AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0330340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330340 MtrunA17_Chr2g0312581 89.813 589 6 2 1 565 1 559 0.0 1053
Msa0330340 MtrunA17_Chr2g0293981 34.023 532 268 8 6 499 153 639 5.86e-94 303
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330340 AT1G79030.1 62.669 592 159 8 3 564 1 560 0.0 676
Msa0330340 AT1G16680.1 61.630 589 163 7 3 564 1 553 0.0 664
Msa0330340 AT1G79030.2 64.770 457 99 8 138 564 1 425 0.0 548
Msa0330340 AT5G49580.3 33.633 556 255 13 30 536 175 665 6.17e-92 297
Msa0330340 AT5G49580.1 33.633 556 255 13 30 536 175 665 6.17e-92 297
Msa0330340 AT5G49580.2 32.874 435 213 9 30 447 175 547 2.67e-69 233

Find 192 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGGGTCATTGGATTTA+TGG 0.133402 2_4:+44629871 Msa0330340:five_prime_UTR
TGAAAGAAATGCAAGGTTTA+TGG 0.156009 2_4:-44632502 None:intergenic
TGTATCTCTGTTCTTATATT+AGG 0.158216 2_4:+44635272 Msa0330340:three_prime_UTR
GTGAACTGCTGTGGGATTTC+TGG 0.175841 2_4:-44633582 None:intergenic
ATGCAGGGGTTGCTCGAAAT+TGG 0.197102 2_4:+44630135 Msa0330340:CDS
TGATAAGCAGAAAGAAATTT+TGG 0.214983 2_4:+44632725 Msa0330340:CDS
GCACGCTTGGTGGTATTAAT+TGG 0.222439 2_4:+44632420 Msa0330340:CDS
CCACCAAGCGTGCACGATTT+AGG 0.231062 2_4:-44632410 None:intergenic
TCCGATTGCTTCTGCTCTTC+AGG 0.238239 2_4:-44632582 None:intergenic
ATTTATCCTAAACGGGTAAA+AGG 0.242249 2_4:+44629438 Msa0330340:five_prime_UTR
AGATGGATGGGTTGAATATA+AGG 0.245664 2_4:+44634082 Msa0330340:CDS
TGATCTCAGTAATCCATTTC+GGG 0.248137 2_4:-44635017 None:intergenic
TGGGAATCTACTTGAGTTAC+AGG 0.274469 2_4:-44634737 None:intergenic
TGAAATGTGGTAAAGAAAAT+TGG 0.282168 2_4:-44635120 None:intergenic
TTGATCTCAGTAATCCATTT+CGG 0.284846 2_4:-44635018 None:intergenic
GTTACTCACATTGATCATTA+AGG 0.285679 2_4:+44635202 Msa0330340:three_prime_UTR
GGTTTACGTGCTTGTTAGTA+TGG 0.289745 2_4:+44630297 Msa0330340:CDS
ATGAAGAAGAATATTGGATT+TGG 0.289824 2_4:-44629237 None:intergenic
AAAGAGAGAAAGAGGTAAAA+TGG 0.293629 2_4:-44629698 None:intergenic
GGTTGAATATAAGGGATCTT+TGG 0.299665 2_4:+44634091 Msa0330340:CDS
TAGGGTTGTTCAATCAAGTT+TGG 0.309311 2_4:+44630008 Msa0330340:CDS
AAGTAGATTCCCATGGGATT+TGG 0.312431 2_4:+44634747 Msa0330340:CDS
TGGGGTTGCTGTCCAATACT+TGG 0.313236 2_4:+44630976 Msa0330340:CDS
TTTCAGTCTTTCATTAAGTT+TGG 0.319308 2_4:+44630211 Msa0330340:CDS
TGGCATACATCCACAAAATA+AGG 0.320756 2_4:-44631039 None:intergenic
CACCAAGCGTGCACGATTTA+GGG 0.330951 2_4:-44632409 None:intergenic
AGTGCGGTAATTCACATGTT+TGG 0.344384 2_4:+44633878 Msa0330340:CDS
GGTGACAGCAGGTGGTTTAC+TGG 0.344960 2_4:-44632691 None:intergenic
TGCAGGGGTTGCTCGAAATT+GGG 0.345633 2_4:+44630136 Msa0330340:CDS
GATCAAGGTTATTTATTTGA+TGG 0.350421 2_4:+44629825 Msa0330340:five_prime_UTR
TTGAAGTGATTTATCCTAAA+CGG 0.353634 2_4:+44629430 Msa0330340:five_prime_UTR
AAGAGAATGAAGAAGAATAT+TGG 0.355344 2_4:-44629243 None:intergenic
AGGATAAATCACTTCAATAA+AGG 0.355742 2_4:-44629424 None:intergenic
AAGCTCGGTCGGTGGGTGTT+AGG 0.357074 2_4:-44634679 None:intergenic
GTGAAATTTGTTGTAGATCA+AGG 0.358558 2_4:+44629810 Msa0330340:five_prime_UTR
GAAGATCAAGATTGAAACTT+TGG 0.363008 2_4:-44629307 None:intergenic
ATTTGACCTGTGGCTTCAAC+AGG 0.368409 2_4:+44634804 Msa0330340:CDS
AGGGTTGTTCAATCAAGTTT+GGG 0.374931 2_4:+44630009 Msa0330340:CDS
TTTACTCCATCCAATCCCTT+TGG 0.376262 2_4:-44634978 None:intergenic
CTTCAACAGGCTTTAGCATC+TGG 0.376602 2_4:+44634817 Msa0330340:CDS
GTCTTCATCCATCATCATTT+CGG 0.377560 2_4:-44634773 None:intergenic
TTACTCCATCCAATCCCTTT+GGG 0.377996 2_4:-44634977 None:intergenic
GTGCGGTAATTCACATGTTT+GGG 0.380056 2_4:+44633879 Msa0330340:CDS
CAATACTTGGGTTATACTCC+TGG 0.380895 2_4:+44630989 Msa0330340:CDS
TAGCATCACAAAAGGGTCAT+TGG 0.382212 2_4:+44629863 Msa0330340:five_prime_UTR
TGAATGTTTCAGGTTACTGC+TGG 0.391743 2_4:+44630956 Msa0330340:intron
TCATGCAGGGAATGGCTTGT+AGG 0.396238 2_4:+44634656 Msa0330340:intron
TCATGGTGATGGAGGATATA+GGG 0.396369 2_4:+44629990 Msa0330340:exon
TGAAGTGATTTATCCTAAAC+GGG 0.401435 2_4:+44629431 Msa0330340:five_prime_UTR
TTCAAATTGCCTCAAAAGAA+AGG 0.403167 2_4:+44634883 Msa0330340:CDS
AGAAATGAAGAATGAGGAAA+AGG 0.404570 2_4:-44629281 None:intergenic
TGGTTACTAAGGATTTCTTT+TGG 0.406880 2_4:+44635317 Msa0330340:three_prime_UTR
GGCATTGGCCGATGGTATGC+AGG 0.413497 2_4:+44630119 Msa0330340:CDS
TTTGTTTAAGAAACCCGAAA+TGG 0.414667 2_4:+44635004 Msa0330340:three_prime_UTR
GTCTTGCTGAAAAGCTCAAT+AGG 0.415248 2_4:+44634927 Msa0330340:exon
ATCAAGTTTGGGGATGGCTT+CGG 0.416194 2_4:+44630020 Msa0330340:CDS
CTTAATCATTATGATGCCCT+TGG 0.419772 2_4:+44632810 Msa0330340:CDS
ATAAGAACAGAGATACAATA+AGG 0.420872 2_4:-44635266 None:intergenic
CCTAAATCGTGCACGCTTGG+TGG 0.422799 2_4:+44632410 Msa0330340:CDS
TGCTTTGGCCTTGCTCCTGT+TGG 0.422898 2_4:-44633908 None:intergenic
GATGGATGGGTTGAATATAA+GGG 0.424705 2_4:+44634083 Msa0330340:CDS
CTGTATCCGTCTGGATTCTT+CGG 0.424876 2_4:-44633848 None:intergenic
GACCTGACACCATCTTGCTT+TGG 0.429270 2_4:-44633923 None:intergenic
TGGAAGGACTCTGCTGTAAG+GGG 0.429309 2_4:+44630187 Msa0330340:CDS
GTCATGGTGATGGAGGATAT+AGG 0.429732 2_4:+44629989 Msa0330340:exon
ACTTTCATCAAGTTTGTAAG+TGG 0.432944 2_4:+44629955 Msa0330340:five_prime_UTR
AATTAAAGACTTCAAATTCA+CGG 0.434500 2_4:-44629754 None:intergenic
TTGGAAGGACTCTGCTGTAA+GGG 0.436084 2_4:+44630186 Msa0330340:CDS
GAAATGAAGAATGAGGAAAA+GGG 0.438569 2_4:-44629280 None:intergenic
CTCCCTAAATCGTGCACGCT+TGG 0.443827 2_4:+44632407 Msa0330340:CDS
GAAACTTCAATGTGCATATG+AGG 0.445625 2_4:+44633337 Msa0330340:CDS
CACAGTTCGAGCACGCCAAC+AGG 0.445831 2_4:-44630056 None:intergenic
TGCAAATTCTCAGATTCAAC+TGG 0.451152 2_4:-44632654 None:intergenic
TTGAATGTGAGAGTATTTAG+TGG 0.453509 2_4:+44629643 Msa0330340:five_prime_UTR
TTTGGAAGGACTCTGCTGTA+AGG 0.454087 2_4:+44630185 Msa0330340:CDS
TTACTGAGATCAAAACTAGA+AGG 0.456205 2_4:+44635028 Msa0330340:three_prime_UTR
AACCCTAAAATCTGATTGAA+AGG 0.456869 2_4:-44629349 None:intergenic
CCAAGCCAACCATGTTTACA+TGG 0.459618 2_4:-44634702 None:intergenic
CTTTGTGCACTGTATCCGTC+TGG 0.460373 2_4:-44633857 None:intergenic
GGATTGAACAATGAAAACTT+TGG 0.461683 2_4:-44629216 None:intergenic
TGATGATTTAGCATCACAAA+AGG 0.463802 2_4:+44629855 Msa0330340:five_prime_UTR
TCTGACTTCGATGTATTGCT+TGG 0.466273 2_4:+44630276 Msa0330340:CDS
CCATGTAAACATGGTTGGCT+TGG 0.467923 2_4:+44634702 Msa0330340:CDS
TGAGGAAAAGGGGTTTCAAA+AGG 0.468417 2_4:-44629269 None:intergenic
TTCATTGCCTACATCCCAAA+GGG 0.469914 2_4:+44634963 Msa0330340:three_prime_UTR
ACCCTAAAATCTGATTGAAA+GGG 0.471290 2_4:-44629348 None:intergenic
AGGAGGAAAGCTTGTAACTT+AGG 0.471670 2_4:-44631829 None:intergenic
ATCAAGGTTATTTATTTGAT+GGG 0.474990 2_4:+44629826 Msa0330340:five_prime_UTR
GAAGCAATCGGAGACAGTTA+TGG 0.475066 2_4:+44632593 Msa0330340:CDS
ATCCCACAGCAGTTCACATC+AGG 0.475853 2_4:+44633588 Msa0330340:CDS
CAGGAGTATAACCCAAGTAT+TGG 0.476147 2_4:-44630988 None:intergenic
TGTTCAATCAAGTTTGGGGA+TGG 0.476331 2_4:+44630014 Msa0330340:CDS
CTGTTGGCGTGCTCGAACTG+TGG 0.477803 2_4:+44630057 Msa0330340:CDS
TGCCTACATCCCAAAGGGAT+TGG 0.478963 2_4:+44634968 Msa0330340:three_prime_UTR
GCTTTCCTCCTCATTATCCT+AGG 0.480037 2_4:+44631841 Msa0330340:CDS
GGCCAAAGCAAGATGGTGTC+AGG 0.480599 2_4:+44633921 Msa0330340:CDS
CGATGTTTATTGAACGGCAT+TGG 0.480918 2_4:+44630104 Msa0330340:CDS
ATGTTTGGGTATGCACCAAC+AGG 0.481258 2_4:+44633893 Msa0330340:CDS
TCAGATTCAACTGGTGGGAT+AGG 0.484618 2_4:-44632645 None:intergenic
GAGAGTATTTAGTGGTATCA+TGG 0.485450 2_4:+44629651 Msa0330340:five_prime_UTR
TCTTGCTGAAAAGCTCAATA+GGG 0.496208 2_4:+44634928 Msa0330340:exon
CAAGTAAAAGTGGGATGGCT+TGG 0.506505 2_4:+44632468 Msa0330340:CDS
GTAAAGAAAATTGGCAACCT+TGG 0.506912 2_4:-44635111 None:intergenic
ATCCAATCCCTTTGGGATGT+AGG 0.511524 2_4:-44634970 None:intergenic
AGCTTCCATGTAAACATGGT+TGG 0.511891 2_4:+44634697 Msa0330340:CDS
AAGTCTTTAATTTATGATGT+CGG 0.518300 2_4:+44629765 Msa0330340:five_prime_UTR
TCAAATTGCCTCAAAAGAAA+GGG 0.520660 2_4:+44634884 Msa0330340:CDS
TCCTGAAGAGCAGAAGCAAT+CGG 0.523623 2_4:+44632581 Msa0330340:CDS
GAATGTTTCAGGTTACTGCT+GGG 0.526617 2_4:+44630957 Msa0330340:intron
CCTCAAAACGCAGGAAGAGT+TGG 0.527025 2_4:+44634854 Msa0330340:CDS
AATACTTGGGTTATACTCCT+GGG 0.528723 2_4:+44630990 Msa0330340:CDS
TTTATCCTAAACGGGTAAAA+GGG 0.529720 2_4:+44629439 Msa0330340:five_prime_UTR
TATGCCAACTTTCTGATCAC+AGG 0.529729 2_4:+44631055 Msa0330340:CDS
ACAGGATTACTACTCATAGT+TGG 0.530073 2_4:+44631073 Msa0330340:CDS
TACATCCCAAAGGGATTGGA+TGG 0.530497 2_4:+44634972 Msa0330340:three_prime_UTR
ACCATGTTTACATGGAAGCT+CGG 0.530586 2_4:-44634694 None:intergenic
TAATCCTGTGATCAGAAAGT+TGG 0.531592 2_4:-44631059 None:intergenic
CATAACTCTAAAATGAATGC+TGG 0.533736 2_4:-44635399 None:intergenic
GGGGTTGCTGTCCAATACTT+GGG 0.535229 2_4:+44630977 Msa0330340:CDS
AAATCCTACCTAGGATAATG+AGG 0.537407 2_4:-44631849 None:intergenic
TGGAGCAGAAATGAAGAATG+AGG 0.539831 2_4:-44629287 None:intergenic
GTATTCTGTTCAAGTAAAAG+TGG 0.543915 2_4:+44632458 Msa0330340:CDS
TTAATTTATGATGTCGGAGT+AGG 0.544017 2_4:+44629771 Msa0330340:five_prime_UTR
GGTCATTGGATTTATGGTGA+TGG 0.544341 2_4:+44629877 Msa0330340:five_prime_UTR
TTTGGACGCCGAAATGATGA+TGG 0.545956 2_4:+44634765 Msa0330340:CDS
TATTGAACGGCATTGGCCGA+TGG 0.550013 2_4:+44630111 Msa0330340:CDS
GAGGAAAAGGGGTTTCAAAA+GGG 0.552128 2_4:-44629268 None:intergenic
AGCAAAGGATGGAGATGGAT+GGG 0.552152 2_4:+44634070 Msa0330340:CDS
ATTAAGAAAAGAAGAATCCA+TGG 0.556650 2_4:+44633546 Msa0330340:CDS
GATGATTTAGCATCACAAAA+GGG 0.556732 2_4:+44629856 Msa0330340:five_prime_UTR
CTAAAGCCTGTTGAAGCCAC+AGG 0.559744 2_4:-44634810 None:intergenic
GCATTGGCCGATGGTATGCA+GGG 0.560371 2_4:+44630120 Msa0330340:CDS
CATAAAATATATGTACACTA+AGG 0.560794 2_4:+44635147 Msa0330340:three_prime_UTR
ATTTCGGCGTCCAAATCCCA+TGG 0.562239 2_4:-44634757 None:intergenic
AAGCAAAGGATGGAGATGGA+TGG 0.562575 2_4:+44634069 Msa0330340:CDS
AAACTGCGATGTTTATTGAA+CGG 0.563453 2_4:+44630098 Msa0330340:CDS
TACATGGAAGCTCGGTCGGT+GGG 0.566355 2_4:-44634686 None:intergenic
GGAAGGACTCTGCTGTAAGG+GGG 0.567571 2_4:+44630188 Msa0330340:CDS
TACCTGATGTGAACTGCTGT+GGG 0.569328 2_4:-44633590 None:intergenic
GCAGGGGTTGCTCGAAATTG+GGG 0.573947 2_4:+44630137 Msa0330340:CDS
CAGTTTCATCAAGCAAAGGA+TGG 0.576801 2_4:+44634059 Msa0330340:CDS
ATCTGTAGAGGTCATGGTGA+TGG 0.577651 2_4:+44629979 Msa0330340:exon
AAATGAAGAATGAGGAAAAG+GGG 0.582281 2_4:-44629279 None:intergenic
CATCAAGCAAAGGATGGAGA+TGG 0.583990 2_4:+44634065 Msa0330340:CDS
GGATTACTACTCATAGTTGG+AGG 0.586894 2_4:+44631076 Msa0330340:CDS
CCCTAAAATCTGATTGAAAG+GGG 0.587427 2_4:-44629347 None:intergenic
TGTCATTTGAAAGAAATGCA+AGG 0.588628 2_4:-44632509 None:intergenic
TGAGTAACTCCTATAACCCT+AGG 0.588717 2_4:-44635187 None:intergenic
AAATTCTCAGATTCAACTGG+TGG 0.588839 2_4:-44632651 None:intergenic
CTGTCAGTTTCATCAAGCAA+AGG 0.589407 2_4:+44634055 Msa0330340:CDS
CTGTTCAAGTAAAAGTGGGA+TGG 0.589512 2_4:+44632463 Msa0330340:CDS
TTTGTGGCGGCTAAATCCAA+GGG 0.591814 2_4:-44632826 None:intergenic
GTGGTGAATTATAAGAGCCA+AGG 0.591876 2_4:+44635094 Msa0330340:three_prime_UTR
GAAATGCAAGGTTTATGGCA+AGG 0.596267 2_4:-44632497 None:intergenic
TGTTTACATGGAAGCTCGGT+CGG 0.599305 2_4:-44634690 None:intergenic
ATTCAATTGATGAAATGAGA+AGG 0.599840 2_4:+44632775 Msa0330340:CDS
TGTAGAGGTCATGGTGATGG+AGG 0.601487 2_4:+44629982 Msa0330340:exon
TTTCAGAACTGAGCATGAGT+CGG 0.608276 2_4:+44635226 Msa0330340:three_prime_UTR
TTACATGGAAGCTCGGTCGG+TGG 0.608397 2_4:-44634687 None:intergenic
TTTGCGAGTCCTCAAAACGC+AGG 0.609028 2_4:+44634845 Msa0330340:CDS
ACGAAGAGGCATTTGACCTG+TGG 0.610097 2_4:+44634794 Msa0330340:CDS
GAGCAACCCCTGCATACCAT+CGG 0.610183 2_4:-44630127 None:intergenic
TTACCTGATGTGAACTGCTG+TGG 0.612719 2_4:-44633591 None:intergenic
TATTCTGTTCAAGTAAAAGT+GGG 0.614296 2_4:+44632459 Msa0330340:CDS
GTAACTCAAGTAGATTCCCA+TGG 0.614310 2_4:+44634740 Msa0330340:CDS
GGAGCAAGGCCAAAGCAAGA+TGG 0.614781 2_4:+44633914 Msa0330340:CDS
AATTCTCAGATTCAACTGGT+GGG 0.617335 2_4:-44632650 None:intergenic
GGGTTGTTCAATCAAGTTTG+GGG 0.617373 2_4:+44630010 Msa0330340:CDS
TTATTAGCATGTATATACAA+AGG 0.617487 2_4:-44635341 None:intergenic
CTGCTTATCAACAACTGATG+TGG 0.617904 2_4:-44632712 None:intergenic
TTTGTAAGTGGAATCTGTAG+AGG 0.618896 2_4:+44629967 Msa0330340:five_prime_UTR
ACAACTGATGTGGTGACAGC+AGG 0.620614 2_4:-44632702 None:intergenic
ATCTACTTGAGTTACAGGAA+TGG 0.621712 2_4:-44634732 None:intergenic
TTTCATTGCCTACATCCCAA+AGG 0.622491 2_4:+44634962 Msa0330340:three_prime_UTR
TAACTCAAGTAGATTCCCAT+GGG 0.623997 2_4:+44634741 Msa0330340:CDS
CTAAACGGGTAAAAGGGTCA+AGG 0.625600 2_4:+44629445 Msa0330340:five_prime_UTR
AATGTTTCAGGTTACTGCTG+GGG 0.626076 2_4:+44630958 Msa0330340:intron
AGTGGAATCTGTAGAGGTCA+TGG 0.628752 2_4:+44629973 Msa0330340:exon
GGTATGCACCAACAGGAGCA+AGG 0.632037 2_4:+44633900 Msa0330340:CDS
CGGATACAGTGCACAAAGTG+CGG 0.640827 2_4:+44633862 Msa0330340:CDS
CCTAAAATCTGATTGAAAGG+GGG 0.645681 2_4:-44629346 None:intergenic
GATGATGGATGAAGACGAAG+AGG 0.646374 2_4:+44634780 Msa0330340:CDS
TTTCGGCGTCCAAATCCCAT+GGG 0.650751 2_4:-44634756 None:intergenic
AACAGAATACATAGCATATG+CGG 0.653102 2_4:-44632445 None:intergenic
TGATGCTCTTGCTTATAATG+TGG 0.655740 2_4:+44630239 Msa0330340:CDS
CATTGGCCGATGGTATGCAG+GGG 0.658782 2_4:+44630121 Msa0330340:CDS
ACCGAGCTTCCATGTAAACA+TGG 0.658792 2_4:+44634693 Msa0330340:CDS
ATCGTTCCGAAGAATCCAGA+CGG 0.659900 2_4:+44633842 Msa0330340:CDS
GGTCACGAAAAGATGCCTGT+TGG 0.663139 2_4:+44630041 Msa0330340:CDS
TCCTACCTAGGATAATGAGG+AGG 0.673070 2_4:-44631846 None:intergenic
ACTGATGTGGTGACAGCAGG+TGG 0.695798 2_4:-44632699 None:intergenic
GATGAGTCATGAGAGCATTG+TGG 0.727305 2_4:+44635075 Msa0330340:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATTATTATATAAATT+AGG - chr2_4:44632276-44632295 None:intergenic 0.0%
!!! TTTTAATGAAAATTCATAAA+TGG - chr2_4:44630397-44630416 None:intergenic 10.0%
!! AAAAAAAAAAAAAACTCATT+CGG + chr2_4:44635365-44635384 Msa0330340:three_prime_UTR 10.0%
!!! ATTTTAAGAAAAAAAGTCAA+AGG - chr2_4:44630533-44630552 None:intergenic 15.0%
!!! ATTATACAAATTTTATGTAG+AGG + chr2_4:44630561-44630580 Msa0330340:intron 15.0%
!! TTTAATATTTGTTTGTGTTT+GGG + chr2_4:44631652-44631671 Msa0330340:intron 15.0%
!! AAGGAAAAAAAAAATCAAAT+AGG - chr2_4:44631684-44631703 None:intergenic 15.0%
!! AAGCATAAAAAATTGAAAAT+GGG - chr2_4:44631735-44631754 None:intergenic 15.0%
!! AAAGCATAAAAAATTGAAAA+TGG - chr2_4:44631736-44631755 None:intergenic 15.0%
!!! TTTTCAATTTTTTATGCTTT+TGG + chr2_4:44631736-44631755 Msa0330340:intron 15.0%
!!! TATTATAAGAACTTTTAACA+AGG - chr2_4:44632183-44632202 None:intergenic 15.0%
!! CTATCTTATAATTGATATAT+TGG + chr2_4:44633387-44633406 Msa0330340:intron 15.0%
!! TCCTTAATATATAATCTATT+AGG + chr2_4:44633685-44633704 Msa0330340:intron 15.0%
!! TCCTAATAGATTATATATTA+AGG - chr2_4:44633689-44633708 None:intergenic 15.0%
!!! TTTTTCTTTAATTGTTCAAA+AGG - chr2_4:44633792-44633811 None:intergenic 15.0%
!! TTGAACAATTAAAGAAAAAA+AGG + chr2_4:44633793-44633812 Msa0330340:intron 15.0%
!!! TTCAAGTTCATATTTTTGAT+GGG + chr2_4:44629393-44629412 Msa0330340:five_prime_UTR 20.0%
!! AATTAAAGACTTCAAATTCA+CGG - chr2_4:44629757-44629776 None:intergenic 20.0%
!!! AAGTCTTTAATTTATGATGT+CGG + chr2_4:44629765-44629784 Msa0330340:five_prime_UTR 20.0%
!! ATCAAGGTTATTTATTTGAT+GGG + chr2_4:44629826-44629845 Msa0330340:five_prime_UTR 20.0%
!!! TTACATTATCGTTGATTTTT+TGG + chr2_4:44630167-44630186 Msa0330340:CDS 20.0%
!!! ATGAATTTTCATTAAAACTG+CGG + chr2_4:44630400-44630419 Msa0330340:intron 20.0%
!!! ACATTTTACAATTACCTTAT+TGG + chr2_4:44630466-44630485 Msa0330340:intron 20.0%
!!! ATGATTTTAATTTATCTCTG+TGG + chr2_4:44630760-44630779 Msa0330340:intron 20.0%
!!! CAATATTTTGAACTCAAATT+AGG - chr2_4:44630839-44630858 None:intergenic 20.0%
!!! AATTTGAGTTCAAAATATTG+TGG + chr2_4:44630839-44630858 Msa0330340:intron 20.0%
!!! TCATATTGAAATTTTGATTC+TGG + chr2_4:44631309-44631328 Msa0330340:intron 20.0%
!! AACAACATATTTAACACTAA+AGG - chr2_4:44631604-44631623 None:intergenic 20.0%
!! GTTTAATATTTGTTTGTGTT+TGG + chr2_4:44631651-44631670 Msa0330340:intron 20.0%
!! GTTAATATAATGTTCTATGA+CGG + chr2_4:44632103-44632122 Msa0330340:intron 20.0%
!!! TTTTAACAAGGATGAAAAAA+TGG - chr2_4:44632171-44632190 None:intergenic 20.0%
!! AGTTCTTATAATAAAGTCAT+TGG + chr2_4:44632190-44632209 Msa0330340:intron 20.0%
!! GTTCTTATAATAAAGTCATT+GGG + chr2_4:44632191-44632210 Msa0330340:intron 20.0%
!! AAATATTTGATGTATCAGAA+TGG + chr2_4:44634252-44634271 Msa0330340:intron 20.0%
!! AATATTTGATGTATCAGAAT+GGG + chr2_4:44634253-44634272 Msa0330340:intron 20.0%
!!! TGATACATTAGTTTGTTTAT+AGG + chr2_4:44634592-44634611 Msa0330340:intron 20.0%
!!! TATTTTATGGATATGAAATG+TGG - chr2_4:44635136-44635155 None:intergenic 20.0%
!!! CTTAGTGTACATATATTTTA+TGG - chr2_4:44635149-44635168 None:intergenic 20.0%
!! CATAAAATATATGTACACTA+AGG + chr2_4:44635147-44635166 Msa0330340:three_prime_UTR 20.0%
!! TTATTAGCATGTATATACAA+AGG - chr2_4:44635344-44635363 None:intergenic 20.0%
!!! TTGAAAAGTTTTGTAAAGAG+AGG - chr2_4:44629132-44629151 None:intergenic 25.0%
! ATGAAGAAGAATATTGGATT+TGG - chr2_4:44629240-44629259 None:intergenic 25.0%
! AAGAGAATGAAGAAGAATAT+TGG - chr2_4:44629246-44629265 None:intergenic 25.0%
! CATCAAAAATATGAACTTGA+AGG - chr2_4:44629394-44629413 None:intergenic 25.0%
!!! CTTCAAGTTCATATTTTTGA+TGG + chr2_4:44629392-44629411 Msa0330340:five_prime_UTR 25.0%
! AGGATAAATCACTTCAATAA+AGG - chr2_4:44629427-44629446 None:intergenic 25.0%
! TTGAAGTGATTTATCCTAAA+CGG + chr2_4:44629430-44629449 Msa0330340:five_prime_UTR 25.0%
!!! ATAGTGTTAGATTTTTCAGT+AGG + chr2_4:44629471-44629490 Msa0330340:five_prime_UTR 25.0%
!!! TAGTGTTAGATTTTTCAGTA+GGG + chr2_4:44629472-44629491 Msa0330340:five_prime_UTR 25.0%
!! ACATTGTGTTTTGTGAAAAA+GGG + chr2_4:44629523-44629542 Msa0330340:five_prime_UTR 25.0%
!!! CTTTGTGTTGTTTTGTTTTT+AGG + chr2_4:44629557-44629576 Msa0330340:five_prime_UTR 25.0%
!! TTTTAGGCTTTTATGAATAG+TGG + chr2_4:44629573-44629592 Msa0330340:five_prime_UTR 25.0%
! GATCAAGGTTATTTATTTGA+TGG + chr2_4:44629825-44629844 Msa0330340:five_prime_UTR 25.0%
!!! ATTATCGTTGATTTTTTGGA+AGG + chr2_4:44630171-44630190 Msa0330340:CDS 25.0%
! TTTCAGTCTTTCATTAAGTT+TGG + chr2_4:44630211-44630230 Msa0330340:CDS 25.0%
! AGTAAGAACAAAAATTCAGA+CGG - chr2_4:44630341-44630360 None:intergenic 25.0%
!! CTGAATTTTTGTTCTTACTT+TGG + chr2_4:44630342-44630361 Msa0330340:intron 25.0%
!!! ATATTCTAGAATGACCAATA+AGG - chr2_4:44630483-44630502 None:intergenic 25.0%
!! TTACTCTCCTAAATTTTGAA+GGG - chr2_4:44630638-44630657 None:intergenic 25.0%
!! ATTACTCTCCTAAATTTTGA+AGG - chr2_4:44630639-44630658 None:intergenic 25.0%
! TTCAAAATTTAGGAGAGTAA+TGG + chr2_4:44630638-44630657 Msa0330340:intron 25.0%
!!! CATTGAGTTCTAATTTTAGT+CGG + chr2_4:44630732-44630751 Msa0330340:intron 25.0%
!!! TTTTTGCTATCCTTATTTTG+TGG + chr2_4:44631029-44631048 Msa0330340:CDS 25.0%
!!! ATGATGCTTTTATTGTTGTT+TGG + chr2_4:44631100-44631119 Msa0330340:intron 25.0%
!!! TGATGCTTTTATTGTTGTTT+GGG + chr2_4:44631101-44631120 Msa0330340:intron 25.0%
! TAAAATCCACAAACTCAAAA+TGG - chr2_4:44631566-44631585 None:intergenic 25.0%
!!! TTTTGAGTTTGTGGATTTTA+AGG + chr2_4:44631566-44631585 Msa0330340:intron 25.0%
! AATAATCATGCAACAGAAAA+AGG - chr2_4:44631703-44631722 None:intergenic 25.0%
!!! TTCTGATTTGTATTTTAAGC+AGG + chr2_4:44631783-44631802 Msa0330340:CDS 25.0%
! AAAAGTAAAAAATCCTACCT+AGG - chr2_4:44631861-44631880 None:intergenic 25.0%
! AAACAAAATTTCAGGATTGT+AGG - chr2_4:44632360-44632379 None:intergenic 25.0%
! TGATTGACAAACAAAATTTC+AGG - chr2_4:44632368-44632387 None:intergenic 25.0%
! TATTCTGTTCAAGTAAAAGT+GGG + chr2_4:44632459-44632478 Msa0330340:CDS 25.0%
!! TTTTGAATTTTCTGCTTCAA+TGG + chr2_4:44632532-44632551 Msa0330340:CDS 25.0%
!! TGATAAGCAGAAAGAAATTT+TGG + chr2_4:44632725-44632744 Msa0330340:CDS 25.0%
! ATTCAATTGATGAAATGAGA+AGG + chr2_4:44632775-44632794 Msa0330340:CDS 25.0%
!! ATTTTTGACCTATAGTAATG+TGG + chr2_4:44633003-44633022 Msa0330340:intron 25.0%
! AGTTAATACCACATTACTAT+AGG - chr2_4:44633014-44633033 None:intergenic 25.0%
!! TATTAACTAGCTGACTTAAT+GGG + chr2_4:44633026-44633045 Msa0330340:intron 25.0%
!!! TACTGTTCAAGTTTTTAAGA+AGG - chr2_4:44633151-44633170 None:intergenic 25.0%
!! TGTTATCATTTTCATCATGT+AGG + chr2_4:44633256-44633275 Msa0330340:intron 25.0%
! ATTAAGAAAAGAAGAATCCA+TGG + chr2_4:44633546-44633565 Msa0330340:CDS 25.0%
! TGGAATTTACAAGAATATGT+CGG - chr2_4:44633641-44633660 None:intergenic 25.0%
!! TTCTTTTGCATTGTAATGAA+CGG - chr2_4:44633754-44633773 None:intergenic 25.0%
! TTGTTCAAAAGGTAAATGAA+GGG - chr2_4:44633781-44633800 None:intergenic 25.0%
! ATTGTTCAAAAGGTAAATGA+AGG - chr2_4:44633782-44633801 None:intergenic 25.0%
!! TACTCTACAAGCAATATTTT+TGG + chr2_4:44634294-44634313 Msa0330340:intron 25.0%
!!! TACAAAGTATTGTCAAATAG+CGG + chr2_4:44634428-44634447 Msa0330340:intron 25.0%
! TGAAATGTGGTAAAGAAAAT+TGG - chr2_4:44635123-44635142 None:intergenic 25.0%
! ATAAGAACAGAGATACAATA+AGG - chr2_4:44635269-44635288 None:intergenic 25.0%
! TGTATCTCTGTTCTTATATT+AGG + chr2_4:44635272-44635291 Msa0330340:three_prime_UTR 25.0%
GGATTGAACAATGAAAACTT+TGG - chr2_4:44629219-44629238 None:intergenic 30.0%
AAATGAAGAATGAGGAAAAG+GGG - chr2_4:44629282-44629301 None:intergenic 30.0%
GAAATGAAGAATGAGGAAAA+GGG - chr2_4:44629283-44629302 None:intergenic 30.0%
AGAAATGAAGAATGAGGAAA+AGG - chr2_4:44629284-44629303 None:intergenic 30.0%
GAAGATCAAGATTGAAACTT+TGG - chr2_4:44629310-44629329 None:intergenic 30.0%
ACCCTAAAATCTGATTGAAA+GGG - chr2_4:44629351-44629370 None:intergenic 30.0%
AACCCTAAAATCTGATTGAA+AGG - chr2_4:44629352-44629371 None:intergenic 30.0%
! TTAGGGTTTTTCACTGTAAA+AGG + chr2_4:44629364-44629383 Msa0330340:five_prime_UTR 30.0%
! TAGGGTTTTTCACTGTAAAA+GGG + chr2_4:44629365-44629384 Msa0330340:five_prime_UTR 30.0%
TGAAGTGATTTATCCTAAAC+GGG + chr2_4:44629431-44629450 Msa0330340:five_prime_UTR 30.0%
ATTTATCCTAAACGGGTAAA+AGG + chr2_4:44629438-44629457 Msa0330340:five_prime_UTR 30.0%
TTTATCCTAAACGGGTAAAA+GGG + chr2_4:44629439-44629458 Msa0330340:five_prime_UTR 30.0%
! GACATTGTGTTTTGTGAAAA+AGG + chr2_4:44629522-44629541 Msa0330340:five_prime_UTR 30.0%
!!! ATGAATAGTGGTTGCTTTTT+TGG + chr2_4:44629585-44629604 Msa0330340:five_prime_UTR 30.0%
!!! GCTTTTTTGGAAGCTTATTT+CGG + chr2_4:44629598-44629617 Msa0330340:five_prime_UTR 30.0%
!! TTGAATGTGAGAGTATTTAG+TGG + chr2_4:44629643-44629662 Msa0330340:five_prime_UTR 30.0%
AAAGAGAGAAAGAGGTAAAA+TGG - chr2_4:44629701-44629720 None:intergenic 30.0%
!!! TTACCTCTTTCTCTCTTTTT+TGG + chr2_4:44629703-44629722 Msa0330340:five_prime_UTR 30.0%
AATCCAAAAAAGAGAGAAAG+AGG - chr2_4:44629709-44629728 None:intergenic 30.0%
TTAATTTATGATGTCGGAGT+AGG + chr2_4:44629771-44629790 Msa0330340:five_prime_UTR 30.0%
!! GTGAAATTTGTTGTAGATCA+AGG + chr2_4:44629810-44629829 Msa0330340:five_prime_UTR 30.0%
TGATGATTTAGCATCACAAA+AGG + chr2_4:44629855-44629874 Msa0330340:five_prime_UTR 30.0%
GATGATTTAGCATCACAAAA+GGG + chr2_4:44629856-44629875 Msa0330340:five_prime_UTR 30.0%
!!! TAGTTTTAGTCTTAGTAGTG+AGG + chr2_4:44629928-44629947 Msa0330340:five_prime_UTR 30.0%
ACTTTCATCAAGTTTGTAAG+TGG + chr2_4:44629955-44629974 Msa0330340:five_prime_UTR 30.0%
AAACTGCGATGTTTATTGAA+CGG + chr2_4:44630098-44630117 Msa0330340:CDS 30.0%
GTAAGAACAAAAATTCAGAC+GGG - chr2_4:44630340-44630359 None:intergenic 30.0%
! GCTTTAAGCTTATCATTCAA+TGG + chr2_4:44630436-44630455 Msa0330340:intron 30.0%
!! GGTCATTCTAGAATATAAAG+TGG + chr2_4:44630487-44630506 Msa0330340:intron 30.0%
! AAATTTAGGAGAGTAATGGA+TGG + chr2_4:44630642-44630661 Msa0330340:intron 30.0%
ACAGTTCAATTGAATGTTTC+AGG + chr2_4:44630946-44630965 Msa0330340:intron 30.0%
GTATACAATACAAAAGACGA+CGG - chr2_4:44631187-44631206 None:intergenic 30.0%
AAATCAGAACTAATCTGAAC+TGG - chr2_4:44631772-44631791 None:intergenic 30.0%
TTGCTACCACTTCATTATAT+TGG + chr2_4:44631970-44631989 Msa0330340:intron 30.0%
! GGATTTTGTCTTGAGTATAT+GGG + chr2_4:44632212-44632231 Msa0330340:intron 30.0%
AACAGAATACATAGCATATG+CGG - chr2_4:44632448-44632467 None:intergenic 30.0%
GTATTCTGTTCAAGTAAAAG+TGG + chr2_4:44632458-44632477 Msa0330340:CDS 30.0%
TGAAAGAAATGCAAGGTTTA+TGG - chr2_4:44632505-44632524 None:intergenic 30.0%
! TGTCATTTGAAAGAAATGCA+AGG - chr2_4:44632512-44632531 None:intergenic 30.0%
!!! CAGTTTTGAAAAAGGAATAC+CGG + chr2_4:44632862-44632881 Msa0330340:CDS 30.0%
! TAACGATGAATACCTTTTTC+CGG - chr2_4:44632884-44632903 None:intergenic 30.0%
! GTATTAACTAGCTGACTTAA+TGG + chr2_4:44633025-44633044 Msa0330340:intron 30.0%
TGATGAAAATGATAACAAGC+TGG - chr2_4:44633253-44633272 None:intergenic 30.0%
GTGCATCCTGATAAAAATAT+GGG + chr2_4:44633287-44633306 Msa0330340:CDS 30.0%
AAGTTTCATCCTTGTTAAAG+AGG - chr2_4:44633481-44633500 None:intergenic 30.0%
!! AAAAAAAGGTACTCTATTGC+AGG + chr2_4:44633807-44633826 Msa0330340:intron 30.0%
GAAATTAAGAGAAAGAAGGA+AGG - chr2_4:44633983-44634002 None:intergenic 30.0%
GCATGAAATTAAGAGAAAGA+AGG - chr2_4:44633987-44634006 None:intergenic 30.0%
TCAATGCAAATCCAATCAAA+TGG - chr2_4:44634575-44634594 None:intergenic 30.0%
ATGAAATAAAGTAGGTTGTC+AGG - chr2_4:44634640-44634659 None:intergenic 30.0%
! AACCTACTTTATTTCATGCA+GGG + chr2_4:44634643-44634662 Msa0330340:intron 30.0%
!!! TTCTTTTGAGGCAATTTGAA+TGG - chr2_4:44634883-44634902 None:intergenic 30.0%
TTCAAATTGCCTCAAAAGAA+AGG + chr2_4:44634883-44634902 Msa0330340:CDS 30.0%
TCAAATTGCCTCAAAAGAAA+GGG + chr2_4:44634884-44634903 Msa0330340:CDS 30.0%
AAAAGAAAGGGAAAAAGCAA+TGG + chr2_4:44634896-44634915 Msa0330340:CDS 30.0%
TTTGTTTAAGAAACCCGAAA+TGG + chr2_4:44635004-44635023 Msa0330340:three_prime_UTR 30.0%
TTGATCTCAGTAATCCATTT+CGG - chr2_4:44635021-44635040 None:intergenic 30.0%
TTACTGAGATCAAAACTAGA+AGG + chr2_4:44635028-44635047 Msa0330340:three_prime_UTR 30.0%
! TATCAAAAGTGCAAAAACCT+AGG + chr2_4:44635170-44635189 Msa0330340:three_prime_UTR 30.0%
! ATCAAAAGTGCAAAAACCTA+GGG + chr2_4:44635171-44635190 Msa0330340:three_prime_UTR 30.0%
GTTACTCACATTGATCATTA+AGG + chr2_4:44635202-44635221 Msa0330340:three_prime_UTR 30.0%
!!! TTAGAAAGTGCTCTTTTCAA+TGG + chr2_4:44635297-44635316 Msa0330340:three_prime_UTR 30.0%
! TGGTTACTAAGGATTTCTTT+TGG + chr2_4:44635317-44635336 Msa0330340:three_prime_UTR 30.0%
! TTTTGTAAAGAGAGGAGTGA+GGG - chr2_4:44629124-44629143 None:intergenic 35.0%
! TTGAAAGGGGGTATGAAATT+GGG - chr2_4:44629337-44629356 None:intergenic 35.0%
! ATTGAAAGGGGGTATGAAAT+TGG - chr2_4:44629338-44629357 None:intergenic 35.0%
CCTAAAATCTGATTGAAAGG+GGG - chr2_4:44629349-44629368 None:intergenic 35.0%
CCCTAAAATCTGATTGAAAG+GGG - chr2_4:44629350-44629369 None:intergenic 35.0%
! CCCCTTTCAATCAGATTTTA+GGG + chr2_4:44629347-44629366 Msa0330340:five_prime_UTR 35.0%
! TGTGTTTTGTGAAAAAGGGA+TGG + chr2_4:44629527-44629546 Msa0330340:five_prime_UTR 35.0%
!! GAGAGTATTTAGTGGTATCA+TGG + chr2_4:44629651-44629670 Msa0330340:five_prime_UTR 35.0%
CAAAAGGGTCATTGGATTTA+TGG + chr2_4:44629871-44629890 Msa0330340:five_prime_UTR 35.0%
TTTGTAAGTGGAATCTGTAG+AGG + chr2_4:44629967-44629986 Msa0330340:five_prime_UTR 35.0%
TAGGGTTGTTCAATCAAGTT+TGG + chr2_4:44630008-44630027 Msa0330340:CDS 35.0%
AGGGTTGTTCAATCAAGTTT+GGG + chr2_4:44630009-44630028 Msa0330340:CDS 35.0%
TGATGCTCTTGCTTATAATG+TGG + chr2_4:44630239-44630258 Msa0330340:CDS 35.0%
TGTGAGAAGCAATGTATTCT+TGG - chr2_4:44630929-44630948 None:intergenic 35.0%
AATACTTGGGTTATACTCCT+GGG + chr2_4:44630990-44631009 Msa0330340:CDS 35.0%
TGGCATACATCCACAAAATA+AGG - chr2_4:44631042-44631061 None:intergenic 35.0%
TAATCCTGTGATCAGAAAGT+TGG - chr2_4:44631062-44631081 None:intergenic 35.0%
ACAGGATTACTACTCATAGT+TGG + chr2_4:44631073-44631092 Msa0330340:CDS 35.0%
TAGTGACCATAAAAGAAGAG+AGG + chr2_4:44631144-44631163 Msa0330340:intron 35.0%
! GCATATCCTCTCTTCTTTTA+TGG - chr2_4:44631153-44631172 None:intergenic 35.0%
AAAGACGACGGATATACAAT+AGG - chr2_4:44631175-44631194 None:intergenic 35.0%
ACTCCACTATCAAAATTGTG+AGG + chr2_4:44631207-44631226 Msa0330340:intron 35.0%
ATCTCATAGGTAATCCAACA+CGG - chr2_4:44631274-44631293 None:intergenic 35.0%
TGTTGGATTACCTATGAGAT+CGG + chr2_4:44631274-44631293 Msa0330340:intron 35.0%
AAATCCTACCTAGGATAATG+AGG - chr2_4:44631852-44631871 None:intergenic 35.0%
CAACGACCAATATAATGAAG+TGG - chr2_4:44631979-44631998 None:intergenic 35.0%
AAATAGAAGCTAAGCCTCTT+TGG - chr2_4:44632032-44632051 None:intergenic 35.0%
! GGGATTTTGTCTTGAGTATA+TGG + chr2_4:44632211-44632230 Msa0330340:intron 35.0%
! AGTACACAAGAAAGGCATAT+GGG - chr2_4:44632243-44632262 None:intergenic 35.0%
! TAGTACACAAGAAAGGCATA+TGG - chr2_4:44632244-44632263 None:intergenic 35.0%
! AAGAGTGTAGTACACAAGAA+AGG - chr2_4:44632251-44632270 None:intergenic 35.0%
AGAAGTGAGAACACTGTAAT+GGG - chr2_4:44632315-44632334 None:intergenic 35.0%
AATTCTCAGATTCAACTGGT+GGG - chr2_4:44632653-44632672 None:intergenic 35.0%
AAATTCTCAGATTCAACTGG+TGG - chr2_4:44632654-44632673 None:intergenic 35.0%
TGCAAATTCTCAGATTCAAC+TGG - chr2_4:44632657-44632676 None:intergenic 35.0%
! TGTCTGCTCTTTTACAACTT+TGG - chr2_4:44632754-44632773 None:intergenic 35.0%
CTTAATCATTATGATGCCCT+TGG + chr2_4:44632810-44632829 Msa0330340:CDS 35.0%
GAAAAAGGAATACCGGAAAA+AGG + chr2_4:44632869-44632888 Msa0330340:CDS 35.0%
ATATTTAGCGCAACATTGCA+AGG - chr2_4:44632985-44633004 None:intergenic 35.0%
CGTGCATCCTGATAAAAATA+TGG + chr2_4:44633286-44633305 Msa0330340:CDS 35.0%
!! GAACTGCCCATATTTTTATC+AGG - chr2_4:44633296-44633315 None:intergenic 35.0%
GAAACTTCAATGTGCATATG+AGG + chr2_4:44633337-44633356 Msa0330340:CDS 35.0%
! CACTGTTTTCCTCTTTAACA+AGG + chr2_4:44633469-44633488 Msa0330340:intron 35.0%
TTAACAAGGATGAAACTTCC+AGG + chr2_4:44633483-44633502 Msa0330340:intron 35.0%
CTTATGATTCTTCAAACTCG+TGG - chr2_4:44633661-44633680 None:intergenic 35.0%
TGCATTGTAATGAACGGATA+TGG - chr2_4:44633748-44633767 None:intergenic 35.0%
TCCTGAATTTACATCTTCTC+TGG + chr2_4:44634021-44634040 Msa0330340:intron 35.0%
TCCAGAGAAGATGTAAATTC+AGG - chr2_4:44634025-44634044 None:intergenic 35.0%
!! AGATGGATGGGTTGAATATA+AGG + chr2_4:44634082-44634101 Msa0330340:CDS 35.0%
!! GATGGATGGGTTGAATATAA+GGG + chr2_4:44634083-44634102 Msa0330340:CDS 35.0%
GGTTGAATATAAGGGATCTT+TGG + chr2_4:44634091-44634110 Msa0330340:CDS 35.0%
GCTTTGATCTTGTCTTTCAT+AGG + chr2_4:44634193-44634212 Msa0330340:intron 35.0%
TGATCAGTGTTGTCAAATAG+CGG + chr2_4:44634338-44634357 Msa0330340:intron 35.0%
! CAACCTACTTTATTTCATGC+AGG + chr2_4:44634642-44634661 Msa0330340:intron 35.0%
TTCCCTGCATGAAATAAAGT+AGG - chr2_4:44634648-44634667 None:intergenic 35.0%
! ACTTTATTTCATGCAGGGAA+TGG + chr2_4:44634648-44634667 Msa0330340:intron 35.0%
ATCTACTTGAGTTACAGGAA+TGG - chr2_4:44634735-44634754 None:intergenic 35.0%
TAACTCAAGTAGATTCCCAT+GGG + chr2_4:44634741-44634760 Msa0330340:CDS 35.0%
GTCTTCATCCATCATCATTT+CGG - chr2_4:44634776-44634795 None:intergenic 35.0%
!!! TGCTTTTTCCCTTTCTTTTG+AGG - chr2_4:44634895-44634914 None:intergenic 35.0%
TCTTGCTGAAAAGCTCAATA+GGG + chr2_4:44634928-44634947 Msa0330340:exon 35.0%
TGATCTCAGTAATCCATTTC+GGG - chr2_4:44635020-44635039 None:intergenic 35.0%
GTAAAGAAAATTGGCAACCT+TGG - chr2_4:44635114-44635133 None:intergenic 35.0%
! GCTCTTTTCAATGGTTACTA+AGG + chr2_4:44635306-44635325 Msa0330340:three_prime_UTR 35.0%
! GTTTTGTAAAGAGAGGAGTG+AGG - chr2_4:44629125-44629144 None:intergenic 40.0%
GAGGAAAAGGGGTTTCAAAA+GGG - chr2_4:44629271-44629290 None:intergenic 40.0%
TGAGGAAAAGGGGTTTCAAA+AGG - chr2_4:44629272-44629291 None:intergenic 40.0%
TGGAGCAGAAATGAAGAATG+AGG - chr2_4:44629290-44629309 None:intergenic 40.0%
! CCCCCTTTCAATCAGATTTT+AGG + chr2_4:44629346-44629365 Msa0330340:five_prime_UTR 40.0%
TAGGGTCGTTGAAAAAGTAG+AGG + chr2_4:44629490-44629509 Msa0330340:five_prime_UTR 40.0%
TAGCATCACAAAAGGGTCAT+TGG + chr2_4:44629863-44629882 Msa0330340:five_prime_UTR 40.0%
GGTCATTGGATTTATGGTGA+TGG + chr2_4:44629877-44629896 Msa0330340:five_prime_UTR 40.0%
!! TCATGGTGATGGAGGATATA+GGG + chr2_4:44629990-44630009 Msa0330340:exon 40.0%
GGGTTGTTCAATCAAGTTTG+GGG + chr2_4:44630010-44630029 Msa0330340:CDS 40.0%
TGTTCAATCAAGTTTGGGGA+TGG + chr2_4:44630014-44630033 Msa0330340:CDS 40.0%
CGATGTTTATTGAACGGCAT+TGG + chr2_4:44630104-44630123 Msa0330340:CDS 40.0%
TCTGACTTCGATGTATTGCT+TGG + chr2_4:44630276-44630295 Msa0330340:CDS 40.0%
! GGTTTACGTGCTTGTTAGTA+TGG + chr2_4:44630297-44630316 Msa0330340:CDS 40.0%
!! TGAATGTTTCAGGTTACTGC+TGG + chr2_4:44630956-44630975 Msa0330340:intron 40.0%
!! GAATGTTTCAGGTTACTGCT+GGG + chr2_4:44630957-44630976 Msa0330340:intron 40.0%
!! AATGTTTCAGGTTACTGCTG+GGG + chr2_4:44630958-44630977 Msa0330340:intron 40.0%
! CAGGAGTATAACCCAAGTAT+TGG - chr2_4:44630991-44631010 None:intergenic 40.0%
CAATACTTGGGTTATACTCC+TGG + chr2_4:44630989-44631008 Msa0330340:CDS 40.0%
TATGCCAACTTTCTGATCAC+AGG + chr2_4:44631055-44631074 Msa0330340:CDS 40.0%
GGATTACTACTCATAGTTGG+AGG + chr2_4:44631076-44631095 Msa0330340:CDS 40.0%
!! GTGCCTCACAATTTTGATAG+TGG - chr2_4:44631213-44631232 None:intergenic 40.0%
AGGTAATCCAACACGGTTTA+GGG - chr2_4:44631267-44631286 None:intergenic 40.0%
TAGGTAATCCAACACGGTTT+AGG - chr2_4:44631268-44631287 None:intergenic 40.0%
GTTGGATTACCTATGAGATC+GGG + chr2_4:44631275-44631294 Msa0330340:intron 40.0%
AACTCAAAATGGTGCTCATC+AGG - chr2_4:44631555-44631574 None:intergenic 40.0%
!!! TGAGCACCATTTTGAGTTTG+TGG + chr2_4:44631557-44631576 Msa0330340:intron 40.0%
!!! GTGGATTTTAAGGCTCTAGA+TGG + chr2_4:44631576-44631595 Msa0330340:intron 40.0%
AGGAGGAAAGCTTGTAACTT+AGG - chr2_4:44631832-44631851 None:intergenic 40.0%
GAGAAGTGAGAACACTGTAA+TGG - chr2_4:44632316-44632335 None:intergenic 40.0%
TGTTTGTCAATCACGAATGC+AGG + chr2_4:44632375-44632394 Msa0330340:intron 40.0%
CTGTTCAAGTAAAAGTGGGA+TGG + chr2_4:44632463-44632482 Msa0330340:CDS 40.0%
GAAATGCAAGGTTTATGGCA+AGG - chr2_4:44632500-44632519 None:intergenic 40.0%
CTGCTTATCAACAACTGATG+TGG - chr2_4:44632715-44632734 None:intergenic 40.0%
!!! CGATGCAGCAGTTTTGAAAA+AGG + chr2_4:44632854-44632873 Msa0330340:CDS 40.0%
! TAACTAGCTGACTTAATGGG+TGG + chr2_4:44633029-44633048 Msa0330340:intron 40.0%
GTTCTGTCTAAAAACTGCAG+AGG + chr2_4:44633364-44633383 Msa0330340:intron 40.0%
AGTGCGGTAATTCACATGTT+TGG + chr2_4:44633878-44633897 Msa0330340:CDS 40.0%
GTGCGGTAATTCACATGTTT+GGG + chr2_4:44633879-44633898 Msa0330340:CDS 40.0%
! TTTACATCTTCTCTGGAAGC+AGG + chr2_4:44634028-44634047 Msa0330340:intron 40.0%
CTGTCAGTTTCATCAAGCAA+AGG + chr2_4:44634055-44634074 Msa0330340:CDS 40.0%
CAGTTTCATCAAGCAAAGGA+TGG + chr2_4:44634059-44634078 Msa0330340:CDS 40.0%
!!! AGGGATCTTTGGTTTTTGAC+AGG + chr2_4:44634102-44634121 Msa0330340:CDS 40.0%
!! ATCAGAATGGGCTATATGTC+AGG + chr2_4:44634265-44634284 Msa0330340:intron 40.0%
GCTATTTGACAACACTGATC+AGG - chr2_4:44634339-44634358 None:intergenic 40.0%
TAGCGGCTATATAAACGCTA+TGG + chr2_4:44634445-44634464 Msa0330340:intron 40.0%
TGTTGTCAATCTCAGATCGT+GGG - chr2_4:44634510-44634529 None:intergenic 40.0%
AGTAGACTGAGTACCAAATC+AGG - chr2_4:44634538-44634557 None:intergenic 40.0%
ATCAAATGGAACACTGTCTC+TGG - chr2_4:44634561-44634580 None:intergenic 40.0%
GAGACAGTGTTCCATTTGAT+TGG + chr2_4:44634561-44634580 Msa0330340:intron 40.0%
ACCATGTTTACATGGAAGCT+CGG - chr2_4:44634697-44634716 None:intergenic 40.0%
AGCTTCCATGTAAACATGGT+TGG + chr2_4:44634697-44634716 Msa0330340:CDS 40.0%
TGGGAATCTACTTGAGTTAC+AGG - chr2_4:44634740-44634759 None:intergenic 40.0%
GTAACTCAAGTAGATTCCCA+TGG + chr2_4:44634740-44634759 Msa0330340:CDS 40.0%
AAGTAGATTCCCATGGGATT+TGG + chr2_4:44634747-44634766 Msa0330340:CDS 40.0%
GTCTTGCTGAAAAGCTCAAT+AGG + chr2_4:44634927-44634946 Msa0330340:exon 40.0%
TTTCATTGCCTACATCCCAA+AGG + chr2_4:44634962-44634981 Msa0330340:three_prime_UTR 40.0%
TTCATTGCCTACATCCCAAA+GGG + chr2_4:44634963-44634982 Msa0330340:three_prime_UTR 40.0%
TTACTCCATCCAATCCCTTT+GGG - chr2_4:44634980-44634999 None:intergenic 40.0%
TTTACTCCATCCAATCCCTT+TGG - chr2_4:44634981-44635000 None:intergenic 40.0%
GTGGTGAATTATAAGAGCCA+AGG + chr2_4:44635094-44635113 Msa0330340:three_prime_UTR 40.0%
GTGCAAAAACCTAGGGTTAT+AGG + chr2_4:44635178-44635197 Msa0330340:three_prime_UTR 40.0%
TGAGTAACTCCTATAACCCT+AGG - chr2_4:44635190-44635209 None:intergenic 40.0%
TTTCAGAACTGAGCATGAGT+CGG + chr2_4:44635226-44635245 Msa0330340:three_prime_UTR 40.0%
! CTTGACCCTTTTACCCGTTT+AGG - chr2_4:44629447-44629466 None:intergenic 45.0%
CTAAACGGGTAAAAGGGTCA+AGG + chr2_4:44629445-44629464 Msa0330340:five_prime_UTR 45.0%
AGTGGAATCTGTAGAGGTCA+TGG + chr2_4:44629973-44629992 Msa0330340:exon 45.0%
ATCTGTAGAGGTCATGGTGA+TGG + chr2_4:44629979-44629998 Msa0330340:exon 45.0%
!! GTCATGGTGATGGAGGATAT+AGG + chr2_4:44629989-44630008 Msa0330340:exon 45.0%
ATCAAGTTTGGGGATGGCTT+CGG + chr2_4:44630020-44630039 Msa0330340:CDS 45.0%
TTTGGAAGGACTCTGCTGTA+AGG + chr2_4:44630185-44630204 Msa0330340:CDS 45.0%
TTGGAAGGACTCTGCTGTAA+GGG + chr2_4:44630186-44630205 Msa0330340:CDS 45.0%
GACGCTGCCCTTCAAAATTT+AGG + chr2_4:44630628-44630647 Msa0330340:intron 45.0%
! ACTCCTGGGCTTTTTATCGT+AGG + chr2_4:44631004-44631023 Msa0330340:CDS 45.0%
! CTCCTGGGCTTTTTATCGTA+GGG + chr2_4:44631005-44631024 Msa0330340:CDS 45.0%
! TTTTTGCCCCTAAACCGTGT+TGG + chr2_4:44631257-44631276 Msa0330340:intron 45.0%
GGTAATCCAACACGGTTTAG+GGG - chr2_4:44631266-44631285 None:intergenic 45.0%
TGTTTAAGCTCAGCTTGCCA+AGG - chr2_4:44631362-44631381 None:intergenic 45.0%
CACGACGTGATGTAAGTGTA+TGG - chr2_4:44631438-44631457 None:intergenic 45.0%
TACACTTACATCACGTCGTG+TGG + chr2_4:44631438-44631457 Msa0330340:intron 45.0%
TGACCTTCTTTCCCTTTGCT+TGG + chr2_4:44631516-44631535 Msa0330340:intron 45.0%
GCTTTCCTCCTCATTATCCT+AGG + chr2_4:44631841-44631860 Msa0330340:CDS 45.0%
TCCTCCTCATTATCCTAGGT+AGG + chr2_4:44631845-44631864 Msa0330340:intron 45.0%
TCCTACCTAGGATAATGAGG+AGG - chr2_4:44631849-44631868 None:intergenic 45.0%
AAGCTAAGCCTCTTTGGTTG+GGG - chr2_4:44632026-44632045 None:intergenic 45.0%
GAAGCTAAGCCTCTTTGGTT+GGG - chr2_4:44632027-44632046 None:intergenic 45.0%
AGAAGCTAAGCCTCTTTGGT+TGG - chr2_4:44632028-44632047 None:intergenic 45.0%
! GCACGCTTGGTGGTATTAAT+TGG + chr2_4:44632420-44632439 Msa0330340:CDS 45.0%
CAAGTAAAAGTGGGATGGCT+TGG + chr2_4:44632468-44632487 Msa0330340:CDS 45.0%
TCCTGAAGAGCAGAAGCAAT+CGG + chr2_4:44632581-44632600 Msa0330340:CDS 45.0%
GAAGCAATCGGAGACAGTTA+TGG + chr2_4:44632593-44632612 Msa0330340:CDS 45.0%
TCAGATTCAACTGGTGGGAT+AGG - chr2_4:44632648-44632667 None:intergenic 45.0%
TTTGTGGCGGCTAAATCCAA+GGG - chr2_4:44632829-44632848 None:intergenic 45.0%
! TTTTGTGGCGGCTAAATCCA+AGG - chr2_4:44632830-44632849 None:intergenic 45.0%
!! CTGCATCGATCTTTTTGTGG+CGG - chr2_4:44632842-44632861 None:intergenic 45.0%
!! CTGCTGCATCGATCTTTTTG+TGG - chr2_4:44632845-44632864 None:intergenic 45.0%
TTTAGCGCAACATTGCAAGG+TGG - chr2_4:44632982-44633001 None:intergenic 45.0%
! CTGACTTAATGGGTGGTGTT+TGG + chr2_4:44633036-44633055 Msa0330340:intron 45.0%
TCACAGAGTCAGAAAGAACC+TGG - chr2_4:44633504-44633523 None:intergenic 45.0%
TACCTGATGTGAACTGCTGT+GGG - chr2_4:44633593-44633612 None:intergenic 45.0%
TTACCTGATGTGAACTGCTG+TGG - chr2_4:44633594-44633613 None:intergenic 45.0%
ATCGTTCCGAAGAATCCAGA+CGG + chr2_4:44633842-44633861 Msa0330340:CDS 45.0%
CTGTATCCGTCTGGATTCTT+CGG - chr2_4:44633851-44633870 None:intergenic 45.0%
ATGTTTGGGTATGCACCAAC+AGG + chr2_4:44633893-44633912 Msa0330340:CDS 45.0%
CATCAAGCAAAGGATGGAGA+TGG + chr2_4:44634065-44634084 Msa0330340:CDS 45.0%
AAGCAAAGGATGGAGATGGA+TGG + chr2_4:44634069-44634088 Msa0330340:CDS 45.0%
AGCAAAGGATGGAGATGGAT+GGG + chr2_4:44634070-44634089 Msa0330340:CDS 45.0%
ATAGCAGTGCTACAACGTAG+CGG + chr2_4:44634363-44634382 Msa0330340:intron 45.0%
TCTCAGATCGTGGGAAATAG+CGG - chr2_4:44634501-44634520 None:intergenic 45.0%
GTGTTGTCAATCTCAGATCG+TGG - chr2_4:44634511-44634530 None:intergenic 45.0%
! CGATCTGAGATTGACAACAC+TGG + chr2_4:44634511-44634530 Msa0330340:intron 45.0%
TGACAACACTGGACCTGATT+TGG + chr2_4:44634522-44634541 Msa0330340:intron 45.0%
AGGTTGTCAGGTACAGAAAG+TGG - chr2_4:44634628-44634647 None:intergenic 45.0%
TGTTTACATGGAAGCTCGGT+CGG - chr2_4:44634693-44634712 None:intergenic 45.0%
ACCGAGCTTCCATGTAAACA+TGG + chr2_4:44634693-44634712 Msa0330340:CDS 45.0%
CCAAGCCAACCATGTTTACA+TGG - chr2_4:44634705-44634724 None:intergenic 45.0%
! CCATGTAAACATGGTTGGCT+TGG + chr2_4:44634702-44634721 Msa0330340:CDS 45.0%
TTTGGACGCCGAAATGATGA+TGG + chr2_4:44634765-44634784 Msa0330340:CDS 45.0%
!! GATGATGGATGAAGACGAAG+AGG + chr2_4:44634780-44634799 Msa0330340:CDS 45.0%
ATTTGACCTGTGGCTTCAAC+AGG + chr2_4:44634804-44634823 Msa0330340:CDS 45.0%
! CTTCAACAGGCTTTAGCATC+TGG + chr2_4:44634817-44634836 Msa0330340:CDS 45.0%
!! ATCCAATCCCTTTGGGATGT+AGG - chr2_4:44634973-44634992 None:intergenic 45.0%
TACATCCCAAAGGGATTGGA+TGG + chr2_4:44634972-44634991 Msa0330340:three_prime_UTR 45.0%
!! GATGAGTCATGAGAGCATTG+TGG + chr2_4:44635075-44635094 Msa0330340:three_prime_UTR 45.0%
!! TGTAGAGGTCATGGTGATGG+AGG + chr2_4:44629982-44630001 Msa0330340:exon 50.0%
GGTCACGAAAAGATGCCTGT+TGG + chr2_4:44630041-44630060 Msa0330340:CDS 50.0%
!! TATTGAACGGCATTGGCCGA+TGG + chr2_4:44630111-44630130 Msa0330340:CDS 50.0%
ATGCAGGGGTTGCTCGAAAT+TGG + chr2_4:44630135-44630154 Msa0330340:CDS 50.0%
TGCAGGGGTTGCTCGAAATT+GGG + chr2_4:44630136-44630155 Msa0330340:CDS 50.0%
TGGAAGGACTCTGCTGTAAG+GGG + chr2_4:44630187-44630206 Msa0330340:CDS 50.0%
TGGGGTTGCTGTCCAATACT+TGG + chr2_4:44630976-44630995 Msa0330340:CDS 50.0%
GGGGTTGCTGTCCAATACTT+GGG + chr2_4:44630977-44630996 Msa0330340:CDS 50.0%
AGCCCTACGATAAAAAGCCC+AGG - chr2_4:44631010-44631029 None:intergenic 50.0%
CTATGAGATCGGGAGCTGTT+GGG + chr2_4:44631285-44631304 Msa0330340:intron 50.0%
TCCAGGATCATTCGATGCGA+TGG - chr2_4:44631335-44631354 None:intergenic 50.0%
TTCTTCATCGTCACACCTCG+TGG + chr2_4:44631464-44631483 Msa0330340:intron 50.0%
CAAAGGGAAAGAAGGTCACG+CGG - chr2_4:44631514-44631533 None:intergenic 50.0%
GCACCAAGCAAAGGGAAAGA+AGG - chr2_4:44631522-44631541 None:intergenic 50.0%
ATACGACGGCACCAAGCAAA+GGG - chr2_4:44631530-44631549 None:intergenic 50.0%
GTGCTCATCAGGTGATACGA+CGG - chr2_4:44631544-44631563 None:intergenic 50.0%
TCCTACTCGAGACTGTAGCA+CGG - chr2_4:44631898-44631917 None:intergenic 50.0%
CTATTTCCCCCCAACCAAAG+AGG + chr2_4:44632015-44632034 Msa0330340:intron 50.0%
AGCTAAGCCTCTTTGGTTGG+GGG - chr2_4:44632025-44632044 None:intergenic 50.0%
CACCAAGCGTGCACGATTTA+GGG - chr2_4:44632412-44632431 None:intergenic 50.0%
TCCGATTGCTTCTGCTCTTC+AGG - chr2_4:44632585-44632604 None:intergenic 50.0%
ACAACTGATGTGGTGACAGC+AGG - chr2_4:44632705-44632724 None:intergenic 50.0%
GTGAACTGCTGTGGGATTTC+TGG - chr2_4:44633585-44633604 None:intergenic 50.0%
ATCCCACAGCAGTTCACATC+AGG + chr2_4:44633588-44633607 Msa0330340:CDS 50.0%
CTTTGTGCACTGTATCCGTC+TGG - chr2_4:44633860-44633879 None:intergenic 50.0%
CGGATACAGTGCACAAAGTG+CGG + chr2_4:44633862-44633881 Msa0330340:CDS 50.0%
GACCTGACACCATCTTGCTT+TGG - chr2_4:44633926-44633945 None:intergenic 50.0%
! CCGCACAAACAAAAGCACGT+GGG - chr2_4:44634226-44634245 None:intergenic 50.0%
!! CCCACGTGCTTTTGTTTGTG+CGG + chr2_4:44634223-44634242 Msa0330340:intron 50.0%
! TCCGCACAAACAAAAGCACG+TGG - chr2_4:44634227-44634246 None:intergenic 50.0%
! TCATGCAGGGAATGGCTTGT+AGG + chr2_4:44634656-44634675 Msa0330340:intron 50.0%
TTTCGGCGTCCAAATCCCAT+GGG - chr2_4:44634759-44634778 None:intergenic 50.0%
ATTTCGGCGTCCAAATCCCA+TGG - chr2_4:44634760-44634779 None:intergenic 50.0%
!! ACGAAGAGGCATTTGACCTG+TGG + chr2_4:44634794-44634813 Msa0330340:CDS 50.0%
CTAAAGCCTGTTGAAGCCAC+AGG - chr2_4:44634813-44634832 None:intergenic 50.0%
TTTGCGAGTCCTCAAAACGC+AGG + chr2_4:44634845-44634864 Msa0330340:CDS 50.0%
! CCAACTCTTCCTGCGTTTTG+AGG - chr2_4:44634857-44634876 None:intergenic 50.0%
CCTCAAAACGCAGGAAGAGT+TGG + chr2_4:44634854-44634873 Msa0330340:CDS 50.0%
TGCCTACATCCCAAAGGGAT+TGG + chr2_4:44634968-44634987 Msa0330340:three_prime_UTR 50.0%
! GCATTGGCCGATGGTATGCA+GGG + chr2_4:44630120-44630139 Msa0330340:CDS 55.0%
CATTGGCCGATGGTATGCAG+GGG + chr2_4:44630121-44630140 Msa0330340:CDS 55.0%
GAGCAACCCCTGCATACCAT+CGG - chr2_4:44630130-44630149 None:intergenic 55.0%
GCAGGGGTTGCTCGAAATTG+GGG + chr2_4:44630137-44630156 Msa0330340:CDS 55.0%
GGAAGGACTCTGCTGTAAGG+GGG + chr2_4:44630188-44630207 Msa0330340:CDS 55.0%
CCAACAGCTCCCGATCTCAT+AGG - chr2_4:44631287-44631306 None:intergenic 55.0%
CCTATGAGATCGGGAGCTGT+TGG + chr2_4:44631284-44631303 Msa0330340:intron 55.0%
GCCATCGCATCGAATGATCC+TGG + chr2_4:44631331-44631350 Msa0330340:intron 55.0%
GAATGATCCTGGACGAGCCT+TGG + chr2_4:44631342-44631361 Msa0330340:intron 55.0%
! AAACACCCCCCTTTTCCCTG+TGG + chr2_4:44631377-44631396 Msa0330340:intron 55.0%
GATACGACGGCACCAAGCAA+AGG - chr2_4:44631531-44631550 None:intergenic 55.0%
TCCGTGCTACAGTCTCGAGT+AGG + chr2_4:44631894-44631913 Msa0330340:intron 55.0%
GCTAAGCCTCTTTGGTTGGG+GGG - chr2_4:44632024-44632043 None:intergenic 55.0%
CTCCCTAAATCGTGCACGCT+TGG + chr2_4:44632407-44632426 Msa0330340:CDS 55.0%
CCACCAAGCGTGCACGATTT+AGG - chr2_4:44632413-44632432 None:intergenic 55.0%
CCTAAATCGTGCACGCTTGG+TGG + chr2_4:44632410-44632429 Msa0330340:CDS 55.0%
GGTGACAGCAGGTGGTTTAC+TGG - chr2_4:44632694-44632713 None:intergenic 55.0%
ACTGATGTGGTGACAGCAGG+TGG - chr2_4:44632702-44632721 None:intergenic 55.0%
! CTGGCACACGCTTTTAGCCA+TGG - chr2_4:44633566-44633585 None:intergenic 55.0%
GGTATGCACCAACAGGAGCA+AGG + chr2_4:44633900-44633919 Msa0330340:CDS 55.0%
!! TGCTTTGGCCTTGCTCCTGT+TGG - chr2_4:44633911-44633930 None:intergenic 55.0%
GGAGCAAGGCCAAAGCAAGA+TGG + chr2_4:44633914-44633933 Msa0330340:CDS 55.0%
GGCCAAAGCAAGATGGTGTC+AGG + chr2_4:44633921-44633940 Msa0330340:CDS 55.0%
!! TATGGTGCTGTAGCGCGTAG+TGG + chr2_4:44634463-44634482 Msa0330340:intron 55.0%
TACATGGAAGCTCGGTCGGT+GGG - chr2_4:44634689-44634708 None:intergenic 55.0%
TTACATGGAAGCTCGGTCGG+TGG - chr2_4:44634690-44634709 None:intergenic 55.0%
CACAGTTCGAGCACGCCAAC+AGG - chr2_4:44630059-44630078 None:intergenic 60.0%
CTGTTGGCGTGCTCGAACTG+TGG + chr2_4:44630057-44630076 Msa0330340:CDS 60.0%
!! GGCATTGGCCGATGGTATGC+AGG + chr2_4:44630119-44630138 Msa0330340:CDS 60.0%
!! TGGGGGTGCCACAGGGAAAA+GGG - chr2_4:44631388-44631407 None:intergenic 60.0%
AGAGTCTGCGCACAGAGGCA+GGG - chr2_4:44631414-44631433 None:intergenic 60.0%
ATGGCAGAGTCTGCGCACAG+AGG - chr2_4:44631419-44631438 None:intergenic 60.0%
AAGCTCGGTCGGTGGGTGTT+AGG - chr2_4:44634682-44634701 None:intergenic 60.0%
CAGCTTGCCAAGGCTCGTCC+AGG - chr2_4:44631352-44631371 None:intergenic 65.0%
! GGGTGCCACAGGGAAAAGGG+GGG - chr2_4:44631385-44631404 None:intergenic 65.0%
! GGGGTGCCACAGGGAAAAGG+GGG - chr2_4:44631386-44631405 None:intergenic 65.0%
!! GGGGGTGCCACAGGGAAAAG+GGG - chr2_4:44631387-44631406 None:intergenic 65.0%
!! CTGGGGGTGCCACAGGGAAA+AGG - chr2_4:44631389-44631408 None:intergenic 65.0%
! CTTTTCCCTGTGGCACCCCC+AGG + chr2_4:44631387-44631406 Msa0330340:intron 65.0%
GAGTCTGCGCACAGAGGCAG+GGG - chr2_4:44631413-44631432 None:intergenic 65.0%
CAGAGTCTGCGCACAGAGGC+AGG - chr2_4:44631415-44631434 None:intergenic 65.0%
CACCTCGTGGCCAATCCCTC+CGG + chr2_4:44631477-44631496 Msa0330340:intron 65.0%
CTAGAGTCCGCCGGAGGGAT+TGG - chr2_4:44631490-44631509 None:intergenic 65.0%
! CAATCCCTCCGGCGGACTCT+AGG + chr2_4:44631488-44631507 Msa0330340:intron 65.0%
CTCGTGGCCAATCCCTCCGG+CGG + chr2_4:44631480-44631499 Msa0330340:intron 70.0%
TCACGCGGCCTAGAGTCCGC+CGG - chr2_4:44631499-44631518 None:intergenic 70.0%
!! AGGGGCCTGGGGGTGCCACA+GGG - chr2_4:44631395-44631414 None:intergenic 75.0%
GCACAGAGGCAGGGGCCTGG+GGG - chr2_4:44631405-44631424 None:intergenic 75.0%
CGCACAGAGGCAGGGGCCTG+GGG - chr2_4:44631406-44631425 None:intergenic 75.0%
GCGCACAGAGGCAGGGGCCT+GGG - chr2_4:44631407-44631426 None:intergenic 75.0%
TGCGCACAGAGGCAGGGGCC+TGG - chr2_4:44631408-44631427 None:intergenic 75.0%
!! CGCCGGAGGGATTGGCCACG+AGG - chr2_4:44631482-44631501 None:intergenic 75.0%
GCGGCCTAGAGTCCGCCGGA+GGG - chr2_4:44631495-44631514 None:intergenic 75.0%
!!! CAGGGGCCTGGGGGTGCCAC+AGG - chr2_4:44631396-44631415 None:intergenic 80.0%
! CGCGGCCTAGAGTCCGCCGG+AGG - chr2_4:44631496-44631515 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 44629102 44635419 44629102 ID=Msa0330340;Name=Msa0330340
chr2_4 mRNA 44629102 44635419 44629102 ID=Msa0330340-mRNA-1;Parent=Msa0330340;Name=Msa0330340-mRNA-1;_AED=0.11;_eAED=0.11;_QI=890|0.62|0.88|0.88|1|1|9|483|565
chr2_4 exon 44629102 44630318 44629102 ID=Msa0330340-mRNA-1:exon:13644;Parent=Msa0330340-mRNA-1
chr2_4 exon 44630968 44631097 44630968 ID=Msa0330340-mRNA-1:exon:13645;Parent=Msa0330340-mRNA-1
chr2_4 exon 44631773 44631862 44631773 ID=Msa0330340-mRNA-1:exon:13646;Parent=Msa0330340-mRNA-1
chr2_4 exon 44632397 44632890 44632397 ID=Msa0330340-mRNA-1:exon:13647;Parent=Msa0330340-mRNA-1
chr2_4 exon 44633278 44633358 44633278 ID=Msa0330340-mRNA-1:exon:13648;Parent=Msa0330340-mRNA-1
chr2_4 exon 44633505 44633609 44633505 ID=Msa0330340-mRNA-1:exon:13649;Parent=Msa0330340-mRNA-1
chr2_4 exon 44633829 44633942 44633829 ID=Msa0330340-mRNA-1:exon:13650;Parent=Msa0330340-mRNA-1
chr2_4 exon 44634050 44634133 44634050 ID=Msa0330340-mRNA-1:exon:13651;Parent=Msa0330340-mRNA-1
chr2_4 exon 44634664 44635419 44634664 ID=Msa0330340-mRNA-1:exon:13652;Parent=Msa0330340-mRNA-1
chr2_4 five_prime_UTR 44629102 44629991 44629102 ID=Msa0330340-mRNA-1:five_prime_utr;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44629992 44630318 44629992 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44630968 44631097 44630968 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44631773 44631862 44631773 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44632397 44632890 44632397 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44633278 44633358 44633278 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44633505 44633609 44633505 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44633829 44633942 44633829 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44634050 44634133 44634050 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 CDS 44634664 44634936 44634664 ID=Msa0330340-mRNA-1:cds;Parent=Msa0330340-mRNA-1
chr2_4 three_prime_UTR 44634937 44635419 44634937 ID=Msa0330340-mRNA-1:three_prime_utr;Parent=Msa0330340-mRNA-1
Gene Sequence

>Msa0330340

ATGGTGATGGAGGATATAGGGTTGTTCAATCAAGTTTGGGGATGGCTTCGGTCACGAAAAGATGCCTGTTGGCGTGCTCGAACTGTGGTGTTTTGTTGTAGAGACAAAACTGCGATGTTTATTGAACGGCATTGGCCGATGGTATGCAGGGGTTGCTCGAAATTGGGGAGCTTACTTACATTATCGTTGATTTTTTGGAAGGACTCTGCTGTAAGGGGGTTTCAGTCTTTCATTAAGTTTGGTTCAGTGATGCTCTTGCTTATAATGTGGAGCTGCTTTCTTAGTCTGACTTCGATGTATTGCTTGGTTTACGTGCTTGTTAGTATGGTTACTGCTGGGGTTGCTGTCCAATACTTGGGTTATACTCCTGGGCTTTTTATCGTAGGGCTTTTTGCTATCCTTATTTTGTGGATGTATGCCAACTTTCTGATCACAGGATTACTACTCATAGTTGGAGTTCAGATTAGTTCTGATTTGTATTTTAAGCAGGATCATATGATCTGTGCTACAGTTCCTAAGTTACAAGCTTTCCTCCTCATTATCCTAGGTTGCTTGTTCTCCCTAAATCGTGCACGCTTGGTGGTATTAATTGGAACCGCATATGCTATGTATTCTGTTCAAGTAAAAGTGGGATGGCTTGGCGTTTTCCTTGCCATAAACCTTGCATTTCTTTCAAATGACATTTTGAATTTTCTGCTTCAATGGTTTGATAATGTGAGTGAAAGTTCGCATCCTGAAGAGCAGAAGCAATCGGAGACAGTTATGGAAGACGACTTCGCTGAAGAGTGTGAATATCCTATCCCACCAGTTGAATCTGAGAATTTGCATTCATGCAAATCATCCAGTAAACCACCTGCTGTCACCACATCAGTTGTTGATAAGCAGAAAGAAATTTTGGTTACCAAAGTTGTAAAAGAGCAGACAAATTCAATTGATGAAATGAGAAGGATATTGAAGAGTCTTAATCATTATGATGCCCTTGGATTTAGCCGCCACAAAAAGATCGATGCAGCAGTTTTGAAAAAGGAATACCGGAAAAAGGCTATGCTCGTGCATCCTGATAAAAATATGGGCAGTTCTATGTCAAGCGAGTCATTCAAGAAACTTCAATGTGCATATGAGGTTCTTTCTGACTCTGTGAAGAAGCGAGACTATGATGAACAATTAAGAAAAGAAGAATCCATGGCTAAAAGCGTGTGCCAGAAATCCCACAGCAGTTCACATCAGGATAATACTGAATATCGTTCCGAAGAATCCAGACGGATACAGTGCACAAAGTGCGGTAATTCACATGTTTGGGTATGCACCAACAGGAGCAAGGCCAAAGCAAGATGGTGTCAGGATTGCTGTCAGTTTCATCAAGCAAAGGATGGAGATGGATGGGTTGAATATAAGGGATCTTTGGTTTTTGACAGGACTCAAAAAGGAATGGCTTGTAGGCCTAACACCCACCGACCGAGCTTCCATGTAAACATGGTTGGCTTGGAGAAAAGCCATTCCTGTAACTCAAGTAGATTCCCATGGGATTTGGACGCCGAAATGATGATGGATGAAGACGAAGAGGCATTTGACCTGTGGCTTCAACAGGCTTTAGCATCTGGTCTCTTTTGCGAGTCCTCAAAACGCAGGAAGAGTTGGAGTCCATTCAAATTGCCTCAAAAGAAAGGGAAAAAGCAATGGCGAAGAACGTCTTGCTGA

Protein sequence

>Msa0330340

MVMEDIGLFNQVWGWLRSRKDACWRARTVVFCCRDKTAMFIERHWPMVCRGCSKLGSLLTLSLIFWKDSAVRGFQSFIKFGSVMLLLIMWSCFLSLTSMYCLVYVLVSMVTAGVAVQYLGYTPGLFIVGLFAILILWMYANFLITGLLLIVGVQISSDLYFKQDHMICATVPKLQAFLLIILGCLFSLNRARLVVLIGTAYAMYSVQVKVGWLGVFLAINLAFLSNDILNFLLQWFDNVSESSHPEEQKQSETVMEDDFAEECEYPIPPVESENLHSCKSSSKPPAVTTSVVDKQKEILVTKVVKEQTNSIDEMRRILKSLNHYDALGFSRHKKIDAAVLKKEYRKKAMLVHPDKNMGSSMSSESFKKLQCAYEVLSDSVKKRDYDEQLRKEESMAKSVCQKSHSSSHQDNTEYRSEESRRIQCTKCGNSHVWVCTNRSKAKARWCQDCCQFHQAKDGDGWVEYKGSLVFDRTQKGMACRPNTHRPSFHVNMVGLEKSHSCNSSRFPWDLDAEMMMDEDEEAFDLWLQQALASGLFCESSKRRKSWSPFKLPQKKGKKQWRRTSC*