Msa1278870-mRNA-1:exon:5935;Parent=Msa1278870-mRNA-1
chr8_3 exon 15481090 15481160 15481090 ID=Msa1278870-mRNA-1:exon:5936;Parent=Msa1278870-mRNA-1
chr8_3 exon 15481457 15482912 15481457 ID=Msa1278870-mRNA-1:exon:5937;Parent=Msa1278870-mRNA-1
chr8_3 exon 15483013 15483152 15483013 ID=Msa1278870-mRNA-1:exon:5938;Parent=Msa1278870-mRNA-1
chr8_3 exon 15483533 15483704 15483533 ID=Msa1278870-mRNA-1:exon:5939;Parent=Msa1278870-mRNA-1
chr8_3 exon 15484436 15485514 15484436 ID=Msa1278870-mRNA-1:exon:5940;Parent=Msa1278870-mRNA-1
chr8_3 five_prime_UTR 15479155 15479291 15479155 ID=Msa1278870-mRNA-1:five_prime_utr;Parent=Msa1278870-mRNA-1
chr8_3 five_prime_UTR 15479423 15480018 15479423 ID=Msa1278870-mRNA-1:five_prime_utr;Parent=Msa1278870-mRNA-1
chr8_3 five_prime_UTR 15480605 15480695 15480605 ID=Msa1278870-mRNA-1:five_prime_utr;Parent=Msa1278870-mRNA-1
chr8_3 CDS 15480696 15480846 15480696 ID=Msa1278870-mRNA-1:cds;Parent=Msa1278870-mRNA-1
chr8_3 CDS 15481090 15481160 15481090 ID=Msa1278870-mRNA-1:cds;Parent=Msa1278870-mRNA-1
chr8_3 CDS 15481457 15482912 15481457 ID=Msa1278870-mRNA-1:cds;Parent=Msa1278870-mRNA-1
chr8_3 CDS 15483013 15483152 15483013 ID=Msa1278870-mRNA-1:cds;Parent=Msa1278870-mRNA-1
chr8_3 CDS 15483533 15483704 15483533 ID=Msa1278870-mRNA-1:cds;Parent=Msa1278870-mRNA-1
chr8_3 CDS 15484436 15485070 15484436 ID=Msa1278870-mRNA-1:cds;Parent=Msa1278870-mRNA-1
chr8_3 three_prime_UTR 15485071 15485514 15485071 ID=Msa1278870-mRNA-1:three_prime_utr;Parent=Msa1278870-mRNA-1
Gene Sequence

>Msa1278870

ATGGCAAAGAAGTCTCAAAGACGTGCTGTGCGGTATGAGAAAGATAAGGCGGGCTGTATGTGGGGATTTATTAGCATGCTTGATTTTCGCCATGGTCACTCTACTAGGAAGTTGATTGCGGATAAGAGACGAAGCAGCAAGCACTCTGATGGTGGTGTTGTACATTCTAGGAATAAGTTTGAGGCGTTGAGCGATATGGATGAAGTTTGTCATGGCACCTTTGACGGTGGAGAGAGTAAAAGACCAACAGTGAGAACTATTGCTAATAAGCCTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCACTGATCAAAATGCAATGAAGAATATAGATAATTCTGAAAGGCGTGAAGTTTTTCTGAAGTTAGATTCCAAAAGAAAAAAGAAATCTTCCGAGAGAAAACATGATATCGCTGATGATTTAAATTTGGGCGCAGCATCGAAATCTAAAACTTTGCATCGCCAGCACTCAAGGAAGCAATCTAAAGATAATCTTGACGTGGATACAATAATTGAAGAGTTTTGTAATCTAAGAGGTGTTTGTTCCATGATGCATGGCGATGATGGAGAAGTAGAAAAGCATGGTCAACCAAACCAGAAACAGAAGCATGTTGTTTCCGAAACTCATTCAAGAGATGCGATTCGTGAATTTGTGAATCAGATGATATTGAACGGAAAAGATCTGGAGGAAGCTAGAAAGTTTCTTTTCTCTGATGAAATAATGGAAGCACTTCAGCTTATAAGTTCAGATAAGGAATTGTTTCTTGCATTTCTACAAAATCCAAATCCACTTGTATTGAAATGCGTTCAAGAGTTTGAGAATTCTCATCGGGTTAAAGACAACGATTCCAACTTCTCGGAGCAAGATCATGGCAATAAAGAACAAACTAGTGAGATTGTTAACCATAAGAAGCATAACTTTTTCAGGAAAAAGGTGAAGTCTCAATCAAAAACTTCAACAAATGAAAATGTAAATACCAACATTTCAAATAGAATTGTCATTCTAAAGCCGGGATCAATTGGATCAGAAAATTCCGAAACTGGAAAGAACATTGCCTCATCTCTAGATTCTCATGATACTGTCGAGTACAATTCTCCTTCTGTGAGAGGTAGTTCACATTTTTCTCTTACAGAGATAAAAAAGAAATTAAAGCATGCTATAGGAAGGGAGAGACATGGAAAAGCCATTGGTAAAGACAATGTCGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTGCAAGGCCTTCAACCGGTGTTACTAAAGGAGACAAGACTGGTACTAATAACGATTTGGAAGCGATTGTGGAGCGTGAAAAGGGTATTTTTCCAAAACAAGGTGTTTCTAATTTATATATTGAGGCTAAGAAACATCTGAGCGAGATGGTAGGTAATGAAGATGAGAACATGATGGACTTGTCAAGTAGGCAAAATTCCAAAACCCTAGGAAGAATAATATCGTTTCCTGATTACAACTTTTCGCCACTTAGTAGTCCTAGAAGGGATTGGGAGGATCATTTTGTGACCGCAAAAACAAGACTTCGTGATGAAAACTATAACAATAAATCACAAGAAATTAAGTCCGACTCAAATCTCTCAGACGACCTAATTCACGTTGATAAGGAAGAAAATTGTTGTCCTGTTAGAGATGAGATAGTTACTGAAGGGGATGTAGAATCTGCAAAAGAGATTACTACTTTAGAATCTTCCTCAGAACCAGTTGGCCTCAGTACAGAAAGTGCTGACCAAAGCCATGATATCTCAGAAAGTTCTGATTGTGCAGAATTTTCTCAATGTTTGGAGCAGGATGTAACAGAACAAAACCAATCACCATCTCCCTCTCACTCTTCAATCACTGGGAACACTAAGGAGCAAGAGAGTACCACAGATGCATCCGGGCGGCCAAGTCCAGTGTCTGTTCTGGATGCACCATTCTTAGAGGATGATGCCTGCTCTGGGAACTCCAGATGTCAACCTGCTGAAGTACCTGTACAACCACTACATGTTCAATTCGAAGAACAAGATTCTTCTCTTGTGAATCAAATCAAAAGAGAAAAATATTGTATCGAAGAAAACGGATCGATATATGATTACATCAAAGCAGTCCTGCAAGCCTCTGGATTGACAAGAGATCAATTGTTGATGAAATGCCTTTCCTCAGACAAGATGCTAGACCCTTCCTTGTTTGATCAGGTAGAGTTATCACCAAACCGGCTATGCCATGATCAGAAACTCCTATACGAATGTATCAATGAAGTTCTCACAGGGGTTTGTTGCGATTACTTCGGCGCCTCGCCTTTTGTATCATTTGTAAGTCCTAGCATAAAGCCAACTCCAAATATGAAAACGGTTATTCTCATGGTATCAGAAGGAGTCTGTTGGTACTTACTTCCCATGCCCCCGCCGCACACGTTGGACAAAATTGTTAGGAAAGACATGGAAAAATGTGGGTCATGGATGGACCTTCGATTTGAAGCCGAAACAGTTGGTTTTGAACTAGGCGATGCCATTCTATCAGATCTGATGGAAGATACAATACTTGGCTGTGTAAGTAAGAGTTCAGAAGGGGGAAGTTATGAGCATAACGACGACAAGACTTGTGCCGATGCGTAA
Protein sequence

>Msa1278870

MAKKSQRRAVRYEKDKAGCMWGFISMLDFRHGHSTRKLIADKRRSSKHSDGGVVHSRNKFEALSDMDEVCHGTFDGGESKRPTVRTIANKPSVKKLIEEEMFTDQNAMKNIDNSERREVFLKLDSKRKKKSSERKHDIADDLNLGAASKSKTLHRQHSRKQSKDNLDVDTIIEEFCNLRGVCSMMHGDDGEVEKHGQPNQKQKHVVSETHSRDAIREFVNQMILNGKDLEEARKFLFSDEIMEALQLISSDKELFLAFLQNPNPLVLKCVQEFENSHRVKDNDSNFSEQDHGNKEQTSEIVNHKKHNFFRKKVKSQSKTSTNENVNTNISNRIVILKPGSIGSENSETGKNIASSLDSHDTVEYNSPSVRGSSHFSLTEIKKKLKHAIGRERHGKAIGKDNVGMRSPNKDHFFIEKIARPSTGVTKGDKTGTNNDLEAIVEREKGIFPKQGVSNLYIEAKKHLSEMVGNEDENMMDLSSRQNSKTLGRIISFPDYNFSPLSSPRRDWEDHFVTAKTRLRDENYNNKSQEIKSDSNLSDDLIHVDKEENCCPVRDEIVTEGDVESAKEITTLESSSEPVGLSTESADQSHDISESSDCAEFSQCLEQDVTEQNQSPSPSHSSITGNTKEQESTTDASGRPSPVSVLDAPFLEDDACSGNSRCQPAEVPVQPLHVQFEEQDSSLVNQIKREKYCIEENGSIYDYIKAVLQASGLTRDQLLMKCLSSDKMLDPSLFDQVELSPNRLCHDQKLLYECINEVLTGVCCDYFGASPFVSFVSPSIKPTPNMKTVILMVSEGVCWYLLPMPPPHTLDKIVRKDMEKCGSWMDLRFEAETVGFELGDAILSDLMEDTILGCVSKSSEGGSYEHNDDKTCADA*