Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241990 | XP_013445183.1 | 97.131 | 488 | 13 | 1 | 1 | 488 | 1 | 487 | 0.0 | 967 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241990 | sp|Q94BZ1|ZIFL1_ARATH | 56.458 | 480 | 203 | 3 | 4 | 481 | 3 | 478 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010760 | Msa1241990 | 0.830181 | 3.393167e-55 | -8.615850e-47 |
| Msa0090910 | Msa1241990 | 0.803916 | 2.774622e-49 | -8.615850e-47 |
| Msa0801360 | Msa1241990 | 0.801594 | 8.363775e-49 | -8.615850e-47 |
| Msa0839830 | Msa1241990 | 0.801689 | 7.996086e-49 | -8.615850e-47 |
| Msa0138220 | Msa1241990 | 0.848218 | 7.051223e-60 | -8.615850e-47 |
| Msa0183410 | Msa1241990 | 0.848700 | 5.186518e-60 | -8.615850e-47 |
| Msa1241990 | Msa1283150 | 0.912423 | 1.980804e-83 | -8.615850e-47 |
| Msa1241990 | Msa1322400 | 0.939294 | 1.617830e-99 | -8.615850e-47 |
| Msa1187780 | Msa1241990 | 0.945952 | 1.160879e-104 | -8.615850e-47 |
| Msa0570330 | Msa1241990 | 0.803275 | 3.767505e-49 | -8.615850e-47 |
| Msa0944550 | Msa1241990 | 0.804278 | 2.332917e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241990 | MtrunA17_Chr8g0354831 | 97.131 | 488 | 13 | 1 | 1 | 488 | 1 | 487 | 0.0 | 967 |
| Msa1241990 | MtrunA17_Chr8g0354841 | 81.120 | 482 | 87 | 2 | 7 | 488 | 3 | 480 | 0.0 | 824 |
| Msa1241990 | MtrunA17_Chr8g0354851 | 77.844 | 501 | 88 | 3 | 7 | 488 | 3 | 499 | 0.0 | 805 |
| Msa1241990 | MtrunA17_Chr8g0354891 | 79.508 | 488 | 96 | 2 | 1 | 488 | 1 | 484 | 0.0 | 799 |
| Msa1241990 | MtrunA17_Chr3g0080421 | 70.552 | 489 | 141 | 3 | 1 | 488 | 1 | 487 | 0.0 | 729 |
| Msa1241990 | MtrunA17_Chr3g0080431 | 64.570 | 477 | 165 | 1 | 4 | 480 | 2 | 474 | 0.0 | 649 |
| Msa1241990 | MtrunA17_Chr8g0364441 | 59.146 | 492 | 121 | 6 | 1 | 452 | 1 | 452 | 0.0 | 574 |
| Msa1241990 | MtrunA17_Chr8g0354861 | 80.132 | 302 | 56 | 2 | 151 | 452 | 6 | 303 | 7.02e-177 | 499 |
| Msa1241990 | MtrunA17_Chr3g0123421 | 71.770 | 209 | 58 | 1 | 1 | 209 | 1 | 208 | 5.60e-104 | 309 |
| Msa1241990 | MtrunA17_Chr3g0123441 | 71.304 | 115 | 33 | 0 | 342 | 456 | 1 | 115 | 1.78e-53 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241990 | AT5G13750.1 | 56.458 | 480 | 203 | 3 | 4 | 481 | 3 | 478 | 0.0 | 573 |
| Msa1241990 | AT3G43790.1 | 53.830 | 483 | 211 | 4 | 1 | 478 | 1 | 476 | 0.0 | 547 |
| Msa1241990 | AT3G43790.4 | 53.830 | 483 | 211 | 4 | 1 | 478 | 1 | 476 | 0.0 | 547 |
| Msa1241990 | AT3G43790.2 | 53.170 | 489 | 211 | 5 | 1 | 478 | 1 | 482 | 0.0 | 540 |
| Msa1241990 | AT3G43790.3 | 53.170 | 489 | 211 | 5 | 1 | 478 | 1 | 482 | 0.0 | 540 |
| Msa1241990 | AT5G13740.1 | 53.099 | 484 | 221 | 2 | 4 | 481 | 3 | 486 | 0.0 | 536 |
| Msa1241990 | AT5G13740.2 | 53.636 | 440 | 198 | 2 | 4 | 437 | 3 | 442 | 2.65e-172 | 492 |
| Msa1241990 | AT5G13750.2 | 55.949 | 395 | 169 | 2 | 89 | 481 | 1 | 392 | 8.51e-165 | 471 |
| Msa1241990 | AT5G13750.3 | 53.753 | 413 | 185 | 3 | 4 | 414 | 3 | 411 | 4.66e-164 | 470 |
| Msa1241990 | AT5G13750.4 | 53.753 | 413 | 185 | 3 | 4 | 414 | 3 | 411 | 4.66e-164 | 470 |
| Msa1241990 | AT3G43790.5 | 52.913 | 412 | 182 | 4 | 1 | 407 | 1 | 405 | 2.02e-157 | 453 |
Find 141 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTGTTAGTCCTCTAAATT+TGG | 0.111977 | 8_2:-25906593 | Msa1241990:CDS |
| GAACCCTTTGGAAAGATATT+TGG | 0.146054 | 8_2:+25907332 | None:intergenic |
| GAACTTTGACATCTGTATTA+TGG | 0.179763 | 8_2:-25908355 | Msa1241990:CDS |
| GGTATAGTATCATAAATAAA+AGG | 0.214410 | 8_2:-25910003 | Msa1241990:five_prime_UTR |
| TGTTATCACAAGATTTCTTT+TGG | 0.235759 | 8_2:-25908097 | Msa1241990:CDS |
| GTATCACAGGGCCATTATTT+AGG | 0.236047 | 8_2:-25905044 | Msa1241990:three_prime_UTR |
| AGCTATTGTGCTTCTCTTAT+TGG | 0.260070 | 8_2:-25904803 | Msa1241990:three_prime_UTR |
| AAATAACTGCATTGTCCTTC+TGG | 0.260368 | 8_2:-25904744 | Msa1241990:three_prime_UTR |
| TCCATCACTTTCCTAAATAA+TGG | 0.262552 | 8_2:+25905033 | None:intergenic |
| AAAACTTGTAGTACCTTTAC+TGG | 0.271588 | 8_2:+25908051 | None:intergenic |
| CCACTGCTCGGTTCTGTATA+AGG | 0.292660 | 8_2:+25906018 | None:intergenic |
| CTTAATTTGGTTGAAGGACT+TGG | 0.297066 | 8_2:-25905162 | Msa1241990:CDS |
| GATGCTGAAGCTATAGAAAA+TGG | 0.297671 | 8_2:-25906837 | Msa1241990:CDS |
| TTCCATTAGCTGCCCCTCTT+TGG | 0.304002 | 8_2:+25905847 | None:intergenic |
| ACTTACAATATACCAATATA+TGG | 0.310859 | 8_2:-25906413 | Msa1241990:CDS |
| AACTTTGACATCTGTATTAT+GGG | 0.312954 | 8_2:-25908354 | Msa1241990:CDS |
| TCTGTTAGTCCTCTAAATTT+GGG | 0.313936 | 8_2:-25906592 | Msa1241990:CDS |
| ATGAAAACCTCTTGATGAAT+TGG | 0.315223 | 8_2:-25906776 | Msa1241990:CDS |
| AGTTGAAACAAAATTTATAA+AGG | 0.329281 | 8_2:+25904715 | None:intergenic |
| TTGCCCTGCTTCATAATATC+AGG | 0.334714 | 8_2:-25907022 | Msa1241990:CDS |
| CTATGTAAGTTATAATGTTT+AGG | 0.335174 | 8_2:-25904272 | Msa1241990:three_prime_UTR |
| GGTAATGTTCTTGCAATTAC+AGG | 0.337198 | 8_2:-25906541 | Msa1241990:intron |
| TAGGGACTTATCCTCTAATC+TGG | 0.339960 | 8_2:-25904182 | Msa1241990:three_prime_UTR |
| TCTTTCCAAAGGGTTCCTTT+TGG | 0.343617 | 8_2:-25907325 | Msa1241990:CDS |
| CAAGTCCTTCAACCAAATTA+AGG | 0.346986 | 8_2:+25905163 | None:intergenic |
| TATTGCCTGCTTGTGGATTC+CGG | 0.349430 | 8_2:-25906981 | Msa1241990:intron |
| TATAACTTACATAGAATTGT+AGG | 0.350436 | 8_2:+25904281 | None:intergenic |
| TTCTTCCTTAATTTGGTTGA+AGG | 0.351724 | 8_2:-25905168 | Msa1241990:CDS |
| GTAAGTGCAGCTTGGGGAAC+AGG | 0.372551 | 8_2:-25907638 | Msa1241990:CDS |
| GGTTTAGGTAAGTGCAGCTT+GGG | 0.372706 | 8_2:-25907645 | Msa1241990:intron |
| GGAACTTTAAATGGTGCAAT+TGG | 0.374218 | 8_2:-25908075 | Msa1241990:CDS |
| AAAACACCAATGACTATAAC+AGG | 0.374710 | 8_2:+25908302 | None:intergenic |
| AGCAATGATAGATGACATAA+AGG | 0.379944 | 8_2:+25906752 | None:intergenic |
| GGAGAAGAAGCAATACTATA+AGG | 0.388545 | 8_2:-25909894 | Msa1241990:CDS |
| TGGGGAACAGGTTTAATCAT+TGG | 0.389285 | 8_2:-25907626 | Msa1241990:CDS |
| TTGATATCAGACAACTTTGC+AGG | 0.391174 | 8_2:-25905076 | Msa1241990:exon |
| TTGAATTTATATTAAAAGAA+TGG | 0.393445 | 8_2:+25904223 | None:intergenic |
| ATACACTCACCATGAAATAA+AGG | 0.395654 | 8_2:+25908910 | None:intergenic |
| TAAGAGAAATGAATCTCAAA+TGG | 0.396521 | 8_2:-25904682 | Msa1241990:three_prime_UTR |
| TTATCCCAAAAGGAACCCTT+TGG | 0.400052 | 8_2:+25907320 | None:intergenic |
| CACCAAAGAGGGGCAGCTAA+TGG | 0.408771 | 8_2:-25905849 | Msa1241990:CDS |
| CGAAAACCTGTTATAGTCAT+TGG | 0.412171 | 8_2:-25908308 | Msa1241990:CDS |
| GTGATTCGAGCAATGTTAAC+AGG | 0.415919 | 8_2:+25906376 | None:intergenic |
| TAAGGATTGTCCTGGTTGTA+AGG | 0.418630 | 8_2:-25909876 | Msa1241990:CDS |
| ATATTTGGATATTTCTCTGC+TGG | 0.421967 | 8_2:+25907347 | None:intergenic |
| TATATTCCTACCCAGATTAG+AGG | 0.423673 | 8_2:+25904171 | None:intergenic |
| AAGCAAATGAAAAGCTATAG+AGG | 0.424418 | 8_2:-25904854 | Msa1241990:three_prime_UTR |
| AAGTCCCTACAATTGTGCTT+GGG | 0.439634 | 8_2:+25904196 | None:intergenic |
| AGAGTTCATTGAGAAACTCT+TGG | 0.444244 | 8_2:+25910059 | None:intergenic |
| TTAATCATTGGACCAGCATT+GGG | 0.448070 | 8_2:-25907614 | Msa1241990:CDS |
| AACAGGAACAACACCAAAGA+GGG | 0.450572 | 8_2:-25905860 | Msa1241990:intron |
| ATATCCCCAAGCACAATTGT+AGG | 0.454252 | 8_2:-25904201 | Msa1241990:three_prime_UTR |
| TATAGAAAATGGAAGCATAA+AGG | 0.454633 | 8_2:-25906826 | Msa1241990:CDS |
| CCCTTCATAGCAATGTTGTC+AGG | 0.454765 | 8_2:-25906239 | Msa1241990:CDS |
| TTTAATCATTGGACCAGCAT+TGG | 0.458138 | 8_2:-25907615 | Msa1241990:CDS |
| AACTCCTGATATTATGAAGC+AGG | 0.459270 | 8_2:+25907018 | None:intergenic |
| AAAGCCATTGGACCTGCTGC+TGG | 0.461289 | 8_2:-25905798 | Msa1241990:CDS |
| GCTAAATAGCCTCCCAATGC+TGG | 0.464002 | 8_2:+25907602 | None:intergenic |
| GTTAACATTGCTCGAATCAC+AGG | 0.464230 | 8_2:-25906373 | Msa1241990:CDS |
| GCCTGACAACATTGCTATGA+AGG | 0.464502 | 8_2:+25906238 | None:intergenic |
| CTATAGAGGGATAGTTGAAA+GGG | 0.468103 | 8_2:-25904840 | Msa1241990:three_prime_UTR |
| AAGGAATAAACCTGTTGTAA+TGG | 0.468522 | 8_2:+25906037 | None:intergenic |
| AGCTACTATGCTGGCTATGT+AGG | 0.471772 | 8_2:-25908484 | Msa1241990:intron |
| CAGGAGTTATGTAGTATCAC+AGG | 0.477891 | 8_2:-25905057 | Msa1241990:three_prime_UTR |
| ATGATGTTCAAACCATTCCT+TGG | 0.480456 | 8_2:-25905132 | Msa1241990:CDS |
| CGAGAAGAACACCAAGCTCT+AGG | 0.480505 | 8_2:-25907893 | Msa1241990:CDS |
| TTTGTTTATGCAGATTAACT+TGG | 0.481451 | 8_2:-25905646 | Msa1241990:intron |
| ATGAAGCAGGGCAAGAAGTA+AGG | 0.481618 | 8_2:+25907031 | None:intergenic |
| GTTGAAAGGGAAGAGAATGC+TGG | 0.484782 | 8_2:-25904827 | Msa1241990:three_prime_UTR |
| GACATCTGTATTATGGGGAA+TGG | 0.486093 | 8_2:-25908348 | Msa1241990:CDS |
| GCTATAGAGGGATAGTTGAA+AGG | 0.489250 | 8_2:-25904841 | Msa1241990:three_prime_UTR |
| TTTAACTGCAGGCACCCATA+TGG | 0.489334 | 8_2:-25905196 | Msa1241990:intron |
| AGCTTCAGCATCATCTATGA+TGG | 0.493611 | 8_2:+25906848 | None:intergenic |
| GTATAGTATCATAAATAAAA+GGG | 0.496258 | 8_2:-25910002 | Msa1241990:five_prime_UTR |
| CTGTTAGTCCTCTAAATTTG+GGG | 0.496551 | 8_2:-25906591 | Msa1241990:CDS |
| TAAGTCCCTACAATTGTGCT+TGG | 0.496968 | 8_2:+25904195 | None:intergenic |
| ATTGGGAGGCTATTTAGCTC+AGG | 0.497547 | 8_2:-25907597 | Msa1241990:intron |
| TATATTGGTATATTGTAAGT+TGG | 0.500955 | 8_2:+25906416 | None:intergenic |
| AAATATGAGAGAGCCATTGT+TGG | 0.503789 | 8_2:-25909915 | Msa1241990:CDS |
| ACTTAGGTGACCATTACAAC+AGG | 0.504930 | 8_2:-25906047 | Msa1241990:intron |
| AAACATAATAAATGTTGCAT+TGG | 0.511475 | 8_2:-25905011 | Msa1241990:three_prime_UTR |
| TGGTGCAATTGGACCAGTAA+AGG | 0.511905 | 8_2:-25908064 | Msa1241990:intron |
| TAGTAGTTATTGCCTGCTTG+TGG | 0.513431 | 8_2:-25906988 | Msa1241990:CDS |
| ATGGATGCTTCTTTCCTCCC+AGG | 0.513858 | 8_2:-25905611 | Msa1241990:intron |
| GTCCACTTACTTATCCCAAA+AGG | 0.515628 | 8_2:+25907310 | None:intergenic |
| AAGAGAAATGAATCTCAAAT+GGG | 0.517095 | 8_2:-25904681 | Msa1241990:three_prime_UTR |
| TATTGCTTCTTCTCCAACAA+TGG | 0.519872 | 8_2:+25909902 | None:intergenic |
| GCCATTATTTAGGAAAGTGA+TGG | 0.519896 | 8_2:-25905034 | Msa1241990:three_prime_UTR |
| GCAATGATAGATGACATAAA+GGG | 0.520373 | 8_2:+25906753 | None:intergenic |
| TGGTTTAGGTAAGTGCAGCT+TGG | 0.525939 | 8_2:-25907646 | Msa1241990:intron |
| TATCCAAATATCTTTCCAAA+GGG | 0.526914 | 8_2:-25907335 | Msa1241990:CDS |
| ATGTCTCTCTTCAAAGCCAT+TGG | 0.531099 | 8_2:-25905810 | Msa1241990:CDS |
| CTGTTGAGAGTCCTAGAGCT+TGG | 0.540220 | 8_2:+25907882 | None:intergenic |
| CCTGACAACATTGCTATGAA+GGG | 0.540798 | 8_2:+25906239 | None:intergenic |
| AAGGGGTAACTTTGCAACAA+TGG | 0.549893 | 8_2:+25906257 | None:intergenic |
| GTAGGATCATCATTCATGCT+TGG | 0.553411 | 8_2:-25908380 | Msa1241990:intron |
| GTTAGTCCTCTAAATTTGGG+GGG | 0.555025 | 8_2:-25906589 | Msa1241990:CDS |
| TGTTAGTCCTCTAAATTTGG+GGG | 0.556819 | 8_2:-25906590 | Msa1241990:CDS |
| ATATCCAAATATCTTTCCAA+AGG | 0.563619 | 8_2:-25907336 | Msa1241990:CDS |
| TAAAGGGCCAATTCATCAAG+AGG | 0.566648 | 8_2:+25906769 | None:intergenic |
| TATCCCCAAGCACAATTGTA+GGG | 0.567675 | 8_2:-25904200 | Msa1241990:three_prime_UTR |
| AGCAAATGAAAAGCTATAGA+GGG | 0.567993 | 8_2:-25904853 | Msa1241990:three_prime_UTR |
| ACACACAATATTCATGAGGA+TGG | 0.568497 | 8_2:+25906184 | None:intergenic |
| ATAGTAGCTAATATCAGCCT+CGG | 0.569820 | 8_2:+25908498 | None:intergenic |
| TTAACATTGCTCGAATCACA+GGG | 0.570393 | 8_2:-25906372 | Msa1241990:CDS |
| AACTTGGTCACAAAAGCGTA+TGG | 0.570630 | 8_2:-25905630 | Msa1241990:CDS |
| CACATTGTACCACCAGCAGC+AGG | 0.570958 | 8_2:+25905786 | None:intergenic |
| CAATACTATAAGGATTGTCC+TGG | 0.572453 | 8_2:-25909884 | Msa1241990:CDS |
| TCATGATATTGCTTATCAAG+AGG | 0.581145 | 8_2:-25906712 | Msa1241990:intron |
| CTCACCATGAAATAAAGGAA+TGG | 0.586715 | 8_2:+25908915 | None:intergenic |
| AGTCCCTACAATTGTGCTTG+GGG | 0.588679 | 8_2:+25904197 | None:intergenic |
| TTATAAAGGTTATGACCAGA+AGG | 0.590534 | 8_2:+25904729 | None:intergenic |
| ACCACCAGCAGCAGGTCCAA+TGG | 0.593703 | 8_2:+25905794 | None:intergenic |
| AAACAGGAACAACACCAAAG+AGG | 0.593747 | 8_2:-25905861 | Msa1241990:intron |
| TGAATACACTTACCACTGCT+CGG | 0.594002 | 8_2:+25906006 | None:intergenic |
| ATTAATCTGTCACATAAACA+TGG | 0.594445 | 8_2:-25909945 | Msa1241990:exon |
| ATCATTGGACCAGCATTGGG+AGG | 0.595293 | 8_2:-25907611 | Msa1241990:CDS |
| AGGGACTTATCCTCTAATCT+GGG | 0.595810 | 8_2:-25904181 | Msa1241990:three_prime_UTR |
| ACTCCTGATATTATGAAGCA+GGG | 0.598947 | 8_2:+25907019 | None:intergenic |
| TTGGAGTCATGATTCTCAAG+TGG | 0.599560 | 8_2:-25904784 | Msa1241990:three_prime_UTR |
| GCTTGGTCAACCTTACAACC+AGG | 0.599602 | 8_2:+25909866 | None:intergenic |
| ACTTATCCTCTAATCTGGGT+AGG | 0.601548 | 8_2:-25904177 | Msa1241990:three_prime_UTR |
| GCTGATATTAGCTACTATGC+TGG | 0.603154 | 8_2:-25908493 | Msa1241990:CDS |
| AAGAATGGTAATAATGCAAG+TGG | 0.603462 | 8_2:+25904238 | None:intergenic |
| ATCAGAAAGAGATATATCAA+AGG | 0.617989 | 8_2:+25909966 | None:intergenic |
| GGAATGGTTTCTGATCGCTA+TGG | 0.618861 | 8_2:-25908332 | Msa1241990:CDS |
| ACTTTGACATCTGTATTATG+GGG | 0.630925 | 8_2:-25908353 | Msa1241990:CDS |
| AACTTCACAACTGATGATGT+CGG | 0.634201 | 8_2:-25906562 | Msa1241990:CDS |
| GCCATTGGACCTGCTGCTGG+TGG | 0.641632 | 8_2:-25905795 | Msa1241990:CDS |
| ACATACCGGAATCCACAAGC+AGG | 0.647969 | 8_2:+25906976 | None:intergenic |
| CTGACAACATTGCTATGAAG+GGG | 0.657130 | 8_2:+25906240 | None:intergenic |
| TTAATCTGTCACATAAACAT+GGG | 0.657892 | 8_2:-25909944 | Msa1241990:exon |
| AGGAGTTATGTAGTATCACA+GGG | 0.660220 | 8_2:-25905056 | Msa1241990:three_prime_UTR |
| AGTTGAGCATTGTACCTGGG+AGG | 0.670053 | 8_2:+25905597 | None:intergenic |
| TTACACACACAATATTCATG+AGG | 0.676661 | 8_2:+25906180 | None:intergenic |
| CCTTATACAGAACCGAGCAG+TGG | 0.682906 | 8_2:-25906018 | Msa1241990:intron |
| GAAACACTTCACAAGCACAA+TGG | 0.697668 | 8_2:-25906882 | Msa1241990:CDS |
| GTTTAGGTAAGTGCAGCTTG+GGG | 0.699179 | 8_2:-25907644 | Msa1241990:intron |
| CAAGCAAAAGAGCTTAACCA+AGG | 0.710227 | 8_2:-25909848 | Msa1241990:CDS |
| ACAGGAACAACACCAAAGAG+GGG | 0.717818 | 8_2:-25905859 | Msa1241990:intron |
| TAACATTGCTCGAATCACAG+GGG | 0.777198 | 8_2:-25906371 | Msa1241990:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTAAGAATACAATTTT+TGG | - | chr8_2:25905617-25905636 | Msa1241990:CDS | 10.0% |
| !!! | CTTATTATATATATGTTTTT+TGG | - | chr8_2:25907566-25907585 | Msa1241990:intron | 10.0% |
| !!! | ATTTTTTATTTTGAAGAAAA+TGG | + | chr8_2:25908254-25908273 | None:intergenic | 10.0% |
| !! | TTGAATTTATATTAAAAGAA+TGG | + | chr8_2:25910003-25910022 | None:intergenic | 10.0% |
| !! | GTATAGTATCATAAATAAAA+GGG | - | chr8_2:25904221-25904240 | Msa1241990:three_prime_UTR | 15.0% |
| !! | TTATTCATATACATACAAAA+AGG | + | chr8_2:25905512-25905531 | None:intergenic | 15.0% |
| !! | TTTGTATGTATATGAATAAT+TGG | - | chr8_2:25905513-25905532 | Msa1241990:intron | 15.0% |
| !!! | TATATCATAGTTATTTTCTA+CGG | + | chr8_2:25905996-25906015 | None:intergenic | 15.0% |
| !!! | TACAAGTTTTTAATTAACTA+GGG | - | chr8_2:25906185-25906204 | Msa1241990:CDS | 15.0% |
| !! | CTAATTAAAATTGTGATATA+TGG | - | chr8_2:25906548-25906567 | Msa1241990:CDS | 15.0% |
| !!! | GTTTTATAAAATTGAAAAGT+AGG | + | chr8_2:25906943-25906962 | None:intergenic | 15.0% |
| !!! | TTTCAATTTTATAAAACTCA+AGG | - | chr8_2:25906946-25906965 | Msa1241990:intron | 15.0% |
| !!! | TTCAATTTTATAAAACTCAA+GGG | - | chr8_2:25906947-25906966 | Msa1241990:intron | 15.0% |
| !!! | GGTAAATTTTTTAATCAATA+AGG | - | chr8_2:25907532-25907551 | Msa1241990:intron | 15.0% |
| !!! | AGAGTTTAAGATATATTAAA+TGG | - | chr8_2:25908111-25908130 | Msa1241990:CDS | 15.0% |
| !!! | ATTAGATTTTAATGGAATTA+TGG | - | chr8_2:25908323-25908342 | Msa1241990:CDS | 15.0% |
| !!! | TTACAGTTAATTTAGTTTTA+TGG | + | chr8_2:25908928-25908947 | None:intergenic | 15.0% |
| !! | AGTTGAAACAAAATTTATAA+AGG | + | chr8_2:25909511-25909530 | None:intergenic | 15.0% |
| !! | GGTATAGTATCATAAATAAA+AGG | - | chr8_2:25904220-25904239 | Msa1241990:three_prime_UTR | 20.0% |
| !!! | TGTATCCATTAAAAATCTTT+TGG | - | chr8_2:25904398-25904417 | Msa1241990:intron | 20.0% |
| !!! | TATGACCAAAAGATTTTTAA+TGG | + | chr8_2:25904406-25904425 | None:intergenic | 20.0% |
| !!! | TTAAAAATCTTTTGGTCATA+TGG | - | chr8_2:25904406-25904425 | Msa1241990:intron | 20.0% |
| !! | AGTAAAAAGGAAAATGAAAT+TGG | + | chr8_2:25905362-25905381 | None:intergenic | 20.0% |
| !!! | TAAGAATACAATTTTTGGTT+AGG | - | chr8_2:25905622-25905641 | Msa1241990:CDS | 20.0% |
| !!! | AACATTTAATTTTCAGGTAA+GGG | - | chr8_2:25905684-25905703 | Msa1241990:intron | 20.0% |
| !!! | CTACAAGTTTTTAATTAACT+AGG | - | chr8_2:25906184-25906203 | Msa1241990:CDS | 20.0% |
| !!! | CACAATTTTAATTAGTATGA+TGG | + | chr8_2:25906543-25906562 | None:intergenic | 20.0% |
| !!! | ATTGTGATATATGGTTTTAT+TGG | - | chr8_2:25906557-25906576 | Msa1241990:CDS | 20.0% |
| !!! | ATATATGGTTTTATTGGTTT+AGG | - | chr8_2:25906563-25906582 | Msa1241990:CDS | 20.0% |
| !!! | TAATCATTTGTTGTGAAAAA+TGG | + | chr8_2:25907163-25907182 | None:intergenic | 20.0% |
| !! | TATATTGGTATATTGTAAGT+TGG | + | chr8_2:25907810-25907829 | None:intergenic | 20.0% |
| !! | ACTTACAATATACCAATATA+TGG | - | chr8_2:25907810-25907829 | Msa1241990:intron | 20.0% |
| !!! | AGTTTGGTATTAGATTTTAA+TGG | - | chr8_2:25908315-25908334 | Msa1241990:CDS | 20.0% |
| !!! | GAATTTTTTTGATATATCTC+AGG | + | chr8_2:25908766-25908785 | None:intergenic | 20.0% |
| !! | AAACATAATAAATGTTGCAT+TGG | - | chr8_2:25909212-25909231 | Msa1241990:intron | 20.0% |
| !! | AAACATAATAAATGTTGCAT+TGG | - | chr8_2:25909212-25909231 | Msa1241990:intron | 20.0% |
| !! | AAATGGGAATATAAAGATTA+CGG | - | chr8_2:25909558-25909577 | Msa1241990:intron | 20.0% |
| !! | TTGAATAATAAGGGTAAATA+TGG | + | chr8_2:25909769-25909788 | None:intergenic | 20.0% |
| !! | TATAACTTACATAGAATTGT+AGG | + | chr8_2:25909945-25909964 | None:intergenic | 20.0% |
| !! | CTATGTAAGTTATAATGTTT+AGG | - | chr8_2:25909951-25909970 | Msa1241990:five_prime_UTR | 20.0% |
| ! | ATCAGAAAGAGATATATCAA+AGG | + | chr8_2:25904260-25904279 | None:intergenic | 25.0% |
| ! | ATTAATCTGTCACATAAACA+TGG | - | chr8_2:25904278-25904297 | Msa1241990:three_prime_UTR | 25.0% |
| ! | TTAATCTGTCACATAAACAT+GGG | - | chr8_2:25904279-25904298 | Msa1241990:three_prime_UTR | 25.0% |
| !! | AAGAAGTATATGAAATCAAG+AGG | + | chr8_2:25904467-25904486 | None:intergenic | 25.0% |
| !! | TTCTCCAATTTTTGTTCATT+AGG | - | chr8_2:25904508-25904527 | Msa1241990:intron | 25.0% |
| ! | AAGTCCTAATGAACAAAAAT+TGG | + | chr8_2:25904515-25904534 | None:intergenic | 25.0% |
| !! | CATTTGAGTTTCCTTTATTA+AGG | - | chr8_2:25904767-25904786 | Msa1241990:three_prime_UTR | 25.0% |
| !! | ACAAACTTTTGCCTTAATAA+AGG | + | chr8_2:25904781-25904800 | None:intergenic | 25.0% |
| ! | TTGTAAAAAGAGAGAAAATG+TGG | - | chr8_2:25904797-25904816 | Msa1241990:three_prime_UTR | 25.0% |
| ! | TGTAAAAAGAGAGAAAATGT+GGG | - | chr8_2:25904798-25904817 | Msa1241990:three_prime_UTR | 25.0% |
| ! | TGTAATCAATAAGAGAGAAT+AGG | - | chr8_2:25904919-25904938 | Msa1241990:intron | 25.0% |
| !!! | TTTTCCATTCCTTTATTTCA+TGG | - | chr8_2:25905304-25905323 | Msa1241990:intron | 25.0% |
| ! | ACATAATACAATCTTCAATG+AGG | - | chr8_2:25905660-25905679 | Msa1241990:intron | 25.0% |
| !!! | CAACATTTAATTTTCAGGTA+AGG | - | chr8_2:25905683-25905702 | Msa1241990:intron | 25.0% |
| !!! | TTTTAAAATTGCAAAATCCG+AGG | - | chr8_2:25905708-25905727 | Msa1241990:intron | 25.0% |
| ! | AACTTTGACATCTGTATTAT+GGG | - | chr8_2:25905869-25905888 | Msa1241990:intron | 25.0% |
| !! | TGTTATCACAAGATTTCTTT+TGG | - | chr8_2:25906126-25906145 | Msa1241990:intron | 25.0% |
| !! | GTTATCACAAGATTTCTTTT+GGG | - | chr8_2:25906127-25906146 | Msa1241990:intron | 25.0% |
| !!! | TTTCTTTTGGGAACTTTAAA+TGG | - | chr8_2:25906139-25906158 | Msa1241990:intron | 25.0% |
| ! | TTGAATACAAACAAAGTTTC+AGG | + | chr8_2:25906671-25906690 | None:intergenic | 25.0% |
| ! | TATTCAATTGAGAAGTTTGA+AGG | - | chr8_2:25906684-25906703 | Msa1241990:intron | 25.0% |
| !! | ATTTTCCATGACCAAATAAA+TGG | - | chr8_2:25906725-25906744 | Msa1241990:CDS | 25.0% |
| ! | ATTGCAAAAGACCATTTATT+TGG | + | chr8_2:25906739-25906758 | None:intergenic | 25.0% |
| ! | ATATCCAAATATCTTTCCAA+AGG | - | chr8_2:25906887-25906906 | Msa1241990:intron | 25.0% |
| ! | TATCCAAATATCTTTCCAAA+GGG | - | chr8_2:25906888-25906907 | Msa1241990:intron | 25.0% |
| !!! | ATATCACCTTGTTTTCATTT+TGG | - | chr8_2:25907030-25907049 | Msa1241990:CDS | 25.0% |
| !!! | CGGTTTTATCATATGTTTTA+TGG | - | chr8_2:25907275-25907294 | Msa1241990:intron | 25.0% |
| ! | TAATTGTTTAAACTACATGC+AGG | - | chr8_2:25907319-25907338 | Msa1241990:intron | 25.0% |
| !! | TATAGAAAATGGAAGCATAA+AGG | - | chr8_2:25907397-25907416 | Msa1241990:intron | 25.0% |
| !!! | TACTAACTTGTGAAATTTTC+AGG | - | chr8_2:25907766-25907785 | Msa1241990:intron | 25.0% |
| ! | CTCTCAATATTAGTCATAAA+TGG | + | chr8_2:25908095-25908114 | None:intergenic | 25.0% |
| ! | AGAATACAATCAGTCAAATT+TGG | + | chr8_2:25908147-25908166 | None:intergenic | 25.0% |
| !! | ACTGATTGTATTCTTTTCTA+TGG | - | chr8_2:25908153-25908172 | Msa1241990:intron | 25.0% |
| !! | AATTATGGCACATATTGATT+TGG | - | chr8_2:25908338-25908357 | Msa1241990:CDS | 25.0% |
| ! | TTTGTTTATGCAGATTAACT+TGG | - | chr8_2:25908577-25908596 | Msa1241990:intron | 25.0% |
| !! | TAAGCACTTATAAACCATTT+TGG | - | chr8_2:25908810-25908829 | Msa1241990:intron | 25.0% |
| !! | AAGCACTTATAAACCATTTT+GGG | - | chr8_2:25908811-25908830 | Msa1241990:intron | 25.0% |
| ! | TAAGAGAAATGAATCTCAAA+TGG | - | chr8_2:25909541-25909560 | Msa1241990:intron | 25.0% |
| ! | AAGAGAAATGAATCTCAAAT+GGG | - | chr8_2:25909542-25909561 | Msa1241990:intron | 25.0% |
| !!! | GCTTTTGCTTTGAATAATAA+GGG | + | chr8_2:25909778-25909797 | None:intergenic | 25.0% |
| !!! | AGCTTTTGCTTTGAATAATA+AGG | + | chr8_2:25909779-25909798 | None:intergenic | 25.0% |
| TATACCAACTGAAAAAGAAG+TGG | + | chr8_2:25904206-25904225 | None:intergenic | 30.0% | |
| !! | GATTTTTAATGGATACACCT+TGG | + | chr8_2:25904395-25904414 | None:intergenic | 30.0% |
| ! | AAATCTTTTGGTCATATGGA+TGG | - | chr8_2:25904410-25904429 | Msa1241990:intron | 30.0% |
| AATAATTAGCTAGCCAATGT+GGG | + | chr8_2:25904998-25905017 | None:intergenic | 30.0% | |
| AAATAATTAGCTAGCCAATG+TGG | + | chr8_2:25904999-25905018 | None:intergenic | 30.0% | |
| AATCTCTGCATTTCTTACTA+GGG | + | chr8_2:25905168-25905187 | None:intergenic | 30.0% | |
| AAATCTCTGCATTTCTTACT+AGG | + | chr8_2:25905169-25905188 | None:intergenic | 30.0% | |
| GCTGAAAATGACAACAAAAA+AGG | + | chr8_2:25905266-25905285 | None:intergenic | 30.0% | |
| ATACACTCACCATGAAATAA+AGG | + | chr8_2:25905316-25905335 | None:intergenic | 30.0% | |
| CAAAAAGGATACTCAAAAAC+TGG | + | chr8_2:25905497-25905516 | None:intergenic | 30.0% | |
| !! | TGAGGCAACATTTAATTTTC+AGG | - | chr8_2:25905678-25905697 | Msa1241990:intron | 30.0% |
| TGATAAAAGACTTCAAAGAG+TGG | + | chr8_2:25905785-25905804 | None:intergenic | 30.0% | |
| CATTGTTATAAGTTGTTCAC+TGG | - | chr8_2:25905803-25905822 | Msa1241990:CDS | 30.0% | |
| GTGATGATTGAAAATGTTGT+AGG | - | chr8_2:25905825-25905844 | Msa1241990:CDS | 30.0% | |
| GAACTTTGACATCTGTATTA+TGG | - | chr8_2:25905868-25905887 | Msa1241990:intron | 30.0% | |
| ACTTTGACATCTGTATTATG+GGG | - | chr8_2:25905870-25905889 | Msa1241990:intron | 30.0% | |
| AAAACACCAATGACTATAAC+AGG | + | chr8_2:25905924-25905943 | None:intergenic | 30.0% | |
| AAAACTTGTAGTACCTTTAC+TGG | + | chr8_2:25906175-25906194 | None:intergenic | 30.0% | |
| !! | TTTTCAACTTCGGTTTGAAT+GGG | + | chr8_2:25906485-25906504 | None:intergenic | 30.0% |
| AAAGACCATTTATTTGGTCA+TGG | + | chr8_2:25906733-25906752 | None:intergenic | 30.0% | |
| ATATTTGGATATTTCTCTGC+TGG | + | chr8_2:25906879-25906898 | None:intergenic | 30.0% | |
| ! | ATAAAACTCAAGGGTTTGTT+TGG | - | chr8_2:25906956-25906975 | Msa1241990:intron | 30.0% |
| GAGTAACCAAAATGAAAACA+AGG | + | chr8_2:25907039-25907058 | None:intergenic | 30.0% | |
| TTGAATACTTAGTGTCTGTT+TGG | + | chr8_2:25907118-25907137 | None:intergenic | 30.0% | |
| AGACACTAAGTATTCAACTA+TGG | - | chr8_2:25907121-25907140 | Msa1241990:intron | 30.0% | |
| GAAAAATGGAAATCCACATA+TGG | + | chr8_2:25907149-25907168 | None:intergenic | 30.0% | |
| TTCACAACAAATGATTATGC+AGG | - | chr8_2:25907166-25907185 | Msa1241990:intron | 30.0% | |
| ATAAAACCGATGATACATAC+CGG | + | chr8_2:25907264-25907283 | None:intergenic | 30.0% | |
| ATGAAAACCTCTTGATGAAT+TGG | - | chr8_2:25907447-25907466 | Msa1241990:intron | 30.0% | |
| GCAATGATAGATGACATAAA+GGG | + | chr8_2:25907473-25907492 | None:intergenic | 30.0% | |
| AGCAATGATAGATGACATAA+AGG | + | chr8_2:25907474-25907493 | None:intergenic | 30.0% | |
| TCATGATATTGCTTATCAAG+AGG | - | chr8_2:25907511-25907530 | Msa1241990:intron | 30.0% | |
| ACAAAGAGAAAACCTAAAGA+AGG | + | chr8_2:25907609-25907628 | None:intergenic | 30.0% | |
| !! | TTCTTTAGGTTTTCTCTTTG+TGG | - | chr8_2:25907608-25907627 | Msa1241990:CDS | 30.0% |
| TCTGTTAGTCCTCTAAATTT+GGG | - | chr8_2:25907631-25907650 | Msa1241990:CDS | 30.0% | |
| !! | CACAAGCTTTTTCCATATAT+TGG | + | chr8_2:25907825-25907844 | None:intergenic | 30.0% |
| CAATATATGGAAAAAGCTTG+TGG | - | chr8_2:25907823-25907842 | Msa1241990:intron | 30.0% | |
| GTATAGAAAAAATCTGCACA+TGG | + | chr8_2:25907947-25907966 | None:intergenic | 30.0% | |
| TTACACACACAATATTCATG+AGG | + | chr8_2:25908046-25908065 | None:intergenic | 30.0% | |
| ! | GTATTCTTTTCTATGGACTT+AGG | - | chr8_2:25908160-25908179 | Msa1241990:intron | 30.0% |
| AAGGAATAAACCTGTTGTAA+TGG | + | chr8_2:25908189-25908208 | None:intergenic | 30.0% | |
| !!! | TCTTGTTTTCTCACAAAGTT+TGG | - | chr8_2:25908299-25908318 | Msa1241990:CDS | 30.0% |
| !! | CACATATTGATTTGGAAAAC+AGG | - | chr8_2:25908346-25908365 | Msa1241990:CDS | 30.0% |
| !! | GTCTAGCTTTGTAATCTTAA+GGG | + | chr8_2:25908686-25908705 | None:intergenic | 30.0% |
| !! | TGTCTAGCTTTGTAATCTTA+AGG | + | chr8_2:25908687-25908706 | None:intergenic | 30.0% |
| !! | TATAAACCATTTTGGGAATG+TGG | - | chr8_2:25908818-25908837 | Msa1241990:intron | 30.0% |
| TGTAAATAAGCTCTTCCAAA+CGG | - | chr8_2:25908943-25908962 | Msa1241990:intron | 30.0% | |
| AAGGAAGAAAAAGACCATAT+GGG | + | chr8_2:25909044-25909063 | None:intergenic | 30.0% | |
| TAAGGAAGAAAAAGACCATA+TGG | + | chr8_2:25909045-25909064 | None:intergenic | 30.0% | |
| ! | GGTCTTTTTCTTCCTTAATT+TGG | - | chr8_2:25909048-25909067 | Msa1241990:intron | 30.0% |
| ! | TTCTTCCTTAATTTGGTTGA+AGG | - | chr8_2:25909055-25909074 | Msa1241990:intron | 30.0% |
| TCCATCACTTTCCTAAATAA+TGG | + | chr8_2:25909193-25909212 | None:intergenic | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | - | chr8_2:25909329-25909348 | Msa1241990:intron | 30.0% | |
| AAGCAAATGAAAAGCTATAG+AGG | - | chr8_2:25909369-25909388 | Msa1241990:intron | 30.0% | |
| AGCAAATGAAAAGCTATAGA+GGG | - | chr8_2:25909370-25909389 | Msa1241990:intron | 30.0% | |
| TTATAAAGGTTATGACCAGA+AGG | + | chr8_2:25909497-25909516 | None:intergenic | 30.0% | |
| !!! | AAGAGCTAAAAGCTCTTTTT+TGG | + | chr8_2:25909599-25909618 | None:intergenic | 30.0% |
| TTGACAAAAAAAGCTCTGTT+TGG | - | chr8_2:25909641-25909660 | Msa1241990:intron | 30.0% | |
| AAGAATGGTAATAATGCAAG+TGG | + | chr8_2:25909988-25910007 | None:intergenic | 30.0% | |
| AGAGTTCATTGAGAAACTCT+TGG | + | chr8_2:25904167-25904186 | None:intergenic | 35.0% | |
| !!! | ACAACCACTTCTTTTTCAGT+TGG | - | chr8_2:25904199-25904218 | Msa1241990:three_prime_UTR | 35.0% |
| AAATATGAGAGAGCCATTGT+TGG | - | chr8_2:25904308-25904327 | Msa1241990:intron | 35.0% | |
| TATTGCTTCTTCTCCAACAA+TGG | + | chr8_2:25904324-25904343 | None:intergenic | 35.0% | |
| GGAGAAGAAGCAATACTATA+AGG | - | chr8_2:25904329-25904348 | Msa1241990:intron | 35.0% | |
| CAATACTATAAGGATTGTCC+TGG | - | chr8_2:25904339-25904358 | Msa1241990:intron | 35.0% | |
| AGAGATTAATACTCCGAGAT+TGG | + | chr8_2:25904634-25904653 | None:intergenic | 35.0% | |
| AGATCTTGAAAAAGTTCGTG+CGG | - | chr8_2:25904718-25904737 | Msa1241990:three_prime_UTR | 35.0% | |
| ! | AATGGAAAAAGTGATGATGC+AGG | + | chr8_2:25905293-25905312 | None:intergenic | 35.0% |
| CTCACCATGAAATAAAGGAA+TGG | + | chr8_2:25905311-25905330 | None:intergenic | 35.0% | |
| ATAATTGGTCCTGTAAGTGT+TGG | - | chr8_2:25905528-25905547 | Msa1241990:intron | 35.0% | |
| ATAGTAGCTAATATCAGCCT+CGG | + | chr8_2:25905728-25905747 | None:intergenic | 35.0% | |
| CGAAAACCTGTTATAGTCAT+TGG | - | chr8_2:25905915-25905934 | Msa1241990:intron | 35.0% | |
| GGAACTTTAAATGGTGCAAT+TGG | - | chr8_2:25906148-25906167 | Msa1241990:intron | 35.0% | |
| ATTGAACCAGTTATGTATCC+AGG | + | chr8_2:25906227-25906246 | None:intergenic | 35.0% | |
| ! | AGAGTACTCCTCTATTTAAC+AGG | - | chr8_2:25906287-25906306 | Msa1241990:intron | 35.0% |
| AGCATAAGCCTGTTAAATAG+AGG | + | chr8_2:25906298-25906317 | None:intergenic | 35.0% | |
| !! | GTTTTCAACTTCGGTTTGAA+TGG | + | chr8_2:25906486-25906505 | None:intergenic | 35.0% |
| TTTAATCATTGGACCAGCAT+TGG | - | chr8_2:25906608-25906627 | Msa1241990:CDS | 35.0% | |
| TTAATCATTGGACCAGCATT+GGG | - | chr8_2:25906609-25906628 | Msa1241990:CDS | 35.0% | |
| ! | GAACCCTTTGGAAAGATATT+TGG | + | chr8_2:25906894-25906913 | None:intergenic | 35.0% |
| !!! | TTCCTTTTGGGATAAGTAAG+TGG | - | chr8_2:25906911-25906930 | Msa1241990:intron | 35.0% |
| TTCAACTATGGTTCCATATG+TGG | - | chr8_2:25907133-25907152 | Msa1241990:intron | 35.0% | |
| ACTCCTGATATTATGAAGCA+GGG | + | chr8_2:25907207-25907226 | None:intergenic | 35.0% | |
| AACTCCTGATATTATGAAGC+AGG | + | chr8_2:25907208-25907227 | None:intergenic | 35.0% | |
| GATGCTGAAGCTATAGAAAA+TGG | - | chr8_2:25907386-25907405 | Msa1241990:intron | 35.0% | |
| CATGCTTGTTTACCTTCTTT+AGG | - | chr8_2:25907594-25907613 | Msa1241990:intron | 35.0% | |
| GTCTGTTAGTCCTCTAAATT+TGG | - | chr8_2:25907630-25907649 | Msa1241990:CDS | 35.0% | |
| CTGTTAGTCCTCTAAATTTG+GGG | - | chr8_2:25907632-25907651 | Msa1241990:CDS | 35.0% | |
| TGTTAGTCCTCTAAATTTGG+GGG | - | chr8_2:25907633-25907652 | Msa1241990:CDS | 35.0% | |
| ! | AACTTCACAACTGATGATGT+CGG | - | chr8_2:25907661-25907680 | Msa1241990:intron | 35.0% |
| GGTAATGTTCTTGCAATTAC+AGG | - | chr8_2:25907682-25907701 | Msa1241990:intron | 35.0% | |
| TGCAATTACAGGTGCATATT+CGG | - | chr8_2:25907693-25907712 | Msa1241990:intron | 35.0% | |
| TTAACATTGCTCGAATCACA+GGG | - | chr8_2:25907851-25907870 | Msa1241990:intron | 35.0% | |
| ACACACAATATTCATGAGGA+TGG | + | chr8_2:25908042-25908061 | None:intergenic | 35.0% | |
| ! | ATTAGTTGAGCATTGTACCT+GGG | + | chr8_2:25908632-25908651 | None:intergenic | 35.0% |
| ! | AATTAGTTGAGCATTGTACC+TGG | + | chr8_2:25908633-25908652 | None:intergenic | 35.0% |
| GTTTAACCACATTCCCAAAA+TGG | + | chr8_2:25908827-25908846 | None:intergenic | 35.0% | |
| AAGTGGTTGTTTGAGTGTTA+AGG | + | chr8_2:25908897-25908916 | None:intergenic | 35.0% | |
| ! | GTTTTATGGTACGACATAAG+TGG | + | chr8_2:25908914-25908933 | None:intergenic | 35.0% |
| GTAAATAAGCTCTTCCAAAC+GGG | - | chr8_2:25908944-25908963 | Msa1241990:intron | 35.0% | |
| TTCCAAACGGGTATAATAAG+AGG | - | chr8_2:25908956-25908975 | Msa1241990:intron | 35.0% | |
| ACTATTGTGCATTTAACTGC+AGG | - | chr8_2:25909016-25909035 | Msa1241990:intron | 35.0% | |
| CAAGTCCTTCAACCAAATTA+AGG | + | chr8_2:25909063-25909082 | None:intergenic | 35.0% | |
| ! | CTTAATTTGGTTGAAGGACT+TGG | - | chr8_2:25909061-25909080 | Msa1241990:intron | 35.0% |
| ATGATGTTCAAACCATTCCT+TGG | - | chr8_2:25909091-25909110 | Msa1241990:intron | 35.0% | |
| ! | TTCTTCTTTTCACCAAGGAA+TGG | + | chr8_2:25909106-25909125 | None:intergenic | 35.0% |
| ! | GTGTTTTCTTCTTTTCACCA+AGG | + | chr8_2:25909111-25909130 | None:intergenic | 35.0% |
| TTGATATCAGACAACTTTGC+AGG | - | chr8_2:25909147-25909166 | Msa1241990:intron | 35.0% | |
| AGGAGTTATGTAGTATCACA+GGG | - | chr8_2:25909167-25909186 | Msa1241990:intron | 35.0% | |
| GCCATTATTTAGGAAAGTGA+TGG | - | chr8_2:25909189-25909208 | Msa1241990:intron | 35.0% | |
| CTATAGAGGGATAGTTGAAA+GGG | - | chr8_2:25909383-25909402 | Msa1241990:intron | 35.0% | |
| AGCTATTGTGCTTCTCTTAT+TGG | - | chr8_2:25909420-25909439 | Msa1241990:intron | 35.0% | |
| AAATAACTGCATTGTCCTTC+TGG | - | chr8_2:25909479-25909498 | Msa1241990:intron | 35.0% | |
| ATAAAGATTACGGCTCTGTT+TGG | - | chr8_2:25909568-25909587 | Msa1241990:intron | 35.0% | |
| ACGAGCTTATAGCTTATTTC+AGG | - | chr8_2:25909668-25909687 | Msa1241990:intron | 35.0% | |
| ! | GATAAGCTAGTTGAAGTGTT+TGG | + | chr8_2:25909816-25909835 | None:intergenic | 35.0% |
| ATAGAATTGTAGGCTCTGTT+TGG | + | chr8_2:25909935-25909954 | None:intergenic | 35.0% | |
| TATATTCCTACCCAGATTAG+AGG | + | chr8_2:25910055-25910074 | None:intergenic | 35.0% | |
| TAAGGATTGTCCTGGTTGTA+AGG | - | chr8_2:25904347-25904366 | Msa1241990:intron | 40.0% | |
| ! | CTTGGTTAAGCTCTTTTGCT+TGG | + | chr8_2:25904377-25904396 | None:intergenic | 40.0% |
| CAAGCAAAAGAGCTTAACCA+AGG | - | chr8_2:25904375-25904394 | Msa1241990:intron | 40.0% | |
| GCTAATTGCTAATCCCACAT+TGG | - | chr8_2:25904982-25905001 | Msa1241990:intron | 40.0% | |
| ATGCAACTATGCAAGTTAGG+TGG | + | chr8_2:25905079-25905098 | None:intergenic | 40.0% | |
| GCAATGCAACTATGCAAGTT+AGG | + | chr8_2:25905082-25905101 | None:intergenic | 40.0% | |
| TACAACAGACCAACACTTAC+AGG | + | chr8_2:25905540-25905559 | None:intergenic | 40.0% | |
| GCTGATATTAGCTACTATGC+TGG | - | chr8_2:25905730-25905749 | Msa1241990:intron | 40.0% | |
| GTAGGATCATCATTCATGCT+TGG | - | chr8_2:25905843-25905862 | Msa1241990:CDS | 40.0% | |
| GACATCTGTATTATGGGGAA+TGG | - | chr8_2:25905875-25905894 | Msa1241990:intron | 40.0% | |
| ! | GTCGTTCTCAACACACTTTT+TGG | - | chr8_2:25906079-25906098 | Msa1241990:intron | 40.0% |
| !!! | TTGGCCTTAGTACGAGTTTT+TGG | - | chr8_2:25906098-25906117 | Msa1241990:intron | 40.0% |
| CCATCCAAAAACTCGTACTA+AGG | + | chr8_2:25906105-25906124 | None:intergenic | 40.0% | |
| !! | CCTTAGTACGAGTTTTTGGA+TGG | - | chr8_2:25906102-25906121 | Msa1241990:intron | 40.0% |
| TGTACACCTGGATACATAAC+TGG | - | chr8_2:25906218-25906237 | Msa1241990:CDS | 40.0% | |
| ! | GACGACATGGTTTTCAACTT+CGG | + | chr8_2:25906495-25906514 | None:intergenic | 40.0% |
| CTAAGAACTAGAAGACGACA+TGG | + | chr8_2:25906508-25906527 | None:intergenic | 40.0% | |
| TGGGGAACAGGTTTAATCAT+TGG | - | chr8_2:25906597-25906616 | Msa1241990:CDS | 40.0% | |
| ! | TCTTTCCAAAGGGTTCCTTT+TGG | - | chr8_2:25906898-25906917 | Msa1241990:intron | 40.0% |
| ! | CTTTCCAAAGGGTTCCTTTT+GGG | - | chr8_2:25906899-25906918 | Msa1241990:intron | 40.0% |
| TTATCCCAAAAGGAACCCTT+TGG | + | chr8_2:25906906-25906925 | None:intergenic | 40.0% | |
| GTCCACTTACTTATCCCAAA+AGG | + | chr8_2:25906916-25906935 | None:intergenic | 40.0% | |
| TTGCCCTGCTTCATAATATC+AGG | - | chr8_2:25907201-25907220 | Msa1241990:intron | 40.0% | |
| TAGTAGTTATTGCCTGCTTG+TGG | - | chr8_2:25907235-25907254 | Msa1241990:intron | 40.0% | |
| TGGATTCCGGTATGTATCAT+CGG | - | chr8_2:25907255-25907274 | Msa1241990:intron | 40.0% | |
| GAAACACTTCACAAGCACAA+TGG | - | chr8_2:25907341-25907360 | Msa1241990:CDS | 40.0% | |
| AGCTTCAGCATCATCTATGA+TGG | + | chr8_2:25907378-25907397 | None:intergenic | 40.0% | |
| TAAAGGGCCAATTCATCAAG+AGG | + | chr8_2:25907457-25907476 | None:intergenic | 40.0% | |
| GTTAGTCCTCTAAATTTGGG+GGG | - | chr8_2:25907634-25907653 | Msa1241990:CDS | 40.0% | |
| TTCAATCCCCCCAAATTTAG+AGG | + | chr8_2:25907643-25907662 | None:intergenic | 40.0% | |
| GTGATTCGAGCAATGTTAAC+AGG | + | chr8_2:25907850-25907869 | None:intergenic | 40.0% | |
| GTTAACATTGCTCGAATCAC+AGG | - | chr8_2:25907850-25907869 | Msa1241990:intron | 40.0% | |
| TAACATTGCTCGAATCACAG+GGG | - | chr8_2:25907852-25907871 | Msa1241990:intron | 40.0% | |
| !! | GGGTTAGTTTCATCTGATTG+TGG | - | chr8_2:25907872-25907891 | Msa1241990:intron | 40.0% |
| AAGGGGTAACTTTGCAACAA+TGG | + | chr8_2:25907969-25907988 | None:intergenic | 40.0% | |
| CTGACAACATTGCTATGAAG+GGG | + | chr8_2:25907986-25908005 | None:intergenic | 40.0% | |
| CCTGACAACATTGCTATGAA+GGG | + | chr8_2:25907987-25908006 | None:intergenic | 40.0% | |
| ACTTAGGTGACCATTACAAC+AGG | - | chr8_2:25908176-25908195 | Msa1241990:intron | 40.0% | |
| TGAATACACTTACCACTGCT+CGG | + | chr8_2:25908220-25908239 | None:intergenic | 40.0% | |
| AAACAGGAACAACACCAAAG+AGG | - | chr8_2:25908362-25908381 | Msa1241990:CDS | 40.0% | |
| AACAGGAACAACACCAAAGA+GGG | - | chr8_2:25908363-25908382 | Msa1241990:CDS | 40.0% | |
| ATGTCTCTCTTCAAAGCCAT+TGG | - | chr8_2:25908413-25908432 | Msa1241990:intron | 40.0% | |
| ! | AACTTGGTCACAAAAGCGTA+TGG | - | chr8_2:25908593-25908612 | Msa1241990:intron | 40.0% |
| !! | GTCTAGCTCTGTGATCTTAA+GGG | + | chr8_2:25908719-25908738 | None:intergenic | 40.0% |
| !! | TGTCTAGCTCTGTGATCTTA+AGG | + | chr8_2:25908720-25908739 | None:intergenic | 40.0% |
| TAGACAATCACTACTGCACT+AGG | - | chr8_2:25908734-25908753 | Msa1241990:intron | 40.0% | |
| GACCTCTTATTATACCCGTT+TGG | + | chr8_2:25908961-25908980 | None:intergenic | 40.0% | |
| CAGGAGTTATGTAGTATCAC+AGG | - | chr8_2:25909166-25909185 | Msa1241990:intron | 40.0% | |
| GTATCACAGGGCCATTATTT+AGG | - | chr8_2:25909179-25909198 | Msa1241990:intron | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | - | chr8_2:25909332-25909351 | Msa1241990:intron | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | - | chr8_2:25909333-25909352 | Msa1241990:intron | 40.0% | |
| GCTATAGAGGGATAGTTGAA+AGG | - | chr8_2:25909382-25909401 | Msa1241990:intron | 40.0% | |
| TTGGAGTCATGATTCTCAAG+TGG | - | chr8_2:25909439-25909458 | Msa1241990:intron | 40.0% | |
| ATATCCCCAAGCACAATTGT+AGG | - | chr8_2:25910022-25910041 | Msa1241990:five_prime_UTR | 40.0% | |
| TATCCCCAAGCACAATTGTA+GGG | - | chr8_2:25910023-25910042 | Msa1241990:five_prime_UTR | 40.0% | |
| AAGTCCCTACAATTGTGCTT+GGG | + | chr8_2:25910030-25910049 | None:intergenic | 40.0% | |
| TAAGTCCCTACAATTGTGCT+TGG | + | chr8_2:25910031-25910050 | None:intergenic | 40.0% | |
| TAGGGACTTATCCTCTAATC+TGG | - | chr8_2:25910041-25910060 | Msa1241990:five_prime_UTR | 40.0% | |
| AGGGACTTATCCTCTAATCT+GGG | - | chr8_2:25910042-25910061 | Msa1241990:five_prime_UTR | 40.0% | |
| ACTTATCCTCTAATCTGGGT+AGG | - | chr8_2:25910046-25910065 | Msa1241990:five_prime_UTR | 40.0% | |
| ! | TGTTTTCGCTCGCAACGTAT+AGG | - | chr8_2:25904885-25904904 | Msa1241990:intron | 45.0% |
| !! | AGTGTTGGTCTGTTGTACTG+TGG | - | chr8_2:25905543-25905562 | Msa1241990:intron | 45.0% |
| ! | AGCTACTATGCTGGCTATGT+AGG | - | chr8_2:25905739-25905758 | Msa1241990:intron | 45.0% |
| ! | CTATGCTGGCTATGTAGGTA+AGG | - | chr8_2:25905744-25905763 | Msa1241990:intron | 45.0% |
| GGAATGGTTTCTGATCGCTA+TGG | - | chr8_2:25905891-25905910 | Msa1241990:intron | 45.0% | |
| TGGTGCAATTGGACCAGTAA+AGG | - | chr8_2:25906159-25906178 | Msa1241990:intron | 45.0% | |
| ! | GGCTTTTGAATGTGTACACC+TGG | - | chr8_2:25906206-25906225 | Msa1241990:CDS | 45.0% |
| TGGTTTAGGTAAGTGCAGCT+TGG | - | chr8_2:25906577-25906596 | Msa1241990:CDS | 45.0% | |
| GGTTTAGGTAAGTGCAGCTT+GGG | - | chr8_2:25906578-25906597 | Msa1241990:CDS | 45.0% | |
| GTTTAGGTAAGTGCAGCTTG+GGG | - | chr8_2:25906579-25906598 | Msa1241990:CDS | 45.0% | |
| ! | ATTGGGAGGCTATTTAGCTC+AGG | - | chr8_2:25906626-25906645 | Msa1241990:intron | 45.0% |
| ATGAAGCAGGGCAAGAAGTA+AGG | + | chr8_2:25907195-25907214 | None:intergenic | 45.0% | |
| TATTGCCTGCTTGTGGATTC+CGG | - | chr8_2:25907242-25907261 | Msa1241990:intron | 45.0% | |
| CCCTTCATAGCAATGTTGTC+AGG | - | chr8_2:25907984-25908003 | Msa1241990:intron | 45.0% | |
| GCCTGACAACATTGCTATGA+AGG | + | chr8_2:25907988-25908007 | None:intergenic | 45.0% | |
| ACAGGAACAACACCAAAGAG+GGG | - | chr8_2:25908364-25908383 | Msa1241990:CDS | 45.0% | |
| TTTAACTGCAGGCACCCATA+TGG | - | chr8_2:25909027-25909046 | Msa1241990:intron | 45.0% | |
| GTTGAAAGGGAAGAGAATGC+TGG | - | chr8_2:25909396-25909415 | Msa1241990:intron | 45.0% | |
| AGTCCCTACAATTGTGCTTG+GGG | + | chr8_2:25910029-25910048 | None:intergenic | 45.0% | |
| !! | AAATATAATTAAAAGTAAAA+AGG | + | chr8_2:25905375-25905394 | None:intergenic | 5.0% |
| GCTTGGTCAACCTTACAACC+AGG | + | chr8_2:25904360-25904379 | None:intergenic | 50.0% | |
| GCATGTAGCGAGTCCAATCT+CGG | - | chr8_2:25904618-25904637 | Msa1241990:intron | 50.0% | |
| CGAGAAGAACACCAAGCTCT+AGG | - | chr8_2:25906330-25906349 | Msa1241990:intron | 50.0% | |
| CTGTTGAGAGTCCTAGAGCT+TGG | + | chr8_2:25906344-25906363 | None:intergenic | 50.0% | |
| ! | ATCATTGGACCAGCATTGGG+AGG | - | chr8_2:25906612-25906631 | Msa1241990:intron | 50.0% |
| GCTAAATAGCCTCCCAATGC+TGG | + | chr8_2:25906624-25906643 | None:intergenic | 50.0% | |
| ACATACCGGAATCCACAAGC+AGG | + | chr8_2:25907250-25907269 | None:intergenic | 50.0% | |
| CCACTGCTCGGTTCTGTATA+AGG | + | chr8_2:25908208-25908227 | None:intergenic | 50.0% | |
| CCTTATACAGAACCGAGCAG+TGG | - | chr8_2:25908205-25908224 | Msa1241990:intron | 50.0% | |
| TTCCATTAGCTGCCCCTCTT+TGG | + | chr8_2:25908379-25908398 | None:intergenic | 50.0% | |
| ATGGATGCTTCTTTCCTCCC+AGG | - | chr8_2:25908612-25908631 | Msa1241990:intron | 50.0% | |
| ! | AGTTGAGCATTGTACCTGGG+AGG | + | chr8_2:25908629-25908648 | None:intergenic | 50.0% |
| GCTCTGTGATCTTAAGGGAG+TGG | + | chr8_2:25908714-25908733 | None:intergenic | 50.0% | |
| GTAAGTGCAGCTTGGGGAAC+AGG | - | chr8_2:25906585-25906604 | Msa1241990:CDS | 55.0% | |
| CACCAAAGAGGGGCAGCTAA+TGG | - | chr8_2:25908374-25908393 | Msa1241990:CDS | 55.0% | |
| AAAGCCATTGGACCTGCTGC+TGG | - | chr8_2:25908425-25908444 | Msa1241990:intron | 55.0% | |
| CACATTGTACCACCAGCAGC+AGG | + | chr8_2:25908440-25908459 | None:intergenic | 55.0% | |
| ACCACCAGCAGCAGGTCCAA+TGG | + | chr8_2:25908432-25908451 | None:intergenic | 60.0% | |
| GCCATTGGACCTGCTGCTGG+TGG | - | chr8_2:25908428-25908447 | Msa1241990:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 25904139 | 25910106 | 25904139 | ID=Msa1241990;Name=Msa1241990 |
| chr8_2 | mRNA | 25904139 | 25910106 | 25904139 | ID=Msa1241990-mRNA-1;Parent=Msa1241990;Name=Msa1241990-mRNA-1;_AED=0.41;_eAED=0.41;_QI=158|1|1|1|0.88|0.84|19|490|488 |
| chr8_2 | exon | 25904139 | 25904305 | 25904139 | ID=Msa1241990-mRNA-1:exon:9183;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25904672 | 25904895 | 25904672 | ID=Msa1241990-mRNA-1:exon:9182;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25904996 | 25905207 | 25904996 | ID=Msa1241990-mRNA-1:exon:9181;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25905612 | 25905655 | 25905612 | ID=Msa1241990-mRNA-1:exon:9180;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25905789 | 25905877 | 25905789 | ID=Msa1241990-mRNA-1:exon:9179;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25906019 | 25906063 | 25906019 | ID=Msa1241990-mRNA-1:exon:9178;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25906184 | 25906291 | 25906184 | ID=Msa1241990-mRNA-1:exon:9177;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25906372 | 25906457 | 25906372 | ID=Msa1241990-mRNA-1:exon:9176;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25906542 | 25906629 | 25906542 | ID=Msa1241990-mRNA-1:exon:9175;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25906713 | 25906904 | 25906713 | ID=Msa1241990-mRNA-1:exon:9174;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25906982 | 25907057 | 25906982 | ID=Msa1241990-mRNA-1:exon:9173;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25907320 | 25907369 | 25907320 | ID=Msa1241990-mRNA-1:exon:9172;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25907598 | 25907660 | 25907598 | ID=Msa1241990-mRNA-1:exon:9171;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25907883 | 25907936 | 25907883 | ID=Msa1241990-mRNA-1:exon:9170;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25908065 | 25908167 | 25908065 | ID=Msa1241990-mRNA-1:exon:9169;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25908296 | 25908398 | 25908296 | ID=Msa1241990-mRNA-1:exon:9168;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25908485 | 25908545 | 25908485 | ID=Msa1241990-mRNA-1:exon:9167;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25908920 | 25908960 | 25908920 | ID=Msa1241990-mRNA-1:exon:9166;Parent=Msa1241990-mRNA-1 |
| chr8_2 | exon | 25909798 | 25910106 | 25909798 | ID=Msa1241990-mRNA-1:exon:9165;Parent=Msa1241990-mRNA-1 |
| chr8_2 | five_prime_UTR | 25909949 | 25910106 | 25909949 | ID=Msa1241990-mRNA-1:five_prime_utr;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25909798 | 25909948 | 25909798 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25908920 | 25908960 | 25908920 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25908485 | 25908545 | 25908485 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25908296 | 25908398 | 25908296 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25908065 | 25908167 | 25908065 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25907883 | 25907936 | 25907883 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25907598 | 25907660 | 25907598 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25907320 | 25907369 | 25907320 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25906982 | 25907057 | 25906982 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25906713 | 25906904 | 25906713 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25906542 | 25906629 | 25906542 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25906372 | 25906457 | 25906372 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25906184 | 25906291 | 25906184 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25906019 | 25906063 | 25906019 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25905789 | 25905877 | 25905789 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25905612 | 25905655 | 25905612 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | CDS | 25905095 | 25905207 | 25905095 | ID=Msa1241990-mRNA-1:cds;Parent=Msa1241990-mRNA-1 |
| chr8_2 | three_prime_UTR | 25904996 | 25905094 | 25904996 | ID=Msa1241990-mRNA-1:three_prime_utr;Parent=Msa1241990-mRNA-1 |
| chr8_2 | three_prime_UTR | 25904672 | 25904895 | 25904672 | ID=Msa1241990-mRNA-1:three_prime_utr;Parent=Msa1241990-mRNA-1 |
| chr8_2 | three_prime_UTR | 25904139 | 25904305 | 25904139 | ID=Msa1241990-mRNA-1:three_prime_utr;Parent=Msa1241990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
