Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138220 | KEH44375.1 | 64.610 | 308 | 67 | 6 | 1 | 268 | 482 | 787 | 3.86e-102 | 338 |
| Msa0138220 | KEH44375.1 | 68.511 | 705 | 130 | 11 | 9 | 628 | 100 | 797 | 0.0 | 882 |
| Msa0138220 | KEH44375.1 | 71.320 | 394 | 72 | 4 | 272 | 625 | 9 | 401 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138220 | sp|Q9FLC2|MO3_ARATH | 47.990 | 398 | 163 | 5 | 273 | 627 | 7 | 403 | 3.78e-122 | 370 |
| Msa0138220 | sp|Q9FLC2|MO3_ARATH | 44.816 | 299 | 119 | 7 | 12 | 268 | 100 | 394 | 2.43e-73 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138220 | A0A072W2C4 | 64.610 | 308 | 67 | 6 | 1 | 268 | 482 | 787 | 1.84e-102 | 338 |
| Msa0138220 | A0A072W2C4 | 68.511 | 705 | 130 | 11 | 9 | 628 | 100 | 797 | 0.0 | 882 |
| Msa0138220 | A0A072W2C4 | 71.320 | 394 | 72 | 4 | 272 | 625 | 9 | 401 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010760 | Msa0138220 | 0.960604 | 9.570591e-119 | -8.615850e-47 |
| Msa0090910 | Msa0138220 | 0.886940 | 2.207341e-72 | -8.615850e-47 |
| Msa0138220 | Msa0183410 | 0.977167 | 3.049928e-143 | -8.615850e-47 |
| Msa0138220 | Msa0307470 | 0.815307 | 9.886720e-52 | -8.615850e-47 |
| Msa0138220 | Msa0388840 | 0.814413 | 1.560460e-51 | -8.615850e-47 |
| Msa0138220 | Msa0433530 | 0.806316 | 8.727016e-50 | -8.615850e-47 |
| Msa0138220 | Msa0531550 | 0.803248 | 3.816938e-49 | -8.615850e-47 |
| Msa0138220 | Msa0588240 | 0.821317 | 4.304678e-53 | -8.615850e-47 |
| Msa0138220 | Msa0594910 | 0.800876 | 1.173063e-48 | -8.615850e-47 |
| Msa0138220 | Msa0673470 | 0.804848 | 1.774019e-49 | -8.615850e-47 |
| Msa0138220 | Msa0704730 | 0.812398 | 4.325610e-51 | -8.615850e-47 |
| Msa0138220 | Msa1041540 | 0.813437 | 2.561287e-51 | -8.615850e-47 |
| Msa0138220 | Msa1166390 | 0.826896 | 2.109760e-54 | -8.615850e-47 |
| Msa0138220 | Msa1187780 | 0.848242 | 6.944096e-60 | -8.615850e-47 |
| Msa0138220 | Msa1211000 | 0.802745 | 4.848628e-49 | -8.615850e-47 |
| Msa0138220 | Msa1241990 | 0.848218 | 7.051223e-60 | -8.615850e-47 |
| Msa0138220 | Msa1283150 | 0.810337 | 1.211709e-50 | -8.615850e-47 |
| Msa0138220 | Msa1322400 | 0.800404 | 1.464484e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138220 | MtrunA17_Chr1g0211141 | 84.673 | 398 | 21 | 3 | 271 | 628 | 1 | 398 | 0.0 | 629 |
| Msa0138220 | MtrunA17_Chr1g0211141 | 64.918 | 305 | 62 | 6 | 2 | 268 | 91 | 388 | 1.23e-110 | 338 |
| Msa0138220 | MtrunA17_Chr1g0197161 | 75.186 | 403 | 56 | 4 | 270 | 628 | 4 | 406 | 0.0 | 581 |
| Msa0138220 | MtrunA17_Chr1g0197161 | 62.951 | 305 | 72 | 5 | 2 | 268 | 95 | 396 | 4.84e-115 | 349 |
| Msa0138220 | MtrunA17_Chr1g0211171 | 76.039 | 409 | 51 | 5 | 267 | 628 | 1 | 409 | 0.0 | 576 |
| Msa0138220 | MtrunA17_Chr1g0211171 | 64.610 | 308 | 67 | 6 | 1 | 268 | 94 | 399 | 6.67e-111 | 339 |
| Msa0138220 | MtrunA17_Chr1g0211181 | 71.212 | 396 | 73 | 4 | 272 | 627 | 9 | 403 | 0.0 | 548 |
| Msa0138220 | MtrunA17_Chr1g0211181 | 60.544 | 294 | 75 | 5 | 9 | 264 | 100 | 390 | 1.16e-107 | 330 |
| Msa0138220 | MtrunA17_Chr1g0211151 | 69.704 | 406 | 79 | 5 | 267 | 628 | 1 | 406 | 1.26e-175 | 504 |
| Msa0138220 | MtrunA17_Chr1g0211151 | 77.524 | 307 | 26 | 6 | 1 | 268 | 94 | 396 | 4.96e-139 | 411 |
| Msa0138220 | MtrunA17_Chr5g0399671 | 36.053 | 380 | 197 | 7 | 269 | 608 | 40 | 413 | 3.11e-69 | 231 |
| Msa0138220 | MtrunA17_Chr5g0399671 | 29.078 | 282 | 166 | 8 | 9 | 258 | 134 | 413 | 2.11e-24 | 106 |
| Msa0138220 | MtrunA17_Chr5g0399661 | 34.080 | 402 | 216 | 8 | 269 | 628 | 36 | 430 | 4.45e-63 | 214 |
| Msa0138220 | MtrunA17_Chr5g0399661 | 29.658 | 263 | 148 | 7 | 12 | 241 | 133 | 391 | 4.90e-24 | 105 |
| Msa0138220 | MtrunA17_Chr4g0018001 | 30.952 | 210 | 134 | 3 | 54 | 252 | 4 | 213 | 1.06e-30 | 120 |
| Msa0138220 | MtrunA17_Chr4g0018001 | 32.353 | 170 | 95 | 3 | 453 | 602 | 44 | 213 | 8.36e-23 | 98.2 |
| Msa0138220 | MtrunA17_Chr4g0017981 | 35.211 | 142 | 85 | 1 | 483 | 624 | 14 | 148 | 8.28e-23 | 95.5 |
| Msa0138220 | MtrunA17_Chr4g0017981 | 30.769 | 143 | 89 | 2 | 130 | 262 | 1 | 143 | 2.00e-17 | 80.1 |
| Msa0138220 | MtrunA17_Chr4g0017991 | 32.258 | 155 | 64 | 4 | 267 | 401 | 1 | 134 | 5.59e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138220 | AT5G05320.1 | 47.990 | 398 | 163 | 5 | 273 | 627 | 7 | 403 | 3.84e-123 | 370 |
| Msa0138220 | AT5G05320.1 | 44.816 | 299 | 119 | 7 | 12 | 268 | 100 | 394 | 2.47e-74 | 244 |
| Msa0138220 | AT4G38540.1 | 50.000 | 406 | 153 | 6 | 271 | 627 | 1 | 405 | 2.63e-117 | 355 |
| Msa0138220 | AT4G38540.1 | 42.667 | 300 | 126 | 5 | 12 | 268 | 100 | 396 | 1.25e-62 | 213 |
| Msa0138220 | AT2G35660.1 | 35.176 | 398 | 209 | 8 | 272 | 627 | 44 | 434 | 7.91e-63 | 214 |
| Msa0138220 | AT2G35660.1 | 29.771 | 262 | 151 | 6 | 12 | 242 | 138 | 397 | 7.72e-23 | 102 |
| Msa0138220 | AT2G29720.1 | 36.544 | 353 | 193 | 7 | 282 | 611 | 70 | 414 | 3.81e-61 | 209 |
| Msa0138220 | AT2G29720.1 | 27.402 | 281 | 171 | 6 | 12 | 261 | 136 | 414 | 1.48e-22 | 101 |
| Msa0138220 | AT4G15760.1 | 31.536 | 371 | 225 | 6 | 282 | 627 | 56 | 422 | 1.40e-53 | 189 |
| Msa0138220 | AT4G15760.1 | 25.088 | 283 | 168 | 6 | 12 | 253 | 119 | 398 | 1.20e-25 | 110 |
| Msa0138220 | AT4G15760.2 | 31.070 | 383 | 223 | 7 | 282 | 627 | 56 | 434 | 1.12e-52 | 187 |
| Msa0138220 | AT4G15760.2 | 25.088 | 283 | 168 | 6 | 12 | 253 | 131 | 410 | 1.55e-25 | 110 |
| Msa0138220 | AT2G35660.2 | 35.423 | 319 | 176 | 6 | 333 | 627 | 8 | 320 | 1.29e-49 | 176 |
| Msa0138220 | AT2G35660.2 | 29.771 | 262 | 151 | 6 | 12 | 242 | 24 | 283 | 2.58e-23 | 101 |
| Msa0138220 | AT2G35660.3 | 35.423 | 319 | 176 | 6 | 333 | 627 | 8 | 320 | 1.29e-49 | 176 |
| Msa0138220 | AT2G35660.3 | 29.771 | 262 | 151 | 6 | 12 | 242 | 24 | 283 | 2.58e-23 | 101 |
| Msa0138220 | AT4G15765.1 | 28.082 | 292 | 148 | 10 | 271 | 529 | 1 | 263 | 3.28e-18 | 85.5 |
| Msa0138220 | AT4G15765.2 | 27.174 | 184 | 111 | 3 | 368 | 529 | 8 | 190 | 6.86e-16 | 77.0 |
| Msa0138220 | AT4G15765.5 | 27.174 | 184 | 111 | 3 | 368 | 529 | 8 | 190 | 6.86e-16 | 77.0 |
| Msa0138220 | AT4G15765.3 | 27.174 | 184 | 111 | 3 | 368 | 529 | 8 | 190 | 6.86e-16 | 77.0 |
| Msa0138220 | AT4G15765.4 | 27.174 | 184 | 111 | 3 | 368 | 529 | 8 | 190 | 6.86e-16 | 77.0 |
Find 151 sgRNAs with CRISPR-Local
Find 714 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTTCCTTTGGTTTCT+TGG | 0.080457 | 1_3:+70995396 | None:intergenic |
| TACTTCTTCCTTTGGTTTCT+TGG | 0.093015 | 1_3:+71005951 | None:intergenic |
| CAAAATTTGTTAACTTCTTT+AGG | 0.144756 | 1_3:-70995261 | Msa0138220:CDS |
| ATCAAAGGTGGTTGCTATTC+AGG | 0.168277 | 1_3:-71007679 | Msa0138220:CDS |
| GTCAAAGGTTGTTGCTATTC+AGG | 0.183324 | 1_3:-70996236 | Msa0138220:CDS |
| GTGGGTTCTATTAATGAAAA+TGG | 0.197349 | 1_3:-71005835 | Msa0138220:CDS |
| CTTCTTTAGGGATAAAATTC+TGG | 0.205709 | 1_3:-70995248 | Msa0138220:CDS |
| GCGGATTTGCTTTAACAATA+TGG | 0.223001 | 1_3:-71004586 | Msa0138220:CDS |
| AATATGCAAGTGAGAGAAAA+TGG | 0.232349 | 1_3:-70995342 | Msa0138220:CDS |
| GGTATTTCACCTTGGCTAAT+AGG | 0.258501 | 1_3:+70995941 | None:intergenic |
| AAAATTTGTTAACTTCTTTA+GGG | 0.269584 | 1_3:-70995260 | Msa0138220:CDS |
| AAAGACAATGTTTGTATTGC+TGG | 0.273414 | 1_3:-71006072 | Msa0138220:CDS |
| AAGTAGAAGAAGAATATAAA+AGG | 0.299192 | 1_3:-71005933 | Msa0138220:CDS |
| AAAGGAAATGTTTGTGTTGT+TGG | 0.311040 | 1_3:-70995517 | Msa0138220:CDS |
| CGGATTTGCTTTAACAATAT+GGG | 0.317160 | 1_3:-71004585 | Msa0138220:CDS |
| TTCCTTTGGTTTCTTGGAAA+AGG | 0.321296 | 1_3:+70995402 | None:intergenic |
| TTGTATTCTTCTTCTTCCTT+TGG | 0.323398 | 1_3:+70995388 | None:intergenic |
| AATATCAACTACGTCTTTCA+TGG | 0.328496 | 1_3:-71007940 | Msa0138220:exon |
| TCTTCTTCTACTTCTTCCTT+TGG | 0.329520 | 1_3:+71005943 | None:intergenic |
| ACATCCTTGGGAGCTTATAA+TGG | 0.330779 | 1_3:-71006106 | Msa0138220:CDS |
| GTGATGACAAGTGTGCTTAT+TGG | 0.331848 | 1_3:-71006534 | Msa0138220:CDS |
| GTTGTTGCTATTCAGGAATC+TGG | 0.332949 | 1_3:-70996229 | Msa0138220:CDS |
| AAAATATTACATCTTGTTGA+TGG | 0.342630 | 1_3:-70996199 | Msa0138220:CDS |
| TGCATATCTCCCTGTGTTAG+AGG | 0.344088 | 1_3:+70996096 | None:intergenic |
| GTAACTACTTCTTTGATAAC+GGG | 0.344316 | 1_3:-71007969 | Msa0138220:five_prime_UTR |
| GTGAAGTTCGTTGTGTTAGA+AGG | 0.345398 | 1_3:-70996315 | Msa0138220:CDS |
| GTGGTTGCTATTCAGGAATC+TGG | 0.356822 | 1_3:-71007672 | Msa0138220:CDS |
| TTCAAAGAGGCCTCTAACAC+AGG | 0.364705 | 1_3:-70996106 | Msa0138220:CDS |
| ATTGTGGGAGCTGGAATTGC+TGG | 0.365284 | 1_3:-71004987 | Msa0138220:intron |
| AGCTTCCAAGTGGCACTATT+AGG | 0.367504 | 1_3:-71007707 | Msa0138220:CDS |
| GTGATGAGAGGAGTGTTTAT+TGG | 0.370317 | 1_3:-70995979 | Msa0138220:CDS |
| TTGTATTCACCTTGCTTGCT+AGG | 0.372898 | 1_3:+71006493 | None:intergenic |
| GGGTGTTGTGCTTTAGAGGA+TGG | 0.372973 | 1_3:-70995454 | Msa0138220:CDS |
| GTGACGACTACTTTGATTAC+GGG | 0.384896 | 1_3:-70996495 | Msa0138220:CDS |
| GGTGTTGTGCTTTAGAGGAT+GGG | 0.387261 | 1_3:-70995453 | Msa0138220:CDS |
| ATCAAAACCAAGGTGTTGAT+TGG | 0.389792 | 1_3:-70996169 | Msa0138220:CDS |
| TGACCAAGATCAGGTGTCAT+AGG | 0.390228 | 1_3:+70995481 | None:intergenic |
| CACCCTATGACACCTGATCT+TGG | 0.391704 | 1_3:-70995484 | Msa0138220:CDS |
| CATCAACATATGCAGCTTCA+TGG | 0.392251 | 1_3:-71004512 | Msa0138220:CDS |
| TGTGACGACTACTTTGATTA+CGG | 0.393200 | 1_3:-70996496 | Msa0138220:CDS |
| GCCTTGGATGTTGTTGGTGT+TGG | 0.395609 | 1_3:-71004548 | Msa0138220:CDS |
| ATTACTGCATCTTATATTGT+GGG | 0.404848 | 1_3:-70995304 | Msa0138220:CDS |
| TGTAACTACTTCTTTGATAA+CGG | 0.411585 | 1_3:-71007970 | Msa0138220:five_prime_UTR |
| AATATGCAAAGGAGAGAAGA+TGG | 0.415258 | 1_3:-71005891 | Msa0138220:CDS |
| TGGAAGGCCTTGGATGTTGT+TGG | 0.417071 | 1_3:-71004554 | Msa0138220:CDS |
| GTGTTGTGCTTTAGAGGATG+GGG | 0.426399 | 1_3:-70995452 | Msa0138220:CDS |
| CATTACTGCATCTTATATTG+TGG | 0.430022 | 1_3:-70995305 | Msa0138220:CDS |
| TTTCCTTTGTTATTCTTGAA+AGG | 0.430760 | 1_3:+70996453 | None:intergenic |
| AAGTTTAGTATTAGAATCTT+CGG | 0.432163 | 1_3:-71004624 | Msa0138220:intron |
| CATGAAGCTGCATATGTTGA+TGG | 0.434234 | 1_3:+71004513 | None:intergenic |
| TGGAGATGCTTTGCACCCTA+TGG | 0.434991 | 1_3:-71006052 | Msa0138220:CDS |
| CATCCTTGGGAGCTTATAAT+GGG | 0.442711 | 1_3:-71006105 | Msa0138220:CDS |
| TGTTAGAAGAAAGTTATTGT+TGG | 0.451552 | 1_3:-71007745 | Msa0138220:CDS |
| CCAATGTTCATGCAGTACTT+TGG | 0.458036 | 1_3:-70996031 | Msa0138220:CDS |
| TAACAATATGGGAAAATGCT+TGG | 0.460242 | 1_3:-71004574 | Msa0138220:CDS |
| TGTTAGAAGGAAGTTATTGT+TGG | 0.460274 | 1_3:-70996302 | Msa0138220:CDS |
| GGAAGAAGATATTGTGATTG+TGG | 0.461082 | 1_3:-71005003 | Msa0138220:CDS |
| GGAAAATGCTTGGAAGGCCT+TGG | 0.464232 | 1_3:-71004564 | Msa0138220:CDS |
| AACCTTTGACATGTACCTAA+TGG | 0.465605 | 1_3:+70996249 | None:intergenic |
| CGTGTAGAGTTATGTAACTA+GGG | 0.468190 | 1_3:-71006644 | Msa0138220:intron |
| ATTACTACAAGTTATATTGT+GGG | 0.471264 | 1_3:-71005853 | Msa0138220:CDS |
| CATTGAGATATAGACATCCT+TGG | 0.475442 | 1_3:-70995564 | Msa0138220:CDS |
| CATTGAGATATAGACATCCT+TGG | 0.475442 | 1_3:-71006119 | Msa0138220:CDS |
| AATTACTACAAGTTATATTG+TGG | 0.477914 | 1_3:-71005854 | Msa0138220:CDS |
| AGCTTCCTAGTGGCACCATT+AGG | 0.478225 | 1_3:-70996264 | Msa0138220:CDS |
| TAGGGGTTATGCTGAGTTGA+AGG | 0.478447 | 1_3:-71006626 | Msa0138220:CDS |
| ATGATAGATCTAACATAACT+TGG | 0.482878 | 1_3:+71006177 | None:intergenic |
| GAATATAAAAGGATTGAAGA+AGG | 0.486159 | 1_3:-71005922 | Msa0138220:CDS |
| CTGAGTACATCATGAACATT+GGG | 0.488157 | 1_3:+71006587 | None:intergenic |
| ACATCCTTGGGAGCTTATGA+TGG | 0.490825 | 1_3:-70995551 | Msa0138220:CDS |
| TCTGTGGTGGCAAAGTGGTT+AGG | 0.491813 | 1_3:-70996130 | Msa0138220:CDS |
| AATAGTTATGGAAAGTGTGA+TGG | 0.497464 | 1_3:-71005024 | Msa0138220:intron |
| ATTGAGATATAGACATCCTT+GGG | 0.500029 | 1_3:-70995563 | Msa0138220:CDS |
| ATTGAGATATAGACATCCTT+GGG | 0.500029 | 1_3:-71006118 | Msa0138220:CDS |
| AGTGCCACTTGGAAGCTCAT+TGG | 0.500633 | 1_3:+71007713 | None:intergenic |
| TCAAAACCAAGGTGTTGATT+GGG | 0.505761 | 1_3:-70996168 | Msa0138220:CDS |
| AGGAAGAAGAAGAATACAAA+AGG | 0.505964 | 1_3:-70995384 | Msa0138220:CDS |
| GAAGAAGATATTGTGATTGT+GGG | 0.506229 | 1_3:-71005002 | Msa0138220:CDS |
| TGGTTTCTTGGAAAAGGCCT+CGG | 0.506552 | 1_3:+70995408 | None:intergenic |
| ACGTGTAGAGTTATGTAACT+AGG | 0.506579 | 1_3:-71006645 | Msa0138220:intron |
| TTGTGCTTTAGAGGATGGGG+TGG | 0.506803 | 1_3:-70995449 | Msa0138220:CDS |
| AGAAGAATACAAAAGGATTG+AGG | 0.512161 | 1_3:-70995377 | Msa0138220:CDS |
| CCTGAGTACATCATGAACAT+TGG | 0.513145 | 1_3:+71006586 | None:intergenic |
| TGTGCAAGATAAGGTGCCAT+AGG | 0.515310 | 1_3:+71006036 | None:intergenic |
| CAAGGATGTCTATATCTCAA+TGG | 0.515761 | 1_3:+70995565 | None:intergenic |
| CAAGGATGTCTATATCTCAA+TGG | 0.515761 | 1_3:+71006120 | None:intergenic |
| GATATTGTGATTGTGGGAGC+TGG | 0.518765 | 1_3:-71004996 | Msa0138220:CDS |
| CCAAAGTACTGCATGAACAT+TGG | 0.523201 | 1_3:+70996031 | None:intergenic |
| TCTAACACAACGAACTTCAC+AGG | 0.530671 | 1_3:+71007761 | None:intergenic |
| ATGATGGGAAATATTAGTAA+AGG | 0.531699 | 1_3:-70995535 | Msa0138220:CDS |
| TTCATGCAGTACTTTGGCAA+AGG | 0.540273 | 1_3:-70996025 | Msa0138220:CDS |
| TCGGATAGTTTGCGAGTAAG+CGG | 0.542146 | 1_3:-71004605 | Msa0138220:CDS |
| GACCAAGATCAGGTGTCATA+GGG | 0.545249 | 1_3:+70995482 | None:intergenic |
| ATCAACATATGCAGCTTCAT+GGG | 0.545456 | 1_3:-71004511 | Msa0138220:intron |
| AATATGGGAAAATGCTTGGA+AGG | 0.553301 | 1_3:-71004570 | Msa0138220:CDS |
| TCAAAATATGACTTCTTCAA+CGG | 0.553804 | 1_3:+71005754 | None:intergenic |
| TTTGTTATTCTTGAAAGGTG+TGG | 0.554455 | 1_3:+70996458 | None:intergenic |
| GGGCTCTTCCATGTGATGAG+AGG | 0.554636 | 1_3:-70995991 | Msa0138220:CDS |
| GTGGGTTATATTCAACAAAG+TGG | 0.555643 | 1_3:-70995286 | Msa0138220:CDS |
| GGTGCCACTAGGAAGCTCAT+TGG | 0.561305 | 1_3:+70996270 | None:intergenic |
| TTCATGATGTACTCAGGCAA+AGG | 0.569290 | 1_3:-71006580 | Msa0138220:CDS |
| ATGACACCTGATCTTGGTCA+AGG | 0.570907 | 1_3:-70995478 | Msa0138220:CDS |
| CACCATTAGGTACATGTCAA+AGG | 0.572299 | 1_3:-70996251 | Msa0138220:CDS |
| AAGATACTACATCTTGCTGA+TGG | 0.573985 | 1_3:-71007642 | Msa0138220:CDS |
| TTTCCCATTATAAGCTCCCA+AGG | 0.574602 | 1_3:+71006102 | None:intergenic |
| TTTAGCAAGGTGCTTAGCCG+AGG | 0.575073 | 1_3:-70995425 | Msa0138220:CDS |
| ATCACACCCAATCAACACCT+TGG | 0.578417 | 1_3:+70996162 | None:intergenic |
| GTGCAAGATAAGGTGCCATA+GGG | 0.579846 | 1_3:+71006037 | None:intergenic |
| TGACACCTGATCTTGGTCAA+GGG | 0.585117 | 1_3:-70995477 | Msa0138220:CDS |
| TTTAGCAAGGTGCCTAGGTG+AGG | 0.589091 | 1_3:-71005980 | Msa0138220:intron |
| CACTATTAGGTACTTATCAA+AGG | 0.589383 | 1_3:-71007694 | Msa0138220:CDS |
| TCTTCAACAGTTGAACAGCT+AGG | 0.593198 | 1_3:+70995218 | None:intergenic |
| CATCCTTGGGAGCTTATGAT+GGG | 0.594050 | 1_3:-70995550 | Msa0138220:CDS |
| AAGGTGTTGATTGGGTGTGA+TGG | 0.594090 | 1_3:-70996160 | Msa0138220:CDS |
| CCAATGTTCATGATGTACTC+AGG | 0.595564 | 1_3:-71006586 | Msa0138220:CDS |
| TTTCCCATCATAAGCTCCCA+AGG | 0.596739 | 1_3:+70995547 | None:intergenic |
| GGCACCTTATCTTGCACAAG+GGG | 0.597077 | 1_3:-71006031 | Msa0138220:CDS |
| GACACCTGATCTTGGTCAAG+GGG | 0.601603 | 1_3:-70995476 | Msa0138220:CDS |
| ACATGGACTCCTATTAGCCA+AGG | 0.609077 | 1_3:-70995950 | Msa0138220:intron |
| TAAACACTCCTCTCATCACA+TGG | 0.612843 | 1_3:+70995983 | None:intergenic |
| AGGTTTGAAGAAATATGCAA+AGG | 0.618242 | 1_3:-71005902 | Msa0138220:CDS |
| TCTTGGAAAATGCCTCACCT+AGG | 0.621368 | 1_3:+71005968 | None:intergenic |
| TCCAACACCAACAACATCCA+AGG | 0.623961 | 1_3:+71004547 | None:intergenic |
| CACCTTATCTTGCACAAGGG+GGG | 0.626753 | 1_3:-71006029 | Msa0138220:intron |
| ACACCTTTCAAGAATAACAA+AGG | 0.628535 | 1_3:-70996456 | Msa0138220:CDS |
| ATGGCACCTTATCTTGCACA+AGG | 0.629772 | 1_3:-71006033 | Msa0138220:CDS |
| TCAAAGAGGCCTCTAACACA+GGG | 0.635552 | 1_3:-70996105 | Msa0138220:CDS |
| ATGTACCTAATGGTGCCACT+AGG | 0.636331 | 1_3:+70996259 | None:intergenic |
| GCTGCATATGTTGATGGCGA+AGG | 0.640513 | 1_3:+71004519 | None:intergenic |
| TAAACTCTGTGGTGGCAAAG+TGG | 0.641769 | 1_3:-70996135 | Msa0138220:CDS |
| TATTAGGTACTTATCAAAGG+TGG | 0.643674 | 1_3:-71007691 | Msa0138220:CDS |
| CATTGGTTCAAGCTTGTGAG+TGG | 0.645311 | 1_3:+70996048 | None:intergenic |
| CACCTGATCTTGGTCAAGGG+GGG | 0.646163 | 1_3:-70995474 | Msa0138220:CDS |
| ACGTCTTTCATGGACAACAA+AGG | 0.652008 | 1_3:-71007930 | Msa0138220:exon |
| TAACTACTTCTTTGATAACG+GGG | 0.658751 | 1_3:-71007968 | Msa0138220:five_prime_UTR |
| TAAGCACACTTGTCATCACA+TGG | 0.662663 | 1_3:+71006538 | None:intergenic |
| TGTACTACTCCTAGCAAGCA+AGG | 0.664270 | 1_3:-71006502 | Msa0138220:intron |
| CTTACCAATGAGCTTCCAAG+TGG | 0.664772 | 1_3:-71007717 | Msa0138220:CDS |
| CTTGCCAATGAGCTTCCTAG+TGG | 0.666218 | 1_3:-70996274 | Msa0138220:CDS |
| AAGTACCTAATAGTGCCACT+TGG | 0.667803 | 1_3:+71007702 | None:intergenic |
| ACACCTGATCTTGGTCAAGG+GGG | 0.668650 | 1_3:-70995475 | Msa0138220:CDS |
| GCACCTTATCTTGCACAAGG+GGG | 0.672737 | 1_3:-71006030 | Msa0138220:CDS |
| GTGTAGAGTTATGTAACTAG+GGG | 0.672803 | 1_3:-71006643 | Msa0138220:intron |
| TGACGACTACTTTGATTACG+GGG | 0.673218 | 1_3:-70996494 | Msa0138220:CDS |
| TGGCACCTTATCTTGCACAA+GGG | 0.689213 | 1_3:-71006032 | Msa0138220:CDS |
| TGATGGAGTAAACTCTGTGG+TGG | 0.689773 | 1_3:-70996143 | Msa0138220:CDS |
| TGGAACAACAATCAAAACCA+AGG | 0.693752 | 1_3:-71007622 | Msa0138220:intron |
| TGGAACAACCATCAAAACCA+AGG | 0.703968 | 1_3:-70996179 | Msa0138220:CDS |
| AAAGTGGTTAGGCTTCAAAG+AGG | 0.718391 | 1_3:-70996119 | Msa0138220:CDS |
| ACAGGGAGATATGCAACCAG+AGG | 0.723621 | 1_3:-70996088 | Msa0138220:intron |
| GTGTGATGGAGTAAACTCTG+TGG | 0.740999 | 1_3:-70996146 | Msa0138220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATATATAAATAAA+AGG | - | chr1_3:71002145-71002164 | Msa0138220:intron | 0.0% |
| !!! | ATTTTAGTTTTTATTATAAG+TGG | - | chr1_3:70995883-70995902 | Msa0138220:intron | 10.0% |
| !!! | AAAAAATAATATTTTGTTGA+TGG | + | chr1_3:70995950-70995969 | None:intergenic | 10.0% |
| !!! | GTACATTTAATAATTTTTAA+TGG | + | chr1_3:70996248-70996267 | None:intergenic | 10.0% |
| !!! | GAATTTTTTTAAAACTTTTT+AGG | + | chr1_3:70996727-70996746 | None:intergenic | 10.0% |
| !!! | TAGTATAATTTTTAAATCAT+TGG | - | chr1_3:70996848-70996867 | Msa0138220:intron | 10.0% |
| !!! | AAAATTTGTTAACTTTTTTA+AGG | - | chr1_3:70997353-70997372 | Msa0138220:intron | 10.0% |
| !!! | AAATTTGTTAACTTTTTTAA+GGG | - | chr1_3:70997354-70997373 | Msa0138220:intron | 10.0% |
| !! | ATTAAAAAAAAGAATAAATG+TGG | - | chr1_3:70997800-70997819 | Msa0138220:intron | 10.0% |
| !!! | TAAATTAATATATGGTTTTT+TGG | + | chr1_3:70998118-70998137 | None:intergenic | 10.0% |
| !!! | TAAAATAGTATATTCTTTTT+TGG | - | chr1_3:70998272-70998291 | Msa0138220:intron | 10.0% |
| !!! | AAAATAGTATATTCTTTTTT+GGG | - | chr1_3:70998273-70998292 | Msa0138220:intron | 10.0% |
| !!! | ACAGTTTTATTATTTAAATA+TGG | - | chr1_3:70998716-70998735 | Msa0138220:intron | 10.0% |
| !! | ATATATATATATTGAATACA+TGG | + | chr1_3:71000687-71000706 | None:intergenic | 10.0% |
| !! | CTTCATATTTATAAATTATA+GGG | + | chr1_3:71001376-71001395 | None:intergenic | 10.0% |
| !! | ACTTCATATTTATAAATTAT+AGG | + | chr1_3:71001377-71001396 | None:intergenic | 10.0% |
| !! | AAAAATATATAAATAAAAGG+AGG | - | chr1_3:71002148-71002167 | Msa0138220:intron | 10.0% |
| !! | AAAATATATAAATAAAAGGA+GGG | - | chr1_3:71002149-71002168 | Msa0138220:intron | 10.0% |
| !!! | AATTATCTTAAGTTTTTTTT+AGG | + | chr1_3:71004654-71004673 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTAATAGTTTT+TGG | - | chr1_3:71005599-71005618 | Msa0138220:intron | 10.0% |
| !!! | AACTATAATTTTTTTTTTGT+AGG | - | chr1_3:71005887-71005906 | Msa0138220:CDS | 10.0% |
| !!! | ACTATAATTTTTTTTTTGTA+GGG | - | chr1_3:71005888-71005907 | Msa0138220:CDS | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | + | chr1_3:71005947-71005966 | None:intergenic | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | + | chr1_3:71005947-71005966 | None:intergenic | 10.0% |
| !! | AAGAAAAAATAAATACAATT+TGG | - | chr1_3:71006542-71006561 | Msa0138220:CDS | 10.0% |
| !! | AGAAAAAATAAATACAATTT+GGG | - | chr1_3:71006543-71006562 | Msa0138220:CDS | 10.0% |
| !!! | ATTCTAAAAAATTTACTAAT+CGG | + | chr1_3:71007399-71007418 | None:intergenic | 10.0% |
| !!! | TAGTAAATTTTTTAGAATAT+TGG | - | chr1_3:71007401-71007420 | Msa0138220:intron | 10.0% |
| !!! | AATATTTTGTTTTTTTGAAG+AGG | + | chr1_3:70996101-70996120 | None:intergenic | 15.0% |
| !! | AGAAGTTTATATATATAGTT+GGG | + | chr1_3:70997978-70997997 | None:intergenic | 15.0% |
| !! | AAGAAGTTTATATATATAGT+TGG | + | chr1_3:70997979-70997998 | None:intergenic | 15.0% |
| !!! | TATCTTTTAAGCTTTTTTTT+AGG | + | chr1_3:70998067-70998086 | None:intergenic | 15.0% |
| !!! | GTAAATTGTTTCTTATAAAT+AGG | + | chr1_3:70998325-70998344 | None:intergenic | 15.0% |
| !!! | GTCATTTTTTTCTAATAAAT+AGG | - | chr1_3:70998423-70998442 | Msa0138220:intron | 15.0% |
| !!! | ATTAATTTTATTTAGAGAGA+GGG | + | chr1_3:70998776-70998795 | None:intergenic | 15.0% |
| !!! | TATTAATTTTATTTAGAGAG+AGG | + | chr1_3:70998777-70998796 | None:intergenic | 15.0% |
| !!! | ATTGTTAACTTTTAGATTTT+TGG | - | chr1_3:70998825-70998844 | Msa0138220:intron | 15.0% |
| !!! | ACACTAAAATGATATAATTT+TGG | - | chr1_3:70998923-70998942 | Msa0138220:intron | 15.0% |
| !! | ACAAAAATTAATTTACTTGA+TGG | + | chr1_3:70999042-70999061 | None:intergenic | 15.0% |
| !! | AATATTTGTGTCTTATAAAT+AGG | + | chr1_3:70999170-70999189 | None:intergenic | 15.0% |
| !!! | ATTTATGAAATTTTTACGTT+GGG | + | chr1_3:70999315-70999334 | None:intergenic | 15.0% |
| !!! | TATTTATGAAATTTTTACGT+TGG | + | chr1_3:70999316-70999335 | None:intergenic | 15.0% |
| !! | TCAACAATAAAAATAATCTT+TGG | - | chr1_3:70999462-70999481 | Msa0138220:intron | 15.0% |
| !!! | TGAATTTATTTGATTAGTTT+TGG | + | chr1_3:71000472-71000491 | None:intergenic | 15.0% |
| !! | ATACTCATTATAATTCAAAA+GGG | + | chr1_3:71000522-71000541 | None:intergenic | 15.0% |
| !! | AAATGTACCATATATAATTT+AGG | - | chr1_3:71000815-71000834 | Msa0138220:intron | 15.0% |
| !! | AATGTACCATATATAATTTA+GGG | - | chr1_3:71000816-71000835 | Msa0138220:intron | 15.0% |
| !! | AATTAACCCTAAATTATATA+TGG | + | chr1_3:71000825-71000844 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr1_3:71001302-71001321 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr1_3:71001301-71001320 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr1_3:71001082-71001101 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr1_3:71001213-71001232 | Msa0138220:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr1_3:71001301-71001320 | Msa0138220:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr1_3:71001302-71001321 | Msa0138220:intron | 15.0% |
| !!! | AAAAACTTGTTCATTAATTA+TGG | - | chr1_3:71001508-71001527 | Msa0138220:intron | 15.0% |
| !! | AGTGATAAGTATTATAAATA+AGG | + | chr1_3:71001960-71001979 | None:intergenic | 15.0% |
| !! | GTGATTTATTTATATATATG+AGG | + | chr1_3:71002109-71002128 | None:intergenic | 15.0% |
| !!! | CGTTAATTATATATATTTTG+TGG | + | chr1_3:71002782-71002801 | None:intergenic | 15.0% |
| !! | ATATGTCTCTTAAAAATAAA+TGG | - | chr1_3:71003266-71003285 | Msa0138220:intron | 15.0% |
| !! | TGAAATTAATTAGATATGTA+TGG | + | chr1_3:71003379-71003398 | None:intergenic | 15.0% |
| !!! | TTTAAAATAATTAGTTCTTC+AGG | - | chr1_3:71003902-71003921 | Msa0138220:intron | 15.0% |
| !! | AATTATGAAGAAGAAAAAAT+TGG | - | chr1_3:71004124-71004143 | Msa0138220:intron | 15.0% |
| !!! | TTCTTTATTTTAAGTATGAT+CGG | + | chr1_3:71004346-71004365 | None:intergenic | 15.0% |
| !! | AAAATAACATAAAAACAACA+TGG | - | chr1_3:71004752-71004771 | Msa0138220:intron | 15.0% |
| !! | AATATTTGTGTCTTATAAAT+AGG | + | chr1_3:70999170-70999189 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | + | chr1_3:71005537-71005556 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | + | chr1_3:71005538-71005557 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | - | chr1_3:71005538-71005557 | Msa0138220:intron | 15.0% |
| !! | AACTATTAAAAAAAATTGCA+GGG | + | chr1_3:71005597-71005616 | None:intergenic | 15.0% |
| !! | AAACTATTAAAAAAAATTGC+AGG | + | chr1_3:71005598-71005617 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | - | chr1_3:71005948-71005967 | Msa0138220:CDS | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | - | chr1_3:71005949-71005968 | Msa0138220:CDS | 15.0% |
| !! | AATATTTCACATTAATAGTA+TGG | + | chr1_3:71006359-71006378 | None:intergenic | 15.0% |
| !!! | AAATTTTTTTCTCTTTCAAT+TGG | - | chr1_3:71007279-71007298 | Msa0138220:intron | 15.0% |
| !!! | AAAATTTGTTAACTTCTTTA+GGG | - | chr1_3:71007902-71007921 | Msa0138220:intron | 15.0% |
| !! | TGCTTATAAAAAGTTTCTTA+TGG | - | chr1_3:70995698-70995717 | Msa0138220:intron | 20.0% |
| !! | TACATAGTTGAAAATATGAA+CGG | + | chr1_3:70995745-70995764 | None:intergenic | 20.0% |
| !!! | ATAATTTTTAATGGTAAGTG+AGG | + | chr1_3:70996239-70996258 | None:intergenic | 20.0% |
| !! | AAATTCAAATGAACCAATTA+TGG | - | chr1_3:70996741-70996760 | Msa0138220:intron | 20.0% |
| !! | AATTAATCGTTCAATTCAAA+TGG | + | chr1_3:70996829-70996848 | None:intergenic | 20.0% |
| !! | AAGTAGAAGAAGAATATAAA+AGG | - | chr1_3:70997229-70997248 | Msa0138220:intron | 20.0% |
| !! | AATTACTACAAGTTATATTG+TGG | - | chr1_3:70997308-70997327 | Msa0138220:intron | 20.0% |
| !! | ATTACTACAAGTTATATTGT+GGG | - | chr1_3:70997309-70997328 | Msa0138220:intron | 20.0% |
| !! | ACAATAATATATAACCAAGT+AGG | - | chr1_3:70997540-70997559 | Msa0138220:intron | 20.0% |
| !! | CATTAAATCAATCATTAACT+AGG | + | chr1_3:70997626-70997645 | None:intergenic | 20.0% |
| !! | GGTTAAAAAAAAACAATCTA+AGG | - | chr1_3:70997717-70997736 | Msa0138220:intron | 20.0% |
| !! | ATTCATAAGATAACAATCAT+TGG | + | chr1_3:70997769-70997788 | None:intergenic | 20.0% |
| !! | ATGAGATTAAATTATAGCTT+GGG | - | chr1_3:70997928-70997947 | Msa0138220:intron | 20.0% |
| !!! | TTTTAAGCTTTTTTTTAGGT+AGG | + | chr1_3:70998063-70998082 | None:intergenic | 20.0% |
| !! | CATTGAATAATTGATGTATT+CGG | - | chr1_3:70998355-70998374 | Msa0138220:intron | 20.0% |
| !!! | TTTTTTCTAATAAATAGGAC+CGG | - | chr1_3:70998428-70998447 | Msa0138220:intron | 20.0% |
| !! | AAGTTTAGTATTAGAATCTT+CGG | - | chr1_3:70998538-70998557 | Msa0138220:intron | 20.0% |
| !! | GATACTCATTATAATTCAAA+AGG | + | chr1_3:71000523-71000542 | None:intergenic | 20.0% |
| !!! | ATACAATTTTCACTTCATAA+AGG | + | chr1_3:71000574-71000593 | None:intergenic | 20.0% |
| !! | TATATATATATAGCACAGTA+AGG | - | chr1_3:71000748-71000767 | Msa0138220:intron | 20.0% |
| !! | TTATATATGGTACATTTACT+CGG | + | chr1_3:71000812-71000831 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+TGG | + | chr1_3:71000952-71000971 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr1_3:71001047-71001066 | None:intergenic | 20.0% |
| !!! | TCAATTAAGAAACAGTTTTT+CGG | - | chr1_3:71001440-71001459 | Msa0138220:intron | 20.0% |
| !! | TTGTAAGATAATGAGAATTA+GGG | + | chr1_3:71001743-71001762 | None:intergenic | 20.0% |
| !! | TTTGTAAGATAATGAGAATT+AGG | + | chr1_3:71001744-71001763 | None:intergenic | 20.0% |
| !! | TATTATAAATAAGGAAGCTT+AGG | + | chr1_3:71001951-71001970 | None:intergenic | 20.0% |
| !! | TAGAAAGAAGAATGAATTAT+TGG | + | chr1_3:71002003-71002022 | None:intergenic | 20.0% |
| !! | ATAATAATATTAGCATGATG+TGG | + | chr1_3:71002190-71002209 | None:intergenic | 20.0% |
| !! | ATTAGTAAACATAGATATTG+TGG | + | chr1_3:71002742-71002761 | None:intergenic | 20.0% |
| !! | ATATGATGAACAAATTGAAT+TGG | + | chr1_3:71002851-71002870 | None:intergenic | 20.0% |
| !!! | CTCTAGAATTTGTTATATAA+AGG | + | chr1_3:71002956-71002975 | None:intergenic | 20.0% |
| !! | TTAAGAGACATATATTCTTT+AGG | + | chr1_3:71003259-71003278 | None:intergenic | 20.0% |
| !! | AAAAAGAAAATATATGCAGA+TGG | + | chr1_3:71003480-71003499 | None:intergenic | 20.0% |
| !! | TTCATTGTTTATGAAGATTT+GGG | + | chr1_3:71003730-71003749 | None:intergenic | 20.0% |
| !! | TTTCATTGTTTATGAAGATT+TGG | + | chr1_3:71003731-71003750 | None:intergenic | 20.0% |
| !!! | TAATATTAAAGCATCTTAGA+AGG | + | chr1_3:71003783-71003802 | None:intergenic | 20.0% |
| !! | TAACCATTCTTTATGAATAT+TGG | + | chr1_3:71003838-71003857 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTCATAATTG+TGG | + | chr1_3:71004123-71004142 | None:intergenic | 20.0% |
| !!! | TTAACTTGATTGTATTTGTT+TGG | + | chr1_3:71004150-71004169 | None:intergenic | 20.0% |
| !!! | GATATTTGAAGCTATTAATT+AGG | + | chr1_3:71004469-71004488 | None:intergenic | 20.0% |
| !!! | CTTTCATGAATAATTTTGTT+TGG | + | chr1_3:71004548-71004567 | None:intergenic | 20.0% |
| !! | CAAACAAAATTATTCATGAA+AGG | - | chr1_3:71004546-71004565 | Msa0138220:CDS | 20.0% |
| !! | GAAAATGAATATATCTTAGT+TGG | + | chr1_3:71004616-71004635 | None:intergenic | 20.0% |
| !! | TTTATAGAATATAACCAAGA+AGG | - | chr1_3:71004852-71004871 | Msa0138220:intron | 20.0% |
| !! | AAAAGGAAGAACTTAATTAT+AGG | + | chr1_3:71004918-71004937 | None:intergenic | 20.0% |
| !! | AAAGGAAGAACTTAATTATA+GGG | + | chr1_3:71004917-71004936 | None:intergenic | 20.0% |
| !! | AAAAGGAAGAACTTAATTAT+AGG | + | chr1_3:71004918-71004937 | None:intergenic | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+GGG | + | chr1_3:71005626-71005645 | None:intergenic | 20.0% |
| !!! | TTTCTATATTGGCTAAAATA+TGG | + | chr1_3:71006074-71006093 | None:intergenic | 20.0% |
| !! | ATAATAATATTAGCATGATG+TGG | + | chr1_3:71002190-71002209 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGTTGCTATACT+TGG | + | chr1_3:71006192-71006211 | None:intergenic | 20.0% |
| !!! | TATATGGTATTTGTTTTCTT+TGG | - | chr1_3:71006231-71006250 | Msa0138220:CDS | 20.0% |
| !! | AAATATTGTTCACTTTGTAA+TGG | - | chr1_3:71006372-71006391 | Msa0138220:intron | 20.0% |
| !! | AAAATAAATACAATTTGGGA+CGG | - | chr1_3:71006547-71006566 | Msa0138220:CDS | 20.0% |
| !!! | GATATTCTAAAAACTTGATT+TGG | - | chr1_3:71006633-71006652 | Msa0138220:CDS | 20.0% |
| !!! | AAAAACTTGATTTGGAAATT+AGG | - | chr1_3:71006641-71006660 | Msa0138220:intron | 20.0% |
| !! | AAAATATTACATCTTGTTGA+TGG | - | chr1_3:71006963-71006982 | Msa0138220:intron | 20.0% |
| !! | TGAATATGCAAAAGAAAAAT+GGG | + | chr1_3:71007255-71007274 | None:intergenic | 20.0% |
| !! | ATGAATATGCAAAAGAAAAA+TGG | + | chr1_3:71007256-71007275 | None:intergenic | 20.0% |
| !! | ATCATAATTGTACTACAATT+TGG | + | chr1_3:71007332-71007351 | None:intergenic | 20.0% |
| !!! | CAAAATTTGTTAACTTCTTT+AGG | - | chr1_3:71007901-71007920 | Msa0138220:intron | 20.0% |
| ! | TGTAACTACTTCTTTGATAA+CGG | - | chr1_3:70995192-70995211 | Msa0138220:CDS | 25.0% |
| ! | AAGAAGAATAAACAGAATTG+TGG | + | chr1_3:70995346-70995365 | None:intergenic | 25.0% |
| ! | TGTTAGAAGAAAGTTATTGT+TGG | - | chr1_3:70995417-70995436 | Msa0138220:CDS | 25.0% |
| ! | AACACATATATTGTTTACCT+TGG | + | chr1_3:70995560-70995579 | None:intergenic | 25.0% |
| ! | ATTGTATTACCACATCAAAA+AGG | + | chr1_3:70996068-70996087 | None:intergenic | 25.0% |
| ! | ATTTCATATGCAGACAAAAA+AGG | - | chr1_3:70996150-70996169 | Msa0138220:CDS | 25.0% |
| ! | TCAATTTCTACTCATAATCA+TGG | + | chr1_3:70996270-70996289 | None:intergenic | 25.0% |
| !!! | ATCTAATTTTAACTGTGTTG+CGG | - | chr1_3:70996334-70996353 | Msa0138220:intron | 25.0% |
| ! | TGGTAATTTGAAAATCTGAA+AGG | - | chr1_3:70996428-70996447 | Msa0138220:intron | 25.0% |
| !!! | AAAATCTGAAAGGTATTGAT+TGG | - | chr1_3:70996438-70996457 | Msa0138220:intron | 25.0% |
| !!! | AAATCTGAAAGGTATTGATT+GGG | - | chr1_3:70996439-70996458 | Msa0138220:intron | 25.0% |
| ! | TTCAGTTCAATAAAACTAAC+CGG | - | chr1_3:70996779-70996798 | Msa0138220:intron | 25.0% |
| !!! | ACATATTGTTTTAGTTTAGC+AGG | + | chr1_3:70996946-70996965 | None:intergenic | 25.0% |
| ! | ATGATAGATCTAACATAACT+TGG | + | chr1_3:70996988-70997007 | None:intergenic | 25.0% |
| ! | GAATATAAAAGGATTGAAGA+AGG | - | chr1_3:70997240-70997259 | Msa0138220:intron | 25.0% |
| ! | TCAAAATATGACTTCTTCAA+CGG | + | chr1_3:70997411-70997430 | None:intergenic | 25.0% |
| !!! | AAGAAGTCATATTTTGATTG+TGG | - | chr1_3:70997414-70997433 | Msa0138220:intron | 25.0% |
| !! | TGTAACCATTCTATTTCTTT+GGG | + | chr1_3:70997688-70997707 | None:intergenic | 25.0% |
| ! | AGAATGGTTACAGTAATAAA+TGG | - | chr1_3:70997696-70997715 | Msa0138220:intron | 25.0% |
| ! | TGCAAAAGATATCTAATGAA+TGG | - | chr1_3:70997829-70997848 | Msa0138220:intron | 25.0% |
| ! | GCAAAAGATATCTAATGAAT+GGG | - | chr1_3:70997830-70997849 | Msa0138220:intron | 25.0% |
| !! | AAATTCAATTTTGCAAGCTA+AGG | - | chr1_3:70997876-70997895 | Msa0138220:intron | 25.0% |
| ! | CATGAGATTAAATTATAGCT+TGG | - | chr1_3:70997927-70997946 | Msa0138220:intron | 25.0% |
| ! | TGATAGAAATAAGTGAAAGA+GGG | + | chr1_3:70998231-70998250 | None:intergenic | 25.0% |
| ! | GTCATATGACTAAATGTAAA+TGG | - | chr1_3:70999212-70999231 | Msa0138220:intron | 25.0% |
| !! | AAATTTTTACGTTGGGAAAA+CGG | + | chr1_3:70999308-70999327 | None:intergenic | 25.0% |
| !! | CTTATGAGATTTTTATGTTG+AGG | + | chr1_3:70999496-70999515 | None:intergenic | 25.0% |
| ! | AAATCCATAAGTAATACGTA+AGG | - | chr1_3:70999539-70999558 | Msa0138220:intron | 25.0% |
| ! | TATTCCTTACGTATTACTTA+TGG | + | chr1_3:70999546-70999565 | None:intergenic | 25.0% |
| ! | TTGAGCATAAATATACTCTT+AGG | - | chr1_3:71000035-71000054 | Msa0138220:intron | 25.0% |
| ! | TGAGCATAAATATACTCTTA+GGG | - | chr1_3:71000036-71000055 | Msa0138220:intron | 25.0% |
| ! | GAATACTCATTTATAGATGA+GGG | + | chr1_3:71000151-71000170 | None:intergenic | 25.0% |
| ! | TGAATACTCATTTATAGATG+AGG | + | chr1_3:71000152-71000171 | None:intergenic | 25.0% |
| ! | CATCTATAAATGAGTATTCA+TGG | - | chr1_3:71000152-71000171 | Msa0138220:intron | 25.0% |
| ! | CTTATTTAAGAGGTAAATGT+CGG | + | chr1_3:71000235-71000254 | None:intergenic | 25.0% |
| !! | TGTTGTTGATCTTATTTAAG+AGG | + | chr1_3:71000245-71000264 | None:intergenic | 25.0% |
| ! | CATTATAATTCAAAAGGGTT+TGG | + | chr1_3:71000517-71000536 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr1_3:71000919-71000938 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr1_3:71001241-71001260 | Msa0138220:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr1_3:71001242-71001261 | Msa0138220:intron | 25.0% |
| ! | AGTAAACTCGTAAATTTAGA+TGG | - | chr1_3:71001405-71001424 | Msa0138220:intron | 25.0% |
| !! | AGAAAAACAATCTAAGGTAA+GGG | + | chr1_3:71001836-71001855 | None:intergenic | 25.0% |
| ! | GATTTCAGAAAAACAATCTA+AGG | + | chr1_3:71001842-71001861 | None:intergenic | 25.0% |
| ! | ATTAGTGTAAGTAGAATTGA+AGG | + | chr1_3:71002032-71002051 | None:intergenic | 25.0% |
| ! | ATATATGATTGCCTTTATGA+GGG | + | chr1_3:71002425-71002444 | None:intergenic | 25.0% |
| !! | TGAAGAATGCTCTTTTATTA+AGG | + | chr1_3:71002636-71002655 | None:intergenic | 25.0% |
| ! | TTGTTATATAAAGGTTGACA+TGG | + | chr1_3:71002947-71002966 | None:intergenic | 25.0% |
| ! | TCATTTCCAAATCCTTAAAA+TGG | - | chr1_3:71003034-71003053 | Msa0138220:intron | 25.0% |
| !!! | ATTTGTCCATTTTAAGGATT+TGG | + | chr1_3:71003043-71003062 | None:intergenic | 25.0% |
| ! | TGTGCTACAATATATTTGTA+TGG | + | chr1_3:71003150-71003169 | None:intergenic | 25.0% |
| !! | GTTGTACTTTTGTGTTTATT+TGG | + | chr1_3:71004265-71004284 | None:intergenic | 25.0% |
| ! | TAAAGAAACAGACACATTTA+TGG | - | chr1_3:71004359-71004378 | Msa0138220:intron | 25.0% |
| ! | CTTTATTCATAATTGTCATG+TGG | + | chr1_3:71004437-71004456 | None:intergenic | 25.0% |
| ! | ACTTGAGAACTTTCATATTA+AGG | - | chr1_3:71004571-71004590 | Msa0138220:CDS | 25.0% |
| !! | TTTCTATTTTGTGTATGTGA+TGG | + | chr1_3:71004690-71004709 | None:intergenic | 25.0% |
| ! | TATTACAAGTAATTGCTCTA+TGG | + | chr1_3:71004729-71004748 | None:intergenic | 25.0% |
| ! | AAGGAAGAACTTAATTATAG+GGG | + | chr1_3:71004916-71004935 | None:intergenic | 25.0% |
| ! | TAATAATTAAGCCATCACTT+CGG | - | chr1_3:71005228-71005247 | Msa0138220:intron | 25.0% |
| ! | GAATATAGAAGGCTAAAATA+TGG | - | chr1_3:71005473-71005492 | Msa0138220:intron | 25.0% |
| !! | CCAAAAACAAAAATTTTTGC+AGG | + | chr1_3:71005627-71005646 | None:intergenic | 25.0% |
| !!! | CCTGCAAAAATTTTTGTTTT+TGG | - | chr1_3:71005624-71005643 | Msa0138220:intron | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | chr1_3:71005821-71005840 | Msa0138220:CDS | 25.0% |
| !! | TCCAAAAACAAAAATTTTGC+AGG | - | chr1_3:71005857-71005876 | Msa0138220:CDS | 25.0% |
| !! | CCAAAAACAAAAATTTTGCA+GGG | - | chr1_3:71005858-71005877 | Msa0138220:CDS | 25.0% |
| !! | TATTGGCTAAAATATGGTAT+TGG | + | chr1_3:71006068-71006087 | None:intergenic | 25.0% |
| !!! | TTTGTGTTGATTCTAAAAGT+TGG | + | chr1_3:71006169-71006188 | None:intergenic | 25.0% |
| !! | ATACATTTTTGCATTTCCAT+AGG | - | chr1_3:71006446-71006465 | Msa0138220:intron | 25.0% |
| ! | AGTGATTATTTGACAATTGA+TGG | + | chr1_3:71006516-71006535 | None:intergenic | 25.0% |
| !!! | TTTCAGCCAAAATTTTAACT+AGG | + | chr1_3:71006582-71006601 | None:intergenic | 25.0% |
| !!! | TTTCCTTTGTTATTCTTGAA+AGG | + | chr1_3:71006712-71006731 | None:intergenic | 25.0% |
| ! | CAATAAGAAGAATATAGAGT+TGG | + | chr1_3:71006803-71006822 | None:intergenic | 25.0% |
| ! | AAAGAAAAATGGGAAGAAAA+TGG | + | chr1_3:71007245-71007264 | None:intergenic | 25.0% |
| !! | TTTTTCTCTTTCAATTGGAT+TGG | - | chr1_3:71007284-71007303 | Msa0138220:intron | 25.0% |
| ! | AAATTTACTAATCGGTCAAT+TGG | + | chr1_3:71007391-71007410 | None:intergenic | 25.0% |
| !! | ATGATGGGAAATATTAGTAA+AGG | - | chr1_3:71007627-71007646 | Msa0138220:CDS | 25.0% |
| ! | ATTACTGCATCTTATATTGT+GGG | - | chr1_3:71007858-71007877 | Msa0138220:intron | 25.0% |
| ! | GTAACTACTTCTTTGATAAC+GGG | - | chr1_3:70995193-70995212 | Msa0138220:CDS | 30.0% |
| !! | TAACTACTTCTTTGATAACG+GGG | - | chr1_3:70995194-70995213 | Msa0138220:CDS | 30.0% |
| AATATCAACTACGTCTTTCA+TGG | - | chr1_3:70995222-70995241 | Msa0138220:CDS | 30.0% | |
| GAATAAACAGAATTGTGGTA+GGG | + | chr1_3:70995341-70995360 | None:intergenic | 30.0% | |
| AGAATAAACAGAATTGTGGT+AGG | + | chr1_3:70995342-70995361 | None:intergenic | 30.0% | |
| CACTATTAGGTACTTATCAA+AGG | - | chr1_3:70995468-70995487 | Msa0138220:CDS | 30.0% | |
| TATTAGGTACTTATCAAAGG+TGG | - | chr1_3:70995471-70995490 | Msa0138220:CDS | 30.0% | |
| AAATAGCAACACATGACATT+TGG | + | chr1_3:70995814-70995833 | None:intergenic | 30.0% | |
| ! | GTTTTTATTATAAGTGGAGC+CGG | - | chr1_3:70995889-70995908 | Msa0138220:intron | 30.0% |
| !!! | TTATTTTTTGTCCGCTTTTG+CGG | - | chr1_3:70995961-70995980 | Msa0138220:CDS | 30.0% |
| TTAAGAGATCAATTGACACA+TGG | - | chr1_3:70996408-70996427 | Msa0138220:intron | 30.0% | |
| ATTGAGATATAGACATCCTT+GGG | - | chr1_3:70997044-70997063 | Msa0138220:intron | 30.0% | |
| AAAGACAATGTTTGTATTGC+TGG | - | chr1_3:70997090-70997109 | Msa0138220:intron | 30.0% | |
| AGGTTTGAAGAAATATGCAA+AGG | - | chr1_3:70997260-70997279 | Msa0138220:intron | 30.0% | |
| GTGGGTTCTATTAATGAAAA+TGG | - | chr1_3:70997327-70997346 | Msa0138220:intron | 30.0% | |
| !!! | CTTTTTTAAGGGCAGATTTT+TGG | - | chr1_3:70997365-70997384 | Msa0138220:intron | 30.0% |
| AGTTCACATATTATTGTCCT+GGG | + | chr1_3:70997510-70997529 | None:intergenic | 30.0% | |
| AAGTTCACATATTATTGTCC+TGG | + | chr1_3:70997511-70997530 | None:intergenic | 30.0% | |
| CATAAAATCATACTCCTACT+TGG | + | chr1_3:70997557-70997576 | None:intergenic | 30.0% | |
| AATCAATCATTAACTAGGCT+TGG | + | chr1_3:70997621-70997640 | None:intergenic | 30.0% | |
| ! | CTATTTCTTTGGGAAACTAT+TGG | + | chr1_3:70997678-70997697 | None:intergenic | 30.0% |
| AGTTTCCCAAAGAAATAGAA+TGG | - | chr1_3:70997680-70997699 | Msa0138220:intron | 30.0% | |
| ! | CTGTAACCATTCTATTTCTT+TGG | + | chr1_3:70997689-70997708 | None:intergenic | 30.0% |
| !!! | TTTTTTTAGGTAGGATAGAG+TGG | + | chr1_3:70998054-70998073 | None:intergenic | 30.0% |
| ! | AATAGTTATGGAAAGTGTGA+TGG | - | chr1_3:70998138-70998157 | Msa0138220:intron | 30.0% |
| GAAGAAGATATTGTGATTGT+GGG | - | chr1_3:70998160-70998179 | Msa0138220:intron | 30.0% | |
| GTGATAGAAATAAGTGAAAG+AGG | + | chr1_3:70998232-70998251 | None:intergenic | 30.0% | |
| TATTCAGACAGATCAGTAAA+AGG | + | chr1_3:70998254-70998273 | None:intergenic | 30.0% | |
| TTTCTTATAAATAGGAGCGA+AGG | + | chr1_3:70998317-70998336 | None:intergenic | 30.0% | |
| ! | CGGATTTGCTTTAACAATAT+GGG | - | chr1_3:70998577-70998596 | Msa0138220:intron | 30.0% |
| TAACAATATGGGAAAATGCT+TGG | - | chr1_3:70998588-70998607 | Msa0138220:intron | 30.0% | |
| !!! | GATATAATTTTGGCTTGTAG+TGG | - | chr1_3:70998933-70998952 | Msa0138220:intron | 30.0% |
| !! | CAATGTATAGTGTTACTTGT+TGG | - | chr1_3:70998966-70998985 | Msa0138220:intron | 30.0% |
| AAACTAAAGCACAAGATCAA+AGG | - | chr1_3:70999070-70999089 | Msa0138220:intron | 30.0% | |
| GTGTACTTTACATTGCATAT+AGG | - | chr1_3:70999143-70999162 | Msa0138220:intron | 30.0% | |
| TTGTAAGTTACAAGTGTATG+AGG | - | chr1_3:70999188-70999207 | Msa0138220:intron | 30.0% | |
| TTAGGGAATATAGAAAGCTA+AGG | - | chr1_3:70999264-70999283 | Msa0138220:intron | 30.0% | |
| TATAGAAAGCTAAGGAACAA+TGG | - | chr1_3:70999272-70999291 | Msa0138220:intron | 30.0% | |
| ! | AATTTTTACGTTGGGAAAAC+GGG | + | chr1_3:70999307-70999326 | None:intergenic | 30.0% |
| ! | CCGTTTAAAGTTGAAAAACT+CGG | + | chr1_3:70999342-70999361 | None:intergenic | 30.0% |
| !! | CCGAGTTTTTCAACTTTAAA+CGG | - | chr1_3:70999339-70999358 | Msa0138220:intron | 30.0% |
| CATTTCATGATGATTCAAGA+TGG | + | chr1_3:70999971-70999990 | None:intergenic | 30.0% | |
| TCATGAAATGTAAATGCATG+TGG | - | chr1_3:70999981-71000000 | Msa0138220:intron | 30.0% | |
| AAGTTGTTGGATTACGAAAT+TGG | + | chr1_3:71000629-71000648 | None:intergenic | 30.0% | |
| CAACAACTTATTAACTAGCA+CGG | - | chr1_3:71000640-71000659 | Msa0138220:intron | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr1_3:71001333-71001352 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr1_3:71001332-71001351 | None:intergenic | 30.0% |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr1_3:71000920-71000939 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr1_3:71001179-71001198 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr1_3:71001332-71001351 | Msa0138220:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr1_3:71001333-71001352 | Msa0138220:intron | 30.0% |
| AAACCGTTGAATTGATGTAT+GGG | + | chr1_3:71001689-71001708 | None:intergenic | 30.0% | |
| AAAACCGTTGAATTGATGTA+TGG | + | chr1_3:71001690-71001709 | None:intergenic | 30.0% | |
| ! | TTGAGTGAGAATTGATGATT+AGG | + | chr1_3:71001719-71001738 | None:intergenic | 30.0% |
| ! | CAGAAAAACAATCTAAGGTA+AGG | + | chr1_3:71001837-71001856 | None:intergenic | 30.0% |
| CACTCTTGCTAAATCTATTT+AGG | - | chr1_3:71001976-71001995 | Msa0138220:intron | 30.0% | |
| ! | GGTGCTAGTATTTTATTATG+TGG | + | chr1_3:71002088-71002107 | None:intergenic | 30.0% |
| !! | CTCTAGTAAAGGTTTTAATG+AGG | + | chr1_3:71002250-71002269 | None:intergenic | 30.0% |
| TGGGAAAAAAATTCTAGTGA+AGG | - | chr1_3:71002280-71002299 | Msa0138220:intron | 30.0% | |
| GAGGCAGATTATAACATAAA+AGG | + | chr1_3:71002322-71002341 | None:intergenic | 30.0% | |
| TATATGATTGCCTTTATGAG+GGG | + | chr1_3:71002424-71002443 | None:intergenic | 30.0% | |
| CATATATGATTGCCTTTATG+AGG | + | chr1_3:71002426-71002445 | None:intergenic | 30.0% | |
| GATCACTCAAAATCTTTACT+TGG | - | chr1_3:71002477-71002496 | Msa0138220:intron | 30.0% | |
| TACCTCAAGAAATGCTAATT+TGG | + | chr1_3:71002539-71002558 | None:intergenic | 30.0% | |
| ! | AAACTCGTGGTTTTCTTAAA+GGG | + | chr1_3:71002591-71002610 | None:intergenic | 30.0% |
| TTACAAATACAAGAAACTCG+TGG | + | chr1_3:71002604-71002623 | None:intergenic | 30.0% | |
| ! | GAATGCTCTTTTATTAAGGA+TGG | + | chr1_3:71002632-71002651 | None:intergenic | 30.0% |
| ATCATATCTTAGTTCAAGTG+AGG | + | chr1_3:71002819-71002838 | None:intergenic | 30.0% | |
| GAACTAAGATATGATACTTC+AGG | - | chr1_3:71002824-71002843 | Msa0138220:intron | 30.0% | |
| ! | GACATCATTTGTCCATTTTA+AGG | + | chr1_3:71003049-71003068 | None:intergenic | 30.0% |
| TTACGCAAATGAAATCCTTT+AGG | - | chr1_3:71003097-71003116 | Msa0138220:intron | 30.0% | |
| TACGCAAATGAAATCCTTTA+GGG | - | chr1_3:71003098-71003117 | Msa0138220:intron | 30.0% | |
| TGATATATGAAACTCCCTAA+AGG | + | chr1_3:71003115-71003134 | None:intergenic | 30.0% | |
| TAAATTCAGTAGCACATGAA+AGG | + | chr1_3:71003191-71003210 | None:intergenic | 30.0% | |
| AAAGTTCTTGAATTCACTTG+AGG | - | chr1_3:71003223-71003242 | Msa0138220:intron | 30.0% | |
| TCATGAAAGAAAGATCTCAA+TGG | + | chr1_3:71003616-71003635 | None:intergenic | 30.0% | |
| CCATTCTTTATGAATATTGG+CGG | + | chr1_3:71003835-71003854 | None:intergenic | 30.0% | |
| ! | AAATATTAAAGCATCCTCGA+AGG | + | chr1_3:71003885-71003904 | None:intergenic | 30.0% |
| ! | TTAATATGAAGTATCCCTGA+AGG | + | chr1_3:71003984-71004003 | None:intergenic | 30.0% |
| ! | GAAAGTTTCTATGACTTGTA+TGG | + | chr1_3:71004052-71004071 | None:intergenic | 30.0% |
| TTCTCAAATGTGCATTTGTT+GGG | + | chr1_3:71004491-71004510 | None:intergenic | 30.0% | |
| ATTCTCAAATGTGCATTTGT+TGG | + | chr1_3:71004492-71004511 | None:intergenic | 30.0% | |
| CATATTAAGGCAGAAAAGAA+TGG | - | chr1_3:71004584-71004603 | Msa0138220:CDS | 30.0% | |
| TAAAAACAACATGGACAACA+TGG | - | chr1_3:71004761-71004780 | Msa0138220:intron | 30.0% | |
| CTTTCAAGATTTATCCTTCT+TGG | + | chr1_3:71004869-71004888 | None:intergenic | 30.0% | |
| ! | TTTGCATTTGTTACAACGAA+AGG | + | chr1_3:71004962-71004981 | None:intergenic | 30.0% |
| TTTCGTTGTAACAAATGCAA+AGG | - | chr1_3:71004961-71004980 | Msa0138220:intron | 30.0% | |
| ! | TTTGCATTTGTTACAACGAA+AGG | + | chr1_3:71004962-71004981 | None:intergenic | 30.0% |
| TTTCGTTGTAACAAATGCAA+AGG | - | chr1_3:71004961-71004980 | Msa0138220:intron | 30.0% | |
| TGATTGAGTAACAAATGTAC+AGG | + | chr1_3:71005088-71005107 | None:intergenic | 30.0% | |
| AAACTAAAGCACAAGATCAA+AGG | - | chr1_3:70999070-70999089 | Msa0138220:intron | 30.0% | |
| GTGTACTTTACATTGCATAT+AGG | - | chr1_3:70999143-70999162 | Msa0138220:intron | 30.0% | |
| TTGTAAGTTACAAGTGTATG+AGG | - | chr1_3:70999188-70999207 | Msa0138220:intron | 30.0% | |
| GTCATAGGACTAAATGTAAA+TGG | - | chr1_3:71005416-71005435 | Msa0138220:intron | 30.0% | |
| AGAAGGCTAAAATATGGTAT+TGG | - | chr1_3:71005479-71005498 | Msa0138220:intron | 30.0% | |
| TGACAAATCATCACATAACT+GGG | + | chr1_3:71005664-71005683 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | chr1_3:71005820-71005839 | Msa0138220:CDS | 30.0% | |
| GACAAATCATCACATAATTG+GGG | - | chr1_3:71005822-71005841 | Msa0138220:CDS | 30.0% | |
| !!! | CCCTGCAAAATTTTTGTTTT+TGG | + | chr1_3:71005861-71005880 | None:intergenic | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr1_3:71005920-71005939 | Msa0138220:CDS | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr1_3:71005920-71005939 | Msa0138220:CDS | 30.0% |
| TTAGCCAATATAGAAAGCTA+AGG | - | chr1_3:71006078-71006097 | Msa0138220:CDS | 30.0% | |
| ! | TGTTCCTTAGCTTTCTATAT+TGG | + | chr1_3:70999271-70999290 | None:intergenic | 30.0% |
| GACAATCACTTCTAAGTATA+TGG | - | chr1_3:71006215-71006234 | Msa0138220:CDS | 30.0% | |
| TGTAATGGTCAATCTTCATT+AGG | - | chr1_3:71006387-71006406 | Msa0138220:intron | 30.0% | |
| GTCAATCTTCATTAGGAAAT+TGG | - | chr1_3:71006394-71006413 | Msa0138220:intron | 30.0% | |
| ATATACCTACCACTAAAGAA+AGG | + | chr1_3:71006428-71006447 | None:intergenic | 30.0% | |
| TTATTTGACAATTGATGGAG+TGG | + | chr1_3:71006511-71006530 | None:intergenic | 30.0% | |
| ! | ATCCCTCCTAGTTAAAATTT+TGG | - | chr1_3:71006573-71006592 | Msa0138220:CDS | 30.0% |
| !!! | AGCCAAAATTTTAACTAGGA+GGG | + | chr1_3:71006578-71006597 | None:intergenic | 30.0% |
| !! | TTTGTTATTCTTGAAAGGTG+TGG | + | chr1_3:71006707-71006726 | None:intergenic | 30.0% |
| ACACCTTTCAAGAATAACAA+AGG | - | chr1_3:71006706-71006725 | Msa0138220:intron | 30.0% | |
| ACAAGTGTTTCAATTTGTGT+AGG | - | chr1_3:71006766-71006785 | Msa0138220:intron | 30.0% | |
| TGTTAGAAGGAAGTTATTGT+TGG | - | chr1_3:71006860-71006879 | Msa0138220:intron | 30.0% | |
| !!! | GTGTTTATTGGTTTTTCACA+TGG | - | chr1_3:71007195-71007214 | Msa0138220:intron | 30.0% |
| AAGAAAATGGTATTTCACCT+TGG | + | chr1_3:71007232-71007251 | None:intergenic | 30.0% | |
| ! | GAAGTGATTAGTTCATTAGT+TGG | + | chr1_3:71007359-71007378 | None:intergenic | 30.0% |
| TGTAAAACATGTCAAGAAAG+TGG | + | chr1_3:71007454-71007473 | None:intergenic | 30.0% | |
| CATATTGTTTCAGATTAGCA+GGG | + | chr1_3:71007497-71007516 | None:intergenic | 30.0% | |
| ACATATTGTTTCAGATTAGC+AGG | + | chr1_3:71007498-71007517 | None:intergenic | 30.0% | |
| ! | TGCTAATCTGAAACAATATG+TGG | - | chr1_3:71007497-71007516 | Msa0138220:intron | 30.0% |
| ATTGAGATATAGACATCCTT+GGG | - | chr1_3:70997044-70997063 | Msa0138220:intron | 30.0% | |
| AAAGGAAATGTTTGTGTTGT+TGG | - | chr1_3:71007645-71007664 | Msa0138220:CDS | 30.0% | |
| TTGTATTCTTCTTCTTCCTT+TGG | + | chr1_3:71007777-71007796 | None:intergenic | 30.0% | |
| AGGAAGAAGAAGAATACAAA+AGG | - | chr1_3:71007778-71007797 | Msa0138220:intron | 30.0% | |
| AGAAGAATACAAAAGGATTG+AGG | - | chr1_3:71007785-71007804 | Msa0138220:intron | 30.0% | |
| AATATGCAAGTGAGAGAAAA+TGG | - | chr1_3:71007820-71007839 | Msa0138220:intron | 30.0% | |
| CATTACTGCATCTTATATTG+TGG | - | chr1_3:71007857-71007876 | Msa0138220:intron | 30.0% | |
| ! | CTTCTTTAGGGATAAAATTC+TGG | - | chr1_3:71007914-71007933 | Msa0138220:intron | 30.0% |
| !!! | AAGAAGTCAGATTTTGATTG+TGG | - | chr1_3:71007963-71007982 | Msa0138220:five_prime_UTR | 30.0% |
| AAGATACTACATCTTGCTGA+TGG | - | chr1_3:70995520-70995539 | Msa0138220:CDS | 35.0% | |
| TGGAACAACAATCAAAACCA+AGG | - | chr1_3:70995540-70995559 | Msa0138220:CDS | 35.0% | |
| TTTAGCTAGTGCACATGATT+AGG | - | chr1_3:70995594-70995613 | Msa0138220:CDS | 35.0% | |
| !! | ATGTGTTGCTATTTGCTATG+TGG | - | chr1_3:70995820-70995839 | Msa0138220:intron | 35.0% |
| ! | TGTTGATGGATCTAAAACGA+GGG | + | chr1_3:70995936-70995955 | None:intergenic | 35.0% |
| ! | TTGTTGATGGATCTAAAACG+AGG | + | chr1_3:70995937-70995956 | None:intergenic | 35.0% |
| AATATTGTCAGAGCTCTGTT+TGG | - | chr1_3:70996001-70996020 | Msa0138220:CDS | 35.0% | |
| TATTGCGCACTTAGCAAATT+TGG | - | chr1_3:70996303-70996322 | Msa0138220:CDS | 35.0% | |
| AAAATGGTTAGGCTTCAAAG+AGG | - | chr1_3:70996488-70996507 | Msa0138220:CDS | 35.0% | |
| TACATAACTCTACACGTAAG+AGG | + | chr1_3:70996514-70996533 | None:intergenic | 35.0% | |
| ACGTGTAGAGTTATGTAACT+AGG | - | chr1_3:70996517-70996536 | Msa0138220:intron | 35.0% | |
| CGTGTAGAGTTATGTAACTA+GGG | - | chr1_3:70996518-70996537 | Msa0138220:intron | 35.0% | |
| GTGTAGAGTTATGTAACTAG+GGG | - | chr1_3:70996519-70996538 | Msa0138220:intron | 35.0% | |
| CTGAGTACATCATGAACATT+GGG | + | chr1_3:70996578-70996597 | None:intergenic | 35.0% | |
| ATACAATACCCTTTGATCCA+TGG | - | chr1_3:70996686-70996705 | Msa0138220:intron | 35.0% | |
| GTGAAAAACCATGGATCAAA+GGG | + | chr1_3:70996697-70996716 | None:intergenic | 35.0% | |
| TGTGAAAAACCATGGATCAA+AGG | + | chr1_3:70996698-70996717 | None:intergenic | 35.0% | |
| GAACTGAATTGAACCAAGTT+GGG | + | chr1_3:70996767-70996786 | None:intergenic | 35.0% | |
| TGAACTGAATTGAACCAAGT+TGG | + | chr1_3:70996768-70996787 | None:intergenic | 35.0% | |
| AAACTAACCGGTGAACTAAT+CGG | - | chr1_3:70996791-70996810 | Msa0138220:intron | 35.0% | |
| ! | ACTATAACCGATTAGTTCAC+CGG | + | chr1_3:70996801-70996820 | None:intergenic | 35.0% |
| GTAAAACAAATCGAGTGAAG+TGG | + | chr1_3:70996901-70996920 | None:intergenic | 35.0% | |
| CAAGGATGTCTATATCTCAA+TGG | + | chr1_3:70997045-70997064 | None:intergenic | 35.0% | |
| CATTGAGATATAGACATCCT+TGG | - | chr1_3:70997043-70997062 | Msa0138220:intron | 35.0% | |
| ! | TACTTCTTCCTTTGGTTTCT+TGG | + | chr1_3:70997214-70997233 | None:intergenic | 35.0% |
| TCTTCTTCTACTTCTTCCTT+TGG | + | chr1_3:70997222-70997241 | None:intergenic | 35.0% | |
| AATATGCAAAGGAGAGAAGA+TGG | - | chr1_3:70997271-70997290 | Msa0138220:intron | 35.0% | |
| GTTCACATATTATTGTCCTG+GGG | + | chr1_3:70997509-70997528 | None:intergenic | 35.0% | |
| GGAAGAAGATATTGTGATTG+TGG | - | chr1_3:70998159-70998178 | Msa0138220:intron | 35.0% | |
| TTCTAATAAATAGGACCGGA+TGG | - | chr1_3:70998432-70998451 | Msa0138220:intron | 35.0% | |
| CATTGACAATATACTCCATC+CGG | + | chr1_3:70998450-70998469 | None:intergenic | 35.0% | |
| GATGCTGATAATTGCAGATT+AGG | - | chr1_3:70998509-70998528 | Msa0138220:intron | 35.0% | |
| ! | GCGGATTTGCTTTAACAATA+TGG | - | chr1_3:70998576-70998595 | Msa0138220:intron | 35.0% |
| AATATGGGAAAATGCTTGGA+AGG | - | chr1_3:70998592-70998611 | Msa0138220:intron | 35.0% | |
| ATCAACATATGCAGCTTCAT+GGG | - | chr1_3:70998651-70998670 | Msa0138220:intron | 35.0% | |
| !! | TGGAGTGTTGCTATTTAGTA+TGG | - | chr1_3:70998845-70998864 | Msa0138220:intron | 35.0% |
| AAATATCACCAGAACAGAAG+AGG | - | chr1_3:70998881-70998900 | Msa0138220:intron | 35.0% | |
| !!! | TGTTACTTGTTGGTTTTCGT+TGG | - | chr1_3:70998976-70998995 | Msa0138220:intron | 35.0% |
| GACTAAAGCCATTTACTCAT+AGG | - | chr1_3:70999239-70999258 | Msa0138220:intron | 35.0% | |
| CCATTTACTCATAGGAGTTA+GGG | - | chr1_3:70999247-70999266 | Msa0138220:intron | 35.0% | |
| ! | ATTTTTACGTTGGGAAAACG+GGG | + | chr1_3:70999306-70999325 | None:intergenic | 35.0% |
| AGTAATTCAAAACTTCGCAG+CGG | - | chr1_3:70999431-70999450 | Msa0138220:intron | 35.0% | |
| AAAAATAATCTTTGGCACGC+AGG | - | chr1_3:70999470-70999489 | Msa0138220:intron | 35.0% | |
| ! | AATGCATGTGGTACCATTTT+AGG | - | chr1_3:70999993-71000012 | Msa0138220:intron | 35.0% |
| ! | ATGCATGTGGTACCATTTTA+GGG | - | chr1_3:70999994-71000013 | Msa0138220:intron | 35.0% |
| CGTGCTAGTTAATAAGTTGT+TGG | + | chr1_3:71000642-71000661 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr1_3:71001317-71001336 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr1_3:71001317-71001336 | Msa0138220:intron | 35.0% | |
| ATTTACGAGTTTACTCGACT+TGG | + | chr1_3:71001400-71001419 | None:intergenic | 35.0% | |
| GATACATGAGAGAAAAGGAT+AGG | + | chr1_3:71001469-71001488 | None:intergenic | 35.0% | |
| AAGTCGATACATGAGAGAAA+AGG | + | chr1_3:71001474-71001493 | None:intergenic | 35.0% | |
| CTTTGATTCCGATTCAGTAT+TGG | + | chr1_3:71001590-71001609 | None:intergenic | 35.0% | |
| ATGAACATATGGGTAGTGAA+GGG | + | chr1_3:71001639-71001658 | None:intergenic | 35.0% | |
| TATGAACATATGGGTAGTGA+AGG | + | chr1_3:71001640-71001659 | None:intergenic | 35.0% | |
| TAAGGGCTGTATGAACATAT+GGG | + | chr1_3:71001649-71001668 | None:intergenic | 35.0% | |
| ATAAGGGCTGTATGAACATA+TGG | + | chr1_3:71001650-71001669 | None:intergenic | 35.0% | |
| ATATGTTCATACAGCCCTTA+TGG | - | chr1_3:71001649-71001668 | Msa0138220:intron | 35.0% | |
| AACCGTTGAATTGATGTATG+GGG | + | chr1_3:71001688-71001707 | None:intergenic | 35.0% | |
| ! | GATTGCATCTAACGTGTTTT+AGG | + | chr1_3:71001773-71001792 | None:intergenic | 35.0% |
| TTAATGAGGCATATCCTTCA+TGG | + | chr1_3:71002236-71002255 | None:intergenic | 35.0% | |
| ACCTTTACTAGAGAAAAACC+CGG | - | chr1_3:71002257-71002276 | Msa0138220:intron | 35.0% | |
| !!! | ACTAGAATTTTTTTCCCACC+GGG | + | chr1_3:71002278-71002297 | None:intergenic | 35.0% |
| !!! | CACTAGAATTTTTTTCCCAC+CGG | + | chr1_3:71002279-71002298 | None:intergenic | 35.0% |
| !!! | AACCATGGTTTTATCCCATT+GGG | + | chr1_3:71002367-71002386 | None:intergenic | 35.0% |
| !!! | TAACCATGGTTTTATCCCAT+TGG | + | chr1_3:71002368-71002387 | None:intergenic | 35.0% |
| ATGGGATAAAACCATGGTTA+AGG | - | chr1_3:71002368-71002387 | Msa0138220:intron | 35.0% | |
| TGGGATAAAACCATGGTTAA+GGG | - | chr1_3:71002369-71002388 | Msa0138220:intron | 35.0% | |
| ATATGATTGCCTTTATGAGG+GGG | + | chr1_3:71002423-71002442 | None:intergenic | 35.0% | |
| CACTCAAAATCTTTACTTGG+CGG | - | chr1_3:71002480-71002499 | Msa0138220:intron | 35.0% | |
| CTCCAAATTAGCATTTCTTG+AGG | - | chr1_3:71002534-71002553 | Msa0138220:intron | 35.0% | |
| ! | AACTCGTGGTTTTCTTAAAG+GGG | + | chr1_3:71002590-71002609 | None:intergenic | 35.0% |
| ! | GAAACTCGTGGTTTTCTTAA+AGG | + | chr1_3:71002592-71002611 | None:intergenic | 35.0% |
| !! | ACAAATTCTAGAGTCTCTTC+AGG | - | chr1_3:71002963-71002982 | Msa0138220:intron | 35.0% |
| GACATTTACCAATTCACTTC+AGG | - | chr1_3:71003291-71003310 | Msa0138220:intron | 35.0% | |
| TATGTTCACCTGAAGTGAAT+TGG | + | chr1_3:71003302-71003321 | None:intergenic | 35.0% | |
| AAGATCTCAATGGAATGAGA+TGG | + | chr1_3:71003606-71003625 | None:intergenic | 35.0% | |
| CCGCCAATATTCATAAAGAA+TGG | - | chr1_3:71003832-71003851 | Msa0138220:intron | 35.0% | |
| ATTATTTGAGCAAACCTTCG+AGG | - | chr1_3:71003868-71003887 | Msa0138220:intron | 35.0% | |
| TTGTCATGTGGTTACACATT+AGG | + | chr1_3:71004425-71004444 | None:intergenic | 35.0% | |
| TCTATGGAAACACACAAACT+TGG | + | chr1_3:71004713-71004732 | None:intergenic | 35.0% | |
| CAATGAGACAAACAACAACT+TGG | - | chr1_3:71004785-71004804 | Msa0138220:intron | 35.0% | |
| TTGGTAAGAGATGTTATGTG+AGG | - | chr1_3:71004804-71004823 | Msa0138220:intron | 35.0% | |
| GACTAAGCAAAAGAAGCAAA+AGG | + | chr1_3:71004935-71004954 | None:intergenic | 35.0% | |
| ! | AACAAATGCAAAGGCTTTGT+AGG | - | chr1_3:71004970-71004989 | Msa0138220:intron | 35.0% |
| GACTAAGCAAAAGAAGCAAA+AGG | + | chr1_3:71004935-71004954 | None:intergenic | 35.0% | |
| ! | AACAAATGCAAAGGCTTTGT+AGG | - | chr1_3:71004970-71004989 | Msa0138220:intron | 35.0% |
| GACTAAAGCCATTTACTCAT+AGG | - | chr1_3:70999239-70999258 | Msa0138220:intron | 35.0% | |
| CCATTTACTCATAGGAGTTA+GGG | - | chr1_3:70999247-70999266 | Msa0138220:intron | 35.0% | |
| TAGGAGTTAGGGAATATAGA+AGG | - | chr1_3:70999258-70999277 | Msa0138220:intron | 35.0% | |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr1_3:71005554-71005573 | Msa0138220:intron | 35.0% |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | + | chr1_3:71005565-71005584 | None:intergenic | 35.0% |
| GACAAATCATCACATAACTG+GGG | + | chr1_3:71005663-71005682 | None:intergenic | 35.0% | |
| GTGACAAATCATCACATAAC+TGG | + | chr1_3:71005665-71005684 | None:intergenic | 35.0% | |
| !!! | TGTCACTTTTTGTGCATATG+TGG | + | chr1_3:71005806-71005825 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr1_3:71005921-71005940 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr1_3:71005919-71005938 | Msa0138220:CDS | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr1_3:71005554-71005573 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr1_3:71005921-71005940 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr1_3:71005919-71005938 | Msa0138220:CDS | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr1_3:71005554-71005573 | None:intergenic | 35.0% |
| ! | CAAAACTGACCTATTTTGCA+GGG | - | chr1_3:71006041-71006060 | Msa0138220:CDS | 35.0% |
| GATTATCGACCTTTCTTTAG+TGG | - | chr1_3:71006416-71006435 | Msa0138220:intron | 35.0% | |
| !!! | CAGCCAAAATTTTAACTAGG+AGG | + | chr1_3:71006579-71006598 | None:intergenic | 35.0% |
| TGTGACGACTACTTTGATTA+CGG | - | chr1_3:71006666-71006685 | Msa0138220:intron | 35.0% | |
| AAGAATATAGAGTTGGAGCA+GGG | + | chr1_3:71006796-71006815 | None:intergenic | 35.0% | |
| AACCTTTGACATGTACCTAA+TGG | + | chr1_3:71006916-71006935 | None:intergenic | 35.0% | |
| !!! | AATCAACACCTTGGTTTTGA+TGG | + | chr1_3:71006994-71007013 | None:intergenic | 35.0% |
| !! | ATCAAAACCAAGGTGTTGAT+TGG | - | chr1_3:71006993-71007012 | Msa0138220:intron | 35.0% |
| !! | TCAAAACCAAGGTGTTGATT+GGG | - | chr1_3:71006994-71007013 | Msa0138220:intron | 35.0% |
| ! | CTCTTTCAATTGGATTGGAT+CGG | - | chr1_3:71007289-71007308 | Msa0138220:intron | 35.0% |
| CAAGGATGTCTATATCTCAA+TGG | + | chr1_3:70997045-70997064 | None:intergenic | 35.0% | |
| CATTGAGATATAGACATCCT+TGG | - | chr1_3:70997043-70997062 | Msa0138220:intron | 35.0% | |
| ! | TTCCTTTGGTTTCTTGGAAA+AGG | + | chr1_3:70997208-70997227 | None:intergenic | 35.0% |
| ! | TTCTTCTTCCTTTGGTTTCT+TGG | + | chr1_3:71007769-71007788 | None:intergenic | 35.0% |
| ! | GTGGGTTATATTCAACAAAG+TGG | - | chr1_3:71007876-71007895 | Msa0138220:intron | 35.0% |
| ACGTCTTTCATGGACAACAA+AGG | - | chr1_3:70995232-70995251 | Msa0138220:CDS | 40.0% | |
| !! | TGTGTTTTTATGCCATGCAG+TGG | - | chr1_3:70995373-70995392 | Msa0138220:CDS | 40.0% |
| TCTAACACAACGAACTTCAC+AGG | + | chr1_3:70995404-70995423 | None:intergenic | 40.0% | |
| ! | AAGTACCTAATAGTGCCACT+TGG | + | chr1_3:70995463-70995482 | None:intergenic | 40.0% |
| ! | ATCAAAGGTGGTTGCTATTC+AGG | - | chr1_3:70995483-70995502 | Msa0138220:CDS | 40.0% |
| GTGCACTAGCTAAATGCAAT+AGG | + | chr1_3:70995588-70995607 | None:intergenic | 40.0% | |
| !! | TGTTGCTATTTGCTATGTGG+TGG | - | chr1_3:70995823-70995842 | Msa0138220:intron | 40.0% |
| TTATAAGTGGAGCCGGATTA+AGG | - | chr1_3:70995896-70995915 | Msa0138220:intron | 40.0% | |
| TTCATATCCCTGCCTTAATC+CGG | + | chr1_3:70995911-70995930 | None:intergenic | 40.0% | |
| !! | AAGGTATTGATTGGGTGTGA+TGG | - | chr1_3:70996447-70996466 | Msa0138220:intron | 40.0% |
| TGAACTCTATGGTGGCAAAA+TGG | - | chr1_3:70996472-70996491 | Msa0138220:CDS | 40.0% | |
| TCTATGGTGGCAAAATGGTT+AGG | - | chr1_3:70996477-70996496 | Msa0138220:CDS | 40.0% | |
| CCTGAGTACATCATGAACAT+TGG | + | chr1_3:70996579-70996598 | None:intergenic | 40.0% | |
| CCAATGTTCATGATGTACTC+AGG | - | chr1_3:70996576-70996595 | Msa0138220:intron | 40.0% | |
| TTCATGATGTACTCAGGCAA+AGG | - | chr1_3:70996582-70996601 | Msa0138220:intron | 40.0% | |
| !!! | TCAGGCAAAGGTTTTCAAGT+TGG | - | chr1_3:70996594-70996613 | Msa0138220:intron | 40.0% |
| TAAGCACACTTGTCATCACA+TGG | + | chr1_3:70996627-70996646 | None:intergenic | 40.0% | |
| GTGATGACAAGTGTGCTTAT+TGG | - | chr1_3:70996628-70996647 | Msa0138220:intron | 40.0% | |
| TTGTATTCACCTTGCTTGCT+AGG | + | chr1_3:70996672-70996691 | None:intergenic | 40.0% | |
| GGAGTACATGTGAAAAACCA+TGG | + | chr1_3:70996706-70996725 | None:intergenic | 40.0% | |
| ACATCCTTGGGAGCTTATAA+TGG | - | chr1_3:70997056-70997075 | Msa0138220:intron | 40.0% | |
| CATCCTTGGGAGCTTATAAT+GGG | - | chr1_3:70997057-70997076 | Msa0138220:intron | 40.0% | |
| TTTCCCATTATAAGCTCCCA+AGG | + | chr1_3:70997063-70997082 | None:intergenic | 40.0% | |
| ! | GGCATTTTCCAAGAAACCAA+AGG | - | chr1_3:70997203-70997222 | Msa0138220:intron | 40.0% |
| ATGGGATGTGAGTGAACATA+TGG | - | chr1_3:70997848-70997867 | Msa0138220:intron | 40.0% | |
| AGGTATGCCTAAATGACGTA+TGG | - | chr1_3:70997896-70997915 | Msa0138220:intron | 40.0% | |
| ! | GGAGAAACTTGCTTTAGGTA+AGG | + | chr1_3:70998033-70998052 | None:intergenic | 40.0% |
| ! | AGAGTGGAGAAACTTGCTTT+AGG | + | chr1_3:70998038-70998057 | None:intergenic | 40.0% |
| CATGAAGCTGCATATGTTGA+TGG | + | chr1_3:70998652-70998671 | None:intergenic | 40.0% | |
| CATCAACATATGCAGCTTCA+TGG | - | chr1_3:70998650-70998669 | Msa0138220:intron | 40.0% | |
| !! | TTGGCTTGTAGTGGAAATCA+TGG | - | chr1_3:70998942-70998961 | Msa0138220:intron | 40.0% |
| GCCATTTACTCATAGGAGTT+AGG | - | chr1_3:70999246-70999265 | Msa0138220:intron | 40.0% | |
| CCCTAACTCCTATGAGTAAA+TGG | + | chr1_3:70999250-70999269 | None:intergenic | 40.0% | |
| TTAGGTGCTCTGATACGTAA+CGG | + | chr1_3:70999592-70999611 | None:intergenic | 40.0% | |
| GGAAATGTTGCTCTTCGTAT+GGG | + | chr1_3:70999673-70999692 | None:intergenic | 40.0% | |
| TGGAAATGTTGCTCTTCGTA+TGG | + | chr1_3:70999674-70999693 | None:intergenic | 40.0% | |
| AGCAACATTTCCAAGCAGAT+GGG | - | chr1_3:70999681-70999700 | Msa0138220:intron | 40.0% | |
| TTTATGCTCAACGACGATGA+GGG | + | chr1_3:71000026-71000045 | None:intergenic | 40.0% | |
| ATTTATGCTCAACGACGATG+AGG | + | chr1_3:71000027-71000046 | None:intergenic | 40.0% | |
| ! | GATGGAGCTTTTGCTCAAAA+TGG | + | chr1_3:71000096-71000115 | None:intergenic | 40.0% |
| GGACTACAACTCAGTACTAT+TGG | - | chr1_3:71000769-71000788 | Msa0138220:intron | 40.0% | |
| TCGACTGTCCAATACTGAAT+CGG | - | chr1_3:71001579-71001598 | Msa0138220:intron | 40.0% | |
| GCAGTCTCTATTCACCATAA+GGG | + | chr1_3:71001666-71001685 | None:intergenic | 40.0% | |
| TGCCCCATACATCAATTCAA+CGG | - | chr1_3:71001683-71001702 | Msa0138220:intron | 40.0% | |
| ! | TTTTACGTTAGACCGCTCTT+TGG | + | chr1_3:71001917-71001936 | None:intergenic | 40.0% |
| !! | ATAAAAGGAGGGCGTTACAA+TGG | - | chr1_3:71002160-71002179 | Msa0138220:intron | 40.0% |
| TTATTCATAACACTCCCCCT+TGG | - | chr1_3:71002206-71002225 | Msa0138220:intron | 40.0% | |
| TATCCTTCATGGACATCCAA+GGG | + | chr1_3:71002225-71002244 | None:intergenic | 40.0% | |
| ATATCCTTCATGGACATCCA+AGG | + | chr1_3:71002226-71002245 | None:intergenic | 40.0% | |
| ! | ACCGGGTTTTTCTCTAGTAA+AGG | + | chr1_3:71002261-71002280 | None:intergenic | 40.0% |
| TTTACTAGAGAAAAACCCGG+TGG | - | chr1_3:71002260-71002279 | Msa0138220:intron | 40.0% | |
| TTACTAGAGAAAAACCCGGT+GGG | - | chr1_3:71002261-71002280 | Msa0138220:intron | 40.0% | |
| ! | TCCTGGTAAGGTTTTTAACG+AGG | + | chr1_3:71002341-71002360 | None:intergenic | 40.0% |
| ! | TTTATCCCATTGGGTTTTCC+TGG | + | chr1_3:71002358-71002377 | None:intergenic | 40.0% |
| AACCCAATGGGATAAAACCA+TGG | - | chr1_3:71002362-71002381 | Msa0138220:intron | 40.0% | |
| ! | CACTCTTTTTCCCTTAACCA+TGG | + | chr1_3:71002382-71002401 | None:intergenic | 40.0% |
| TTTATGTCTCCCCCTCATAA+AGG | - | chr1_3:71002411-71002430 | Msa0138220:intron | 40.0% | |
| ! | TATGGTTTTTCGCGCGAAAA+GGG | + | chr1_3:71003361-71003380 | None:intergenic | 40.0% |
| ATTTCACATCTTCGAGTGTG+CGG | - | chr1_3:71003393-71003412 | Msa0138220:intron | 40.0% | |
| ! | GCTTTGCAAAGCTGGATTTT+TGG | + | chr1_3:71003428-71003447 | None:intergenic | 40.0% |
| ATTCTTTACGCGATCCTTCA+GGG | - | chr1_3:71003967-71003986 | Msa0138220:intron | 40.0% | |
| ! | GCATTTGTTACAACGAAAGG+TGG | + | chr1_3:71004959-71004978 | None:intergenic | 40.0% |
| ! | GCATTTGTTACAACGAAAGG+TGG | + | chr1_3:71004959-71004978 | None:intergenic | 40.0% |
| ACAAGTGTATGAGGAGTCAT+AGG | - | chr1_3:70999197-70999216 | Msa0138220:intron | 40.0% | |
| GCCATTTACTCATAGGAGTT+AGG | - | chr1_3:70999246-70999265 | Msa0138220:intron | 40.0% | |
| CCCTAACTCCTATGAGTAAA+TGG | + | chr1_3:70999250-70999269 | None:intergenic | 40.0% | |
| !! | GGTATTGGTCCTTGCAAAAT+AGG | - | chr1_3:71005494-71005513 | Msa0138220:intron | 40.0% |
| !! | CAAAACTGGCCTATTTTGCA+AGG | + | chr1_3:71005506-71005525 | None:intergenic | 40.0% |
| ! | CTTGCAAAATAGGCCAGTTT+TGG | - | chr1_3:71005504-71005523 | Msa0138220:intron | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | + | chr1_3:71005566-71005585 | None:intergenic | 40.0% |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | - | chr1_3:71005564-71005583 | Msa0138220:intron | 40.0% |
| ATCATCACATAATTGGGGTC+AGG | - | chr1_3:71005827-71005846 | Msa0138220:CDS | 40.0% | |
| TCATCACATAATTGGGGTCA+GGG | - | chr1_3:71005828-71005847 | Msa0138220:CDS | 40.0% | |
| ! | CCTGCAAAATAGGTCAGTTT+TGG | + | chr1_3:71006043-71006062 | None:intergenic | 40.0% |
| ! | CCAAAACTGACCTATTTTGC+AGG | - | chr1_3:71006040-71006059 | Msa0138220:CDS | 40.0% |
| ATCGACCTTTCTTTAGTGGT+AGG | - | chr1_3:71006420-71006439 | Msa0138220:intron | 40.0% | |
| GAATTCGAGACACTGCTTTA+TGG | - | chr1_3:71006471-71006490 | Msa0138220:intron | 40.0% | |
| ACAATTGATGGAGTGGAACT+TGG | + | chr1_3:71006504-71006523 | None:intergenic | 40.0% | |
| GTGACGACTACTTTGATTAC+GGG | - | chr1_3:71006667-71006686 | Msa0138220:intron | 40.0% | |
| TGACGACTACTTTGATTACG+GGG | - | chr1_3:71006668-71006687 | Msa0138220:intron | 40.0% | |
| GAAGAATATAGAGTTGGAGC+AGG | + | chr1_3:71006797-71006816 | None:intergenic | 40.0% | |
| GTGAAGTTCGTTGTGTTAGA+AGG | - | chr1_3:70995404-70995423 | Msa0138220:CDS | 40.0% | |
| CACCATTAGGTACATGTCAA+AGG | - | chr1_3:71006911-71006930 | Msa0138220:intron | 40.0% | |
| ! | GTCAAAGGTTGTTGCTATTC+AGG | - | chr1_3:71006926-71006945 | Msa0138220:intron | 40.0% |
| ! | GTTGTTGCTATTCAGGAATC+TGG | - | chr1_3:71006933-71006952 | Msa0138220:intron | 40.0% |
| TGGAACAACCATCAAAACCA+AGG | - | chr1_3:71006983-71007002 | Msa0138220:intron | 40.0% | |
| AAAGTGGTTAGGCTTCAAAG+AGG | - | chr1_3:71007043-71007062 | Msa0138220:intron | 40.0% | |
| CTTTAACTCTGCATAACCTC+TGG | + | chr1_3:71007093-71007112 | None:intergenic | 40.0% | |
| !! | CCAAAGTACTGCATGAACAT+TGG | + | chr1_3:71007134-71007153 | None:intergenic | 40.0% |
| CCAATGTTCATGCAGTACTT+TGG | - | chr1_3:71007131-71007150 | Msa0138220:intron | 40.0% | |
| TTCATGCAGTACTTTGGCAA+AGG | - | chr1_3:71007137-71007156 | Msa0138220:intron | 40.0% | |
| !!! | TTTGGCAAAGGTTTTAGAGC+TGG | - | chr1_3:71007149-71007168 | Msa0138220:intron | 40.0% |
| !!! | TTGGCAAAGGTTTTAGAGCT+GGG | - | chr1_3:71007150-71007169 | Msa0138220:intron | 40.0% |
| TAAACACTCCTCTCATCACA+TGG | + | chr1_3:71007182-71007201 | None:intergenic | 40.0% | |
| !! | GTGATGAGAGGAGTGTTTAT+TGG | - | chr1_3:71007183-71007202 | Msa0138220:intron | 40.0% |
| GGTATTTCACCTTGGCTAAT+AGG | + | chr1_3:71007224-71007243 | None:intergenic | 40.0% | |
| TCTTCAACAGTTGAACAGCT+AGG | + | chr1_3:71007947-71007966 | None:intergenic | 40.0% | |
| ! | GTTTTTATGCCATGCAGTGG+AGG | - | chr1_3:70995376-70995395 | Msa0138220:CDS | 45.0% |
| CTTACCAATGAGCTTCCAAG+TGG | - | chr1_3:70995445-70995464 | Msa0138220:CDS | 45.0% | |
| AGCTTCCAAGTGGCACTATT+AGG | - | chr1_3:70995455-70995474 | Msa0138220:CDS | 45.0% | |
| ! | GTGGTTGCTATTCAGGAATC+TGG | - | chr1_3:70995490-70995509 | Msa0138220:CDS | 45.0% |
| GTTGTCTTCAACCCTTCCTT+AGG | - | chr1_3:70995618-70995637 | Msa0138220:CDS | 45.0% | |
| !! | TTTTGTCCGCTTTTGCGGTT+TGG | - | chr1_3:70995966-70995985 | Msa0138220:CDS | 45.0% |
| ACAAAGCCAAACCGCAAAAG+CGG | + | chr1_3:70995975-70995994 | None:intergenic | 45.0% | |
| TCAGAGCTCTGTTTGGATTC+AGG | - | chr1_3:70996008-70996027 | Msa0138220:CDS | 45.0% | |
| TCCTTTGCACATCTTGTGCT+AGG | - | chr1_3:70996038-70996057 | Msa0138220:CDS | 45.0% | |
| TCCTAGCACAAGATGTGCAA+AGG | + | chr1_3:70996042-70996061 | None:intergenic | 45.0% | |
| TTGCACATCTTGTGCTAGGA+AGG | - | chr1_3:70996042-70996061 | Msa0138220:CDS | 45.0% | |
| ! | CTAGGAAGGCCTTTTTGATG+TGG | - | chr1_3:70996056-70996075 | Msa0138220:CDS | 45.0% |
| ! | GTGTGATGGAGTGAACTCTA+TGG | - | chr1_3:70996461-70996480 | Msa0138220:CDS | 45.0% |
| TGATGGAGTGAACTCTATGG+TGG | - | chr1_3:70996464-70996483 | Msa0138220:CDS | 45.0% | |
| ! | TAGGGGTTATGCTGAGTTGA+AGG | - | chr1_3:70996536-70996555 | Msa0138220:intron | 45.0% |
| TGTACTACTCCTAGCAAGCA+AGG | - | chr1_3:70996660-70996679 | Msa0138220:intron | 45.0% | |
| GAACCAATTATGGCCCAACT+TGG | - | chr1_3:70996751-70996770 | Msa0138220:intron | 45.0% | |
| ! | GAACCAAGTTGGGCCATAAT+TGG | + | chr1_3:70996757-70996776 | None:intergenic | 45.0% |
| ! | GTGCAAGATAAGGTGCCATA+GGG | + | chr1_3:70997128-70997147 | None:intergenic | 45.0% |
| ! | TGTGCAAGATAAGGTGCCAT+AGG | + | chr1_3:70997129-70997148 | None:intergenic | 45.0% |
| ATGGCACCTTATCTTGCACA+AGG | - | chr1_3:70997129-70997148 | Msa0138220:intron | 45.0% | |
| TGGCACCTTATCTTGCACAA+GGG | - | chr1_3:70997130-70997149 | Msa0138220:intron | 45.0% | |
| !! | GGTGTTGTGCTTTAGAGGAT+GGG | - | chr1_3:70997154-70997173 | Msa0138220:intron | 45.0% |
| !! | GTGTTGTGCTTTAGAGGATG+GGG | - | chr1_3:70997155-70997174 | Msa0138220:intron | 45.0% |
| TCTTGGAAAATGCCTCACCT+AGG | + | chr1_3:70997197-70997216 | None:intergenic | 45.0% | |
| TTGCTTTGATCATCTTCCCC+AGG | - | chr1_3:70997490-70997509 | Msa0138220:intron | 45.0% | |
| GATATTGTGATTGTGGGAGC+TGG | - | chr1_3:70998166-70998185 | Msa0138220:intron | 45.0% | |
| ! | TGCTGGTCTCACAACATCTT+TGG | - | chr1_3:70998192-70998211 | Msa0138220:intron | 45.0% |
| CAACATCTTTGGCACTTCAC+AGG | - | chr1_3:70998203-70998222 | Msa0138220:intron | 45.0% | |
| ! | TCGGATAGTTTGCGAGTAAG+CGG | - | chr1_3:70998557-70998576 | Msa0138220:intron | 45.0% |
| TCCAACACCAACAACATCCA+AGG | + | chr1_3:70998618-70998637 | None:intergenic | 45.0% | |
| TATCACCAGAACAGAAGAGG+CGG | - | chr1_3:70998884-70998903 | Msa0138220:intron | 45.0% | |
| GCACAAGATCAAAGGAGAAG+AGG | - | chr1_3:70999078-70999097 | Msa0138220:intron | 45.0% | |
| CAAAGGAGAAGAGGAAGAAG+AGG | - | chr1_3:70999087-70999106 | Msa0138220:intron | 45.0% | |
| TAGGTGCTCTGATACGTAAC+GGG | + | chr1_3:70999591-70999610 | None:intergenic | 45.0% | |
| ACTCCTCACAAGTGTGTCTT+AGG | + | chr1_3:70999610-70999629 | None:intergenic | 45.0% | |
| !! | CAGGTAACCAGGATTAGTTG+CGG | + | chr1_3:70999643-70999662 | None:intergenic | 45.0% |
| ! | TCTTCGTATGGGTAACTTGC+AGG | + | chr1_3:70999662-70999681 | None:intergenic | 45.0% |
| GAGCAACATTTCCAAGCAGA+TGG | - | chr1_3:70999680-70999699 | Msa0138220:intron | 45.0% | |
| GCAACATTTCCAAGCAGATG+GGG | - | chr1_3:70999682-70999701 | Msa0138220:intron | 45.0% | |
| TGAGGGCTTATGCCCTAAAA+TGG | + | chr1_3:71000009-71000028 | None:intergenic | 45.0% | |
| ! | CTTTTGCTCAACCACGATGA+TGG | + | chr1_3:71000114-71000133 | None:intergenic | 45.0% |
| GGCAGTCTCTATTCACCATA+AGG | + | chr1_3:71001667-71001686 | None:intergenic | 45.0% | |
| AAGCAGCGTTCTTCGTTTCT+AGG | - | chr1_3:71001864-71001883 | Msa0138220:intron | 45.0% | |
| AGCAGCGTTCTTCGTTTCTA+GGG | - | chr1_3:71001865-71001884 | Msa0138220:intron | 45.0% | |
| TCTCCTCTTTCTCCAAAGAG+CGG | - | chr1_3:71001902-71001921 | Msa0138220:intron | 45.0% | |
| ATCCTTCATGGACATCCAAG+GGG | + | chr1_3:71002224-71002243 | None:intergenic | 45.0% | |
| GCCTCGTTAAAAACCTTACC+AGG | - | chr1_3:71002337-71002356 | Msa0138220:intron | 45.0% | |
| ACCTTACCAGGAAAACCCAA+TGG | - | chr1_3:71002349-71002368 | Msa0138220:intron | 45.0% | |
| CCTTACCAGGAAAACCCAAT+GGG | - | chr1_3:71002350-71002369 | Msa0138220:intron | 45.0% | |
| GCGCGAAAAGGGAATTAGAA+TGG | + | chr1_3:71003350-71003369 | None:intergenic | 45.0% | |
| ! | GTATGGTTTTTCGCGCGAAA+AGG | + | chr1_3:71003362-71003381 | None:intergenic | 45.0% |
| TCAAACTCGCTTTGCAAAGC+TGG | + | chr1_3:71003436-71003455 | None:intergenic | 45.0% | |
| ! | AGTCAACGTCGACGTGTTTT+TGG | + | chr1_3:71003572-71003591 | None:intergenic | 45.0% |
| !! | CGTCGACGTTGACTTCATTT+AGG | - | chr1_3:71003578-71003597 | Msa0138220:intron | 45.0% |
| CATTCTTTACGCGATCCTTC+AGG | - | chr1_3:71003966-71003985 | Msa0138220:intron | 45.0% | |
| ACGATGCTTTACCGAAGTGA+TGG | + | chr1_3:71005242-71005261 | None:intergenic | 45.0% | |
| GCACAAGATCAAAGGAGAAG+AGG | - | chr1_3:70999078-70999097 | Msa0138220:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr1_3:71005966-71005985 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr1_3:71005966-71005985 | None:intergenic | 45.0% | |
| TCATCACATAACTGGGGTCA+GGG | + | chr1_3:71005657-71005676 | None:intergenic | 45.0% | |
| ATCATCACATAACTGGGGTC+AGG | + | chr1_3:71005658-71005677 | None:intergenic | 45.0% | |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr1_3:71006053-71006072 | None:intergenic | 45.0% |
| TCTTTGGTCGTCGTAACGTA+AGG | - | chr1_3:71006247-71006266 | Msa0138220:intron | 45.0% | |
| AGTGTCTCGAATTCGACCTA+TGG | + | chr1_3:71006465-71006484 | None:intergenic | 45.0% | |
| ACACAACGAACTTCACTGCT+TGG | + | chr1_3:71006843-71006862 | None:intergenic | 45.0% | |
| !! | ATGTACCTAATGGTGCCACT+AGG | + | chr1_3:71006906-71006925 | None:intergenic | 45.0% |
| ATCACACCCAATCAACACCT+TGG | + | chr1_3:71007003-71007022 | None:intergenic | 45.0% | |
| !! | AAGGTGTTGATTGGGTGTGA+TGG | - | chr1_3:71007002-71007021 | Msa0138220:intron | 45.0% |
| ! | GTGTGATGGAGTAAACTCTG+TGG | - | chr1_3:71007016-71007035 | Msa0138220:intron | 45.0% |
| TGATGGAGTAAACTCTGTGG+TGG | - | chr1_3:71007019-71007038 | Msa0138220:intron | 45.0% | |
| TAAACTCTGTGGTGGCAAAG+TGG | - | chr1_3:71007027-71007046 | Msa0138220:intron | 45.0% | |
| TTCAAAGAGGCCTCTAACAC+AGG | - | chr1_3:71007056-71007075 | Msa0138220:intron | 45.0% | |
| TCAAAGAGGCCTCTAACACA+GGG | - | chr1_3:71007057-71007076 | Msa0138220:intron | 45.0% | |
| TGCATATCTCCCTGTGTTAG+AGG | + | chr1_3:71007069-71007088 | None:intergenic | 45.0% | |
| !! | CATTGGTTCAAGCTTGTGAG+TGG | + | chr1_3:71007117-71007136 | None:intergenic | 45.0% |
| !!! | TGGCAAAGGTTTTAGAGCTG+GGG | - | chr1_3:71007151-71007170 | Msa0138220:intron | 45.0% |
| ACATGGACTCCTATTAGCCA+AGG | - | chr1_3:71007212-71007231 | Msa0138220:intron | 45.0% | |
| ACATCCTTGGGAGCTTATGA+TGG | - | chr1_3:71007611-71007630 | Msa0138220:intron | 45.0% | |
| CATCCTTGGGAGCTTATGAT+GGG | - | chr1_3:71007612-71007631 | Msa0138220:intron | 45.0% | |
| TTTCCCATCATAAGCTCCCA+AGG | + | chr1_3:71007618-71007637 | None:intergenic | 45.0% | |
| ! | GACCAAGATCAGGTGTCATA+GGG | + | chr1_3:71007683-71007702 | None:intergenic | 45.0% |
| ! | TGACCAAGATCAGGTGTCAT+AGG | + | chr1_3:71007684-71007703 | None:intergenic | 45.0% |
| ATGACACCTGATCTTGGTCA+AGG | - | chr1_3:71007684-71007703 | Msa0138220:CDS | 45.0% | |
| TGACACCTGATCTTGGTCAA+GGG | - | chr1_3:71007685-71007704 | Msa0138220:CDS | 45.0% | |
| !! | GGTGTTGTGCTTTAGAGGAT+GGG | - | chr1_3:70997154-70997173 | Msa0138220:intron | 45.0% |
| !! | GTGTTGTGCTTTAGAGGATG+GGG | - | chr1_3:70997155-70997174 | Msa0138220:intron | 45.0% |
| TGGTTTCTTGGAAAAGGCCT+CGG | + | chr1_3:71007757-71007776 | None:intergenic | 45.0% | |
| ! | GGCCTTTTCCAAGAAACCAA+AGG | - | chr1_3:71007758-71007777 | Msa0138220:CDS | 45.0% |
| !!! | ATTTATTCTTTTTTTTAATT+AGG | + | chr1_3:70997799-70997818 | None:intergenic | 5.0% |
| !! | TAACTATTTAAATTAATATA+TGG | + | chr1_3:70998126-70998145 | None:intergenic | 5.0% |
| !! | TATATTAATTTAAATAGTTA+TGG | - | chr1_3:70998126-70998145 | Msa0138220:intron | 5.0% |
| !!! | TTATAAGTAATTTTTTTTAT+AGG | - | chr1_3:71001272-71001291 | Msa0138220:intron | 5.0% |
| !!! | TATAAGTAATTTTTTTTATA+GGG | - | chr1_3:71001273-71001292 | Msa0138220:intron | 5.0% |
| !!! | AAAAAAAAAATTATAGTTTT+TGG | + | chr1_3:71005885-71005904 | None:intergenic | 5.0% |
| !! | AGTGCCACTTGGAAGCTCAT+TGG | + | chr1_3:70995452-70995471 | None:intergenic | 50.0% |
| GTCTTCAACCCTTCCTTAGG+AGG | - | chr1_3:70995621-70995640 | Msa0138220:CDS | 50.0% | |
| TTCAACCCTTCCTTAGGAGG+TGG | - | chr1_3:70995624-70995643 | Msa0138220:CDS | 50.0% | |
| TCAACCCTTCCTTAGGAGGT+GGG | - | chr1_3:70995625-70995644 | Msa0138220:CDS | 50.0% | |
| TGGAGATGCTTTGCACCCTA+TGG | - | chr1_3:70997110-70997129 | Msa0138220:intron | 50.0% | |
| GGCACCTTATCTTGCACAAG+GGG | - | chr1_3:70997131-70997150 | Msa0138220:intron | 50.0% | |
| GCACCTTATCTTGCACAAGG+GGG | - | chr1_3:70997132-70997151 | Msa0138220:intron | 50.0% | |
| CACCTTATCTTGCACAAGGG+GGG | - | chr1_3:70997133-70997152 | Msa0138220:intron | 50.0% | |
| !! | GGGTGTTGTGCTTTAGAGGA+TGG | - | chr1_3:70997153-70997172 | Msa0138220:intron | 50.0% |
| !! | TTGTGCTTTAGAGGATGGGG+TGG | - | chr1_3:70997158-70997177 | Msa0138220:intron | 50.0% |
| !!! | AGGATGGGGTGGTTTTAGCA+AGG | - | chr1_3:70997169-70997188 | Msa0138220:intron | 50.0% |
| !!! | GTGGTTTTAGCAAGGTGCCT+AGG | - | chr1_3:70997177-70997196 | Msa0138220:intron | 50.0% |
| ! | TTTAGCAAGGTGCCTAGGTG+AGG | - | chr1_3:70997182-70997201 | Msa0138220:intron | 50.0% |
| CGACACGCCATACGTCATTT+AGG | + | chr1_3:70997906-70997925 | None:intergenic | 50.0% | |
| ATTGTGGGAGCTGGAATTGC+TGG | - | chr1_3:70998175-70998194 | Msa0138220:intron | 50.0% | |
| GGAAAATGCTTGGAAGGCCT+TGG | - | chr1_3:70998598-70998617 | Msa0138220:intron | 50.0% | |
| TGGAAGGCCTTGGATGTTGT+TGG | - | chr1_3:70998608-70998627 | Msa0138220:intron | 50.0% | |
| GCCTTGGATGTTGTTGGTGT+TGG | - | chr1_3:70998614-70998633 | Msa0138220:intron | 50.0% | |
| !! | GCTGCATATGTTGATGGCGA+AGG | + | chr1_3:70998646-70998665 | None:intergenic | 50.0% |
| GCACCTAAGACACACTTGTG+AGG | - | chr1_3:70999604-70999623 | Msa0138220:intron | 50.0% | |
| ! | TGGGTAACTTGCAGGTAACC+AGG | + | chr1_3:70999654-70999673 | None:intergenic | 50.0% |
| ATTTCCAAGCAGATGGGGTG+AGG | - | chr1_3:70999687-70999706 | Msa0138220:intron | 50.0% | |
| TTGCTCAACCACGACGATGA+GGG | + | chr1_3:71000068-71000087 | None:intergenic | 50.0% | |
| TTTGCTCAACCACGACGATG+AGG | + | chr1_3:71000069-71000088 | None:intergenic | 50.0% | |
| GAGCAAAAGCTCCATCATCG+TGG | - | chr1_3:71000100-71000119 | Msa0138220:intron | 50.0% | |
| GTGGTTGAGCAAAAGCTCCA+GGG | - | chr1_3:71000076-71000095 | Msa0138220:intron | 50.0% | |
| ! | AGACCGCTCTTTGGAGAAAG+AGG | + | chr1_3:71001908-71001927 | None:intergenic | 50.0% |
| TCCTTCATGGACATCCAAGG+GGG | + | chr1_3:71002223-71002242 | None:intergenic | 50.0% | |
| ! | CCCATTGGGTTTTCCTGGTA+AGG | + | chr1_3:71002353-71002372 | None:intergenic | 50.0% |
| CATCACATAACTGGGGTCAG+GGG | + | chr1_3:71005656-71005675 | None:intergenic | 50.0% | |
| CTTGCCAATGAGCTTCCTAG+TGG | - | chr1_3:71006888-71006907 | Msa0138220:intron | 50.0% | |
| AGCTTCCTAGTGGCACCATT+AGG | - | chr1_3:71006898-71006917 | Msa0138220:intron | 50.0% | |
| TCTGTGGTGGCAAAGTGGTT+AGG | - | chr1_3:71007032-71007051 | Msa0138220:intron | 50.0% | |
| ACAGGGAGATATGCAACCAG+AGG | - | chr1_3:71007074-71007093 | Msa0138220:intron | 50.0% | |
| CACCCTATGACACCTGATCT+TGG | - | chr1_3:71007678-71007697 | Msa0138220:CDS | 50.0% | |
| GACACCTGATCTTGGTCAAG+GGG | - | chr1_3:71007686-71007705 | Msa0138220:CDS | 50.0% | |
| ACACCTGATCTTGGTCAAGG+GGG | - | chr1_3:71007687-71007706 | Msa0138220:CDS | 50.0% | |
| !! | GGGTGTTGTGCTTTAGAGGA+TGG | - | chr1_3:70997153-70997172 | Msa0138220:intron | 50.0% |
| !! | TTGTGCTTTAGAGGATGGGG+TGG | - | chr1_3:70997158-70997177 | Msa0138220:intron | 50.0% |
| !!! | AGGATGGGGTGGTTTTAGCA+AGG | - | chr1_3:70997169-70997188 | Msa0138220:intron | 50.0% |
| ! | TTTAGCAAGGTGCTTAGCCG+AGG | - | chr1_3:71007737-71007756 | Msa0138220:CDS | 50.0% |
| CAACCCTTCCTTAGGAGGTG+GGG | - | chr1_3:70995626-70995645 | Msa0138220:CDS | 55.0% | |
| TCTCCCCACCTCCTAAGGAA+GGG | + | chr1_3:70995632-70995651 | None:intergenic | 55.0% | |
| ATCACTCTCCCCACCTCCTA+AGG | + | chr1_3:70995637-70995656 | None:intergenic | 55.0% | |
| AAGTGGAGCCGGATTAAGGC+AGG | - | chr1_3:70995900-70995919 | Msa0138220:intron | 55.0% | |
| AGTGGAGCCGGATTAAGGCA+GGG | - | chr1_3:70995901-70995920 | Msa0138220:intron | 55.0% | |
| CACCCCCCTTGTGCAAGATA+AGG | + | chr1_3:70997138-70997157 | None:intergenic | 55.0% | |
| !! | AGGGGGGTGTTGTGCTTTAG+AGG | - | chr1_3:70997149-70997168 | Msa0138220:intron | 55.0% |
| TGCAACCGCCTCTTCTGTTC+TGG | + | chr1_3:70998892-70998911 | None:intergenic | 55.0% | |
| !! | GGATTAGTTGCGGTCGTGAG+TGG | + | chr1_3:70999633-70999652 | None:intergenic | 55.0% |
| CTCACGACCGCAACTAATCC+TGG | - | chr1_3:70999633-70999652 | Msa0138220:intron | 55.0% | |
| GAAACCTCACCCCATCTGCT+TGG | + | chr1_3:70999694-70999713 | None:intergenic | 55.0% | |
| CGTGGTTGAGCAAAAGCTCC+AGG | - | chr1_3:71000075-71000094 | Msa0138220:intron | 55.0% | |
| ATAGATGAGGGCTCATGCCC+TGG | + | chr1_3:71000139-71000158 | None:intergenic | 55.0% | |
| TCCCCCTTGGATGTCCATGA+AGG | - | chr1_3:71002219-71002238 | Msa0138220:intron | 55.0% | |
| ! | TCTTCGAGTGTGCGGACTAC+AGG | - | chr1_3:71003401-71003420 | Msa0138220:intron | 55.0% |
| !! | GGTGCCACTAGGAAGCTCAT+TGG | + | chr1_3:71006895-71006914 | None:intergenic | 55.0% |
| GGGCTCTTCCATGTGATGAG+AGG | - | chr1_3:71007171-71007190 | Msa0138220:intron | 55.0% | |
| CACCTGATCTTGGTCAAGGG+GGG | - | chr1_3:71007688-71007707 | Msa0138220:CDS | 55.0% | |
| !! | AGGGGGGTGTTGTGCTTTAG+AGG | - | chr1_3:70997149-70997168 | Msa0138220:intron | 55.0% |
| TCACAGGCTCCTCCACTGCA+TGG | + | chr1_3:70995388-70995407 | None:intergenic | 60.0% | |
| CTCTCCCCACCTCCTAAGGA+AGG | + | chr1_3:70995633-70995652 | None:intergenic | 60.0% | |
| GGCATAAGCCCTCATCGTCG+TGG | - | chr1_3:71000015-71000034 | Msa0138220:intron | 60.0% | |
| CACCCCCCTTGACCAAGATC+AGG | + | chr1_3:71007693-71007712 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 70995189 | 71007995 | 70995189 | ID=Msa0138220;Name=Msa0138220 |
| chr1_3 | mRNA | 70995189 | 71007995 | 70995189 | ID=Msa0138220-mRNA-1;Parent=Msa0138220;Name=Msa0138220-mRNA-1;_AED=0.18;_eAED=0.21;_QI=52|0.2|0|1|0.6|0.36|11|0|628 |
| chr1_3 | exon | 71007924 | 71007995 | 71007924 | ID=Msa0138220-mRNA-1:exon:24692;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 71007623 | 71007791 | 71007623 | ID=Msa0138220-mRNA-1:exon:24691;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 71006503 | 71006659 | 71006503 | ID=Msa0138220-mRNA-1:exon:24690;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 71006030 | 71006261 | 71006030 | ID=Msa0138220-mRNA-1:exon:24689;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 71005766 | 71005993 | 71005766 | ID=Msa0138220-mRNA-1:exon:24688;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 71004988 | 71005031 | 71004988 | ID=Msa0138220-mRNA-1:exon:24687;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 71004512 | 71004632 | 71004512 | ID=Msa0138220-mRNA-1:exon:24686;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 70996450 | 70996521 | 70996450 | ID=Msa0138220-mRNA-1:exon:24685;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 70996089 | 70996336 | 70996089 | ID=Msa0138220-mRNA-1:exon:24684;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 70995951 | 70996079 | 70995951 | ID=Msa0138220-mRNA-1:exon:24683;Parent=Msa0138220-mRNA-1 |
| chr1_3 | exon | 70995189 | 70995652 | 70995189 | ID=Msa0138220-mRNA-1:exon:24682;Parent=Msa0138220-mRNA-1 |
| chr1_3 | five_prime_UTR | 71007944 | 71007995 | 71007944 | ID=Msa0138220-mRNA-1:five_prime_utr;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 71007924 | 71007943 | 71007924 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 71007623 | 71007791 | 71007623 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 71006503 | 71006659 | 71006503 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 71006030 | 71006261 | 71006030 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 71005766 | 71005993 | 71005766 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 71004988 | 71005031 | 71004988 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 71004512 | 71004632 | 71004512 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 70996450 | 70996521 | 70996450 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 70996089 | 70996336 | 70996089 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 70995951 | 70996079 | 70995951 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| chr1_3 | CDS | 70995189 | 70995652 | 70995189 | ID=Msa0138220-mRNA-1:cds;Parent=Msa0138220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
