Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283150 | sp|Q94BZ1|ZIFL1_ARATH | 52.941 | 493 | 209 | 6 | 4 | 490 | 3 | 478 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283150 | A0A072TNX0 | 87.928 | 497 | 50 | 3 | 1 | 497 | 1 | 487 | 0.0 | 865 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0138220 | Msa1283150 | 0.810337 | 1.211709e-50 | -8.615850e-47 |
| Msa0183410 | Msa1283150 | 0.816642 | 4.977920e-52 | -8.615850e-47 |
| Msa1241990 | Msa1283150 | 0.912423 | 1.980804e-83 | -8.615850e-47 |
| Msa1283150 | Msa1322400 | 0.936035 | 3.302370e-97 | -8.615850e-47 |
| Msa1187780 | Msa1283150 | 0.920533 | 1.134734e-87 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283150 | MtrunA17_Chr8g0354831 | 87.928 | 497 | 50 | 3 | 1 | 497 | 1 | 487 | 0.0 | 865 |
| Msa1283150 | MtrunA17_Chr8g0354841 | 73.185 | 496 | 110 | 5 | 7 | 497 | 3 | 480 | 0.0 | 735 |
| Msa1283150 | MtrunA17_Chr8g0354851 | 70.291 | 515 | 111 | 6 | 7 | 497 | 3 | 499 | 0.0 | 715 |
| Msa1283150 | MtrunA17_Chr8g0354891 | 73.239 | 497 | 120 | 4 | 1 | 497 | 1 | 484 | 0.0 | 714 |
| Msa1283150 | MtrunA17_Chr3g0080421 | 64.859 | 498 | 163 | 5 | 1 | 497 | 1 | 487 | 0.0 | 654 |
| Msa1283150 | MtrunA17_Chr3g0080431 | 58.642 | 486 | 188 | 3 | 4 | 489 | 2 | 474 | 0.0 | 565 |
| Msa1283150 | MtrunA17_Chr8g0364441 | 53.693 | 501 | 143 | 8 | 1 | 461 | 1 | 452 | 1.00e-174 | 499 |
| Msa1283150 | MtrunA17_Chr8g0354861 | 67.405 | 316 | 80 | 5 | 151 | 461 | 6 | 303 | 1.22e-140 | 407 |
| Msa1283150 | MtrunA17_Chr3g0123421 | 71.282 | 195 | 55 | 1 | 1 | 195 | 1 | 194 | 1.61e-93 | 283 |
| Msa1283150 | MtrunA17_Chr3g0123441 | 72.174 | 115 | 32 | 0 | 351 | 465 | 1 | 115 | 2.10e-53 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283150 | AT5G13750.1 | 52.941 | 493 | 209 | 6 | 4 | 490 | 3 | 478 | 0.0 | 518 |
| Msa1283150 | AT3G43790.1 | 49.290 | 493 | 227 | 6 | 1 | 487 | 1 | 476 | 4.16e-168 | 483 |
| Msa1283150 | AT3G43790.4 | 49.290 | 493 | 227 | 6 | 1 | 487 | 1 | 476 | 4.16e-168 | 483 |
| Msa1283150 | AT5G13740.1 | 49.405 | 504 | 218 | 5 | 4 | 490 | 3 | 486 | 8.79e-167 | 480 |
| Msa1283150 | AT3G43790.2 | 48.697 | 499 | 227 | 7 | 1 | 487 | 1 | 482 | 1.50e-165 | 477 |
| Msa1283150 | AT3G43790.3 | 48.697 | 499 | 227 | 7 | 1 | 487 | 1 | 482 | 1.50e-165 | 477 |
| Msa1283150 | AT5G13740.2 | 49.348 | 460 | 196 | 5 | 4 | 446 | 3 | 442 | 5.58e-150 | 436 |
| Msa1283150 | AT5G13750.3 | 49.531 | 426 | 192 | 6 | 4 | 423 | 3 | 411 | 8.64e-142 | 414 |
| Msa1283150 | AT5G13750.4 | 49.531 | 426 | 192 | 6 | 4 | 423 | 3 | 411 | 8.64e-142 | 414 |
| Msa1283150 | AT5G13750.2 | 51.471 | 408 | 176 | 5 | 89 | 490 | 1 | 392 | 1.40e-141 | 412 |
| Msa1283150 | AT3G43790.5 | 47.393 | 422 | 199 | 6 | 1 | 416 | 1 | 405 | 1.12e-131 | 388 |
Find 132 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTGTTAGTCCTCTAAATT+TGG | 0.111977 | 8_3:+24527546 | Msa1283150:CDS |
| GAACTTTGACATCTGTATTA+TGG | 0.179763 | 8_3:+24525751 | Msa1283150:CDS |
| GGTATAGTATCATAAATAAA+AGG | 0.214410 | 8_3:+24524170 | Msa1283150:five_prime_UTR |
| TGTTATCACAAGATTTCTTT+TGG | 0.235759 | 8_3:+24526008 | Msa1283150:CDS |
| AAAAGAAATTGTACCTTTAC+TGG | 0.246053 | 8_3:-24526054 | None:intergenic |
| GTATCACAGGGTCATTATTT+AGG | 0.250113 | 8_3:+24529619 | Msa1283150:three_prime_UTR |
| CCACTGCTCGGTTCTGTAAA+AGG | 0.259682 | 8_3:-24528130 | None:intergenic |
| AAATAACTGCATTGTCCTTC+TGG | 0.260368 | 8_3:+24529826 | Msa1283150:three_prime_UTR |
| ACCAGCATTGGGAGGCTATT+TGG | 0.277904 | 8_3:+24526556 | Msa1283150:CDS |
| ATCAAATTTATATTAATAGA+AGG | 0.285747 | 8_3:-24529980 | None:intergenic |
| AGCTATTGTGCTCCTCTTAT+TGG | 0.291675 | 8_3:+24529767 | Msa1283150:three_prime_UTR |
| CTTAATTTGGTTGAAGGACT+TGG | 0.297066 | 8_3:+24529501 | Msa1283150:CDS |
| GATGCTGAAGCTATAGAAAA+TGG | 0.297671 | 8_3:+24527302 | Msa1283150:CDS |
| AACTTTGACATCTGTATTAT+GGG | 0.312954 | 8_3:+24525752 | Msa1283150:CDS |
| TCTGTTAGTCCTCTAAATTT+GGG | 0.313936 | 8_3:+24527547 | Msa1283150:CDS |
| ATGAAAACCTCTTGATGAAT+TGG | 0.315223 | 8_3:+24527363 | Msa1283150:CDS |
| TTCCATTAGCTGCTCCTCTT+TGG | 0.329427 | 8_3:-24528301 | None:intergenic |
| TTGCCCTGCTTCATAATATC+AGG | 0.334714 | 8_3:+24527117 | Msa1283150:CDS |
| GGTAATGTTCTTGCAATTAC+AGG | 0.337198 | 8_3:+24527598 | Msa1283150:CDS |
| TAGGGACTTATCCTCTAATC+TGG | 0.339960 | 8_3:+24530020 | Msa1283150:three_prime_UTR |
| CAAGTCCTTCAACCAAATTA+AGG | 0.346986 | 8_3:-24529500 | None:intergenic |
| TATTGCCTGCTTGTGGATTC+CGG | 0.349430 | 8_3:+24527158 | Msa1283150:CDS |
| TTCTTCCTTAATTTGGTTGA+AGG | 0.351724 | 8_3:+24529495 | Msa1283150:CDS |
| GTAAGTGCAGCTTGGGGAAC+AGG | 0.372551 | 8_3:+24526521 | Msa1283150:CDS |
| GGAACTTTAAATGGTGCAAT+TGG | 0.374218 | 8_3:+24526030 | Msa1283150:CDS |
| AAAACACCAATGACTATAAC+AGG | 0.374710 | 8_3:-24525804 | None:intergenic |
| AGCAATGATAGATGACATAA+AGG | 0.379944 | 8_3:-24527387 | None:intergenic |
| AAGTTGAAACAAATTTATAA+AGG | 0.382132 | 8_3:-24529855 | None:intergenic |
| CTGATATCAGACAACTTTGC+AGG | 0.382753 | 8_3:+24529587 | Msa1283150:exon |
| ATAAACTCACCATGAAATAA+AGG | 0.383235 | 8_3:-24525268 | None:intergenic |
| CAAGGATTGTCCTGGTTGTA+AGG | 0.386628 | 8_3:+24524298 | Msa1283150:CDS |
| TGGGGAACAGGTTTAATCAT+TGG | 0.389285 | 8_3:+24526533 | Msa1283150:CDS |
| CGAAAACCTGTTATAGTCAT+TGG | 0.412171 | 8_3:+24525798 | Msa1283150:CDS |
| GTGATTCGAGCAATGTTAAC+AGG | 0.415919 | 8_3:-24527763 | None:intergenic |
| ATCAAACCGATGATACTTAC+CGG | 0.420492 | 8_3:-24527177 | None:intergenic |
| ATGTCTCTATTCAAAGCTAT+TGG | 0.422437 | 8_3:+24528338 | Msa1283150:CDS |
| ATGTCCCCAAGCACAATTGT+AGG | 0.422522 | 8_3:+24530001 | Msa1283150:three_prime_UTR |
| TATAGTCCTACCCAGATTAG+AGG | 0.423673 | 8_3:-24530031 | None:intergenic |
| CACCAAAGAGGAGCAGCTAA+TGG | 0.424168 | 8_3:+24528299 | Msa1283150:CDS |
| AAGCAAATGAAAAGCTATAG+AGG | 0.424418 | 8_3:+24529716 | Msa1283150:three_prime_UTR |
| AGAGTTCATTGAGAAACTCT+TGG | 0.444244 | 8_3:-24524114 | None:intergenic |
| GCCAAATAGCCTCCCAATGC+TGG | 0.444343 | 8_3:-24526557 | None:intergenic |
| AAGTCCCTACAATTGTGCTT+GGG | 0.446665 | 8_3:-24530006 | None:intergenic |
| TTAATCATTGGACCAGCATT+GGG | 0.448070 | 8_3:+24526545 | Msa1283150:CDS |
| TATAGAAAATGGAAGCATAA+AGG | 0.454633 | 8_3:+24527313 | Msa1283150:CDS |
| CCCTTCATAGCAATGTTGTC+AGG | 0.454765 | 8_3:+24527909 | Msa1283150:CDS |
| TTTAATCATTGGACCAGCAT+TGG | 0.458138 | 8_3:+24526544 | Msa1283150:CDS |
| AACTCCTGATATTATGAAGC+AGG | 0.459270 | 8_3:-24527121 | None:intergenic |
| TTTAACTGCAGGCACTCATA+TGG | 0.463502 | 8_3:+24529467 | Msa1283150:intron |
| GTTAACATTGCTCGAATCAC+AGG | 0.464230 | 8_3:+24527766 | Msa1283150:CDS |
| CAGGAGTTATGTAGTATCAC+AGG | 0.464329 | 8_3:+24529606 | Msa1283150:three_prime_UTR |
| GCCTGACAACATTGCTATGA+AGG | 0.464502 | 8_3:-24527910 | None:intergenic |
| AAGGAATAAACCTGTTGTAA+TGG | 0.468522 | 8_3:-24528111 | None:intergenic |
| AGAATCATGACTCCAATAAG+AGG | 0.471208 | 8_3:-24529779 | None:intergenic |
| AGCTACTATGCTGGCTATGT+AGG | 0.471772 | 8_3:+24525622 | Msa1283150:CDS |
| TTGATGTTCAAACCATTCCT+TGG | 0.480441 | 8_3:+24529531 | Msa1283150:CDS |
| CGAGAAGAACACCAAGCTCT+AGG | 0.480505 | 8_3:+24526267 | Msa1283150:CDS |
| ATGAAGCAGGGCAAGAAGTA+AGG | 0.481618 | 8_3:-24527108 | None:intergenic |
| GACATCTGTATTATGGGGAA+TGG | 0.486093 | 8_3:+24525758 | Msa1283150:CDS |
| ATTGGGAGGCTATTTGGCTC+AGG | 0.486506 | 8_3:+24526562 | Msa1283150:CDS |
| GTTGAAAGGAAAGAGGATGC+TGG | 0.487129 | 8_3:+24529743 | Msa1283150:three_prime_UTR |
| AGCTTCAGCATCATCTATGA+TGG | 0.493611 | 8_3:-24527291 | None:intergenic |
| GTATAGTATCATAAATAAAA+GGG | 0.496258 | 8_3:+24524171 | Msa1283150:five_prime_UTR |
| CTGTTAGTCCTCTAAATTTG+GGG | 0.496551 | 8_3:+24527548 | Msa1283150:CDS |
| TAAGTCCCTACAATTGTGCT+TGG | 0.496968 | 8_3:-24530007 | None:intergenic |
| TGTATTGGTATATTGTAAGT+TGG | 0.500955 | 8_3:-24527723 | None:intergenic |
| AAATATGAGAGAGCCATTGT+TGG | 0.503789 | 8_3:+24524259 | Msa1283150:CDS |
| ACTTAGGTGACCATTACAAC+AGG | 0.504930 | 8_3:+24528101 | Msa1283150:intron |
| TGGTGCAATTGGACCAGTAA+AGG | 0.511905 | 8_3:+24526041 | Msa1283150:CDS |
| TATTGCTTCTTCTCCAACAA+TGG | 0.512437 | 8_3:-24524272 | None:intergenic |
| AGGGATAGTTGAAAGGAAAG+AGG | 0.513005 | 8_3:+24529736 | Msa1283150:three_prime_UTR |
| TAGTAGTTATTGCCTGCTTG+TGG | 0.513431 | 8_3:+24527151 | Msa1283150:CDS |
| ATGGATGCTTCTTTCCTCCC+AGG | 0.513858 | 8_3:+24528800 | Msa1283150:CDS |
| TGGATTCCGGTAAGTATCAT+CGG | 0.513906 | 8_3:+24527171 | Msa1283150:CDS |
| TCAGAAAGAGATATATCAAA+GGG | 0.514956 | 8_3:-24524207 | None:intergenic |
| GCAATGATAGATGACATAAA+GGG | 0.520373 | 8_3:-24527386 | None:intergenic |
| TAATTGTTTAAACTATATGC+AGG | 0.528263 | 8_3:+24527235 | Msa1283150:CDS |
| TCAAATTTATATTAATAGAA+GGG | 0.537660 | 8_3:-24529979 | None:intergenic |
| CTGTTGAGAGTCCTAGAGCT+TGG | 0.540220 | 8_3:-24526278 | None:intergenic |
| GCTATAGAGGGATAGTTGAA+AGG | 0.540327 | 8_3:+24529729 | Msa1283150:three_prime_UTR |
| CCTGACAACATTGCTATGAA+GGG | 0.540798 | 8_3:-24527909 | None:intergenic |
| ACTTACAATATACCAATACA+TGG | 0.542705 | 8_3:+24527726 | Msa1283150:CDS |
| AAGGGGTAACTTTGCAACAA+TGG | 0.549893 | 8_3:-24527891 | None:intergenic |
| AAAGCTATTGGACCTGCCGC+AGG | 0.553060 | 8_3:+24528350 | Msa1283150:CDS |
| GTAGGATCATCATTCATGCT+TGG | 0.553411 | 8_3:+24525726 | Msa1283150:intron |
| GTTAGTCCTCTAAATTTGGG+GGG | 0.555025 | 8_3:+24527550 | Msa1283150:CDS |
| TGTTAGTCCTCTAAATTTGG+GGG | 0.556819 | 8_3:+24527549 | Msa1283150:CDS |
| CAAGAGAAATGAATCTCAAG+TGG | 0.563545 | 8_3:+24529887 | Msa1283150:three_prime_UTR |
| CACATTGTACCACCTGCGGC+AGG | 0.564825 | 8_3:-24528362 | None:intergenic |
| CAATACTACAAGGATTGTCC+TGG | 0.565609 | 8_3:+24524290 | Msa1283150:CDS |
| TTGGTCAATACAGATTAACT+TGG | 0.565896 | 8_3:+24528765 | Msa1283150:intron |
| TAAAGGGCCAATTCATCAAG+AGG | 0.566648 | 8_3:-24527370 | None:intergenic |
| ATCAGAAAGAGATATATCAA+AGG | 0.566912 | 8_3:-24524208 | None:intergenic |
| AGCAAATGAAAAGCTATAGA+GGG | 0.567993 | 8_3:+24529717 | Msa1283150:three_prime_UTR |
| ACACACAATATTCATGAGGA+TGG | 0.568497 | 8_3:-24527964 | None:intergenic |
| ATAGTAGCTAATATCAGCCT+CGG | 0.569820 | 8_3:-24525608 | None:intergenic |
| TTAACATTGCTCGAATCACA+GGG | 0.570393 | 8_3:+24527767 | Msa1283150:CDS |
| AACTTGGTCACAAAAGCGTA+TGG | 0.570630 | 8_3:+24528781 | Msa1283150:CDS |
| CTCACCATGAAATAAAGGAA+TGG | 0.574296 | 8_3:-24525263 | None:intergenic |
| TCATGATATTGCTTATCAAG+AGG | 0.581145 | 8_3:+24527427 | Msa1283150:CDS |
| TTATAAAGGTTATGACCAGA+AGG | 0.590534 | 8_3:-24529841 | None:intergenic |
| ATTAATCTGTCACATAAACA+TGG | 0.594445 | 8_3:+24524229 | Msa1283150:exon |
| ATCATTGGACCAGCATTGGG+AGG | 0.595293 | 8_3:+24526548 | Msa1283150:CDS |
| AGGGACTTATCCTCTAATCT+GGG | 0.595810 | 8_3:+24530021 | Msa1283150:three_prime_UTR |
| TGAATACACTCACCACTGCT+CGG | 0.596647 | 8_3:-24528142 | None:intergenic |
| ACTCCTGATATTATGAAGCA+GGG | 0.598947 | 8_3:-24527120 | None:intergenic |
| TTGGAGTCATGATTCTCAAG+TGG | 0.599560 | 8_3:+24529786 | Msa1283150:three_prime_UTR |
| GCTTGGTCAACCTTACAACC+AGG | 0.599602 | 8_3:-24524308 | None:intergenic |
| GCTGATATTAGCTACTATGC+TGG | 0.603154 | 8_3:+24525613 | Msa1283150:CDS |
| AGTCCCTACAATTGTGCTTG+GGG | 0.605996 | 8_3:-24530005 | None:intergenic |
| TGTCCCCAAGCACAATTGTA+GGG | 0.606014 | 8_3:+24530002 | Msa1283150:three_prime_UTR |
| GGAATGGTTTCTGATCGCTA+TGG | 0.618861 | 8_3:+24525774 | Msa1283150:CDS |
| TAGAAGGGTAATAATGCAAG+TGG | 0.619140 | 8_3:-24529964 | None:intergenic |
| CTATGTAAGTTATAATGTGT+AGG | 0.621340 | 8_3:+24529930 | Msa1283150:three_prime_UTR |
| ACTTATCCTCTAATCTGGGT+AGG | 0.621846 | 8_3:+24530025 | Msa1283150:three_prime_UTR |
| GCTATTGGACCTGCCGCAGG+TGG | 0.624900 | 8_3:+24528353 | Msa1283150:CDS |
| AACTCACATTGTACCACCTG+CGG | 0.630586 | 8_3:-24528366 | None:intergenic |
| AAACAGGAACAACACCAAAG+AGG | 0.630869 | 8_3:+24528287 | Msa1283150:intron |
| ACTTTGACATCTGTATTATG+GGG | 0.630925 | 8_3:+24525753 | Msa1283150:CDS |
| AAGAGAAATGAATCTCAAGT+GGG | 0.631914 | 8_3:+24529888 | Msa1283150:three_prime_UTR |
| AACTTCACAACTGATGATGT+CGG | 0.634201 | 8_3:+24527577 | Msa1283150:CDS |
| GGAGAAGAAGCAATACTACA+AGG | 0.641228 | 8_3:+24524280 | Msa1283150:CDS |
| ACTTACCGGAATCCACAAGC+AGG | 0.653114 | 8_3:-24527163 | None:intergenic |
| CTGACAACATTGCTATGAAG+GGG | 0.657130 | 8_3:-24527908 | None:intergenic |
| TTAATCTGTCACATAAACAT+GGG | 0.657892 | 8_3:+24524230 | Msa1283150:exon |
| TTACACACACAATATTCATG+AGG | 0.676661 | 8_3:-24527968 | None:intergenic |
| AGGAGTTATGTAGTATCACA+GGG | 0.681228 | 8_3:+24529607 | Msa1283150:three_prime_UTR |
| GAATTCAAAATGAACAACAC+AGG | 0.688626 | 8_3:-24524083 | None:intergenic |
| GAAACACTTCACAAGCACAA+TGG | 0.697668 | 8_3:+24527257 | Msa1283150:CDS |
| CAAGCAAAAGAGCTTAACCA+AGG | 0.710227 | 8_3:+24524326 | Msa1283150:CDS |
| AGTTGAGGATCATACCTGGG+AGG | 0.734301 | 8_3:-24528814 | None:intergenic |
| TAACATTGCTCGAATCACAG+GGG | 0.777198 | 8_3:+24527768 | Msa1283150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATGAAAATGAAAT+TGG | - | chr8_3:24525298-24525317 | None:intergenic | 10.0% |
| !!! | AATATTAAGAATACAATTTT+TGG | + | chr8_3:24525500-24525519 | Msa1283150:intron | 10.0% |
| !!! | CTTATTATATATATGTTTTT+TGG | + | chr8_3:24527482-24527501 | Msa1283150:intron | 10.0% |
| !!! | ATTTTTTATTTTGAAGAAAA+TGG | - | chr8_3:24528179-24528198 | None:intergenic | 10.0% |
| !!! | ATTTTGAAACAATTATTTTT+TGG | - | chr8_3:24529050-24529069 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr8_3:24529155-24529174 | None:intergenic | 10.0% |
| !! | TCAAATTTATATTAATAGAA+GGG | - | chr8_3:24529982-24530001 | None:intergenic | 10.0% |
| !! | ATCAAATTTATATTAATAGA+AGG | - | chr8_3:24529983-24530002 | None:intergenic | 10.0% |
| !! | GTATAGTATCATAAATAAAA+GGG | + | chr8_3:24524171-24524190 | Msa1283150:five_prime_UTR | 15.0% |
| !! | TTATTCATATACATACAAAA+AGG | - | chr8_3:24525396-24525415 | None:intergenic | 15.0% |
| !! | TTTGTATGTATATGAATAAT+TGG | + | chr8_3:24525397-24525416 | Msa1283150:intron | 15.0% |
| !! | ATAATTGAAATTGTGATATA+TGG | + | chr8_3:24526484-24526503 | Msa1283150:intron | 15.0% |
| !!! | GTTTTATAAAATTGAAAAGT+AGG | - | chr8_3:24526848-24526867 | None:intergenic | 15.0% |
| !!! | TTTCAATTTTATAAAACTCA+AGG | + | chr8_3:24526851-24526870 | Msa1283150:intron | 15.0% |
| !!! | TTCAATTTTATAAAACTCAA+GGG | + | chr8_3:24526852-24526871 | Msa1283150:intron | 15.0% |
| !!! | GGTAAATTTTTTAATCAATA+AGG | + | chr8_3:24527448-24527467 | Msa1283150:intron | 15.0% |
| !!! | AGAGTTTAAGATATATTAAA+TGG | + | chr8_3:24528036-24528055 | Msa1283150:intron | 15.0% |
| !!! | TTTTTTTTTTGATATATCTC+AGG | - | chr8_3:24528913-24528932 | None:intergenic | 15.0% |
| !! | AAGTTGAAACAAATTTATAA+AGG | - | chr8_3:24529858-24529877 | None:intergenic | 15.0% |
| !! | GGTATAGTATCATAAATAAA+AGG | + | chr8_3:24524170-24524189 | Msa1283150:five_prime_UTR | 20.0% |
| !!! | TATGACGAAAAGATTTTTAA+TGG | - | chr8_3:24524357-24524376 | None:intergenic | 20.0% |
| !!! | TTAAAAATCTTTTCGTCATA+TGG | + | chr8_3:24524357-24524376 | Msa1283150:CDS | 20.0% |
| !! | TGTAAAAAGAGAAAAAAATG+TGG | + | chr8_3:24524748-24524767 | Msa1283150:intron | 20.0% |
| !! | GTAAAAAGAGAAAAAAATGT+GGG | + | chr8_3:24524749-24524768 | Msa1283150:intron | 20.0% |
| !! | AAAACTGAAAAATGAGAATT+AGG | + | chr8_3:24524910-24524929 | Msa1283150:intron | 20.0% |
| !!! | TAAGAATACAATTTTTGGTT+AGG | + | chr8_3:24525505-24525524 | Msa1283150:intron | 20.0% |
| !!! | AACATTTATTTTTCAGGTAA+GGG | + | chr8_3:24525567-24525586 | Msa1283150:intron | 20.0% |
| !! | CACAATTTCAATTATTATGA+TGG | - | chr8_3:24526479-24526498 | None:intergenic | 20.0% |
| !!! | AATTGTGATATATGGTTTTA+TGG | + | chr8_3:24526492-24526511 | Msa1283150:intron | 20.0% |
| !!! | ATATATGGTTTTATGGTTTT+AGG | + | chr8_3:24526499-24526518 | Msa1283150:intron | 20.0% |
| !! | CATTATTCTTTCTAATACTT+TGG | + | chr8_3:24526741-24526760 | Msa1283150:intron | 20.0% |
| !!! | ATATCACCTATTTTTCATTT+TGG | + | chr8_3:24526940-24526959 | Msa1283150:intron | 20.0% |
| !!! | AAATCATTTGTTGTGAAAAA+TGG | - | chr8_3:24527079-24527098 | None:intergenic | 20.0% |
| !! | TAATTGTTTAAACTATATGC+AGG | + | chr8_3:24527235-24527254 | Msa1283150:CDS | 20.0% |
| !!! | ACTGATTATATCCTTTTTTA+TGG | + | chr8_3:24528078-24528097 | Msa1283150:intron | 20.0% |
| !!! | TTTTGTTTTCTTACAAAGTT+TGG | + | chr8_3:24528226-24528245 | Msa1283150:intron | 20.0% |
| !!! | TTGAATGTACATTTCTAAAA+AGG | + | chr8_3:24528419-24528438 | Msa1283150:intron | 20.0% |
| !! | TATCATAAGAAGAAAGATAA+AGG | - | chr8_3:24528745-24528764 | None:intergenic | 20.0% |
| !! | TATCTTTCTTCTTATGATAT+TGG | + | chr8_3:24528746-24528765 | Msa1283150:intron | 20.0% |
| !! | ATAAACAAACAAATTAGTTG+AGG | - | chr8_3:24528832-24528851 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr8_3:24529091-24529110 | None:intergenic | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | - | chr8_3:24529125-24529144 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | - | chr8_3:24529126-24529145 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr8_3:24529189-24529208 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr8_3:24529188-24529207 | Msa1283150:intron | 20.0% |
| !!! | TTACAGTTAATTTAGGTTTA+TGG | - | chr8_3:24529368-24529387 | None:intergenic | 20.0% |
| !! | AGCTTATTTACAGTTAATTT+AGG | - | chr8_3:24529375-24529394 | None:intergenic | 20.0% |
| ! | TCAGAAAGAGATATATCAAA+GGG | - | chr8_3:24524210-24524229 | None:intergenic | 25.0% |
| ! | ATCAGAAAGAGATATATCAA+AGG | - | chr8_3:24524211-24524230 | None:intergenic | 25.0% |
| ! | ATTAATCTGTCACATAAACA+TGG | + | chr8_3:24524229-24524248 | Msa1283150:exon | 25.0% |
| ! | TTAATCTGTCACATAAACAT+GGG | + | chr8_3:24524230-24524249 | Msa1283150:exon | 25.0% |
| !! | CTTTCCAATTTTTGTTCATT+AGG | + | chr8_3:24524456-24524475 | Msa1283150:intron | 25.0% |
| ! | AAGTCCTAATGAACAAAAAT+TGG | - | chr8_3:24524463-24524482 | None:intergenic | 25.0% |
| !! | CATTTGAGTTTCCTTTATTT+AGG | + | chr8_3:24524717-24524736 | Msa1283150:intron | 25.0% |
| !! | ACAAACTTTTGCCTAAATAA+AGG | - | chr8_3:24524731-24524750 | None:intergenic | 25.0% |
| ! | TGTAATCAATAAGAGAGAAT+AGG | + | chr8_3:24524878-24524897 | Msa1283150:intron | 25.0% |
| ! | AATAATTAGCTATCCAATGT+GGG | - | chr8_3:24524957-24524976 | None:intergenic | 25.0% |
| ! | AAATAATTAGCTATCCAATG+TGG | - | chr8_3:24524958-24524977 | None:intergenic | 25.0% |
| !!! | TTTTCCATTCCTTTATTTCA+TGG | + | chr8_3:24525259-24525278 | Msa1283150:CDS | 25.0% |
| ! | ATAAACTCACCATGAAATAA+AGG | - | chr8_3:24525271-24525290 | None:intergenic | 25.0% |
| ! | ACATAATACAATCTTCAATG+AGG | + | chr8_3:24525543-24525562 | Msa1283150:intron | 25.0% |
| !!! | CAACATTTATTTTTCAGGTA+AGG | + | chr8_3:24525566-24525585 | Msa1283150:intron | 25.0% |
| !!! | TTTTAAAATTGCAAAATCCG+AGG | + | chr8_3:24525591-24525610 | Msa1283150:CDS | 25.0% |
| ! | AACTTTGACATCTGTATTAT+GGG | + | chr8_3:24525752-24525771 | Msa1283150:CDS | 25.0% |
| !! | TGTTATCACAAGATTTCTTT+TGG | + | chr8_3:24526008-24526027 | Msa1283150:CDS | 25.0% |
| !! | GTTATCACAAGATTTCTTTT+GGG | + | chr8_3:24526009-24526028 | Msa1283150:CDS | 25.0% |
| !!! | TTTCTTTTGGGAACTTTAAA+TGG | + | chr8_3:24526021-24526040 | Msa1283150:CDS | 25.0% |
| ! | AAAAGAAATTGTACCTTTAC+TGG | - | chr8_3:24526057-24526076 | None:intergenic | 25.0% |
| !!! | AGTAAAGGTACAATTTCTTT+TGG | + | chr8_3:24526056-24526075 | Msa1283150:intron | 25.0% |
| ! | GTATTGCTAAGAACTAAAAT+AGG | - | chr8_3:24526450-24526469 | None:intergenic | 25.0% |
| ! | ATATCCAAATATCTTTCCAA+AGG | + | chr8_3:24526792-24526811 | Msa1283150:intron | 25.0% |
| ! | TATCCAAATATCTTTCCAAA+GGG | + | chr8_3:24526793-24526812 | Msa1283150:intron | 25.0% |
| ! | GAGTAACCAAAATGAAAAAT+AGG | - | chr8_3:24526949-24526968 | None:intergenic | 25.0% |
| !! | TATAGAAAATGGAAGCATAA+AGG | + | chr8_3:24527313-24527332 | Msa1283150:CDS | 25.0% |
| !!! | TACTAACTTGTGAAATTTTC+AGG | + | chr8_3:24527682-24527701 | Msa1283150:intron | 25.0% |
| !! | TGTATTGGTATATTGTAAGT+TGG | - | chr8_3:24527726-24527745 | None:intergenic | 25.0% |
| ! | ACTTACAATATACCAATACA+TGG | + | chr8_3:24527726-24527745 | Msa1283150:CDS | 25.0% |
| ! | CTCTCAATATTAGTCATAAA+TGG | - | chr8_3:24528020-24528039 | None:intergenic | 25.0% |
| ! | AGGATATAATCAGTCAAATT+TGG | - | chr8_3:24528072-24528091 | None:intergenic | 25.0% |
| !!! | ATATCCTTTTTTATGGACTT+AGG | + | chr8_3:24528085-24528104 | Msa1283150:intron | 25.0% |
| !! | AGTTTGGTATTAGATTTTGA+TGG | + | chr8_3:24528242-24528261 | Msa1283150:intron | 25.0% |
| !!! | GGAATTTTGACATATTGATT+TGG | + | chr8_3:24528263-24528282 | Msa1283150:intron | 25.0% |
| ! | TACCAATCTTCTTTATGATA+TGG | + | chr8_3:24528515-24528534 | Msa1283150:intron | 25.0% |
| ! | AAAAAACAATCAAGTTTCAG+AGG | - | chr8_3:24528542-24528561 | None:intergenic | 25.0% |
| ! | AAAAACTTGTCAATTGCAAA+TGG | - | chr8_3:24528624-24528643 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr8_3:24529179-24529198 | Msa1283150:intron | 25.0% |
| !! | GAGTAATAAGTTGTTATTGT+CGG | + | chr8_3:24529297-24529316 | Msa1283150:intron | 25.0% |
| !! | GTTAATTTAGGTTTATGGTA+CGG | - | chr8_3:24529363-24529382 | None:intergenic | 25.0% |
| ! | CTATGTAAGTTATAATGTGT+AGG | + | chr8_3:24529930-24529949 | Msa1283150:three_prime_UTR | 25.0% |
| GAATTCAAAATGAACAACAC+AGG | - | chr8_3:24524086-24524105 | None:intergenic | 30.0% | |
| TATACCAACTGAAAAAGAAG+TGG | - | chr8_3:24524156-24524175 | None:intergenic | 30.0% | |
| !! | GATTTTTAATGGATACACCT+TGG | - | chr8_3:24524346-24524365 | None:intergenic | 30.0% |
| ! | AAATCTTTTCGTCATATGGA+TGG | + | chr8_3:24524361-24524380 | Msa1283150:CDS | 30.0% |
| ACAACAAAAGATTCAATCTG+TGG | - | chr8_3:24524827-24524846 | None:intergenic | 30.0% | |
| CAAAAAGGATACTCAAAAAC+TGG | - | chr8_3:24525381-24525400 | None:intergenic | 30.0% | |
| AATAATTGGTCCTATAGTGT+TGG | + | chr8_3:24525411-24525430 | Msa1283150:intron | 30.0% | |
| !! | TGAGGCAACATTTATTTTTC+AGG | + | chr8_3:24525561-24525580 | Msa1283150:intron | 30.0% |
| TGATAAAAGACTTCAAAGAG+TGG | - | chr8_3:24525668-24525687 | None:intergenic | 30.0% | |
| CATTGTTATAAGTTGTTCAC+TGG | + | chr8_3:24525686-24525705 | Msa1283150:intron | 30.0% | |
| GTGATGATTGAAAATGTTGT+AGG | + | chr8_3:24525708-24525727 | Msa1283150:intron | 30.0% | |
| GAACTTTGACATCTGTATTA+TGG | + | chr8_3:24525751-24525770 | Msa1283150:CDS | 30.0% | |
| ACTTTGACATCTGTATTATG+GGG | + | chr8_3:24525753-24525772 | Msa1283150:CDS | 30.0% | |
| AAAACACCAATGACTATAAC+AGG | - | chr8_3:24525807-24525826 | None:intergenic | 30.0% | |
| ! | AAGGTACAATTTCTTTTGGA+TGG | + | chr8_3:24526060-24526079 | Msa1283150:intron | 30.0% |
| ! | AATTTTTCGTCTATTGCACT+AGG | + | chr8_3:24526121-24526140 | Msa1283150:intron | 30.0% |
| AGAGTAATCCTCTATTTAAC+AGG | + | chr8_3:24526224-24526243 | Msa1283150:intron | 30.0% | |
| !! | TTTTCAACTTCGGTTTGAAT+GGG | - | chr8_3:24526421-24526440 | None:intergenic | 30.0% |
| CTAAGAACTAAAATAGGACA+TGG | - | chr8_3:24526444-24526463 | None:intergenic | 30.0% | |
| TCATCTGAATACAAAGTTTC+AGG | - | chr8_3:24526607-24526626 | None:intergenic | 30.0% | |
| TATTCAGATGAGAAGTTTGA+AGG | + | chr8_3:24526616-24526635 | Msa1283150:intron | 30.0% | |
| ATATTTGGATATTTCTCTGC+TGG | - | chr8_3:24526784-24526803 | None:intergenic | 30.0% | |
| ! | ATAAAACTCAAGGGTTTGTT+TGG | + | chr8_3:24526861-24526880 | Msa1283150:intron | 30.0% |
| GAAAAATGGAAATCCACATA+TGG | - | chr8_3:24527065-24527084 | None:intergenic | 30.0% | |
| ! | TTCACAACAAATGATTTTGC+AGG | + | chr8_3:24527082-24527101 | Msa1283150:intron | 30.0% |
| ! | CGGTTTGATCATATGTTTTA+CGG | + | chr8_3:24527191-24527210 | Msa1283150:CDS | 30.0% |
| ATGAAAACCTCTTGATGAAT+TGG | + | chr8_3:24527363-24527382 | Msa1283150:CDS | 30.0% | |
| GCAATGATAGATGACATAAA+GGG | - | chr8_3:24527389-24527408 | None:intergenic | 30.0% | |
| AGCAATGATAGATGACATAA+AGG | - | chr8_3:24527390-24527409 | None:intergenic | 30.0% | |
| TCATGATATTGCTTATCAAG+AGG | + | chr8_3:24527427-24527446 | Msa1283150:CDS | 30.0% | |
| ACAAAGAGAAAACCTAAAGA+AGG | - | chr8_3:24527525-24527544 | None:intergenic | 30.0% | |
| !! | TTCTTTAGGTTTTCTCTTTG+TGG | + | chr8_3:24527524-24527543 | Msa1283150:intron | 30.0% |
| TCTGTTAGTCCTCTAAATTT+GGG | + | chr8_3:24527547-24527566 | Msa1283150:CDS | 30.0% | |
| GTATAGAAAAAATCTGCACA+TGG | - | chr8_3:24527872-24527891 | None:intergenic | 30.0% | |
| TTACACACACAATATTCATG+AGG | - | chr8_3:24527971-24527990 | None:intergenic | 30.0% | |
| AAGGAATAAACCTGTTGTAA+TGG | - | chr8_3:24528114-24528133 | None:intergenic | 30.0% | |
| !! | GACATATTGATTTGGAAAAC+AGG | + | chr8_3:24528271-24528290 | Msa1283150:intron | 30.0% |
| ATGTCTCTATTCAAAGCTAT+TGG | + | chr8_3:24528338-24528357 | Msa1283150:CDS | 30.0% | |
| AAACTTGCACATTAATGTAC+AGG | + | chr8_3:24528469-24528488 | Msa1283150:intron | 30.0% | |
| GACCATATCATAAAGAAGAT+TGG | - | chr8_3:24528520-24528539 | None:intergenic | 30.0% | |
| CAATTGCAAATGGATCAAAA+AGG | - | chr8_3:24528614-24528633 | None:intergenic | 30.0% | |
| TTGGTCAATACAGATTAACT+TGG | + | chr8_3:24528765-24528784 | Msa1283150:intron | 30.0% | |
| ! | TAAGCACTTACAAACCATTT+TGG | + | chr8_3:24528965-24528984 | Msa1283150:intron | 30.0% |
| ! | AAGCACTTACAAACCATTTT+GGG | + | chr8_3:24528966-24528985 | Msa1283150:intron | 30.0% |
| !! | TACAAACCATTTTGGGAATA+TGG | + | chr8_3:24528973-24528992 | Msa1283150:intron | 30.0% |
| GTTTAACCATATTCCCAAAA+TGG | - | chr8_3:24528982-24529001 | None:intergenic | 30.0% | |
| !!! | GATACTCATTTTGAAACAGA+GGG | - | chr8_3:24529020-24529039 | None:intergenic | 30.0% |
| ATTGCACATAGATTAAGGAA+TGG | - | chr8_3:24529245-24529264 | None:intergenic | 30.0% | |
| TTCCTTAATCTATGTGCAAT+TGG | + | chr8_3:24529245-24529264 | Msa1283150:intron | 30.0% | |
| TTCTAAACGCGTATAATAAG+AGG | + | chr8_3:24529396-24529415 | Msa1283150:intron | 30.0% | |
| ! | GTTTTGCTAGATGTATTACT+TGG | + | chr8_3:24529427-24529446 | Msa1283150:intron | 30.0% |
| ! | GGTCTTTTTCTTCCTTAATT+TGG | + | chr8_3:24529488-24529507 | Msa1283150:CDS | 30.0% |
| ! | TTCTTCCTTAATTTGGTTGA+AGG | + | chr8_3:24529495-24529514 | Msa1283150:CDS | 30.0% |
| AAGCAAATGAAAAGCTATAG+AGG | + | chr8_3:24529716-24529735 | Msa1283150:three_prime_UTR | 30.0% | |
| AGCAAATGAAAAGCTATAGA+GGG | + | chr8_3:24529717-24529736 | Msa1283150:three_prime_UTR | 30.0% | |
| TTATAAAGGTTATGACCAGA+AGG | - | chr8_3:24529844-24529863 | None:intergenic | 30.0% | |
| AAGAGAAATGAATCTCAAGT+GGG | + | chr8_3:24529888-24529907 | Msa1283150:three_prime_UTR | 30.0% | |
| AGAGTTCATTGAGAAACTCT+TGG | - | chr8_3:24524117-24524136 | None:intergenic | 35.0% | |
| !!! | ACAACCACTTCTTTTTCAGT+TGG | + | chr8_3:24524149-24524168 | Msa1283150:five_prime_UTR | 35.0% |
| AAATATGAGAGAGCCATTGT+TGG | + | chr8_3:24524259-24524278 | Msa1283150:CDS | 35.0% | |
| TATTGCTTCTTCTCCAACAA+TGG | - | chr8_3:24524275-24524294 | None:intergenic | 35.0% | |
| AGAGATTAATACTCCGAGAT+TGG | - | chr8_3:24524584-24524603 | None:intergenic | 35.0% | |
| AGATCTTGAAAAAGTTCGTG+CGG | + | chr8_3:24524668-24524687 | Msa1283150:intron | 35.0% | |
| AAAAAATGTGGGTGTGTATG+TGG | + | chr8_3:24524760-24524779 | Msa1283150:intron | 35.0% | |
| AATCCCTGCATTTCTTACTA+GGG | - | chr8_3:24525123-24525142 | None:intergenic | 35.0% | |
| AAATCCCTGCATTTCTTACT+AGG | - | chr8_3:24525124-24525143 | None:intergenic | 35.0% | |
| ! | AATGGAAAAAGTGATGATGC+AGG | - | chr8_3:24525248-24525267 | None:intergenic | 35.0% |
| CTCACCATGAAATAAAGGAA+TGG | - | chr8_3:24525266-24525285 | None:intergenic | 35.0% | |
| ATAGTAGCTAATATCAGCCT+CGG | - | chr8_3:24525611-24525630 | None:intergenic | 35.0% | |
| CGAAAACCTGTTATAGTCAT+TGG | + | chr8_3:24525798-24525817 | Msa1283150:CDS | 35.0% | |
| GGAACTTTAAATGGTGCAAT+TGG | + | chr8_3:24526030-24526049 | Msa1283150:CDS | 35.0% | |
| !!! | GATTTTTTAATGTGTGCAGC+TGG | + | chr8_3:24526143-24526162 | Msa1283150:intron | 35.0% |
| AGCATAAGCCTGTTAAATAG+AGG | - | chr8_3:24526235-24526254 | None:intergenic | 35.0% | |
| !! | GTTTTCAACTTCGGTTTGAA+TGG | - | chr8_3:24526422-24526441 | None:intergenic | 35.0% |
| ! | TAGGACATGGTTTTCAACTT+CGG | - | chr8_3:24526431-24526450 | None:intergenic | 35.0% |
| TTTAATCATTGGACCAGCAT+TGG | + | chr8_3:24526544-24526563 | Msa1283150:CDS | 35.0% | |
| TTAATCATTGGACCAGCATT+GGG | + | chr8_3:24526545-24526564 | Msa1283150:CDS | 35.0% | |
| TGAGAAGTTTGAAGGATGAA+TGG | + | chr8_3:24526624-24526643 | Msa1283150:intron | 35.0% | |
| ! | GAACCCTTTGGAAAGATATT+TGG | - | chr8_3:24526799-24526818 | None:intergenic | 35.0% |
| !!! | TTCCTTTTGGGATAAGTAAG+TGG | + | chr8_3:24526816-24526835 | Msa1283150:intron | 35.0% |
| TTCCACTTACTTATCCCAAA+AGG | - | chr8_3:24526821-24526840 | None:intergenic | 35.0% | |
| TTGAATCCTTAGTGTCTGTT+TGG | - | chr8_3:24527034-24527053 | None:intergenic | 35.0% | |
| AGACACTAAGGATTCAACTA+TGG | + | chr8_3:24527037-24527056 | Msa1283150:intron | 35.0% | |
| TTCAACTATGGTTCCATATG+TGG | + | chr8_3:24527049-24527068 | Msa1283150:intron | 35.0% | |
| ACTCCTGATATTATGAAGCA+GGG | - | chr8_3:24527123-24527142 | None:intergenic | 35.0% | |
| AACTCCTGATATTATGAAGC+AGG | - | chr8_3:24527124-24527143 | None:intergenic | 35.0% | |
| ATCAAACCGATGATACTTAC+CGG | - | chr8_3:24527180-24527199 | None:intergenic | 35.0% | |
| GATGCTGAAGCTATAGAAAA+TGG | + | chr8_3:24527302-24527321 | Msa1283150:CDS | 35.0% | |
| CATGCTTGTTTACCTTCTTT+AGG | + | chr8_3:24527510-24527529 | Msa1283150:intron | 35.0% | |
| GTCTGTTAGTCCTCTAAATT+TGG | + | chr8_3:24527546-24527565 | Msa1283150:CDS | 35.0% | |
| CTGTTAGTCCTCTAAATTTG+GGG | + | chr8_3:24527548-24527567 | Msa1283150:CDS | 35.0% | |
| TGTTAGTCCTCTAAATTTGG+GGG | + | chr8_3:24527549-24527568 | Msa1283150:CDS | 35.0% | |
| ! | AACTTCACAACTGATGATGT+CGG | + | chr8_3:24527577-24527596 | Msa1283150:CDS | 35.0% |
| GGTAATGTTCTTGCAATTAC+AGG | + | chr8_3:24527598-24527617 | Msa1283150:CDS | 35.0% | |
| TGCAATTACAGGTGCATATT+CGG | + | chr8_3:24527609-24527628 | Msa1283150:intron | 35.0% | |
| !! | CACAAGCTTTTTCCATGTAT+TGG | - | chr8_3:24527741-24527760 | None:intergenic | 35.0% |
| CAATACATGGAAAAAGCTTG+TGG | + | chr8_3:24527739-24527758 | Msa1283150:CDS | 35.0% | |
| TTAACATTGCTCGAATCACA+GGG | + | chr8_3:24527767-24527786 | Msa1283150:CDS | 35.0% | |
| ACACACAATATTCATGAGGA+TGG | - | chr8_3:24527967-24527986 | None:intergenic | 35.0% | |
| GTCACCTAAGTCCATAAAAA+AGG | - | chr8_3:24528092-24528111 | None:intergenic | 35.0% | |
| ATTAGTTGAGGATCATACCT+GGG | - | chr8_3:24528820-24528839 | None:intergenic | 35.0% | |
| AATTAGTTGAGGATCATACC+TGG | - | chr8_3:24528821-24528840 | None:intergenic | 35.0% | |
| !!! | CGATACTCATTTTGAAACAG+AGG | - | chr8_3:24529021-24529040 | None:intergenic | 35.0% |
| AGCCAATTGCACATAGATTA+AGG | - | chr8_3:24529250-24529269 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr8_3:24529271-24529290 | Msa1283150:intron | 35.0% |
| TAACACTCAAACAACCACTT+AGG | + | chr8_3:24529337-24529356 | Msa1283150:intron | 35.0% | |
| CAAGTCCTTCAACCAAATTA+AGG | - | chr8_3:24529503-24529522 | None:intergenic | 35.0% | |
| ! | CTTAATTTGGTTGAAGGACT+TGG | + | chr8_3:24529501-24529520 | Msa1283150:CDS | 35.0% |
| TTGATGTTCAAACCATTCCT+TGG | + | chr8_3:24529531-24529550 | Msa1283150:CDS | 35.0% | |
| ! | TTCTTCTTTTCACCAAGGAA+TGG | - | chr8_3:24529546-24529565 | None:intergenic | 35.0% |
| ! | GTGTTTTCTTCTTTTCACCA+AGG | - | chr8_3:24529551-24529570 | None:intergenic | 35.0% |
| AGGAGTTATGTAGTATCACA+GGG | + | chr8_3:24529607-24529626 | Msa1283150:three_prime_UTR | 35.0% | |
| GTATCACAGGGTCATTATTT+AGG | + | chr8_3:24529619-24529638 | Msa1283150:three_prime_UTR | 35.0% | |
| AGAATCATGACTCCAATAAG+AGG | - | chr8_3:24529782-24529801 | None:intergenic | 35.0% | |
| AAATAACTGCATTGTCCTTC+TGG | + | chr8_3:24529826-24529845 | Msa1283150:three_prime_UTR | 35.0% | |
| CAAGAGAAATGAATCTCAAG+TGG | + | chr8_3:24529887-24529906 | Msa1283150:three_prime_UTR | 35.0% | |
| TAGAAGGGTAATAATGCAAG+TGG | - | chr8_3:24529967-24529986 | None:intergenic | 35.0% | |
| GGAGAAGAAGCAATACTACA+AGG | + | chr8_3:24524280-24524299 | Msa1283150:CDS | 40.0% | |
| CAATACTACAAGGATTGTCC+TGG | + | chr8_3:24524290-24524309 | Msa1283150:CDS | 40.0% | |
| ! | CTTGGTTAAGCTCTTTTGCT+TGG | - | chr8_3:24524328-24524347 | None:intergenic | 40.0% |
| CAAGCAAAAGAGCTTAACCA+AGG | + | chr8_3:24524326-24524345 | Msa1283150:CDS | 40.0% | |
| GCTAATTGCTAATCCCACAT+TGG | + | chr8_3:24524941-24524960 | Msa1283150:intron | 40.0% | |
| ATGCAACTATGCAAGTTAGG+TGG | - | chr8_3:24525038-24525057 | None:intergenic | 40.0% | |
| GCAATGCAACTATGCAAGTT+AGG | - | chr8_3:24525041-24525060 | None:intergenic | 40.0% | |
| AGTACCCTAGTAAGAAATGC+AGG | + | chr8_3:24525116-24525135 | Msa1283150:intron | 40.0% | |
| GTACCCTAGTAAGAAATGCA+GGG | + | chr8_3:24525117-24525136 | Msa1283150:intron | 40.0% | |
| GTACAACAGACCAACACTAT+AGG | - | chr8_3:24525424-24525443 | None:intergenic | 40.0% | |
| GCTGATATTAGCTACTATGC+TGG | + | chr8_3:24525613-24525632 | Msa1283150:CDS | 40.0% | |
| GTAGGATCATCATTCATGCT+TGG | + | chr8_3:24525726-24525745 | Msa1283150:intron | 40.0% | |
| GACATCTGTATTATGGGGAA+TGG | + | chr8_3:24525758-24525777 | Msa1283150:CDS | 40.0% | |
| ! | GTCGTTCTCAACACACTTTT+CGG | + | chr8_3:24525961-24525980 | Msa1283150:CDS | 40.0% |
| CCATCCAAAAACTCGTACTA+AGG | - | chr8_3:24525987-24526006 | None:intergenic | 40.0% | |
| !! | CCTTAGTACGAGTTTTTGGA+TGG | + | chr8_3:24525984-24526003 | Msa1283150:CDS | 40.0% |
| !! | GTTTTAGGTAAGTGCAGCTT+GGG | + | chr8_3:24526514-24526533 | Msa1283150:intron | 40.0% |
| !! | TTTTAGGTAAGTGCAGCTTG+GGG | + | chr8_3:24526515-24526534 | Msa1283150:intron | 40.0% |
| TGGGGAACAGGTTTAATCAT+TGG | + | chr8_3:24526533-24526552 | Msa1283150:CDS | 40.0% | |
| !! | GTTAGTTTGTGTGCTGATAG+TGG | + | chr8_3:24526695-24526714 | Msa1283150:intron | 40.0% |
| ! | TCTTTCCAAAGGGTTCCTTT+TGG | + | chr8_3:24526803-24526822 | Msa1283150:intron | 40.0% |
| ! | CTTTCCAAAGGGTTCCTTTT+GGG | + | chr8_3:24526804-24526823 | Msa1283150:intron | 40.0% |
| TTATCCCAAAAGGAACCCTT+TGG | - | chr8_3:24526811-24526830 | None:intergenic | 40.0% | |
| CTGATACCAAACAGACACTA+AGG | + | chr8_3:24527025-24527044 | Msa1283150:intron | 40.0% | |
| TTGCCCTGCTTCATAATATC+AGG | + | chr8_3:24527117-24527136 | Msa1283150:CDS | 40.0% | |
| TAGTAGTTATTGCCTGCTTG+TGG | + | chr8_3:24527151-24527170 | Msa1283150:CDS | 40.0% | |
| TGGATTCCGGTAAGTATCAT+CGG | + | chr8_3:24527171-24527190 | Msa1283150:CDS | 40.0% | |
| GAAACACTTCACAAGCACAA+TGG | + | chr8_3:24527257-24527276 | Msa1283150:CDS | 40.0% | |
| AGCTTCAGCATCATCTATGA+TGG | - | chr8_3:24527294-24527313 | None:intergenic | 40.0% | |
| TAAAGGGCCAATTCATCAAG+AGG | - | chr8_3:24527373-24527392 | None:intergenic | 40.0% | |
| GTTAGTCCTCTAAATTTGGG+GGG | + | chr8_3:24527550-24527569 | Msa1283150:CDS | 40.0% | |
| TTCAATCCCCCCAAATTTAG+AGG | - | chr8_3:24527559-24527578 | None:intergenic | 40.0% | |
| GTGATTCGAGCAATGTTAAC+AGG | - | chr8_3:24527766-24527785 | None:intergenic | 40.0% | |
| GTTAACATTGCTCGAATCAC+AGG | + | chr8_3:24527766-24527785 | Msa1283150:CDS | 40.0% | |
| TAACATTGCTCGAATCACAG+GGG | + | chr8_3:24527768-24527787 | Msa1283150:CDS | 40.0% | |
| AAGGGGTAACTTTGCAACAA+TGG | - | chr8_3:24527894-24527913 | None:intergenic | 40.0% | |
| CTGACAACATTGCTATGAAG+GGG | - | chr8_3:24527911-24527930 | None:intergenic | 40.0% | |
| CCTGACAACATTGCTATGAA+GGG | - | chr8_3:24527912-24527931 | None:intergenic | 40.0% | |
| ACTTAGGTGACCATTACAAC+AGG | + | chr8_3:24528101-24528120 | Msa1283150:intron | 40.0% | |
| AAACAGGAACAACACCAAAG+AGG | + | chr8_3:24528287-24528306 | Msa1283150:intron | 40.0% | |
| ! | AACTTGGTCACAAAAGCGTA+TGG | + | chr8_3:24528781-24528800 | Msa1283150:CDS | 40.0% |
| TAAACAATCACCACTGCACT+AGG | + | chr8_3:24528881-24528900 | Msa1283150:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8_3:24529275-24529294 | Msa1283150:intron | 40.0% |
| ACTGTTGTGCATTTAACTGC+AGG | + | chr8_3:24529456-24529475 | Msa1283150:intron | 40.0% | |
| TTTAACTGCAGGCACTCATA+TGG | + | chr8_3:24529467-24529486 | Msa1283150:intron | 40.0% | |
| CTGATATCAGACAACTTTGC+AGG | + | chr8_3:24529587-24529606 | Msa1283150:exon | 40.0% | |
| CAGGAGTTATGTAGTATCAC+AGG | + | chr8_3:24529606-24529625 | Msa1283150:three_prime_UTR | 40.0% | |
| GCTATAGAGGGATAGTTGAA+AGG | + | chr8_3:24529729-24529748 | Msa1283150:three_prime_UTR | 40.0% | |
| AGGGATAGTTGAAAGGAAAG+AGG | + | chr8_3:24529736-24529755 | Msa1283150:three_prime_UTR | 40.0% | |
| AGCTATTGTGCTCCTCTTAT+TGG | + | chr8_3:24529767-24529786 | Msa1283150:three_prime_UTR | 40.0% | |
| TTGGAGTCATGATTCTCAAG+TGG | + | chr8_3:24529786-24529805 | Msa1283150:three_prime_UTR | 40.0% | |
| AAGTCCCTACAATTGTGCTT+GGG | - | chr8_3:24530009-24530028 | None:intergenic | 40.0% | |
| TAAGTCCCTACAATTGTGCT+TGG | - | chr8_3:24530010-24530029 | None:intergenic | 40.0% | |
| TAGGGACTTATCCTCTAATC+TGG | + | chr8_3:24530020-24530039 | Msa1283150:three_prime_UTR | 40.0% | |
| AGGGACTTATCCTCTAATCT+GGG | + | chr8_3:24530021-24530040 | Msa1283150:three_prime_UTR | 40.0% | |
| ACTTATCCTCTAATCTGGGT+AGG | + | chr8_3:24530025-24530044 | Msa1283150:three_prime_UTR | 40.0% | |
| TATAGTCCTACCCAGATTAG+AGG | - | chr8_3:24530034-24530053 | None:intergenic | 40.0% | |
| CAAGGATTGTCCTGGTTGTA+AGG | + | chr8_3:24524298-24524317 | Msa1283150:CDS | 45.0% | |
| ! | TGTTTTCGCTCGCAACGTAT+AGG | + | chr8_3:24524844-24524863 | Msa1283150:intron | 45.0% |
| !! | AGTGTTGGTCTGTTGTACTG+TGG | + | chr8_3:24525426-24525445 | Msa1283150:intron | 45.0% |
| ! | AGCTACTATGCTGGCTATGT+AGG | + | chr8_3:24525622-24525641 | Msa1283150:CDS | 45.0% |
| GGAATGGTTTCTGATCGCTA+TGG | + | chr8_3:24525774-24525793 | Msa1283150:CDS | 45.0% | |
| ! | TCGGCCTTAGTACGAGTTTT+TGG | + | chr8_3:24525980-24525999 | Msa1283150:CDS | 45.0% |
| TGGTGCAATTGGACCAGTAA+AGG | + | chr8_3:24526041-24526060 | Msa1283150:CDS | 45.0% | |
| TGTGCAGCTGGATACATAAC+TGG | + | chr8_3:24526155-24526174 | Msa1283150:intron | 45.0% | |
| !!! | GGTTTTAGGTAAGTGCAGCT+TGG | + | chr8_3:24526513-24526532 | Msa1283150:intron | 45.0% |
| ATGAAGCAGGGCAAGAAGTA+AGG | - | chr8_3:24527111-24527130 | None:intergenic | 45.0% | |
| TATTGCCTGCTTGTGGATTC+CGG | + | chr8_3:24527158-24527177 | Msa1283150:CDS | 45.0% | |
| CCCTTCATAGCAATGTTGTC+AGG | + | chr8_3:24527909-24527928 | Msa1283150:CDS | 45.0% | |
| GCCTGACAACATTGCTATGA+AGG | - | chr8_3:24527913-24527932 | None:intergenic | 45.0% | |
| TGAATACACTCACCACTGCT+CGG | - | chr8_3:24528145-24528164 | None:intergenic | 45.0% | |
| TTCCATTAGCTGCTCCTCTT+TGG | - | chr8_3:24528304-24528323 | None:intergenic | 45.0% | |
| AACTCACATTGTACCACCTG+CGG | - | chr8_3:24528369-24528388 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8_3:24529274-24529293 | Msa1283150:intron | 45.0% |
| GTTGAAAGGAAAGAGGATGC+TGG | + | chr8_3:24529743-24529762 | Msa1283150:three_prime_UTR | 45.0% | |
| ATGTCCCCAAGCACAATTGT+AGG | + | chr8_3:24530001-24530020 | Msa1283150:three_prime_UTR | 45.0% | |
| TGTCCCCAAGCACAATTGTA+GGG | + | chr8_3:24530002-24530021 | Msa1283150:three_prime_UTR | 45.0% | |
| AGTCCCTACAATTGTGCTTG+GGG | - | chr8_3:24530008-24530027 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTGAA+AGG | - | chr8_3:24528686-24528705 | None:intergenic | 5.0% |
| GCTTGGTCAACCTTACAACC+AGG | - | chr8_3:24524311-24524330 | None:intergenic | 50.0% | |
| GCATGTAGCGAGTCCAATCT+CGG | + | chr8_3:24524568-24524587 | Msa1283150:intron | 50.0% | |
| CGAGAAGAACACCAAGCTCT+AGG | + | chr8_3:24526267-24526286 | Msa1283150:CDS | 50.0% | |
| CTGTTGAGAGTCCTAGAGCT+TGG | - | chr8_3:24526281-24526300 | None:intergenic | 50.0% | |
| ! | ATCATTGGACCAGCATTGGG+AGG | + | chr8_3:24526548-24526567 | Msa1283150:CDS | 50.0% |
| ! | ACCAGCATTGGGAGGCTATT+TGG | + | chr8_3:24526556-24526575 | Msa1283150:CDS | 50.0% |
| ! | ATTGGGAGGCTATTTGGCTC+AGG | + | chr8_3:24526562-24526581 | Msa1283150:CDS | 50.0% |
| ACTTACCGGAATCCACAAGC+AGG | - | chr8_3:24527166-24527185 | None:intergenic | 50.0% | |
| CCACTGCTCGGTTCTGTAAA+AGG | - | chr8_3:24528133-24528152 | None:intergenic | 50.0% | |
| ! | CCTTTTACAGAACCGAGCAG+TGG | + | chr8_3:24528130-24528149 | Msa1283150:CDS | 50.0% |
| CACCAAAGAGGAGCAGCTAA+TGG | + | chr8_3:24528299-24528318 | Msa1283150:CDS | 50.0% | |
| ATGGATGCTTCTTTCCTCCC+AGG | + | chr8_3:24528800-24528819 | Msa1283150:CDS | 50.0% | |
| AGTTGAGGATCATACCTGGG+AGG | - | chr8_3:24528817-24528836 | None:intergenic | 50.0% | |
| GGTTTATGGTACGGCCTAAG+TGG | - | chr8_3:24529354-24529373 | None:intergenic | 50.0% | |
| GTAAGTGCAGCTTGGGGAAC+AGG | + | chr8_3:24526521-24526540 | Msa1283150:CDS | 55.0% | |
| GCCAAATAGCCTCCCAATGC+TGG | - | chr8_3:24526560-24526579 | None:intergenic | 55.0% | |
| AAAGCTATTGGACCTGCCGC+AGG | + | chr8_3:24528350-24528369 | Msa1283150:CDS | 55.0% | |
| CACATTGTACCACCTGCGGC+AGG | - | chr8_3:24528365-24528384 | None:intergenic | 60.0% | |
| ! | CAGGTGCTAGCCTAGTGCAG+TGG | - | chr8_3:24528894-24528913 | None:intergenic | 60.0% |
| GCTATTGGACCTGCCGCAGG+TGG | + | chr8_3:24528353-24528372 | Msa1283150:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 24524077 | 24530078 | 24524077 | ID=Msa1283150;Name=Msa1283150 |
| chr8_3 | mRNA | 24524077 | 24530078 | 24524077 | ID=Msa1283150-mRNA-1;Parent=Msa1283150;Name=Msa1283150-mRNA-1;_AED=0.34;_eAED=0.33;_QI=171|0.92|0.93|1|0.92|0.93|15|488|497 |
| chr8_3 | exon | 24524077 | 24524398 | 24524077 | ID=Msa1283150-mRNA-1:exon:8660;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24525240 | 24525280 | 24525240 | ID=Msa1283150-mRNA-1:exon:8661;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24525583 | 24525643 | 24525583 | ID=Msa1283150-mRNA-1:exon:8662;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24525730 | 24525832 | 24525730 | ID=Msa1283150-mRNA-1:exon:8663;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24525960 | 24526062 | 24525960 | ID=Msa1283150-mRNA-1:exon:8664;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24526246 | 24526299 | 24526246 | ID=Msa1283150-mRNA-1:exon:8665;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24526521 | 24526583 | 24526521 | ID=Msa1283150-mRNA-1:exon:8666;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24527104 | 24527448 | 24527104 | ID=Msa1283150-mRNA-1:exon:8667;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24527532 | 24527619 | 24527532 | ID=Msa1283150-mRNA-1:exon:8668;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24527704 | 24527789 | 24527704 | ID=Msa1283150-mRNA-1:exon:8669;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24527879 | 24527986 | 24527879 | ID=Msa1283150-mRNA-1:exon:8670;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24528107 | 24528151 | 24528107 | ID=Msa1283150-mRNA-1:exon:8671;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24528293 | 24528381 | 24528293 | ID=Msa1283150-mRNA-1:exon:8672;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24528778 | 24528821 | 24528778 | ID=Msa1283150-mRNA-1:exon:8673;Parent=Msa1283150-mRNA-1 |
| chr8_3 | exon | 24529478 | 24530078 | 24529478 | ID=Msa1283150-mRNA-1:exon:8674;Parent=Msa1283150-mRNA-1 |
| chr8_3 | five_prime_UTR | 24524077 | 24524247 | 24524077 | ID=Msa1283150-mRNA-1:five_prime_utr;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24524248 | 24524398 | 24524248 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24525240 | 24525280 | 24525240 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24525583 | 24525643 | 24525583 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24525730 | 24525832 | 24525730 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24525960 | 24526062 | 24525960 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24526246 | 24526299 | 24526246 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24526521 | 24526583 | 24526521 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24527104 | 24527448 | 24527104 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24527532 | 24527619 | 24527532 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24527704 | 24527789 | 24527704 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24527879 | 24527986 | 24527879 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24528107 | 24528151 | 24528107 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24528293 | 24528381 | 24528293 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24528778 | 24528821 | 24528778 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | CDS | 24529478 | 24529590 | 24529478 | ID=Msa1283150-mRNA-1:cds;Parent=Msa1283150-mRNA-1 |
| chr8_3 | three_prime_UTR | 24529591 | 24530078 | 24529591 | ID=Msa1283150-mRNA-1:three_prime_utr;Parent=Msa1283150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
