AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1280990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280990 MtrunA17_Chr4g0002601 92.468 863 64 1 1 862 1 863 0.0 1659
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280990 AT2G47300.2 47.872 846 386 17 19 856 21 819 0.0 686
Msa1280990 AT2G47300.4 46.183 786 368 15 19 796 21 759 0.0 607
Msa1280990 AT2G47300.3 44.559 680 326 16 185 856 16 652 2.41e-155 470

Find 214 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGATGATTCTGTTCTTTC+TGG 0.054912 8_3:-20064959 Msa1280990:CDS
TGCCTAGATGACATGAATTT+TGG 0.105298 8_3:-20063245 Msa1280990:CDS
TGAGGGTCAACTTGCAAAAT+TGG 0.144658 8_3:-20063810 Msa1280990:CDS
TTTAATAAACTTAGAGATTC+TGG 0.171405 8_3:+20062230 None:intergenic
AACAGAATCATCGTGATTTC+TGG 0.175577 8_3:+20064967 None:intergenic
AATAGAGCCGATTTCAATTA+AGG 0.204495 8_3:-20063462 Msa1280990:CDS
TTGGAAAAGAGTAAAGATTT+TGG 0.219252 8_3:-20063383 Msa1280990:CDS
ATGTACTGTTTAGTTGCTTT+TGG 0.221780 8_3:-20065970 Msa1280990:five_prime_UTR
TGGATTCCACTTGTCTCTAA+TGG 0.225620 8_3:-20062802 Msa1280990:CDS
AAGAGAATTCCTCCGGTAAA+TGG 0.237106 8_3:-20061178 Msa1280990:CDS
AGAATCTCTAAGTTTATTAA+AGG 0.245051 8_3:-20062228 Msa1280990:CDS
TTGCAAAGAGCTTGCTGATT+TGG 0.247309 8_3:-20063414 Msa1280990:CDS
TTAATTGAAATCGGCTCTAT+TGG 0.248763 8_3:+20063464 None:intergenic
TGTGCCCCTTTCTTGCAATT+TGG 0.260460 8_3:+20065613 None:intergenic
TAACAGCAATCGACCGGTTT+TGG 0.265238 8_3:+20062278 None:intergenic
ATCCTTCTGACGTATCTTTC+TGG 0.277975 8_3:-20062077 Msa1280990:CDS
TCTGGGATGTGTTACTTCTA+TGG 0.285905 8_3:+20064985 None:intergenic
GGATTCCACTTGTCTCTAAT+GGG 0.295341 8_3:-20062801 Msa1280990:CDS
TAAGTTGGGTTAAAGCCTTC+TGG 0.296727 8_3:-20062822 Msa1280990:CDS
GTGGGGTTACCACCTTCCTC+TGG 0.297256 8_3:-20065385 Msa1280990:CDS
GACTCTGAGAATGCATTTGA+TGG 0.300414 8_3:-20062348 Msa1280990:CDS
TTCTATTGTCCTAGAATATC+AGG 0.303319 8_3:-20060798 Msa1280990:CDS
TGCAAAGAGCTTGCTGATTT+GGG 0.314452 8_3:-20063413 Msa1280990:CDS
AGATCTTGAGCACTGCTCTT+TGG 0.318892 8_3:+20063208 None:intergenic
CTTGCAAAATTGGAATTAGT+TGG 0.326710 8_3:-20063800 Msa1280990:CDS
AGTTTAGAAATCTGTAAAAT+AGG 0.335812 8_3:-20066094 Msa1280990:five_prime_UTR
CTATTATACTTCCCTTAAGT+TGG 0.342403 8_3:-20062837 Msa1280990:CDS
AGTTCCCATCCTGCCTCCTT+GGG 0.348306 8_3:-20062502 Msa1280990:CDS
AAATATTAAATCCTGTTAGA+AGG 0.352466 8_3:-20063751 Msa1280990:intron
TAAGCAACAAACCTTCTAAC+AGG 0.354267 8_3:+20063740 None:intergenic
CACCTTCCTCTGGGTCTTCA+AGG 0.356395 8_3:-20065375 Msa1280990:CDS
CTTAGAGCCTTAATTGAAAT+CGG 0.358250 8_3:+20063455 None:intergenic
ATCATTTGTTCTTCTCTTGA+GGG 0.358847 8_3:-20063827 Msa1280990:CDS
GAGTTCCCATCCTGCCTCCT+TGG 0.359963 8_3:-20062503 Msa1280990:CDS
GAAGGCTTTAACCCAACTTA+AGG 0.363709 8_3:+20062825 None:intergenic
AGAGAATTCCTCCGGTAAAT+GGG 0.376369 8_3:-20061177 Msa1280990:CDS
CAAGGCATACTCACGCTTCA+TGG 0.380612 8_3:-20062589 Msa1280990:CDS
GTTCTTTCTGGCACAACCTA+TGG 0.382892 8_3:-20064947 Msa1280990:CDS
GTTACGTCAGCTTGTGTTCA+AGG 0.383628 8_3:-20061095 Msa1280990:CDS
AGGATATGCTAATCTAAAAC+TGG 0.383974 8_3:-20064622 Msa1280990:CDS
TGCAATCCGGGAAATCTTGC+GGG 0.385327 8_3:+20062610 None:intergenic
GGAAGACAATGTCCTTTCTA+TGG 0.386496 8_3:-20063297 Msa1280990:CDS
TTCGCTCCTTCTCTGCTTCA+CGG 0.386929 8_3:+20060874 None:intergenic
GCTATGGGTGCTGAACCTTT+AGG 0.391485 8_3:+20065783 None:intergenic
ATTCAGAAATTTGAACGAAC+AGG 0.395401 8_3:+20066331 None:intergenic
CTATTACTCTGCCATTCAAT+TGG 0.399416 8_3:-20065143 Msa1280990:CDS
CACCGGAGGCTTCAAGCCTC+TGG 0.402040 8_3:+20063319 None:intergenic
CGTGAGTATGCCTTGCAATC+CGG 0.402264 8_3:+20062597 None:intergenic
CTCTTGCAAAACATAGCTTA+TGG 0.402941 8_3:+20062160 None:intergenic
ACAAGTGATACAGTCTAATC+TGG 0.407020 8_3:-20065997 Msa1280990:five_prime_UTR
AAGGCTTTAACCCAACTTAA+GGG 0.407159 8_3:+20062826 None:intergenic
AGAGTGAACCTCTTTCTTGC+AGG 0.407762 8_3:+20064599 None:intergenic
TAATGACCAAATTGCAAGAA+AGG 0.410081 8_3:-20065619 Msa1280990:CDS
AAATTGGAATTAGTTGGATC+AGG 0.410339 8_3:-20063794 Msa1280990:CDS
CGTTGAAGGCTTTGAAGCTC+AGG 0.410712 8_3:+20065711 None:intergenic
TATTATACTTCCCTTAAGTT+GGG 0.412430 8_3:-20062836 Msa1280990:CDS
TTGCGAGGTGGCGCTGCTAT+GGG 0.412445 8_3:+20065768 None:intergenic
CTGGGATGTGTTACTTCTAT+GGG 0.416101 8_3:+20064986 None:intergenic
CTCTTACTGTTAAGGATCCT+CGG 0.419333 8_3:-20063514 Msa1280990:CDS
TTTGCGAGGTGGCGCTGCTA+TGG 0.419684 8_3:+20065767 None:intergenic
AGTCTGATGTTGATGATCTA+TGG 0.419977 8_3:-20063352 Msa1280990:CDS
GAAGAGCAAAACCCATTCTC+AGG 0.420741 8_3:+20065474 None:intergenic
AGTTGGAGCACCGGTTTCTC+AGG 0.427631 8_3:-20064823 Msa1280990:CDS
ATTTAAGATCTGTTGCGTAT+AGG 0.428231 8_3:-20060832 Msa1280990:CDS
CGACTAATCTCTGGTTGGTT+AGG 0.428812 8_3:-20066118 Msa1280990:five_prime_UTR
GGACGCCACATATAAGTTAC+AGG 0.429934 8_3:+20064792 None:intergenic
GAGTCTCACCGGTGGCCTAT+TGG 0.430215 8_3:-20061122 Msa1280990:CDS
GATCATTTGTTCTTCTCTTG+AGG 0.430235 8_3:-20063828 Msa1280990:CDS
AATGACCAAATTGCAAGAAA+GGG 0.430274 8_3:-20065618 Msa1280990:CDS
TATCAGTATTCCCCATTTAC+CGG 0.431950 8_3:+20061166 None:intergenic
AATGTTATCTCTTACTGTTA+AGG 0.432713 8_3:-20063522 Msa1280990:CDS
ACGTATCTTTCTGGACTTCA+AGG 0.433594 8_3:-20062068 Msa1280990:intron
AGCTGCTGAATGTGATCAAA+AGG 0.436538 8_3:-20062559 Msa1280990:CDS
AGAGACTGAGAACGCATGTT+TGG 0.437395 8_3:-20065437 Msa1280990:CDS
GCCATTCCATCTGCTGCATA+AGG 0.439701 8_3:+20062252 None:intergenic
CATGCTTCTGCCTTTGAAGA+AGG 0.439897 8_3:-20064642 Msa1280990:CDS
TCTCTATCAATTGAATCATC+TGG 0.442415 8_3:+20061143 None:intergenic
GGCTTTGAAGCTCAGGGGCA+CGG 0.447375 8_3:+20065718 None:intergenic
GTGAGTATGCCTTGCAATCC+GGG 0.453013 8_3:+20062598 None:intergenic
GCGAAATATACGTACTTGTC+AGG 0.453281 8_3:-20060856 Msa1280990:CDS
TCTAATGGGGCACATGCAAT+AGG 0.456308 8_3:-20062787 Msa1280990:CDS
CAGTGTAGTTTGTGTTTGTA+CGG 0.456607 8_3:-20065877 Msa1280990:five_prime_UTR
TGGGGTTACCACCTTCCTCT+GGG 0.456908 8_3:-20065384 Msa1280990:CDS
CAGCAAGAGGCTTGCAGCAG+AGG 0.460920 8_3:-20060954 Msa1280990:CDS
GGAGCAATTGCCTGAGAAAC+CGG 0.463024 8_3:+20064813 None:intergenic
CTCAAGAGTAACCCTGAGAA+TGG 0.463686 8_3:-20065486 Msa1280990:CDS
AACATGCGTTCTCAGTCTCT+TGG 0.464474 8_3:+20065440 None:intergenic
ATTCTAAAACTTTCATATTG+TGG 0.465392 8_3:-20066242 Msa1280990:five_prime_UTR
TTACTTGATGAAACCAAAAC+CGG 0.465795 8_3:-20062291 Msa1280990:CDS
TATTGACAGCTTCATCAAGT+TGG 0.467639 8_3:-20064840 Msa1280990:intron
ATTTGAACGAACAGGAGAAA+AGG 0.475366 8_3:+20066339 None:intergenic
GAAAGGGGCACAGGAGAAAG+AGG 0.477617 8_3:-20065602 Msa1280990:CDS
TGCTGATTTGGGAGGAATGT+TGG 0.479953 8_3:-20063402 Msa1280990:CDS
GATGGAATTGTAGCAAGGAC+AGG 0.483715 8_3:-20062330 Msa1280990:CDS
TTGTCACATAAATCAACATC+AGG 0.486201 8_3:+20064717 None:intergenic
AGAATTTAACCATGCGTTCA+CGG 0.486596 8_3:+20063267 None:intergenic
ACAGAATCATCGTGATTTCT+GGG 0.486757 8_3:+20064968 None:intergenic
TTACTCTGCCATTCAATTGG+AGG 0.487918 8_3:-20065140 Msa1280990:CDS
TCGCTCCTTCTCTGCTTCAC+GGG 0.489105 8_3:+20060875 None:intergenic
TTATTTCCTTATGCAGCAGA+TGG 0.489862 8_3:-20062258 Msa1280990:CDS
TCTTACTGTTAAGGATCCTC+GGG 0.491616 8_3:-20063513 Msa1280990:CDS
ATCTGTAAAATAGGTGATTG+AGG 0.491704 8_3:-20066085 Msa1280990:five_prime_UTR
ATGTGACAAATCAGAAAGAA+TGG 0.492645 8_3:-20064703 Msa1280990:CDS
TTGTGGCCGCAATTGCTGTT+GGG 0.496429 8_3:-20066225 Msa1280990:five_prime_UTR
TCCTTGTCAAACCCTTGTCC+TGG 0.496459 8_3:-20062393 Msa1280990:CDS
AGCAAGAGGCTTGCAGCAGA+GGG 0.498701 8_3:-20060953 Msa1280990:CDS
AGTTCATCTTCACCCATTCA+AGG 0.499877 8_3:-20062139 Msa1280990:CDS
GACTCTTGACCTTTCAGCTA+GGG 0.500364 8_3:-20062436 Msa1280990:CDS
AGATGCCCGTGAAGCAGAGA+AGG 0.501884 8_3:-20060880 Msa1280990:CDS
AGTCACCATTGCTGTTCCAT+AGG 0.502080 8_3:+20064931 None:intergenic
AACCAGAGGCTTGAAGCCTC+CGG 0.504573 8_3:-20063321 Msa1280990:CDS
ACAGTATTTCAGAAAATCGT+TGG 0.505314 8_3:-20063640 Msa1280990:intron
CCCCAAAATTCATGTCATCT+AGG 0.510108 8_3:+20063243 None:intergenic
CTCTGGACCCTCCAATTGAA+TGG 0.511136 8_3:+20065132 None:intergenic
CATAACTATGAGAATTATAG+AGG 0.514555 8_3:+20066173 None:intergenic
GCTGACGTAACAAAGCCAAT+AGG 0.516172 8_3:+20061107 None:intergenic
TCCTTATGCAGCAGATGGAA+TGG 0.516719 8_3:-20062253 Msa1280990:CDS
CTCAAATTTCTTACAGAAGG+AGG 0.517258 8_3:+20062525 None:intergenic
AATTGCGTGCGACTAATCTC+TGG 0.518909 8_3:-20066127 Msa1280990:five_prime_UTR
TTGTGTTTATTCAGAGGGAA+AGG 0.521942 8_3:-20065220 Msa1280990:intron
GCTTTGAAGCTCAGGGGCAC+GGG 0.522543 8_3:+20065719 None:intergenic
ACTCTCAAATTTCTTACAGA+AGG 0.523204 8_3:+20062522 None:intergenic
ATTGTGGCCGCAATTGCTGT+TGG 0.523423 8_3:-20066226 Msa1280990:five_prime_UTR
AATTGGAATTAGTTGGATCA+GGG 0.526110 8_3:-20063793 Msa1280990:CDS
TACTCTGCCATTCAATTGGA+GGG 0.527574 8_3:-20065139 Msa1280990:CDS
CATCTTCACCCATTCAAGGA+AGG 0.528184 8_3:-20062135 Msa1280990:CDS
CACGGTGCTTCTCCATAGAA+AGG 0.530757 8_3:+20063285 None:intergenic
CCACAATATTGAACTGCCAT+TGG 0.530899 8_3:-20066201 Msa1280990:five_prime_UTR
CAATATTGAACTGCCATTGG+AGG 0.532625 8_3:-20066198 Msa1280990:five_prime_UTR
TCAAGAGTAACCCTGAGAAT+GGG 0.533313 8_3:-20065485 Msa1280990:CDS
AAAGCTCAAACAAGGTGTGC+TGG 0.534899 8_3:-20065179 Msa1280990:CDS
GAACAATACCCCAAGGAGGC+AGG 0.535102 8_3:+20062493 None:intergenic
TATTCAGAGGGAAAGGTTCG+AGG 0.535463 8_3:-20065213 Msa1280990:intron
ATGTGTTACTTCTATGGGAG+AGG 0.535981 8_3:+20064991 None:intergenic
TATTTCAAAGAGAATTCCTC+CGG 0.540175 8_3:-20061185 Msa1280990:CDS
AGGAAATAACAGCAATCGAC+CGG 0.540992 8_3:+20062272 None:intergenic
GTTTGACAAGGAATTAGCAT+TGG 0.549360 8_3:+20062404 None:intergenic
ATTAGCATATCCTTCTTCAA+AGG 0.551594 8_3:+20064632 None:intergenic
CAAGAAAATATCACAGACCT+AGG 0.553764 8_3:-20064762 Msa1280990:CDS
AAAACTGGCCTGCAAGAAAG+AGG 0.561988 8_3:-20064607 Msa1280990:intron
TTGCAATCCGGGAAATCTTG+CGG 0.562083 8_3:+20062609 None:intergenic
CGTCAGCTTGTGTTCAAGGA+AGG 0.563437 8_3:-20061091 Msa1280990:intron
GCAAGATTTCCCGGATTGCA+AGG 0.563856 8_3:-20062607 Msa1280990:CDS
CTCAGTTAAGAGAGGAACAG+TGG 0.569204 8_3:-20060907 Msa1280990:CDS
TTCCTCTGGGTCTTCAAGGA+AGG 0.569696 8_3:-20065371 Msa1280990:intron
ATACCCCAAGGAGGCAGGAT+GGG 0.570094 8_3:+20062498 None:intergenic
GTTGAAGGCTTTGAAGCTCA+GGG 0.572937 8_3:+20065712 None:intergenic
CCAATGGCAGTTCAATATTG+TGG 0.575336 8_3:+20066201 None:intergenic
AAATTGCAAGAAAGGGGCAC+AGG 0.575712 8_3:-20065611 Msa1280990:CDS
TTGCTCCTGTAACTTATATG+TGG 0.576245 8_3:-20064797 Msa1280990:CDS
GCACGGGATTCTGCAAACTT+CGG 0.577655 8_3:+20065735 None:intergenic
GCTTCATCAAGTTGGAGCAC+CGG 0.578040 8_3:-20064832 Msa1280990:CDS
GCAATGATTATAAGTCTCAA+AGG 0.578223 8_3:-20065668 Msa1280990:CDS
ATTCAGAGGGAAAGGTTCGA+GGG 0.578851 8_3:-20065212 Msa1280990:intron
TTTACTATCTCAGTTAAGAG+AGG 0.579772 8_3:-20060915 Msa1280990:CDS
GATATGAAGGAATTGACCAT+GGG 0.583629 8_3:-20063161 Msa1280990:CDS
GTATTTCAGAAAATCGTTGG+CGG 0.583685 8_3:-20063637 Msa1280990:CDS
GGAGAAGCACCGTGAACGCA+TGG 0.584425 8_3:-20063276 Msa1280990:CDS
CAGTTCAGTGAAAAGAGAAG+TGG 0.586513 8_3:-20061240 Msa1280990:CDS
TCTTGACCTTTCAGCTAGGG+AGG 0.586888 8_3:-20062433 Msa1280990:CDS
GAAAGGACATTGTCTTCCAC+CGG 0.587378 8_3:+20063302 None:intergenic
TAGGTTTGCGAGAGAAGCAG+TGG 0.587984 8_3:-20062768 Msa1280990:CDS
AGACTCTTGACCTTTCAGCT+AGG 0.588904 8_3:-20062437 Msa1280990:CDS
TTCTACTTAGTTCTCAACGA+TGG 0.590975 8_3:-20065826 Msa1280990:exon
AATACCCCAAGGAGGCAGGA+TGG 0.591808 8_3:+20062497 None:intergenic
TGTGGTCCCAACAGCAATTG+CGG 0.593488 8_3:+20066219 None:intergenic
AAAGAGCTTGCTGATTTGGG+AGG 0.594632 8_3:-20063410 Msa1280990:CDS
ACAAACTACACTGTAGAACA+TGG 0.595219 8_3:+20065887 None:intergenic
AAAGATACGTCAGAAGGATG+TGG 0.599165 8_3:+20062081 None:intergenic
GTTAAGAGAGGAACAGTGGA+AGG 0.599221 8_3:-20060903 Msa1280990:CDS
GTAACCCCACAACTTGGTCA+TGG 0.600119 8_3:+20065398 None:intergenic
AATTATAGAGGAGCCTCCAA+TGG 0.600261 8_3:+20066185 None:intergenic
ATGACCAAATTGCAAGAAAG+GGG 0.601491 8_3:-20065617 Msa1280990:CDS
TGATATGAAGGAATTGACCA+TGG 0.602371 8_3:-20063162 Msa1280990:CDS
TCAAATCCTCCCTAGCTGAA+AGG 0.602987 8_3:+20062427 None:intergenic
CAACAAAGAGATTAGCACAA+TGG 0.603231 8_3:-20062460 Msa1280990:CDS
GTTCCCATCCTGCCTCCTTG+GGG 0.604969 8_3:-20062501 Msa1280990:CDS
GAGAATTCCTCCGGTAAATG+GGG 0.610816 8_3:-20061176 Msa1280990:CDS
TTCCTTGAAGACCCAGAGGA+AGG 0.611374 8_3:+20065373 None:intergenic
AAGGTGGTAACCCCACAACT+TGG 0.613131 8_3:+20065392 None:intergenic
CAGAGGCTTGAAGCCTCCGG+TGG 0.616523 8_3:-20063318 Msa1280990:CDS
CATTCAATTGGAGGGTCCAG+AGG 0.616752 8_3:-20065131 Msa1280990:intron
AGGACATTGTCTTCCACCGG+AGG 0.616810 8_3:+20063305 None:intergenic
TGTGCCCCATTAGAGACAAG+TGG 0.618914 8_3:+20062796 None:intergenic
GATTCCACTTGTCTCTAATG+GGG 0.621104 8_3:-20062800 Msa1280990:CDS
AGTTCAGTGAAAAGAGAAGT+GGG 0.627351 8_3:-20061239 Msa1280990:CDS
TGTGTTACTTCTATGGGAGA+GGG 0.628291 8_3:+20064992 None:intergenic
CTATGGTATGCTACAACCAG+AGG 0.628647 8_3:-20063335 Msa1280990:CDS
CATTTGATGGAATTGTAGCA+AGG 0.633029 8_3:-20062335 Msa1280990:CDS
AAGCATGTATCCACACCCAA+AGG 0.635207 8_3:+20064658 None:intergenic
GCGTGCGACTAATCTCTGGT+TGG 0.636457 8_3:-20066123 Msa1280990:five_prime_UTR
CTTGAAGACCCAGAGGAAGG+TGG 0.636879 8_3:+20065376 None:intergenic
ACAAGTAAATGAGGTCAATG+AGG 0.637683 8_3:-20066270 Msa1280990:five_prime_UTR
AAGAGCAAAACCCATTCTCA+GGG 0.639457 8_3:+20065475 None:intergenic
GTCCAGAAAGATACGTCAGA+AGG 0.641525 8_3:+20062075 None:intergenic
CAGTATTCCCCATTTACCGG+AGG 0.644448 8_3:+20061169 None:intergenic
AGAGACAAGTGGAATCCAGA+AGG 0.647770 8_3:+20062807 None:intergenic
CACAACCTATGGAACAGCAA+TGG 0.648609 8_3:-20064936 Msa1280990:intron
TATCTTCGACGAACATGTCG+AGG 0.649178 8_3:+20065513 None:intergenic
TAACAAAGCCAATAGGCCAC+CGG 0.652198 8_3:+20061114 None:intergenic
CAATTGATAGAGAGTCTCAC+CGG 0.654193 8_3:-20061133 Msa1280990:CDS
ATAGATCATCAACATCAGAC+TGG 0.655562 8_3:+20063354 None:intergenic
CTGTTGATAAAGCTCAAACA+AGG 0.657488 8_3:-20065187 Msa1280990:CDS
GAATATAATTAACACAACCA+TGG 0.663836 8_3:+20065946 None:intergenic
ATTATTCAGATGGAAAAGAG+AGG 0.664844 8_3:-20063857 Msa1280990:intron
GAGAAATAATGCTTGATACG+AGG 0.669822 8_3:-20062206 Msa1280990:CDS
TGTAACGGATCTTGATACTG+AGG 0.675802 8_3:-20066299 Msa1280990:five_prime_UTR
ACCAGGACAAGGGTTTGACA+AGG 0.692431 8_3:+20062392 None:intergenic
GTATTGTGAACAATACCCCA+AGG 0.699160 8_3:+20062486 None:intergenic
TACCTTCCTTGAAGACCCAG+AGG 0.702311 8_3:+20065369 None:intergenic
TTGAAGGCTTTGAAGCTCAG+GGG 0.710449 8_3:+20065713 None:intergenic
TTGATAGAGAGTCTCACCGG+TGG 0.722507 8_3:-20061130 Msa1280990:CDS
ATATGAAGGAATTGACCATG+GGG 0.726362 8_3:-20063160 Msa1280990:intron
TTGTGAACAATACCCCAAGG+AGG 0.760527 8_3:+20062489 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGTAATTTATAAATATTAT+AGG - chr8_3:20061855-20061874 Msa1280990:intron 10.0%
!! ATAATTATCATTAATAGAAA+GGG + chr8_3:20064949-20064968 None:intergenic 10.0%
!! TATAATTATCATTAATAGAA+AGG + chr8_3:20064950-20064969 None:intergenic 10.0%
!! AAATAAAAAACAAATTTCAA+TGG + chr8_3:20065006-20065025 None:intergenic 10.0%
!!! ATATGAAAGTTTTAGAATTA+CGG + chr8_3:20060722-20060741 None:intergenic 15.0%
!!! TTTGTTGATTACATTATTTA+GGG - chr8_3:20061624-20061643 Msa1280990:intron 15.0%
!! TAATATTTATAAATTACCTC+TGG + chr8_3:20061854-20061873 None:intergenic 15.0%
!!! CATTTTTTAAAAGAAGAATA+GGG + chr8_3:20063786-20063805 None:intergenic 15.0%
!!! TCATTTTTTAAAAGAAGAAT+AGG + chr8_3:20063787-20063806 None:intergenic 15.0%
!!! TCTTTTAAAAAATGATATGA+AGG - chr8_3:20063792-20063811 Msa1280990:CDS 15.0%
!!! TTTTTTTTTTTTGAAAGCAA+AGG - chr8_3:20063911-20063930 Msa1280990:intron 15.0%
!! TATAGTACACAATATATAAA+AGG + chr8_3:20064063-20064082 None:intergenic 15.0%
!! AATATTAAATTTATGTCTTG+AGG - chr8_3:20065160-20065179 Msa1280990:CDS 15.0%
!!! TTTTATGTTTGATTAAACTA+TGG - chr8_3:20066219-20066238 Msa1280990:five_prime_UTR 15.0%
!!! ATTCTAAAACTTTCATATTG+TGG - chr8_3:20060724-20060743 Msa1280990:intron 20.0%
!! AGTTTAGAAATCTGTAAAAT+AGG - chr8_3:20060872-20060891 Msa1280990:CDS 20.0%
!! ACAAATTTGTATGAAAAACA+AGG - chr8_3:20060910-20060929 Msa1280990:CDS 20.0%
!!! CTTTGTTGATTACATTATTT+AGG - chr8_3:20061623-20061642 Msa1280990:intron 20.0%
!!! TCCATATGTTTTAAAGTTTT+TGG - chr8_3:20061706-20061725 Msa1280990:intron 20.0%
!!! ACCAAAAACTTTAAAACATA+TGG + chr8_3:20061710-20061729 None:intergenic 20.0%
!!! TAAGAAAAGATTCCTTTTTT+AGG - chr8_3:20062492-20062511 Msa1280990:CDS 20.0%
!! TTATTCAATGAACCTAAAAA+AGG + chr8_3:20062507-20062526 None:intergenic 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - chr8_3:20062591-20062610 Msa1280990:CDS 20.0%
!!! TTAATAGTTTAACTTCAACA+GGG + chr8_3:20063017-20063036 None:intergenic 20.0%
!!! TTTAATAGTTTAACTTCAAC+AGG + chr8_3:20063018-20063037 None:intergenic 20.0%
!! ATATAATGTCAGTTCATATA+CGG + chr8_3:20063058-20063077 None:intergenic 20.0%
!! TATCTTTACTATTATTCAGA+TGG - chr8_3:20063099-20063118 Msa1280990:intron 20.0%
!! AAATATTAAATCCTGTTAGA+AGG - chr8_3:20063215-20063234 Msa1280990:CDS 20.0%
!! AAATATATTCATAAACAGCA+TGG + chr8_3:20063879-20063898 None:intergenic 20.0%
!! CTGTTTATGAATATATTTCA+AGG - chr8_3:20063881-20063900 Msa1280990:intron 20.0%
!!! TTTTATGATTATCTTGTAGA+TGG - chr8_3:20064105-20064124 Msa1280990:intron 20.0%
!! TTTAATAAACTTAGAGATTC+TGG + chr8_3:20064739-20064758 None:intergenic 20.0%
!! AGAATCTCTAAGTTTATTAA+AGG - chr8_3:20064738-20064757 Msa1280990:CDS 20.0%
!! TAATTTAACAGTGAAATCAT+GGG - chr8_3:20064921-20064940 Msa1280990:intron 20.0%
!!! AACTTTTTTTCTTTTTTGGT+GGG + chr8_3:20065264-20065283 None:intergenic 20.0%
!!! TAACTTTTTTTCTTTTTTGG+TGG + chr8_3:20065265-20065284 None:intergenic 20.0%
!! ACCAAAAAAGAAAAAAAGTT+AGG - chr8_3:20065264-20065283 Msa1280990:intron 20.0%
!!! ACCTAACTTTTTTTCTTTTT+TGG + chr8_3:20065268-20065287 None:intergenic 20.0%
!!! AACTTTAGAGTAAATTATTC+CGG - chr8_3:20065413-20065432 Msa1280990:CDS 20.0%
!! AAATGTTCCTTATTAGAAAA+AGG - chr8_3:20066275-20066294 Msa1280990:five_prime_UTR 20.0%
!! AATGTTCCTTATTAGAAAAA+GGG - chr8_3:20066276-20066295 Msa1280990:five_prime_UTR 20.0%
! AGGAAAAATACAAGTAAATG+AGG - chr8_3:20060687-20060706 Msa1280990:intron 25.0%
! CATAACTATGAGAATTATAG+AGG + chr8_3:20060796-20060815 None:intergenic 25.0%
! GAATATAATTAACACAACCA+TGG + chr8_3:20061023-20061042 None:intergenic 25.0%
! GAACATGGAAAAAAAAAACA+TGG + chr8_3:20061067-20061086 None:intergenic 25.0%
!!! TTGGTTCATAGCTTTATTTA+AGG - chr8_3:20061900-20061919 Msa1280990:intron 25.0%
!! CTCTTCTTTAATTTCATCTA+TGG - chr8_3:20062388-20062407 Msa1280990:CDS 25.0%
!!! TTCTATTATTTTTCTTGTGC+TGG - chr8_3:20062431-20062450 Msa1280990:CDS 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG + chr8_3:20062482-20062501 None:intergenic 25.0%
! CTACTCAATGAATCTAAAAA+AGG - chr8_3:20062566-20062585 Msa1280990:CDS 25.0%
! CATATACGGTTTATAATTCT+TGG + chr8_3:20063044-20063063 None:intergenic 25.0%
! AATGTTATCTCTTACTGTTA+AGG - chr8_3:20063444-20063463 Msa1280990:CDS 25.0%
!! TTGGAAAAGAGTAAAGATTT+TGG - chr8_3:20063583-20063602 Msa1280990:CDS 25.0%
! TTGAATAATAATTTACCCCA+TGG + chr8_3:20063824-20063843 None:intergenic 25.0%
!! TTTTCTAATGTATCATAAGC+AGG + chr8_3:20063954-20063973 None:intergenic 25.0%
! TATTATACTTCCCTTAAGTT+GGG - chr8_3:20064130-20064149 Msa1280990:intron 25.0%
! GTAATTTAACAGTGAAATCA+TGG - chr8_3:20064920-20064939 Msa1280990:intron 25.0%
! TAATTAATTGAGAAACACAC+AGG + chr8_3:20065103-20065122 None:intergenic 25.0%
! TGTGTGTTTCTCAATTAATT+AGG - chr8_3:20065102-20065121 Msa1280990:intron 25.0%
! GACATAAATTTAATATTGCG+TGG + chr8_3:20065157-20065176 None:intergenic 25.0%
!!! ACTTTTTTTCTTTTTTGGTG+GGG + chr8_3:20065263-20065282 None:intergenic 25.0%
!! AAAAAGTTAGGTTGTAAATG+TGG - chr8_3:20065276-20065295 Msa1280990:intron 25.0%
!! AAAAGTTAGGTTGTAAATGT+GGG - chr8_3:20065277-20065296 Msa1280990:intron 25.0%
!! ATGTAGATTCTAAAGATAGA+GGG + chr8_3:20065443-20065462 None:intergenic 25.0%
!! TATGTAGATTCTAAAGATAG+AGG + chr8_3:20065444-20065463 None:intergenic 25.0%
!! TAAAATCCTTCGTATTTTAC+AGG - chr8_3:20065462-20065481 Msa1280990:CDS 25.0%
!! CAAAGTGTTCTATACAAAAT+TGG + chr8_3:20065496-20065515 None:intergenic 25.0%
! TCATTTCAACACAGTAATAA+TGG - chr8_3:20065548-20065567 Msa1280990:CDS 25.0%
! TATGTGTAAACACAACATAT+TGG - chr8_3:20065593-20065612 Msa1280990:CDS 25.0%
!!! ATAGCTTTTTCAAATAGAAG+TGG - chr8_3:20065656-20065675 Msa1280990:CDS 25.0%
! AAGTTACATTGCTACAAATA+GGG - chr8_3:20066242-20066261 Msa1280990:five_prime_UTR 25.0%
! ATGTTCCTTATTAGAAAAAG+GGG - chr8_3:20066277-20066296 Msa1280990:five_prime_UTR 25.0%
ATTCAGAAATTTGAACGAAC+AGG + chr8_3:20060638-20060657 None:intergenic 30.0%
!!! CTGAATTTTCAAGTCTGTAA+CGG - chr8_3:20060652-20060671 Msa1280990:three_prime_UTR 30.0%
ATCTGTAAAATAGGTGATTG+AGG - chr8_3:20060881-20060900 Msa1280990:CDS 30.0%
!! ACAGTCAGTTTTGTCAAATT+TGG - chr8_3:20060935-20060954 Msa1280990:CDS 30.0%
!! ATGTACTGTTTAGTTGCTTT+TGG - chr8_3:20060996-20061015 Msa1280990:intron 30.0%
! TATTTTCAACGATACGTTGA+AGG + chr8_3:20061272-20061291 None:intergenic 30.0%
GCAATGATTATAAGTCTCAA+AGG - chr8_3:20061298-20061317 Msa1280990:intron 30.0%
TAATGACCAAATTGCAAGAA+AGG - chr8_3:20061347-20061366 Msa1280990:intron 30.0%
AATGACCAAATTGCAAGAAA+GGG - chr8_3:20061348-20061367 Msa1280990:intron 30.0%
TTGTTGAGATGTATTTGAAC+TGG - chr8_3:20061657-20061676 Msa1280990:intron 30.0%
GATGTATTTGAACTGGATTA+TGG - chr8_3:20061664-20061683 Msa1280990:intron 30.0%
ATATGGATACTTGTAGCATT+AGG + chr8_3:20061693-20061712 None:intergenic 30.0%
TCTGAATAAACACAAAATCC+AGG + chr8_3:20061741-20061760 None:intergenic 30.0%
! TGGATTTTGTGTTTATTCAG+AGG - chr8_3:20061740-20061759 Msa1280990:intron 30.0%
! GGATTTTGTGTTTATTCAGA+GGG - chr8_3:20061741-20061760 Msa1280990:intron 30.0%
! AACCAAACCATTATTTTCAG+AGG + chr8_3:20061886-20061905 None:intergenic 30.0%
! TTTAAGGTTGTTCTGTTTAC+AGG - chr8_3:20061916-20061935 Msa1280990:intron 30.0%
!! AACATGGATTTTTCAACTAC+AGG + chr8_3:20062077-20062096 None:intergenic 30.0%
TTTGTTTGACTGAAACAACA+TGG + chr8_3:20062093-20062112 None:intergenic 30.0%
! GTGATATTTTCTTGGAAAGT+TGG + chr8_3:20062198-20062217 None:intergenic 30.0%
TTGTCACATAAATCAACATC+AGG + chr8_3:20062252-20062271 None:intergenic 30.0%
ATGTGACAAATCAGAAAGAA+TGG - chr8_3:20062263-20062282 Msa1280990:CDS 30.0%
! TTGTTCTTTTAGACACCTTT+GGG - chr8_3:20062293-20062312 Msa1280990:CDS 30.0%
ATTAGCATATCCTTCTTCAA+AGG + chr8_3:20062337-20062356 None:intergenic 30.0%
! AGGATATGCTAATCTAAAAC+TGG - chr8_3:20062344-20062363 Msa1280990:CDS 30.0%
CATTGAGTAGTTAATGTATG+TGG + chr8_3:20062556-20062575 None:intergenic 30.0%
ATCCAAACATAAGCATGATT+GGG - chr8_3:20062728-20062747 Msa1280990:intron 30.0%
ACAATAACGATTATTCCTTC+TGG - chr8_3:20062890-20062909 Msa1280990:intron 30.0%
! AAGTTAGATTTGTTTGTCCA+AGG - chr8_3:20062982-20063001 Msa1280990:intron 30.0%
ATTATTCAGATGGAAAAGAG+AGG - chr8_3:20063109-20063128 Msa1280990:intron 30.0%
ATCATTTGTTCTTCTCTTGA+GGG - chr8_3:20063139-20063158 Msa1280990:intron 30.0%
CTTGCAAAATTGGAATTAGT+TGG - chr8_3:20063166-20063185 Msa1280990:CDS 30.0%
AAATTGGAATTAGTTGGATC+AGG - chr8_3:20063172-20063191 Msa1280990:CDS 30.0%
AATTGGAATTAGTTGGATCA+GGG - chr8_3:20063173-20063192 Msa1280990:CDS 30.0%
CTGACATTAATGATCCAAAA+TGG - chr8_3:20063289-20063308 Msa1280990:CDS 30.0%
ACAGTATTTCAGAAAATCGT+TGG - chr8_3:20063326-20063345 Msa1280990:CDS 30.0%
!! ACTCTGTATTTTGAGAAACA+TGG + chr8_3:20063384-20063403 None:intergenic 30.0%
!! ATGCTCTTCATTTTTCAGTA+TGG + chr8_3:20063410-20063429 None:intergenic 30.0%
! TTAATTGAAATCGGCTCTAT+TGG + chr8_3:20063505-20063524 None:intergenic 30.0%
! AATAGAGCCGATTTCAATTA+AGG - chr8_3:20063504-20063523 Msa1280990:CDS 30.0%
CTTAGAGCCTTAATTGAAAT+CGG + chr8_3:20063514-20063533 None:intergenic 30.0%
!! AGGTTTTAACATCAGTATTC+AGG + chr8_3:20064043-20064062 None:intergenic 30.0%
CTATTATACTTCCCTTAAGT+TGG - chr8_3:20064129-20064148 Msa1280990:intron 30.0%
AAAAAAAGATGCAGTTTCTG+TGG + chr8_3:20064258-20064277 None:intergenic 30.0%
! AACTTTTCTCTTTATCCAGA+CGG - chr8_3:20064320-20064339 Msa1280990:intron 30.0%
ACTCTCAAATTTCTTACAGA+AGG + chr8_3:20064447-20064466 None:intergenic 30.0%
TTACTTGATGAAACCAAAAC+CGG - chr8_3:20064675-20064694 Msa1280990:CDS 30.0%
TAGCTATGAGATACAAGATA+TGG - chr8_3:20065047-20065066 Msa1280990:intron 30.0%
AGGTTGTAATATCTGATATG+TGG - chr8_3:20065122-20065141 Msa1280990:intron 30.0%
GGTTGTAATATCTGATATGT+GGG - chr8_3:20065123-20065142 Msa1280990:intron 30.0%
! AAAGTTAGGTTGTAAATGTG+GGG - chr8_3:20065278-20065297 Msa1280990:intron 30.0%
! TGTAGATTCTAAAGATAGAG+GGG + chr8_3:20065442-20065461 None:intergenic 30.0%
TTTGTATAGAACACTTTGAC+AGG - chr8_3:20065498-20065517 Msa1280990:CDS 30.0%
TTGTATAGAACACTTTGACA+GGG - chr8_3:20065499-20065518 Msa1280990:CDS 30.0%
! ATTATAAAATGTGAGGCGTT+TGG - chr8_3:20065632-20065651 Msa1280990:CDS 30.0%
TTCAAATAGAAGTGGCAATA+TGG - chr8_3:20065664-20065683 Msa1280990:CDS 30.0%
TCAAATAGAAGTGGCAATAT+GGG - chr8_3:20065665-20065684 Msa1280990:CDS 30.0%
TATTTCAAAGAGAATTCCTC+CGG - chr8_3:20065781-20065800 Msa1280990:CDS 30.0%
TCTCTATCAATTGAATCATC+TGG + chr8_3:20065826-20065845 None:intergenic 30.0%
TATGCTCAGGCTAATAAAAA+AGG + chr8_3:20065930-20065949 None:intergenic 30.0%
TTTACTATCTCAGTTAAGAG+AGG - chr8_3:20066051-20066070 Msa1280990:five_prime_UTR 30.0%
! ATTTAAGATCTGTTGCGTAT+AGG - chr8_3:20066134-20066153 Msa1280990:five_prime_UTR 30.0%
TTCTATTGTCCTAGAATATC+AGG - chr8_3:20066168-20066187 Msa1280990:five_prime_UTR 30.0%
!!! TGTCATTTTCCTGATATTCT+AGG + chr8_3:20066180-20066199 None:intergenic 30.0%
GAAGTTACATTGCTACAAAT+AGG - chr8_3:20066241-20066260 Msa1280990:five_prime_UTR 30.0%
! GATTTCCCCTTTTTCTAATA+AGG + chr8_3:20066285-20066304 None:intergenic 30.0%
ATTTGAACGAACAGGAGAAA+AGG + chr8_3:20060630-20060649 None:intergenic 35.0%
ACAAGTAAATGAGGTCAATG+AGG - chr8_3:20060696-20060715 Msa1280990:intron 35.0%
ACAAGTGATACAGTCTAATC+TGG - chr8_3:20060969-20060988 Msa1280990:intron 35.0%
ACAAACTACACTGTAGAACA+TGG + chr8_3:20061082-20061101 None:intergenic 35.0%
! CAGTGTAGTTTGTGTTTGTA+CGG - chr8_3:20061089-20061108 Msa1280990:intron 35.0%
! TTCTACTTAGTTCTCAACGA+TGG - chr8_3:20061140-20061159 Msa1280990:CDS 35.0%
GACGTAACTAAAAAGCCTAA+AGG - chr8_3:20061168-20061187 Msa1280990:CDS 35.0%
ATGACCAAATTGCAAGAAAG+GGG - chr8_3:20061349-20061368 Msa1280990:intron 35.0%
!! CAATGCTGAATCAGTTTTGA+AGG - chr8_3:20061413-20061432 Msa1280990:intron 35.0%
! ATTTTCCATGACCAAGTTGT+GGG - chr8_3:20061563-20061582 Msa1280990:intron 35.0%
!!! AGTTTTTGGTAACACTAACC+TGG - chr8_3:20061720-20061739 Msa1280990:intron 35.0%
TTGTGTTTATTCAGAGGGAA+AGG - chr8_3:20061746-20061765 Msa1280990:intron 35.0%
! CTGTTGATAAAGCTCAAACA+AGG - chr8_3:20061779-20061798 Msa1280990:intron 35.0%
CTATTACTCTGCCATTCAAT+TGG - chr8_3:20061823-20061842 Msa1280990:intron 35.0%
! AGCCTCTGAAAATAATGGTT+TGG - chr8_3:20061881-20061900 Msa1280990:intron 35.0%
ACAGAATCATCGTGATTTCT+GGG + chr8_3:20062001-20062020 None:intergenic 35.0%
AACAGAATCATCGTGATTTC+TGG + chr8_3:20062002-20062021 None:intergenic 35.0%
CAACTACAGGAAACAACAAA+AGG + chr8_3:20062064-20062083 None:intergenic 35.0%
TATTGACAGCTTCATCAAGT+TGG - chr8_3:20062126-20062145 Msa1280990:CDS 35.0%
TTGCTCCTGTAACTTATATG+TGG - chr8_3:20062169-20062188 Msa1280990:CDS 35.0%
! CTAGGTCTGTGATATTTTCT+TGG + chr8_3:20062206-20062225 None:intergenic 35.0%
CAAGAAAATATCACAGACCT+AGG - chr8_3:20062204-20062223 Msa1280990:CDS 35.0%
!!! TTTTTTCATCGCTAACACCT+AGG + chr8_3:20062224-20062243 None:intergenic 35.0%
! GTTGTTCTTTTAGACACCTT+TGG - chr8_3:20062292-20062311 Msa1280990:CDS 35.0%
! TTCTTATATTTGAGACCGGA+GGG + chr8_3:20062595-20062614 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + chr8_3:20062594-20062613 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr8_3:20062594-20062613 Msa1280990:CDS 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr8_3:20062595-20062614 Msa1280990:CDS 35.0%
AGTGAGTTCAATACTCAAGT+TGG - chr8_3:20062628-20062647 Msa1280990:CDS 35.0%
GATCACTTTGCCTATTTGAA+AGG - chr8_3:20062690-20062709 Msa1280990:intron 35.0%
TTGCCTATTTGAAAGGCTTA+TGG - chr8_3:20062697-20062716 Msa1280990:intron 35.0%
CATCCAAACATAAGCATGAT+TGG - chr8_3:20062727-20062746 Msa1280990:intron 35.0%
TAACGATTATTCCTTCTGGA+TGG - chr8_3:20062894-20062913 Msa1280990:intron 35.0%
! ATTTTGAACTACCATCCAGA+AGG + chr8_3:20062908-20062927 None:intergenic 35.0%
CAACAGGGAAATTAAAACCT+TGG + chr8_3:20063002-20063021 None:intergenic 35.0%
GATCATTTGTTCTTCTCTTG+AGG - chr8_3:20063138-20063157 Msa1280990:intron 35.0%
TAAGCAACAAACCTTCTAAC+AGG + chr8_3:20063229-20063248 None:intergenic 35.0%
GTATTTCAGAAAATCGTTGG+CGG - chr8_3:20063329-20063348 Msa1280990:CDS 35.0%
TTTACCTGTGAAAAAGACTG+TGG - chr8_3:20063477-20063496 Msa1280990:CDS 35.0%
ATAGATCATCAACATCAGAC+TGG + chr8_3:20063615-20063634 None:intergenic 35.0%
!! AGTCTGATGTTGATGATCTA+TGG - chr8_3:20063614-20063633 Msa1280990:CDS 35.0%
AGAATTTAACCATGCGTTCA+CGG + chr8_3:20063702-20063721 None:intergenic 35.0%
! TGCCTAGATGACATGAATTT+TGG - chr8_3:20063721-20063740 Msa1280990:intron 35.0%
! GCCTAGATGACATGAATTTT+GGG - chr8_3:20063722-20063741 Msa1280990:intron 35.0%
! CCTAGATGACATGAATTTTG+GGG - chr8_3:20063723-20063742 Msa1280990:intron 35.0%
TGATATGAAGGAATTGACCA+TGG - chr8_3:20063804-20063823 Msa1280990:CDS 35.0%
GATATGAAGGAATTGACCAT+GGG - chr8_3:20063805-20063824 Msa1280990:CDS 35.0%
ATATGAAGGAATTGACCATG+GGG - chr8_3:20063806-20063825 Msa1280990:CDS 35.0%
! AAGGCTTTAACCCAACTTAA+GGG + chr8_3:20064143-20064162 None:intergenic 35.0%
! ACTTTTCTCTTTATCCAGAC+GGG - chr8_3:20064321-20064340 Msa1280990:intron 35.0%
CTCAAATTTCTTACAGAAGG+AGG + chr8_3:20064444-20064463 None:intergenic 35.0%
CAACAAAGAGATTAGCACAA+TGG - chr8_3:20064506-20064525 Msa1280990:intron 35.0%
GTTTGACAAGGAATTAGCAT+TGG + chr8_3:20064565-20064584 None:intergenic 35.0%
!!! CTTGAAATTTTAGAGTCACC+AGG + chr8_3:20064594-20064613 None:intergenic 35.0%
CATTTGATGGAATTGTAGCA+AGG - chr8_3:20064631-20064650 Msa1280990:CDS 35.0%
TTATTTCCTTATGCAGCAGA+TGG - chr8_3:20064708-20064727 Msa1280990:CDS 35.0%
GAGAAATAATGCTTGATACG+AGG - chr8_3:20064760-20064779 Msa1280990:CDS 35.0%
CTCTTGCAAAACATAGCTTA+TGG + chr8_3:20064809-20064828 None:intergenic 35.0%
CAAAAAAGCCTTCCTTGAAT+GGG + chr8_3:20064842-20064861 None:intergenic 35.0%
TCAAAAAAGCCTTCCTTGAA+TGG + chr8_3:20064843-20064862 None:intergenic 35.0%
!!! AAGGAAGGCTTTTTTGAAGA+GGG - chr8_3:20064846-20064865 Msa1280990:intron 35.0%
TTTAATATTGCGTGGACCAT+TGG + chr8_3:20065149-20065168 None:intergenic 35.0%
TTCAGTCCTGTAAAATACGA+AGG + chr8_3:20065471-20065490 None:intergenic 35.0%
! TTAGTCGATTGGTCAATTGT+TGG - chr8_3:20065525-20065544 Msa1280990:CDS 35.0%
AGTTCAGTGAAAAGAGAAGT+GGG - chr8_3:20065727-20065746 Msa1280990:CDS 35.0%
TATCAGTATTCCCCATTTAC+CGG + chr8_3:20065803-20065822 None:intergenic 35.0%
TCTGTACATAGTTTATGCTC+AGG + chr8_3:20065943-20065962 None:intergenic 35.0%
!! TGTAACGGATCTTGATACTG+AGG - chr8_3:20060667-20060686 Msa1280990:intron 40.0%
CCAATGGCAGTTCAATATTG+TGG + chr8_3:20060768-20060787 None:intergenic 40.0%
CCACAATATTGAACTGCCAT+TGG - chr8_3:20060765-20060784 Msa1280990:exon 40.0%
CAATATTGAACTGCCATTGG+AGG - chr8_3:20060768-20060787 Msa1280990:exon 40.0%
AATTATAGAGGAGCCTCCAA+TGG + chr8_3:20060784-20060803 None:intergenic 40.0%
!!! GTTTAGTTGCTTTTGGACCA+TGG - chr8_3:20061003-20061022 Msa1280990:intron 40.0%
AGGAGAAAGAGGCAAAAACT+AGG - chr8_3:20061375-20061394 Msa1280990:intron 40.0%
TCAAGAGTAACCCTGAGAAT+GGG - chr8_3:20061481-20061500 Msa1280990:intron 40.0%
AAGAGCAAAACCCATTCTCA+GGG + chr8_3:20061494-20061513 None:intergenic 40.0%
!! AGAATGGGTTTTGCTCTTCT+GGG - chr8_3:20061496-20061515 Msa1280990:intron 40.0%
! GATTTTCCATGACCAAGTTG+TGG - chr8_3:20061562-20061581 Msa1280990:intron 40.0%
! TTTTCCATGACCAAGTTGTG+GGG - chr8_3:20061564-20061583 Msa1280990:intron 40.0%
TTACTCTGCCATTCAATTGG+AGG - chr8_3:20061826-20061845 Msa1280990:intron 40.0%
TACTCTGCCATTCAATTGGA+GGG - chr8_3:20061827-20061846 Msa1280990:intron 40.0%
!! TGTGTTACTTCTATGGGAGA+GGG + chr8_3:20061977-20061996 None:intergenic 40.0%
!! ATGTGTTACTTCTATGGGAG+AGG + chr8_3:20061978-20061997 None:intergenic 40.0%
!! CTGGGATGTGTTACTTCTAT+GGG + chr8_3:20061983-20062002 None:intergenic 40.0%
!! TCTGGGATGTGTTACTTCTA+TGG + chr8_3:20061984-20062003 None:intergenic 40.0%
CACGATGATTCTGTTCTTTC+TGG - chr8_3:20062007-20062026 Msa1280990:intron 40.0%
ATGAAAACATGTACTCCCTC+CGG - chr8_3:20062460-20062479 Msa1280990:CDS 40.0%
GAGCCATAAGCCTTTCAAAT+AGG + chr8_3:20062703-20062722 None:intergenic 40.0%
CTCCCAATCATGCTTATGTT+TGG + chr8_3:20062733-20062752 None:intergenic 40.0%
CAAACATAAGCATGATTGGG+AGG - chr8_3:20062731-20062750 Msa1280990:intron 40.0%
TGAGAAGCTAGTTACATGCA+TGG + chr8_3:20062818-20062837 None:intergenic 40.0%
TGAGGGTCAACTTGCAAAAT+TGG - chr8_3:20063156-20063175 Msa1280990:intron 40.0%
CTCTTACTGTTAAGGATCCT+CGG - chr8_3:20063452-20063471 Msa1280990:CDS 40.0%
TCTTACTGTTAAGGATCCTC+GGG - chr8_3:20063453-20063472 Msa1280990:CDS 40.0%
! TTTTTCACAGGTAAATCCCG+AGG + chr8_3:20063472-20063491 None:intergenic 40.0%
!! TTGCAAAGAGCTTGCTGATT+TGG - chr8_3:20063552-20063571 Msa1280990:CDS 40.0%
!! TGCAAAGAGCTTGCTGATTT+GGG - chr8_3:20063553-20063572 Msa1280990:CDS 40.0%
GGAAGACAATGTCCTTTCTA+TGG - chr8_3:20063669-20063688 Msa1280990:intron 40.0%
CCCCAAAATTCATGTCATCT+AGG + chr8_3:20063726-20063745 None:intergenic 40.0%
!! AGATGACATGAATTTTGGGG+AGG - chr8_3:20063726-20063745 Msa1280990:intron 40.0%
ATCAGTATTCAGGCAATGCA+AGG + chr8_3:20064033-20064052 None:intergenic 40.0%
! GAAGGCTTTAACCCAACTTA+AGG + chr8_3:20064144-20064163 None:intergenic 40.0%
! TAAGTTGGGTTAAAGCCTTC+TGG - chr8_3:20064144-20064163 Msa1280990:intron 40.0%
TGGATTCCACTTGTCTCTAA+TGG - chr8_3:20064164-20064183 Msa1280990:intron 40.0%
GGATTCCACTTGTCTCTAAT+GGG - chr8_3:20064165-20064184 Msa1280990:intron 40.0%
GATTCCACTTGTCTCTAATG+GGG - chr8_3:20064166-20064185 Msa1280990:intron 40.0%
! CTTTTCTCTTTATCCAGACG+GGG - chr8_3:20064322-20064341 Msa1280990:intron 40.0%
! ATTTTTCCCGCAAGATTTCC+CGG - chr8_3:20064350-20064369 Msa1280990:intron 40.0%
AGCTGCTGAATGTGATCAAA+AGG - chr8_3:20064407-20064426 Msa1280990:intron 40.0%
GTATTGTGAACAATACCCCA+AGG + chr8_3:20064483-20064502 None:intergenic 40.0%
!!! TTTTAGAGTCACCAGGACAA+GGG + chr8_3:20064587-20064606 None:intergenic 40.0%
!!! ATTTTAGAGTCACCAGGACA+AGG + chr8_3:20064588-20064607 None:intergenic 40.0%
! GACTCTGAGAATGCATTTGA+TGG - chr8_3:20064618-20064637 Msa1280990:CDS 40.0%
AGGAAATAACAGCAATCGAC+CGG + chr8_3:20064697-20064716 None:intergenic 40.0%
AGTTCATCTTCACCCATTCA+AGG - chr8_3:20064827-20064846 Msa1280990:CDS 40.0%
!!! CAAGGAAGGCTTTTTTGAAG+AGG - chr8_3:20064845-20064864 Msa1280990:intron 40.0%
AAAGATACGTCAGAAGGATG+TGG + chr8_3:20064888-20064907 None:intergenic 40.0%
ATCCTTCTGACGTATCTTTC+TGG - chr8_3:20064889-20064908 Msa1280990:intron 40.0%
ACGTATCTTTCTGGACTTCA+AGG - chr8_3:20064898-20064917 Msa1280990:intron 40.0%
ATATCTGATATGTGGGCCAA+TGG - chr8_3:20065130-20065149 Msa1280990:intron 40.0%
GTTGCACTATAGCAATTGCT+TGG - chr8_3:20065233-20065252 Msa1280990:intron 40.0%
! TTAGGTTGTAAATGTGGGGA+AGG - chr8_3:20065282-20065301 Msa1280990:intron 40.0%
TCCTGAATGCATCACATGAA+TGG + chr8_3:20065353-20065372 None:intergenic 40.0%
ATAGAAGTGGCAATATGGGT+TGG - chr8_3:20065669-20065688 Msa1280990:CDS 40.0%
CAGTTCAGTGAAAAGAGAAG+TGG - chr8_3:20065726-20065745 Msa1280990:CDS 40.0%
AAGAGAATTCCTCCGGTAAA+TGG - chr8_3:20065788-20065807 Msa1280990:CDS 40.0%
AGAGAATTCCTCCGGTAAAT+GGG - chr8_3:20065789-20065808 Msa1280990:CDS 40.0%
CAATTGATAGAGAGTCTCAC+CGG - chr8_3:20065833-20065852 Msa1280990:five_prime_UTR 40.0%
! TTGTGTTCAAGGAAGGTATG+AGG - chr8_3:20065882-20065901 Msa1280990:five_prime_UTR 40.0%
GCGAAATATACGTACTTGTC+AGG - chr8_3:20066110-20066129 Msa1280990:five_prime_UTR 40.0%
TGCTACAAATAGGGCTAAGT+TGG - chr8_3:20066251-20066270 Msa1280990:five_prime_UTR 40.0%
AATTGCGTGCGACTAATCTC+TGG - chr8_3:20060839-20060858 Msa1280990:CDS 45.0%
! CGACTAATCTCTGGTTGGTT+AGG - chr8_3:20060848-20060867 Msa1280990:CDS 45.0%
!!! TTCGGCACATTGATTTTGCG+AGG + chr8_3:20061216-20061235 None:intergenic 45.0%
!! TTGAAGGCTTTGAAGCTCAG+GGG + chr8_3:20061256-20061275 None:intergenic 45.0%
!! GTTGAAGGCTTTGAAGCTCA+GGG + chr8_3:20061257-20061276 None:intergenic 45.0%
TGTGCCCCTTTCTTGCAATT+TGG + chr8_3:20061356-20061375 None:intergenic 45.0%
! AAATTGCAAGAAAGGGGCAC+AGG - chr8_3:20061355-20061374 Msa1280990:intron 45.0%
TATCTTCGACGAACATGTCG+AGG + chr8_3:20061456-20061475 None:intergenic 45.0%
CTCAAGAGTAACCCTGAGAA+TGG - chr8_3:20061480-20061499 Msa1280990:intron 45.0%
GAAGAGCAAAACCCATTCTC+AGG + chr8_3:20061495-20061514 None:intergenic 45.0%
!! GAGAATGGGTTTTGCTCTTC+TGG - chr8_3:20061495-20061514 Msa1280990:intron 45.0%
!! GAATGGGTTTTGCTCTTCTG+GGG - chr8_3:20061497-20061516 Msa1280990:intron 45.0%
AACATGCGTTCTCAGTCTCT+TGG + chr8_3:20061529-20061548 None:intergenic 45.0%
AGAGACTGAGAACGCATGTT+TGG - chr8_3:20061529-20061548 Msa1280990:intron 45.0%
TATTCAGAGGGAAAGGTTCG+AGG - chr8_3:20061753-20061772 Msa1280990:intron 45.0%
ATTCAGAGGGAAAGGTTCGA+GGG - chr8_3:20061754-20061773 Msa1280990:intron 45.0%
AAAGCTCAAACAAGGTGTGC+TGG - chr8_3:20061787-20061806 Msa1280990:intron 45.0%
! GGCTCAGCCTCTGAAAATAA+TGG - chr8_3:20061876-20061895 Msa1280990:intron 45.0%
! GTTCTTTCTGGCACAACCTA+TGG - chr8_3:20062019-20062038 Msa1280990:intron 45.0%
CACAACCTATGGAACAGCAA+TGG - chr8_3:20062030-20062049 Msa1280990:intron 45.0%
! AGTCACCATTGCTGTTCCAT+AGG + chr8_3:20062038-20062057 None:intergenic 45.0%
GGACGCCACATATAAGTTAC+AGG + chr8_3:20062177-20062196 None:intergenic 45.0%
! CTTTTAGACACCTTTGGGTG+TGG - chr8_3:20062298-20062317 Msa1280990:CDS 45.0%
AAGCATGTATCCACACCCAA+AGG + chr8_3:20062311-20062330 None:intergenic 45.0%
! CATGCTTCTGCCTTTGAAGA+AGG - chr8_3:20062324-20062343 Msa1280990:CDS 45.0%
! AAAACTGGCCTGCAAGAAAG+AGG - chr8_3:20062359-20062378 Msa1280990:CDS 45.0%
AGAGTGAACCTCTTTCTTGC+AGG + chr8_3:20062370-20062389 None:intergenic 45.0%
ACATAAGCATGATTGGGAGG+TGG - chr8_3:20062734-20062753 Msa1280990:intron 45.0%
CATAAGCATGATTGGGAGGT+GGG - chr8_3:20062735-20062754 Msa1280990:intron 45.0%
! CACGCAAACATCAGCCATTT+TGG + chr8_3:20063306-20063325 None:intergenic 45.0%
!! GGAACCACAGTCTTTTTCAC+AGG + chr8_3:20063484-20063503 None:intergenic 45.0%
!! AAAGAGCTTGCTGATTTGGG+AGG - chr8_3:20063556-20063575 Msa1280990:CDS 45.0%
!! TGCTGATTTGGGAGGAATGT+TGG - chr8_3:20063564-20063583 Msa1280990:CDS 45.0%
CTATGGTATGCTACAACCAG+AGG - chr8_3:20063631-20063650 Msa1280990:CDS 45.0%
GAAAGGACATTGTCTTCCAC+CGG + chr8_3:20063667-20063686 None:intergenic 45.0%
! AGATCTTGAGCACTGCTCTT+TGG + chr8_3:20063761-20063780 None:intergenic 45.0%
AGAGACAAGTGGAATCCAGA+AGG + chr8_3:20064162-20064181 None:intergenic 45.0%
TCTAATGGGGCACATGCAAT+AGG - chr8_3:20064179-20064198 Msa1280990:intron 45.0%
GGGAAATCTTGCGGGAAAAA+TGG + chr8_3:20064351-20064370 None:intergenic 45.0%
TTGCAATCCGGGAAATCTTG+CGG + chr8_3:20064360-20064379 None:intergenic 45.0%
TTGTGAACAATACCCCAAGG+AGG + chr8_3:20064480-20064499 None:intergenic 45.0%
AGACTCTTGACCTTTCAGCT+AGG - chr8_3:20064529-20064548 Msa1280990:intron 45.0%
GACTCTTGACCTTTCAGCTA+GGG - chr8_3:20064530-20064549 Msa1280990:intron 45.0%
TCAAATCCTCCCTAGCTGAA+AGG + chr8_3:20064542-20064561 None:intergenic 45.0%
GATGGAATTGTAGCAAGGAC+AGG - chr8_3:20064636-20064655 Msa1280990:CDS 45.0%
!! TAACAGCAATCGACCGGTTT+TGG + chr8_3:20064691-20064710 None:intergenic 45.0%
TCCTTATGCAGCAGATGGAA+TGG - chr8_3:20064713-20064732 Msa1280990:CDS 45.0%
CATCTTCACCCATTCAAGGA+AGG - chr8_3:20064831-20064850 Msa1280990:CDS 45.0%
GTCCAGAAAGATACGTCAGA+AGG + chr8_3:20064894-20064913 None:intergenic 45.0%
ACACAGGACAACGAATCCTA+GGG + chr8_3:20065087-20065106 None:intergenic 45.0%
!! CACCACAGAAGCTTGCTATT+GGG - chr8_3:20065189-20065208 Msa1280990:CDS 45.0%
ACGCAAAACTAACGTGCAAG+AGG + chr8_3:20065215-20065234 None:intergenic 45.0%
GCCATTCATGTGATGCATTC+AGG - chr8_3:20065349-20065368 Msa1280990:intron 45.0%
TCTAAAGATAGAGGGGAAGC+CGG + chr8_3:20065435-20065454 None:intergenic 45.0%
!! AAGTGGCAATATGGGTTGGT+CGG - chr8_3:20065673-20065692 Msa1280990:CDS 45.0%
GAGAATTCCTCCGGTAAATG+GGG - chr8_3:20065790-20065809 Msa1280990:CDS 45.0%
TAACAAAGCCAATAGGCCAC+CGG + chr8_3:20065855-20065874 None:intergenic 45.0%
GCTGACGTAACAAAGCCAAT+AGG + chr8_3:20065862-20065881 None:intergenic 45.0%
GTTACGTCAGCTTGTGTTCA+AGG - chr8_3:20065871-20065890 Msa1280990:five_prime_UTR 45.0%
TGCTGCAATGACATTGCACA+CGG + chr8_3:20065997-20066016 None:intergenic 45.0%
TGCAATGTCATTGCAGCAAG+AGG - chr8_3:20065999-20066018 Msa1280990:five_prime_UTR 45.0%
CTCAGTTAAGAGAGGAACAG+TGG - chr8_3:20066059-20066078 Msa1280990:five_prime_UTR 45.0%
GTTAAGAGAGGAACAGTGGA+AGG - chr8_3:20066063-20066082 Msa1280990:five_prime_UTR 45.0%
ATTGTGGCCGCAATTGCTGT+TGG - chr8_3:20060740-20060759 Msa1280990:intron 50.0%
! TTGTGGCCGCAATTGCTGTT+GGG - chr8_3:20060741-20060760 Msa1280990:intron 50.0%
TGTGGTCCCAACAGCAATTG+CGG + chr8_3:20060750-20060769 None:intergenic 50.0%
!! GCTATGGGTGCTGAACCTTT+AGG + chr8_3:20061186-20061205 None:intergenic 50.0%
!!! GGCACATTGATTTTGCGAGG+TGG + chr8_3:20061213-20061232 None:intergenic 50.0%
GCACGGGATTCTGCAAACTT+CGG + chr8_3:20061234-20061253 None:intergenic 50.0%
!! CGTTGAAGGCTTTGAAGCTC+AGG + chr8_3:20061258-20061277 None:intergenic 50.0%
GTAACCCCACAACTTGGTCA+TGG + chr8_3:20061571-20061590 None:intergenic 50.0%
AAGGTGGTAACCCCACAACT+TGG + chr8_3:20061577-20061596 None:intergenic 50.0%
TTCCTTGAAGACCCAGAGGA+AGG + chr8_3:20061596-20061615 None:intergenic 50.0%
TTCCTCTGGGTCTTCAAGGA+AGG - chr8_3:20061595-20061614 Msa1280990:intron 50.0%
TACCTTCCTTGAAGACCCAG+AGG + chr8_3:20061600-20061619 None:intergenic 50.0%
TCTGGGTCTTCAAGGAAGGT+AGG - chr8_3:20061599-20061618 Msa1280990:intron 50.0%
CTCTGGACCCTCCAATTGAA+TGG + chr8_3:20061837-20061856 None:intergenic 50.0%
CATTCAATTGGAGGGTCCAG+AGG - chr8_3:20061835-20061854 Msa1280990:intron 50.0%
!! GCTTCATCAAGTTGGAGCAC+CGG - chr8_3:20062134-20062153 Msa1280990:CDS 50.0%
GGAGCAATTGCCTGAGAAAC+CGG + chr8_3:20062156-20062175 None:intergenic 50.0%
! TCACTAGCTTCTACTCCCTC+CGG + chr8_3:20062613-20062632 None:intergenic 50.0%
CACGGTGCTTCTCCATAGAA+AGG + chr8_3:20063684-20063703 None:intergenic 50.0%
TGTGCCCCATTAGAGACAAG+TGG + chr8_3:20064173-20064192 None:intergenic 50.0%
TAGGTTTGCGAGAGAAGCAG+TGG - chr8_3:20064198-20064217 Msa1280990:intron 50.0%
GGAAAAATGGTATCCCCGTC+TGG + chr8_3:20064338-20064357 None:intergenic 50.0%
TGCAATCCGGGAAATCTTGC+GGG + chr8_3:20064359-20064378 None:intergenic 50.0%
GCAAGATTTCCCGGATTGCA+AGG - chr8_3:20064359-20064378 Msa1280990:intron 50.0%
GTGAGTATGCCTTGCAATCC+GGG + chr8_3:20064371-20064390 None:intergenic 50.0%
CGTGAGTATGCCTTGCAATC+CGG + chr8_3:20064372-20064391 None:intergenic 50.0%
CAAGGCATACTCACGCTTCA+TGG - chr8_3:20064377-20064396 Msa1280990:intron 50.0%
TCTTGACCTTTCAGCTAGGG+AGG - chr8_3:20064533-20064552 Msa1280990:intron 50.0%
TCCTTGTCAAACCCTTGTCC+TGG - chr8_3:20064573-20064592 Msa1280990:intron 50.0%
ACCAGGACAAGGGTTTGACA+AGG + chr8_3:20064577-20064596 None:intergenic 50.0%
GCCATTCCATCTGCTGCATA+AGG + chr8_3:20064717-20064736 None:intergenic 50.0%
! GGCAGCTAGTGTTTTACCCT+AGG - chr8_3:20065068-20065087 Msa1280990:intron 50.0%
CACACAGGACAACGAATCCT+AGG + chr8_3:20065088-20065107 None:intergenic 50.0%
CCAATAGCAAGCTTCTGTGG+TGG + chr8_3:20065191-20065210 None:intergenic 50.0%
!! CCACCACAGAAGCTTGCTAT+TGG - chr8_3:20065188-20065207 Msa1280990:CDS 50.0%
TGACAGGGCTGTTAGTCGAT+TGG - chr8_3:20065514-20065533 Msa1280990:CDS 50.0%
CAGTATTCCCCATTTACCGG+AGG + chr8_3:20065800-20065819 None:intergenic 50.0%
TTGATAGAGAGTCTCACCGG+TGG - chr8_3:20065836-20065855 Msa1280990:five_prime_UTR 50.0%
CGTCAGCTTGTGTTCAAGGA+AGG - chr8_3:20065875-20065894 Msa1280990:five_prime_UTR 50.0%
! TGCAGCAGAGGGATTTTGTG+AGG - chr8_3:20066024-20066043 Msa1280990:five_prime_UTR 50.0%
TTCGCTCCTTCTCTGCTTCA+CGG + chr8_3:20066095-20066114 None:intergenic 50.0%
GCGTGCGACTAATCTCTGGT+TGG - chr8_3:20060843-20060862 Msa1280990:CDS 55.0%
! GAAAGGGGCACAGGAGAAAG+AGG - chr8_3:20061364-20061383 Msa1280990:intron 55.0%
!! GGGTTTTGCTCTTCTGGGGA+TGG - chr8_3:20061501-20061520 Msa1280990:intron 55.0%
TGGGGTTACCACCTTCCTCT+GGG - chr8_3:20061582-20061601 Msa1280990:intron 55.0%
CTTGAAGACCCAGAGGAAGG+TGG + chr8_3:20061593-20061612 None:intergenic 55.0%
CACCTTCCTCTGGGTCTTCA+AGG - chr8_3:20061591-20061610 Msa1280990:intron 55.0%
!! AGTTGGAGCACCGGTTTCTC+AGG - chr8_3:20062143-20062162 Msa1280990:CDS 55.0%
AACCAGAGGCTTGAAGCCTC+CGG - chr8_3:20063645-20063664 Msa1280990:intron 55.0%
AGGACATTGTCTTCCACCGG+AGG + chr8_3:20063664-20063683 None:intergenic 55.0%
AGTTCCCATCCTGCCTCCTT+GGG - chr8_3:20064464-20064483 Msa1280990:intron 55.0%
ATACCCCAAGGAGGCAGGAT+GGG + chr8_3:20064471-20064490 None:intergenic 55.0%
AATACCCCAAGGAGGCAGGA+TGG + chr8_3:20064472-20064491 None:intergenic 55.0%
GAACAATACCCCAAGGAGGC+AGG + chr8_3:20064476-20064495 None:intergenic 55.0%
GGCCCAATAGCAAGCTTCTG+TGG + chr8_3:20065194-20065213 None:intergenic 55.0%
AGCAAGAGGCTTGCAGCAGA+GGG - chr8_3:20066013-20066032 Msa1280990:five_prime_UTR 55.0%
AGATGCCCGTGAAGCAGAGA+AGG - chr8_3:20066086-20066105 Msa1280990:five_prime_UTR 55.0%
TCGCTCCTTCTCTGCTTCAC+GGG + chr8_3:20066094-20066113 None:intergenic 55.0%
TTGCGAGGTGGCGCTGCTAT+GGG + chr8_3:20061201-20061220 None:intergenic 60.0%
TTTGCGAGGTGGCGCTGCTA+TGG + chr8_3:20061202-20061221 None:intergenic 60.0%
!! GCTTTGAAGCTCAGGGGCAC+GGG + chr8_3:20061250-20061269 None:intergenic 60.0%
!! GGCTTTGAAGCTCAGGGGCA+CGG + chr8_3:20061251-20061270 None:intergenic 60.0%
GTGGGGTTACCACCTTCCTC+TGG - chr8_3:20061581-20061600 Msa1280990:intron 60.0%
!! GGAGAAGCACCGTGAACGCA+TGG - chr8_3:20063690-20063709 Msa1280990:intron 60.0%
GAGTTCCCATCCTGCCTCCT+TGG - chr8_3:20064463-20064482 Msa1280990:intron 60.0%
GTTCCCATCCTGCCTCCTTG+GGG - chr8_3:20064465-20064484 Msa1280990:intron 60.0%
GAGTCTCACCGGTGGCCTAT+TGG - chr8_3:20065844-20065863 Msa1280990:five_prime_UTR 60.0%
CAGCAAGAGGCTTGCAGCAG+AGG - chr8_3:20066012-20066031 Msa1280990:five_prime_UTR 60.0%
CACCGGAGGCTTCAAGCCTC+TGG + chr8_3:20063650-20063669 None:intergenic 65.0%
CAGAGGCTTGAAGCCTCCGG+TGG - chr8_3:20063648-20063667 Msa1280990:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 20060626 20066362 20060626 ID=Msa1280990;Name=Msa1280990
chr8_3 mRNA 20060626 20066362 20060626 ID=Msa1280990-mRNA-1;Parent=Msa1280990;Name=Msa1280990-mRNA-1;_AED=0.07;_eAED=0.07;_QI=533|1|1|1|0.9|0.81|11|78|862
chr8_3 exon 20060626 20060677 20060626 ID=Msa1280990-mRNA-1:exon:7409;Parent=Msa1280990-mRNA-1
chr8_3 exon 20060749 20060973 20060749 ID=Msa1280990-mRNA-1:exon:7408;Parent=Msa1280990-mRNA-1
chr8_3 exon 20061092 20061259 20061092 ID=Msa1280990-mRNA-1:exon:7407;Parent=Msa1280990-mRNA-1
chr8_3 exon 20062069 20062649 20062069 ID=Msa1280990-mRNA-1:exon:7406;Parent=Msa1280990-mRNA-1
chr8_3 exon 20062756 20062864 20062756 ID=Msa1280990-mRNA-1:exon:7405;Parent=Msa1280990-mRNA-1
chr8_3 exon 20063161 20063658 20063161 ID=Msa1280990-mRNA-1:exon:7404;Parent=Msa1280990-mRNA-1
chr8_3 exon 20063752 20063870 20063752 ID=Msa1280990-mRNA-1:exon:7403;Parent=Msa1280990-mRNA-1
chr8_3 exon 20064608 20064853 20064608 ID=Msa1280990-mRNA-1:exon:7402;Parent=Msa1280990-mRNA-1
chr8_3 exon 20064937 20065050 20064937 ID=Msa1280990-mRNA-1:exon:7401;Parent=Msa1280990-mRNA-1
chr8_3 exon 20065132 20065228 20065132 ID=Msa1280990-mRNA-1:exon:7400;Parent=Msa1280990-mRNA-1
chr8_3 exon 20065372 20066362 20065372 ID=Msa1280990-mRNA-1:exon:7399;Parent=Msa1280990-mRNA-1
chr8_3 five_prime_UTR 20065830 20066362 20065830 ID=Msa1280990-mRNA-1:five_prime_utr;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20065372 20065829 20065372 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20065132 20065228 20065132 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20064937 20065050 20064937 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20064608 20064853 20064608 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20063752 20063870 20063752 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20063161 20063658 20063161 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20062756 20062864 20062756 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20062069 20062649 20062069 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20061092 20061259 20061092 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 CDS 20060775 20060973 20060775 ID=Msa1280990-mRNA-1:cds;Parent=Msa1280990-mRNA-1
chr8_3 three_prime_UTR 20060749 20060774 20060749 ID=Msa1280990-mRNA-1:three_prime_utr;Parent=Msa1280990-mRNA-1
chr8_3 three_prime_UTR 20060626 20060677 20060626 ID=Msa1280990-mRNA-1:three_prime_utr;Parent=Msa1280990-mRNA-1
Gene Sequence

>Msa1280990

ATGGTTACTGACGTAACTAAAAAGCCTAAAGGTTCAGCACCCATAGCAGCGCCACCTCGCAAAATCAATGTGCCGAAGTTTGCAGAATCCCGTGCCCCTGAGCTTCAAAGCCTTCAACGTATCGTTGAAAATAGATTAAGCAATGATTATAAGTCTCAAAGGAACAAGAGAAGAAGAACAACATCATTTAATGACCAAATTGCAAGAAAGGGGCACAGGAGAAAGAGGCAAAAACTAGGAAAAGTTGATAAAGTCAATGCTGAATCAGTTTTGAAGGACAAAATAACACAGCTTCCTCGACATGTTCGTCGAAGATATGAACTCAAGAGTAACCCTGAGAATGGGTTTTGCTCTTCTGGGGATGGAACCAAGAGACTGAGAACGCATGTTTGGCATGCAAAACGATTTTCCATGACCAAGTTGTGGGGTTACCACCTTCCTCTGGGTCTTCAAGGAAGAGGGAAAGGTTCGAGGGCGCTGTTGATAAAGCTCAAACAAGGTGTGCTGGCACATGATGCAAGCTATTACTCTGCCATTCAATTGGAGGGTCCAGAGGATTCATTACTTTCAATATTAAGAATGATACTTGTGCCCTCTCCCATAGAAGTAACACATCCCAGAAATCACGATGATTCTGTTCTTTCTGGCACAACCTATGGAACAGCAATGCTTCATCAAGTTGGAGCACCGGTTTCTCAGGCAATTGCTCCTGTAACTTATATGTGGCGTCCAACTTTCCAAGAAAATATCACAGACCTAGGTGTTAGCGATGAAAAAATTATTCCTGATGTTGATTTATGTGACAAATCAGAAAGAATGGAGTGTAGTTGTTCTTTTAGACACCTTTGGGTGTGGATACATGCTTCTGCCTTTGAAGAAGGATATGCTAATCTAAAACTGGCCTGCAAGAAAGAGATGGAAAAGAGAGGCATCTCGATCATTTGTTCTTCTCTTGAGGGTCAACTTGCAAAATTGGAATTAGTTGGATCAGGGACATTTCAACTTCTTCAGAAAATATTAAATCCTGTTAGAAGTATTTCAGAAAATCGTTGGCGGTTGAAGAAACACGTGACTACAGAAGAAAACCATGTTTCTCAAAATACAGAGTCTTCCATACTGAAAAATGAAGAGCATTTTTCTTGTCGTGCAATGTTATCTCTTACTGTTAAGGATCCTCGGGATTTACCTGTGAAAAAGACTGTGGTTCCAATAGAGCCGATTTCAATTAAGGCTCTAAGTGATGCACAAGAAACTAGTTGCAAAGAGCTTGCTGATTTGGGAGGAATGTTGGAAAAGAGTAAAGATTTTGGAGACAACCAGTCTGATGTTGATGATCTATGGTATGCTACAACCAGAGGCTTGAAGCCTCCGGTGGAAGACAATGTCCTTTCTATGGAGAAGCACCGTGAACGCATGGTTAAATTCTGCCTAGATGACATGAATTTTGGGGAGGCGAATTCTTCCAAAGAGCAGTGCTCAAGATCTTGCCCTATTCTTCTTTTAAAAAATGATATGAAGGAATTGACCATGGGATGGTCTATTATACTTCCCTTAAGTTGGGTTAAAGCCTTCTGGATTCCACTTGTCTCTAATGGGGCACATGCAATAGGTTTGCGAGAGAAGCAGTGGATTGCATCTGATACGGGGATACCATTTTTCCCGCAAGATTTCCCGGATTGCAAGGCATACTCACGCTTCATGGCTGCTAAAGCTGCTGAATGTGATCAAAAGGAAGAACTTCGTCCTCCTTCTGTAAGAAATTTGAGAGTTCCCATCCTGCCTCCTTGGGGTATTGTTCACAATACTTTCAACAAAGAGATTAGCACAATGGAGACTCTTGACCTTTCAGCTAGGGAGGATTTGACCAATGCTAATTCCTTGTCAAACCCTTGTCCTGGTGACTCTAAAATTTCAAGTTTCGACTCTGAGAATGCATTTGATGGAATTGTAGCAAGGACAGGTTGTATGCTGACTACTTTACTTGATGAAACCAAAACCGGTCGATTGCTGTTATTTCCTTATGCAGCAGATGGAATGGCCAGAATCTCTAAGTTTATTAAAGGAGAAATAATGCTTGATACGAGGCATAAAAACTCTGTCATTTATGACCATAAGCTATGTTTTGCAAGAGTTCATCTTCACCCATTCAAGGAAGGCTTTTTTGAAGAGGGTGCAGTTATTTGTGCGCCACATCCTTCTGACGTATCTTTCTGGACTTCAAGTTCAGTGAAAAGAGAAGTGGGACTTAAACTGTCTGAGTCTGCTATGCGTTCATATTTCAAAGAGAATTCCTCCGGTAAATGGGGAATACTGATACCAGATGATTCAATTGATAGAGAGTCTCACCGGTGGCCTATTGGCTTTGTTACGTCAGCTTGTGTTCAAGGAAGCAAGAGGCTTGCAGCAGAGGGATTTTGTGAGGCAGTTTTACTATCTCAGTTAAGAGAGGAACAGTGGAAGGAGATGCCCGTGAAGCAGAGAAGGAGCGAAATATACGTACTTGTCAGGAATTTAAGATCTGTTGCGTATAGGCTAGCTCTAGCTTCTATTGTCCTAGAATATCAGGAAAATGACACTGAGTTCTTGTAA
Protein sequence

>Msa1280990

MVTDVTKKPKGSAPIAAPPRKINVPKFAESRAPELQSLQRIVENRLSNDYKSQRNKRRRTTSFNDQIARKGHRRKRQKLGKVDKVNAESVLKDKITQLPRHVRRRYELKSNPENGFCSSGDGTKRLRTHVWHAKRFSMTKLWGYHLPLGLQGRGKGSRALLIKLKQGVLAHDASYYSAIQLEGPEDSLLSILRMILVPSPIEVTHPRNHDDSVLSGTTYGTAMLHQVGAPVSQAIAPVTYMWRPTFQENITDLGVSDEKIIPDVDLCDKSERMECSCSFRHLWVWIHASAFEEGYANLKLACKKEMEKRGISIICSSLEGQLAKLELVGSGTFQLLQKILNPVRSISENRWRLKKHVTTEENHVSQNTESSILKNEEHFSCRAMLSLTVKDPRDLPVKKTVVPIEPISIKALSDAQETSCKELADLGGMLEKSKDFGDNQSDVDDLWYATTRGLKPPVEDNVLSMEKHRERMVKFCLDDMNFGEANSSKEQCSRSCPILLLKNDMKELTMGWSIILPLSWVKAFWIPLVSNGAHAIGLREKQWIASDTGIPFFPQDFPDCKAYSRFMAAKAAECDQKEELRPPSVRNLRVPILPPWGIVHNTFNKEISTMETLDLSAREDLTNANSLSNPCPGDSKISSFDSENAFDGIVARTGCMLTTLLDETKTGRLLLFPYAADGMARISKFIKGEIMLDTRHKNSVIYDHKLCFARVHLHPFKEGFFEEGAVICAPHPSDVSFWTSSSVKREVGLKLSESAMRSYFKENSSGKWGILIPDDSIDRESHRWPIGFVTSACVQGSKRLAAEGFCEAVLLSQLREEQWKEMPVKQRRSEIYVLVRNLRSVAYRLALASIVLEYQENDTEFL*