Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291620 | sp|Q8L5A7|SOT15_ARATH | 46.037 | 328 | 148 | 4 | 11 | 335 | 33 | 334 | 8.08e-105 | 314 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291620 | G7LG99 | 76.558 | 337 | 38 | 4 | 1 | 336 | 1 | 297 | 2.15e-178 | 506 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1251040 | Msa1291620 | 0.844978 | 5.406695e-59 | -8.615850e-47 |
| Msa1291620 | Msa1329990 | 0.805889 | 1.073644e-49 | -8.615850e-47 |
| Msa1193090 | Msa1291620 | 0.933240 | 2.537119e-95 | -8.615850e-47 |
| Msa1201990 | Msa1291620 | 0.809588 | 1.757316e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291620 | MtrunA17_Chr3g0091901 | 71.893 | 338 | 68 | 2 | 1 | 336 | 1 | 313 | 5.36e-180 | 501 |
| Msa1291620 | MtrunA17_Chr8g0366181 | 75.371 | 337 | 36 | 4 | 1 | 336 | 1 | 291 | 1.53e-177 | 494 |
| Msa1291620 | MtrunA17_Chr8g0366191 | 71.217 | 337 | 71 | 2 | 1 | 336 | 1 | 312 | 2.04e-176 | 492 |
| Msa1291620 | MtrunA17_Chr3g0096081 | 65.672 | 335 | 88 | 2 | 3 | 335 | 5 | 314 | 8.22e-163 | 457 |
| Msa1291620 | MtrunA17_Chr3g0081701 | 47.975 | 321 | 141 | 3 | 16 | 335 | 20 | 315 | 3.16e-107 | 317 |
| Msa1291620 | MtrunA17_Chr7g0215701 | 45.679 | 324 | 147 | 3 | 16 | 335 | 12 | 310 | 1.45e-104 | 310 |
| Msa1291620 | MtrunA17_Chr7g0215691 | 43.653 | 323 | 150 | 5 | 16 | 335 | 18 | 311 | 7.42e-97 | 290 |
| Msa1291620 | MtrunA17_Chr8g0351331 | 42.073 | 328 | 159 | 4 | 14 | 335 | 5 | 307 | 9.05e-96 | 287 |
| Msa1291620 | MtrunA17_Chr8g0353591 | 44.304 | 316 | 146 | 5 | 24 | 335 | 15 | 304 | 1.58e-95 | 286 |
| Msa1291620 | MtrunA17_Chr3g0094771 | 62.054 | 224 | 59 | 2 | 113 | 336 | 2 | 199 | 1.48e-93 | 277 |
| Msa1291620 | MtrunA17_Chr8g0353731 | 44.940 | 336 | 144 | 7 | 4 | 335 | 21 | 319 | 2.53e-92 | 279 |
| Msa1291620 | MtrunA17_Chr8g0353721 | 40.774 | 336 | 160 | 5 | 4 | 335 | 21 | 321 | 6.11e-92 | 278 |
| Msa1291620 | MtrunA17_Chr8g0366241 | 68.750 | 192 | 35 | 1 | 145 | 336 | 22 | 188 | 6.08e-90 | 268 |
| Msa1291620 | MtrunA17_Chr8g0354381 | 44.656 | 262 | 116 | 5 | 78 | 335 | 2 | 238 | 2.83e-77 | 238 |
| Msa1291620 | MtrunA17_Chr8g0340661 | 45.344 | 247 | 108 | 3 | 16 | 260 | 22 | 243 | 1.17e-73 | 228 |
| Msa1291620 | MtrunA17_Chr8g0353921 | 42.601 | 223 | 99 | 4 | 118 | 336 | 27 | 224 | 4.11e-65 | 206 |
| Msa1291620 | MtrunA17_Chr8g0353691 | 44.144 | 222 | 95 | 3 | 118 | 335 | 27 | 223 | 2.88e-64 | 204 |
| Msa1291620 | MtrunA17_Chr8g0353871 | 51.685 | 178 | 79 | 5 | 78 | 250 | 3 | 178 | 1.99e-52 | 171 |
| Msa1291620 | MtrunA17_Chr8g0353861 | 50.641 | 156 | 73 | 3 | 22 | 175 | 20 | 173 | 2.88e-47 | 159 |
| Msa1291620 | MtrunA17_Chr3g0094781 | 72.527 | 91 | 24 | 1 | 1 | 90 | 1 | 91 | 4.03e-42 | 142 |
| Msa1291620 | MtrunA17_Chr8g0366161 | 82.759 | 58 | 10 | 0 | 224 | 281 | 2 | 59 | 2.93e-26 | 99.4 |
| Msa1291620 | MtrunA17_Chr8g0353841 | 39.286 | 112 | 43 | 1 | 224 | 335 | 4 | 90 | 8.79e-22 | 88.6 |
| Msa1291620 | MtrunA17_Chr8g0353631 | 37.984 | 129 | 54 | 1 | 207 | 335 | 4 | 106 | 1.11e-21 | 89.4 |
| Msa1291620 | MtrunA17_Chr8g0366171 | 77.778 | 36 | 8 | 0 | 150 | 185 | 28 | 63 | 5.78e-15 | 68.9 |
| Msa1291620 | MtrunA17_Chr8g0353671 | 47.170 | 53 | 28 | 0 | 216 | 268 | 44 | 96 | 3.85e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291620 | AT5G07010.1 | 46.037 | 328 | 148 | 4 | 11 | 335 | 33 | 334 | 8.22e-106 | 314 |
| Msa1291620 | AT2G03760.1 | 48.182 | 330 | 138 | 4 | 8 | 335 | 4 | 302 | 3.84e-104 | 308 |
| Msa1291620 | AT2G03770.1 | 46.547 | 333 | 144 | 4 | 4 | 335 | 1 | 300 | 2.55e-103 | 306 |
| Msa1291620 | AT3G45070.3 | 49.226 | 323 | 136 | 4 | 15 | 335 | 10 | 306 | 5.55e-102 | 303 |
| Msa1291620 | AT3G45070.1 | 49.226 | 323 | 136 | 4 | 15 | 335 | 5 | 301 | 6.76e-102 | 303 |
| Msa1291620 | AT3G45070.2 | 49.226 | 323 | 136 | 4 | 15 | 335 | 37 | 333 | 1.07e-101 | 303 |
| Msa1291620 | AT5G07000.1 | 45.231 | 325 | 147 | 4 | 16 | 335 | 24 | 322 | 2.27e-97 | 292 |
| Msa1291620 | AT5G43690.1 | 45.349 | 344 | 144 | 7 | 1 | 335 | 1 | 309 | 1.34e-95 | 287 |
| Msa1291620 | AT3G45080.1 | 46.789 | 327 | 147 | 4 | 11 | 335 | 6 | 307 | 1.41e-95 | 287 |
| Msa1291620 | AT2G03750.1 | 45.509 | 334 | 154 | 4 | 3 | 335 | 22 | 328 | 2.14e-94 | 285 |
| Msa1291620 | AT1G13420.1 | 48.243 | 313 | 131 | 5 | 25 | 335 | 26 | 309 | 4.82e-92 | 278 |
| Msa1291620 | AT1G28170.1 | 47.561 | 328 | 140 | 7 | 11 | 335 | 6 | 304 | 1.54e-87 | 266 |
| Msa1291620 | AT4G26280.1 | 44.136 | 324 | 135 | 3 | 15 | 335 | 7 | 287 | 2.05e-87 | 265 |
| Msa1291620 | AT1G18590.1 | 42.857 | 315 | 149 | 6 | 25 | 335 | 34 | 321 | 1.82e-86 | 264 |
| Msa1291620 | AT1G74100.1 | 41.195 | 318 | 150 | 7 | 25 | 335 | 26 | 313 | 5.56e-84 | 258 |
| Msa1291620 | AT2G14920.1 | 44.795 | 317 | 142 | 5 | 25 | 335 | 22 | 311 | 2.42e-83 | 256 |
| Msa1291620 | AT1G74090.1 | 43.987 | 316 | 144 | 8 | 25 | 335 | 38 | 325 | 2.55e-78 | 243 |
| Msa1291620 | AT1G13430.1 | 41.867 | 332 | 146 | 5 | 25 | 336 | 26 | 330 | 1.84e-71 | 226 |
| Msa1291620 | AT2G27570.1 | 38.820 | 322 | 116 | 5 | 15 | 335 | 10 | 251 | 2.05e-68 | 215 |
Find 68 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATCAATATCAAGGATTT+TGG | 0.103784 | 8_3:-47081879 | Msa1291620:CDS |
| TCATGCTCTTGTTCCCTTCT+TGG | 0.120006 | 8_3:-47081671 | Msa1291620:CDS |
| AAAGGATGGTTCTGAATATT+TGG | 0.223698 | 8_3:+47081709 | None:intergenic |
| AAGCCAAGTGGTACCTGATT+TGG | 0.229554 | 8_3:+47081771 | None:intergenic |
| ATATCAACTCCTTGCATTCT+TGG | 0.265457 | 8_3:+47081941 | None:intergenic |
| TTTGTCTCTTTCACAGATTT+TGG | 0.271932 | 8_3:+47081553 | None:intergenic |
| TGTAGAGGAGTGAGTTCTTA+TGG | 0.275090 | 8_3:-47081406 | Msa1291620:CDS |
| TCATCATCCTGCAAGTATTT+AGG | 0.284119 | 8_3:+47081970 | None:intergenic |
| GCCCTTGGATTCTTCTTCAT+TGG | 0.290617 | 8_3:+47081240 | None:intergenic |
| TGAGTTCTTATGGACCCTTT+TGG | 0.306745 | 8_3:-47081396 | Msa1291620:CDS |
| GGGAGCATGTATTAGGATAT+TGG | 0.331818 | 8_3:-47081375 | Msa1291620:CDS |
| AGCCAAGTGGTACCTGATTT+GGG | 0.335808 | 8_3:+47081772 | None:intergenic |
| CTCTCAAAAGCCTCTTCTAA+TGG | 0.341934 | 8_3:+47081433 | None:intergenic |
| TTTATAAACATCACCTTCTC+TGG | 0.349912 | 8_3:+47081334 | None:intergenic |
| AGTGAAACAAACATGTCTTT+AGG | 0.355827 | 8_3:+47081502 | None:intergenic |
| CATAATCTTTGTCACTATAA+AGG | 0.357838 | 8_3:+47081641 | None:intergenic |
| CTAAGACGATATCTGAATCT+AGG | 0.363460 | 8_3:+47081803 | None:intergenic |
| GACACTGGATGATGTTCTTC+TGG | 0.367413 | 8_3:+47078661 | None:intergenic |
| TCTTATACCTAAATACTTGC+AGG | 0.380396 | 8_3:-47081977 | Msa1291620:CDS |
| GTCATGGACAAGTTGGAGAT+TGG | 0.403489 | 8_3:-47078619 | Msa1291620:CDS |
| GATTCTTCTTCATTGGAGAA+TGG | 0.413955 | 8_3:+47081247 | None:intergenic |
| TTAGTTACCGCTCCCAAATC+AGG | 0.417298 | 8_3:-47081784 | Msa1291620:CDS |
| TCCTAATACATGCTCCCAAA+AGG | 0.430142 | 8_3:+47081381 | None:intergenic |
| AGGATATTGGAAGGAAAGCT+TGG | 0.445940 | 8_3:-47081362 | Msa1291620:CDS |
| TTCCACACTCATCAATATCA+AGG | 0.451197 | 8_3:-47081886 | Msa1291620:CDS |
| AAGACATGTTTGTTTCACTT+TGG | 0.453802 | 8_3:-47081498 | Msa1291620:CDS |
| TGTGTGGAGAAGAGTCTTGG+AGG | 0.474226 | 8_3:+47081595 | None:intergenic |
| TATATCATCAACCATGCCCT+TGG | 0.479593 | 8_3:+47081225 | None:intergenic |
| GTTGATATCCACCTTGCCAT+TGG | 0.490567 | 8_3:-47081926 | Msa1291620:CDS |
| TGAGAACTTGAGCAACTTGG+AGG | 0.492399 | 8_3:-47081185 | Msa1291620:intron |
| TTGGAGGAGATAAAGAGTTA+AGG | 0.499984 | 8_3:+47081611 | None:intergenic |
| ATGAGTGTGGAATAAAATCC+AGG | 0.502561 | 8_3:+47081897 | None:intergenic |
| AAAAGCTTTATTATCGACAC+TGG | 0.509606 | 8_3:+47078646 | None:intergenic |
| GGAGATAAAGAGTTAAGGTC+AGG | 0.512452 | 8_3:+47081616 | None:intergenic |
| GAATATTTGGATACTTGTTG+CGG | 0.514493 | 8_3:+47081722 | None:intergenic |
| TAAGACGATATCTGAATCTA+GGG | 0.524725 | 8_3:+47081804 | None:intergenic |
| CCTAATACATGCTCCCAAAA+GGG | 0.526000 | 8_3:+47081382 | None:intergenic |
| TAAATCATCAACCATGCCGT+TGG | 0.526702 | 8_3:+47078739 | None:intergenic |
| ATAAAGGTCAATCTCCAAGA+AGG | 0.527045 | 8_3:+47081657 | None:intergenic |
| TTCATCACTTAATTCTGCCA+TGG | 0.537127 | 8_3:+47082005 | None:intergenic |
| CTCCCAAATCAGGTACCACT+TGG | 0.546400 | 8_3:-47081774 | Msa1291620:CDS |
| GGGAACAAGAGCATGAGGGT+TGG | 0.547139 | 8_3:+47081678 | None:intergenic |
| AAAGCCTCTTCTAATGGAAG+TGG | 0.551607 | 8_3:+47081439 | None:intergenic |
| CTCCAATGAAGAAGAATCCA+AGG | 0.560806 | 8_3:-47081242 | Msa1291620:CDS |
| ATATGTGTGGAGAAGAGTCT+TGG | 0.570405 | 8_3:+47081592 | None:intergenic |
| TAAAGGTCAATCTCCAAGAA+GGG | 0.586164 | 8_3:+47081658 | None:intergenic |
| AAGCTTGGAAAGGCCAGAGA+AGG | 0.595580 | 8_3:-47081347 | Msa1291620:CDS |
| TGACTTAAGCCAAGAATGCA+AGG | 0.597377 | 8_3:-47081950 | Msa1291620:CDS |
| AGGACCACTTCCATTAGAAG+AGG | 0.602220 | 8_3:-47081443 | Msa1291620:CDS |
| TGAAGAAGAATCCAAGGGCA+TGG | 0.602522 | 8_3:-47081236 | Msa1291620:CDS |
| AAGAAGGGAACAAGAGCATG+AGG | 0.605363 | 8_3:+47081673 | None:intergenic |
| ACTTTGGCATTTCTCAAACA+AGG | 0.607779 | 8_3:-47081482 | Msa1291620:CDS |
| ATCCTTGATATTGATGAGTG+TGG | 0.610454 | 8_3:+47081884 | None:intergenic |
| GAAAGAGACAAACTGTAAAG+TGG | 0.612789 | 8_3:-47081542 | Msa1291620:CDS |
| AGTCAATGCTTTAAGCCAAG+TGG | 0.615961 | 8_3:+47081759 | None:intergenic |
| AAGGTAAGAGCACAAAGTAG+AGG | 0.616375 | 8_3:-47081463 | Msa1291620:CDS |
| GGTTGGAAGTGAGCAAAGGA+TGG | 0.616548 | 8_3:+47081695 | None:intergenic |
| CAAAACATATGGAATATGTG+TGG | 0.621592 | 8_3:+47081579 | None:intergenic |
| GCATGTATTAGGATATTGGA+AGG | 0.624163 | 8_3:-47081371 | Msa1291620:CDS |
| TCTGACAAGATAAAACACCT+TGG | 0.628186 | 8_3:+47081839 | None:intergenic |
| GAAGATAAAATCCAACGGCA+TGG | 0.628917 | 8_3:-47078750 | Msa1291620:intron |
| AATCTCCAACTTGTCCATGA+CGG | 0.633961 | 8_3:+47078621 | None:intergenic |
| AGTGGTACCTGATTTGGGAG+CGG | 0.637866 | 8_3:+47081777 | None:intergenic |
| TCCAATGAAGAAGAATCCAA+GGG | 0.650057 | 8_3:-47081241 | Msa1291620:CDS |
| TGAGGGTTGGAAGTGAGCAA+AGG | 0.653409 | 8_3:+47081691 | None:intergenic |
| ATTGGAAGGAAAGCTTGGAA+AGG | 0.672349 | 8_3:-47081357 | Msa1291620:CDS |
| CTGTTGAAGATAAAATCCAA+CGG | 0.676626 | 8_3:-47078755 | Msa1291620:intron |
| AGAAGGGAACAAGAGCATGA+GGG | 0.677902 | 8_3:+47081674 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATATATTTTTAATTTT+AGG | + | chr8_3:47080696-47080715 | None:intergenic | 0.0% |
| !!! | TTTTTATTTTTTTATTTTTT+TGG | + | chr8_3:47081668-47081687 | None:intergenic | 0.0% |
| !!! | ATTTTTTTCAAATAAAAACT+AGG | + | chr8_3:47079315-47079334 | None:intergenic | 10.0% |
| !!! | GATTTTATCATATTATTTAT+AGG | - | chr8_3:47079991-47080010 | Msa1291620:intron | 10.0% |
| !! | TATAAAATAAATGTTTGATT+TGG | - | chr8_3:47080140-47080159 | Msa1291620:intron | 10.0% |
| !! | AAAAAAATAATAAAAAAGGA+AGG | - | chr8_3:47080494-47080513 | Msa1291620:intron | 10.0% |
| !!! | GTTTTTTTTTTTTTAAAACA+TGG | + | chr8_3:47081154-47081173 | None:intergenic | 10.0% |
| !!! | ATGTCATAAATTTATTTTTA+GGG | + | chr8_3:47081285-47081304 | None:intergenic | 10.0% |
| !! | TTATTTAGATTGAAAGAAAA+TGG | + | chr8_3:47079749-47079768 | None:intergenic | 15.0% |
| !! | AAATTTACTCTTTCAAAAAA+TGG | - | chr8_3:47080742-47080761 | Msa1291620:intron | 15.0% |
| !!! | CATGTCATAAATTTATTTTT+AGG | + | chr8_3:47081286-47081305 | None:intergenic | 15.0% |
| !!! | ATCTTTTTCAAATAAAAACT+AGG | + | chr8_3:47081800-47081819 | None:intergenic | 15.0% |
| !!! | AAAAAAATTGCTGAGTTTTT+GGG | - | chr8_3:47079327-47079346 | Msa1291620:intron | 20.0% |
| !! | TTTCTTTCAATCTAAATAAG+TGG | - | chr8_3:47079750-47079769 | Msa1291620:intron | 20.0% |
| !! | GAAATTACAAAAAACACAAA+AGG | + | chr8_3:47079798-47079817 | None:intergenic | 20.0% |
| !! | TACAAATTCAATCAATGATT+TGG | - | chr8_3:47079924-47079943 | Msa1291620:intron | 20.0% |
| !! | ACAAATTCAATCAATGATTT+GGG | - | chr8_3:47079925-47079944 | Msa1291620:intron | 20.0% |
| !! | ATAAAGCTTGAAATCAATTA+TGG | - | chr8_3:47080235-47080254 | Msa1291620:intron | 20.0% |
| !! | TAAAGCTTGAAATCAATTAT+GGG | - | chr8_3:47080236-47080255 | Msa1291620:intron | 20.0% |
| !!! | ATTAAACGGTTTTCATTTAT+CGG | - | chr8_3:47080392-47080411 | Msa1291620:intron | 20.0% |
| !! | GTAACGTTAAAAAAATTGAT+CGG | - | chr8_3:47081305-47081324 | Msa1291620:CDS | 20.0% |
| !! | TGCTAGTAATTTAAATGTAT+TGG | - | chr8_3:47081482-47081501 | Msa1291620:CDS | 20.0% |
| !!! | ATCTTTCCCTTATTTTTATT+TGG | - | chr8_3:47081562-47081581 | Msa1291620:CDS | 20.0% |
| !! | CATTAGCCAAATAAAAATAA+GGG | + | chr8_3:47081571-47081590 | None:intergenic | 20.0% |
| !! | TCATTAGCCAAATAAAAATA+AGG | + | chr8_3:47081572-47081591 | None:intergenic | 20.0% |
| ! | CATAATCTTTGTCACTATAA+AGG | + | chr8_3:47078963-47078982 | None:intergenic | 25.0% |
| !! | GAAAAAAATTGCTGAGTTTT+TGG | - | chr8_3:47079326-47079345 | Msa1291620:intron | 25.0% |
| !!! | ATGTTTACCCACTTTATTTT+CGG | + | chr8_3:47079562-47079581 | None:intergenic | 25.0% |
| ! | AAAATAAAGTGGGTAAACAT+GGG | - | chr8_3:47079562-47079581 | Msa1291620:intron | 25.0% |
| !!! | GTTGAGTTTTTAGATTTTTG+AGG | - | chr8_3:47079584-47079603 | Msa1291620:intron | 25.0% |
| !!! | ACTGAAGTTGATATTTCAAT+AGG | + | chr8_3:47079901-47079920 | None:intergenic | 25.0% |
| ! | AACATTGCTAAAATCGTAAA+AGG | + | chr8_3:47080072-47080091 | None:intergenic | 25.0% |
| !!! | TTTACGATTTTAGCAATGTT+TGG | - | chr8_3:47080072-47080091 | Msa1291620:intron | 25.0% |
| ! | TTTAATTGACCCATAAATGA+AGG | + | chr8_3:47080378-47080397 | None:intergenic | 25.0% |
| ! | TCATTTATGGGTCAATTAAA+CGG | - | chr8_3:47080378-47080397 | Msa1291620:intron | 25.0% |
| !! | TTAAACGGTTTTCATTTATC+GGG | - | chr8_3:47080393-47080412 | Msa1291620:intron | 25.0% |
| !!! | TTGACCTTTAGGTTTTATTT+GGG | + | chr8_3:47080837-47080856 | None:intergenic | 25.0% |
| !!! | TTTGACCTTTAGGTTTTATT+TGG | + | chr8_3:47080838-47080857 | None:intergenic | 25.0% |
| ! | AATATAAAATCCCTTCAATC+TGG | - | chr8_3:47080974-47080993 | Msa1291620:intron | 25.0% |
| ! | ATTATACTTGTACTCACATA+TGG | + | chr8_3:47081045-47081064 | None:intergenic | 25.0% |
| ! | TGAAAATGAACAAGTAGAAA+TGG | - | chr8_3:47081233-47081252 | Msa1291620:CDS | 25.0% |
| ! | GAAAATGAACAAGTAGAAAT+GGG | - | chr8_3:47081234-47081253 | Msa1291620:CDS | 25.0% |
| ! | GGTTAAACTATGCAAAATTT+AGG | - | chr8_3:47081326-47081345 | Msa1291620:CDS | 25.0% |
| !!! | TTCACTTTTAGTCTTCTAAT+TGG | - | chr8_3:47081427-47081446 | Msa1291620:CDS | 25.0% |
| !!! | AATTGGTTTTTGTGTAACTT+TGG | - | chr8_3:47081444-47081463 | Msa1291620:CDS | 25.0% |
| !! | AAAAAGATTGCTGAGTTTTT+GGG | - | chr8_3:47081812-47081831 | Msa1291620:CDS | 25.0% |
| TCTTATACCTAAATACTTGC+AGG | - | chr8_3:47078624-47078643 | Msa1291620:CDS | 30.0% | |
| ! | CTCATCAATATCAAGGATTT+TGG | - | chr8_3:47078722-47078741 | Msa1291620:CDS | 30.0% |
| TAAGACGATATCTGAATCTA+GGG | + | chr8_3:47078800-47078819 | None:intergenic | 30.0% | |
| ! | GAATATTTGGATACTTGTTG+CGG | + | chr8_3:47078882-47078901 | None:intergenic | 30.0% |
| !! | AAAGGATGGTTCTGAATATT+TGG | + | chr8_3:47078895-47078914 | None:intergenic | 30.0% |
| CAAAACATATGGAATATGTG+TGG | + | chr8_3:47079025-47079044 | None:intergenic | 30.0% | |
| !! | GATTTTGGCAACAAAACATA+TGG | + | chr8_3:47079036-47079055 | None:intergenic | 30.0% |
| ! | TTTGTCTCTTTCACAGATTT+TGG | + | chr8_3:47079051-47079070 | None:intergenic | 30.0% |
| AGTGAAACAAACATGTCTTT+AGG | + | chr8_3:47079102-47079121 | None:intergenic | 30.0% | |
| AAGACATGTTTGTTTCACTT+TGG | - | chr8_3:47079103-47079122 | Msa1291620:intron | 30.0% | |
| TTTATAAACATCACCTTCTC+TGG | + | chr8_3:47079270-47079289 | None:intergenic | 30.0% | |
| !!! | AATAAAGCTTTTTTTCGCTG+TGG | - | chr8_3:47079474-47079493 | Msa1291620:intron | 30.0% |
| ACTATCACCGAAAATAAAGT+GGG | - | chr8_3:47079552-47079571 | Msa1291620:intron | 30.0% | |
| GAAAATAAAGTGGGTAAACA+TGG | - | chr8_3:47079561-47079580 | Msa1291620:intron | 30.0% | |
| CAAGTCTAAGAATAACATTC+TGG | - | chr8_3:47079616-47079635 | Msa1291620:intron | 30.0% | |
| TCGTTGTATGCTATTAACTT+GGG | - | chr8_3:47080021-47080040 | Msa1291620:intron | 30.0% | |
| !!! | GCAGACAGTTTTTGTTTTTT+TGG | + | chr8_3:47080210-47080229 | None:intergenic | 30.0% |
| ! | CTTTGTTTGTGAGTTTGTAA+GGG | - | chr8_3:47080448-47080467 | Msa1291620:intron | 30.0% |
| TAGATGACAATGAGAGAAAA+AGG | - | chr8_3:47080532-47080551 | Msa1291620:intron | 30.0% | |
| ! | ACAATGAGAGAAAAAGGTTT+TGG | - | chr8_3:47080538-47080557 | Msa1291620:intron | 30.0% |
| ! | CAATGAGAGAAAAAGGTTTT+GGG | - | chr8_3:47080539-47080558 | Msa1291620:intron | 30.0% |
| ! | AATGAGAGAAAAAGGTTTTG+GGG | - | chr8_3:47080540-47080559 | Msa1291620:intron | 30.0% |
| !!! | ATTTTTGAGTTCCTCAAATG+AGG | + | chr8_3:47080595-47080614 | None:intergenic | 30.0% |
| GAGGAACTCAAAAATTGTAT+TGG | - | chr8_3:47080600-47080619 | Msa1291620:intron | 30.0% | |
| GAACTCAAAAATTGTATTGG+AGG | - | chr8_3:47080603-47080622 | Msa1291620:intron | 30.0% | |
| !!! | TTAGGTTTTATTTGGGAGTT+TGG | + | chr8_3:47080830-47080849 | None:intergenic | 30.0% |
| AACTCCCAAATAAAACCTAA+AGG | - | chr8_3:47080830-47080849 | Msa1291620:intron | 30.0% | |
| TTTGACGTGGTTATGAAAAT+GGG | + | chr8_3:47080884-47080903 | None:intergenic | 30.0% | |
| ATTTGACGTGGTTATGAAAA+TGG | + | chr8_3:47080885-47080904 | None:intergenic | 30.0% | |
| !! | TCTACACTTGTTGTGTTTAA+AGG | - | chr8_3:47080948-47080967 | Msa1291620:intron | 30.0% |
| ACAAACAAAAATTGCCACAT+AGG | + | chr8_3:47081636-47081655 | None:intergenic | 30.0% | |
| ! | GAAAAAGATTGCTGAGTTTT+TGG | - | chr8_3:47081811-47081830 | Msa1291620:CDS | 30.0% |
| CTGTTGAAGATAAAATCCAA+CGG | - | chr8_3:47081846-47081865 | Msa1291620:CDS | 30.0% | |
| !! | AAAAGCTTTATTATCGACAC+TGG | + | chr8_3:47081958-47081977 | None:intergenic | 30.0% |
| !!! | AATAAAGCTTTTTTCCGTCA+TGG | - | chr8_3:47081966-47081985 | Msa1291620:CDS | 30.0% |
| TCATCATCCTGCAAGTATTT+AGG | + | chr8_3:47078634-47078653 | None:intergenic | 35.0% | |
| ATATCAACTCCTTGCATTCT+TGG | + | chr8_3:47078663-47078682 | None:intergenic | 35.0% | |
| !! | AAAATCCAGGCTTTTTCCAA+TGG | + | chr8_3:47078694-47078713 | None:intergenic | 35.0% |
| ATGAGTGTGGAATAAAATCC+AGG | + | chr8_3:47078707-47078726 | None:intergenic | 35.0% | |
| TTCCACACTCATCAATATCA+AGG | - | chr8_3:47078715-47078734 | Msa1291620:CDS | 35.0% | |
| ATCCTTGATATTGATGAGTG+TGG | + | chr8_3:47078720-47078739 | None:intergenic | 35.0% | |
| ATTGCCACAAAAATTCTCCA+AGG | - | chr8_3:47078745-47078764 | Msa1291620:CDS | 35.0% | |
| ! | AACACCTTGGAGAATTTTTG+TGG | + | chr8_3:47078752-47078771 | None:intergenic | 35.0% |
| TCTGACAAGATAAAACACCT+TGG | + | chr8_3:47078765-47078784 | None:intergenic | 35.0% | |
| CTAAGACGATATCTGAATCT+AGG | + | chr8_3:47078801-47078820 | None:intergenic | 35.0% | |
| TAAAGGTCAATCTCCAAGAA+GGG | + | chr8_3:47078946-47078965 | None:intergenic | 35.0% | |
| ATAAAGGTCAATCTCCAAGA+AGG | + | chr8_3:47078947-47078966 | None:intergenic | 35.0% | |
| TTGGAGGAGATAAAGAGTTA+AGG | + | chr8_3:47078993-47079012 | None:intergenic | 35.0% | |
| GAAAGAGACAAACTGTAAAG+TGG | - | chr8_3:47079059-47079078 | Msa1291620:intron | 35.0% | |
| ACTTTGGCATTTCTCAAACA+AGG | - | chr8_3:47079119-47079138 | Msa1291620:intron | 35.0% | |
| !! | GCTTTTGAGAGTTTTTGTAG+AGG | - | chr8_3:47079180-47079199 | Msa1291620:intron | 35.0% |
| GCATGTATTAGGATATTGGA+AGG | - | chr8_3:47079230-47079249 | Msa1291620:intron | 35.0% | |
| GATTCTTCTTCATTGGAGAA+TGG | + | chr8_3:47079357-47079376 | None:intergenic | 35.0% | |
| TCCAATGAAGAAGAATCCAA+GGG | - | chr8_3:47079360-47079379 | Msa1291620:intron | 35.0% | |
| !! | TTTTGAGAACTTGAGCAACT+TGG | - | chr8_3:47079413-47079432 | Msa1291620:intron | 35.0% |
| CACTATCACCGAAAATAAAG+TGG | - | chr8_3:47079551-47079570 | Msa1291620:intron | 35.0% | |
| CTTCATTCATCATCGATGAA+GGG | - | chr8_3:47079705-47079724 | Msa1291620:intron | 35.0% | |
| TCACTGAAATACCATGTTTC+CGG | + | chr8_3:47079967-47079986 | None:intergenic | 35.0% | |
| GTCGTTGTATGCTATTAACT+TGG | - | chr8_3:47080020-47080039 | Msa1291620:intron | 35.0% | |
| ! | TTTTGTGTGACTAAAGCACA+AGG | + | chr8_3:47080114-47080133 | None:intergenic | 35.0% |
| !! | TGTTTGATTTGGCTAATCCA+TGG | - | chr8_3:47080151-47080170 | Msa1291620:intron | 35.0% |
| ! | AGTTTTACCTGGATAAACCA+TGG | + | chr8_3:47080171-47080190 | None:intergenic | 35.0% |
| ! | ATTATGCAGACAGTTTTACC+TGG | + | chr8_3:47080182-47080201 | None:intergenic | 35.0% |
| TCAATTATGGGCCTATCATA+TGG | - | chr8_3:47080248-47080267 | Msa1291620:intron | 35.0% | |
| TGAAATGCGCTAGAAACATA+TGG | + | chr8_3:47080284-47080303 | None:intergenic | 35.0% | |
| !!! | TTCTAGCGCATTTCAAGTTT+TGG | - | chr8_3:47080289-47080308 | Msa1291620:intron | 35.0% |
| ! | TTTGGAAGCACATGAGAAAA+CGG | - | chr8_3:47080307-47080326 | Msa1291620:intron | 35.0% |
| GACATCTCACCTTCATTTAT+GGG | - | chr8_3:47080366-47080385 | Msa1291620:intron | 35.0% | |
| !! | GCTTTGTTTGTGAGTTTGTA+AGG | - | chr8_3:47080447-47080466 | Msa1291620:intron | 35.0% |
| TTTGTGAGTTTGTAAGGGAA+GGG | - | chr8_3:47080453-47080472 | Msa1291620:intron | 35.0% | |
| !! | ATGAGAGAAAAAGGTTTTGG+GGG | - | chr8_3:47080541-47080560 | Msa1291620:intron | 35.0% |
| TACAAAATCCTCCTCATTTG+AGG | - | chr8_3:47080581-47080600 | Msa1291620:intron | 35.0% | |
| CTCAAAAATTGTATTGGAGG+AGG | - | chr8_3:47080606-47080625 | Msa1291620:intron | 35.0% | |
| ! | ATTGTATTGGAGGAGGATTT+TGG | - | chr8_3:47080613-47080632 | Msa1291620:intron | 35.0% |
| ! | AAGAGCATAATGGAAGACTT+TGG | + | chr8_3:47080805-47080824 | None:intergenic | 35.0% |
| AGGAGAATTGTTTGACCTTT+AGG | + | chr8_3:47080848-47080867 | None:intergenic | 35.0% | |
| AAATACTCACATGTGTTGCA+TGG | - | chr8_3:47080901-47080920 | Msa1291620:intron | 35.0% | |
| GAGTATTTCACCAGATTGAA+GGG | + | chr8_3:47080987-47081006 | None:intergenic | 35.0% | |
| TGAGTATTTCACCAGATTGA+AGG | + | chr8_3:47080988-47081007 | None:intergenic | 35.0% | |
| ! | TAATACTTGGTTTGATGCAC+AGG | + | chr8_3:47081525-47081544 | None:intergenic | 35.0% |
| GCATCAAACCAAGTATTATG+AGG | - | chr8_3:47081527-47081546 | Msa1291620:CDS | 35.0% | |
| TAGGAATGCCTCATAATACT+TGG | + | chr8_3:47081538-47081557 | None:intergenic | 35.0% | |
| ! | GTATTATGAGGCATTCCTAA+CGG | - | chr8_3:47081539-47081558 | Msa1291620:CDS | 35.0% |
| AAATAAGGGAAAGATCCGTT+AGG | + | chr8_3:47081557-47081576 | None:intergenic | 35.0% | |
| TGACTTAAGCCAAGAATGCA+AGG | - | chr8_3:47078651-47078670 | Msa1291620:CDS | 40.0% | |
| ! | AGTCAATGCTTTAAGCCAAG+TGG | + | chr8_3:47078845-47078864 | None:intergenic | 40.0% |
| GGAGATAAAGAGTTAAGGTC+AGG | + | chr8_3:47078988-47079007 | None:intergenic | 40.0% | |
| ATATGTGTGGAGAAGAGTCT+TGG | + | chr8_3:47079012-47079031 | None:intergenic | 40.0% | |
| ! | AAGGTAAGAGCACAAAGTAG+AGG | - | chr8_3:47079138-47079157 | Msa1291620:intron | 40.0% |
| AAAGCCTCTTCTAATGGAAG+TGG | + | chr8_3:47079165-47079184 | None:intergenic | 40.0% | |
| CTCTCAAAAGCCTCTTCTAA+TGG | + | chr8_3:47079171-47079190 | None:intergenic | 40.0% | |
| TGTAGAGGAGTGAGTTCTTA+TGG | - | chr8_3:47079195-47079214 | Msa1291620:intron | 40.0% | |
| ! | TGAGTTCTTATGGACCCTTT+TGG | - | chr8_3:47079205-47079224 | Msa1291620:intron | 40.0% |
| ! | GAGTTCTTATGGACCCTTTT+GGG | - | chr8_3:47079206-47079225 | Msa1291620:intron | 40.0% |
| CCTAATACATGCTCCCAAAA+GGG | + | chr8_3:47079222-47079241 | None:intergenic | 40.0% | |
| TCCTAATACATGCTCCCAAA+AGG | + | chr8_3:47079223-47079242 | None:intergenic | 40.0% | |
| ! | GGGAGCATGTATTAGGATAT+TGG | - | chr8_3:47079226-47079245 | Msa1291620:intron | 40.0% |
| AGGATATTGGAAGGAAAGCT+TGG | - | chr8_3:47079239-47079258 | Msa1291620:intron | 40.0% | |
| ATTGGAAGGAAAGCTTGGAA+AGG | - | chr8_3:47079244-47079263 | Msa1291620:intron | 40.0% | |
| CTCCAATGAAGAAGAATCCA+AGG | - | chr8_3:47079359-47079378 | Msa1291620:intron | 40.0% | |
| TATATCATCAACCATGCCCT+TGG | + | chr8_3:47079379-47079398 | None:intergenic | 40.0% | |
| CGATCATTTCAGTTGTGAGA+AGG | + | chr8_3:47079521-47079540 | None:intergenic | 40.0% | |
| ! | CATTCTGGAGACTAAACAGT+CGG | - | chr8_3:47079631-47079650 | Msa1291620:intron | 40.0% |
| GAATGAAGGAGAAAGAAAGC+TGG | + | chr8_3:47079693-47079712 | None:intergenic | 40.0% | |
| CCTTCATCGATGATGAATGA+AGG | + | chr8_3:47079707-47079726 | None:intergenic | 40.0% | |
| CCTTCATTCATCATCGATGA+AGG | - | chr8_3:47079704-47079723 | Msa1291620:intron | 40.0% | |
| ! | GATGCTCTAGACCATATGAT+AGG | + | chr8_3:47080262-47080281 | None:intergenic | 40.0% |
| CATCGATAAAGCGACACATT+TGG | + | chr8_3:47080343-47080362 | None:intergenic | 40.0% | |
| CGACATCTCACCTTCATTTA+TGG | - | chr8_3:47080365-47080384 | Msa1291620:intron | 40.0% | |
| ATCGGGTTATCTCGAGAAAA+CGG | - | chr8_3:47080410-47080429 | Msa1291620:intron | 40.0% | |
| ! | CTCACAAACAAAGCTTTAGC+TGG | + | chr8_3:47080441-47080460 | None:intergenic | 40.0% |
| GTTTGTGAGTTTGTAAGGGA+AGG | - | chr8_3:47080452-47080471 | Msa1291620:intron | 40.0% | |
| ! | ATAAAAAAGGAAGGAGCGCA+TGG | - | chr8_3:47080503-47080522 | Msa1291620:intron | 40.0% |
| ! | TTTGAGTTCCTCAAATGAGG+AGG | + | chr8_3:47080592-47080611 | None:intergenic | 40.0% |
| !! | AGGAGGATTTTGGAGAGTTT+TGG | - | chr8_3:47080623-47080642 | Msa1291620:intron | 40.0% |
| !! | AGGATTTTGGAGAGTTTTGG+AGG | - | chr8_3:47080626-47080645 | Msa1291620:intron | 40.0% |
| !!! | GGATTTTGGAGAGTTTTGGA+GGG | - | chr8_3:47080627-47080646 | Msa1291620:intron | 40.0% |
| ! | CTTTGGAGGGTTGGAAATAT+AGG | + | chr8_3:47080788-47080807 | None:intergenic | 40.0% |
| ! | GCATAATGGAAGACTTTGGA+GGG | + | chr8_3:47080801-47080820 | None:intergenic | 40.0% |
| ! | AGCATAATGGAAGACTTTGG+AGG | + | chr8_3:47080802-47080821 | None:intergenic | 40.0% |
| ! | GAGTTTGGAGAAGAGCATAA+TGG | + | chr8_3:47080815-47080834 | None:intergenic | 40.0% |
| !! | AAATGGGAAGACTAGTCTAG+AGG | + | chr8_3:47080868-47080887 | None:intergenic | 40.0% |
| ACACATGTGAGTATTTGACG+TGG | + | chr8_3:47080897-47080916 | None:intergenic | 40.0% | |
| CATGGCTGAAGTAGATAGAA+TGG | + | chr8_3:47081136-47081155 | None:intergenic | 40.0% | |
| AGAAGGGTGGATGGATAAAA+GGG | + | chr8_3:47081606-47081625 | None:intergenic | 40.0% | |
| TAGAAGGGTGGATGGATAAA+AGG | + | chr8_3:47081607-47081626 | None:intergenic | 40.0% | |
| AAAAATTGCCACATAGGCAG+TGG | + | chr8_3:47081630-47081649 | None:intergenic | 40.0% | |
| !! | TTGATTTGGACAAGATGGGT+TGG | + | chr8_3:47081734-47081753 | None:intergenic | 40.0% |
| ACCCATCTTGTCCAAATCAA+AGG | - | chr8_3:47081734-47081753 | Msa1291620:CDS | 40.0% | |
| !! | CCCTTTGATTTGGACAAGAT+GGG | + | chr8_3:47081738-47081757 | None:intergenic | 40.0% |
| CCCATCTTGTCCAAATCAAA+GGG | - | chr8_3:47081735-47081754 | Msa1291620:CDS | 40.0% | |
| !! | TCCCTTTGATTTGGACAAGA+TGG | + | chr8_3:47081739-47081758 | None:intergenic | 40.0% |
| AAGTTGCTCTCCCTTTGATT+TGG | + | chr8_3:47081748-47081767 | None:intergenic | 40.0% | |
| AAGGGAGAGCAACTTAATTG+TGG | - | chr8_3:47081753-47081772 | Msa1291620:CDS | 40.0% | |
| AGGGAGAGCAACTTAATTGT+GGG | - | chr8_3:47081754-47081773 | Msa1291620:CDS | 40.0% | |
| !!! | TTGCTGAGTTTTTGGGTTGT+TGG | - | chr8_3:47081819-47081838 | Msa1291620:CDS | 40.0% |
| GAAGATAAAATCCAACGGCA+TGG | - | chr8_3:47081851-47081870 | Msa1291620:CDS | 40.0% | |
| TAAATCATCAACCATGCCGT+TGG | + | chr8_3:47081865-47081884 | None:intergenic | 40.0% | |
| !! | TTTTGAGAAGCTGAGCAACT+TGG | - | chr8_3:47081899-47081918 | Msa1291620:CDS | 40.0% |
| ! | TTTTTCCGTCATGGACAAGT+TGG | - | chr8_3:47081975-47081994 | Msa1291620:CDS | 40.0% |
| AATCTCCAACTTGTCCATGA+CGG | + | chr8_3:47081983-47082002 | None:intergenic | 40.0% | |
| GTTGATATCCACCTTGCCAT+TGG | - | chr8_3:47078675-47078694 | Msa1291620:CDS | 45.0% | |
| TTAGTTACCGCTCCCAAATC+AGG | - | chr8_3:47078817-47078836 | Msa1291620:intron | 45.0% | |
| AGCCAAGTGGTACCTGATTT+GGG | + | chr8_3:47078832-47078851 | None:intergenic | 45.0% | |
| AAGCCAAGTGGTACCTGATT+TGG | + | chr8_3:47078833-47078852 | None:intergenic | 45.0% | |
| ! | AGAAGGGAACAAGAGCATGA+GGG | + | chr8_3:47078930-47078949 | None:intergenic | 45.0% |
| ! | AAGAAGGGAACAAGAGCATG+AGG | + | chr8_3:47078931-47078950 | None:intergenic | 45.0% |
| TCATGCTCTTGTTCCCTTCT+TGG | - | chr8_3:47078930-47078949 | Msa1291620:intron | 45.0% | |
| AGGACCACTTCCATTAGAAG+AGG | - | chr8_3:47079158-47079177 | Msa1291620:intron | 45.0% | |
| !! | CCCTTTTGGGAGCATGTATT+AGG | - | chr8_3:47079219-47079238 | Msa1291620:intron | 45.0% |
| GCCCTTGGATTCTTCTTCAT+TGG | + | chr8_3:47079364-47079383 | None:intergenic | 45.0% | |
| TGAAGAAGAATCCAAGGGCA+TGG | - | chr8_3:47079365-47079384 | Msa1291620:intron | 45.0% | |
| TGAGAACTTGAGCAACTTGG+AGG | - | chr8_3:47079416-47079435 | Msa1291620:intron | 45.0% | |
| AACTTGGAGGTCAACAAGAC+CGG | - | chr8_3:47079429-47079448 | Msa1291620:intron | 45.0% | |
| AACACCTGTTGCTACTCTTC+CGG | + | chr8_3:47079451-47079470 | None:intergenic | 45.0% | |
| !!! | TTTTTTCGCTGTGGCCAAGT+CGG | - | chr8_3:47079483-47079502 | Msa1291620:intron | 45.0% |
| ! | GGTTTTTCCAATCTCCGACT+TGG | + | chr8_3:47079500-47079519 | None:intergenic | 45.0% |
| CATTCATCATCGATGAAGGG+TGG | - | chr8_3:47079708-47079727 | Msa1291620:intron | 45.0% | |
| ! | CATCGATGAAGGGTGGTTTT+AGG | - | chr8_3:47079715-47079734 | Msa1291620:intron | 45.0% |
| GGCTAATCCATGGTTTATCC+AGG | - | chr8_3:47080161-47080180 | Msa1291620:intron | 45.0% | |
| ! | AATGGAAGACTTTGGAGGGT+TGG | + | chr8_3:47080797-47080816 | None:intergenic | 45.0% |
| TCGATCCAGCATGTTTCCAA+TGG | - | chr8_3:47081349-47081368 | Msa1291620:CDS | 45.0% | |
| CGATCCAGCATGTTTCCAAT+GGG | - | chr8_3:47081350-47081369 | Msa1291620:CDS | 45.0% | |
| GCACATGGTGCATGTGAATA+TGG | - | chr8_3:47081389-47081408 | Msa1291620:CDS | 45.0% | |
| !! | ATGGATAAAAGGGGTGTCGA+TGG | + | chr8_3:47081596-47081615 | None:intergenic | 45.0% |
| GAAGGGTGGATGGATAAAAG+GGG | + | chr8_3:47081605-47081624 | None:intergenic | 45.0% | |
| GGGAGAGCAACTTAATTGTG+GGG | - | chr8_3:47081755-47081774 | Msa1291620:CDS | 45.0% | |
| GACACTGGATGATGTTCTTC+TGG | + | chr8_3:47081943-47081962 | None:intergenic | 45.0% | |
| ! | GTCATGGACAAGTTGGAGAT+TGG | - | chr8_3:47081982-47082001 | Msa1291620:CDS | 45.0% |
| !! | TGAAAAAAAAATAATAAAAA+AGG | - | chr8_3:47080490-47080509 | Msa1291620:intron | 5.0% |
| !! | GGCTTTTTCCAATGGCAAGG+TGG | + | chr8_3:47078686-47078705 | None:intergenic | 50.0% |
| !! | CCAGGCTTTTTCCAATGGCA+AGG | + | chr8_3:47078689-47078708 | None:intergenic | 50.0% |
| CCTTGCCATTGGAAAAAGCC+TGG | - | chr8_3:47078686-47078705 | Msa1291620:CDS | 50.0% | |
| !! | AGTGGTACCTGATTTGGGAG+CGG | + | chr8_3:47078827-47078846 | None:intergenic | 50.0% |
| CTCCCAAATCAGGTACCACT+TGG | - | chr8_3:47078827-47078846 | Msa1291620:intron | 50.0% | |
| GGTTGGAAGTGAGCAAAGGA+TGG | + | chr8_3:47078909-47078928 | None:intergenic | 50.0% | |
| TGAGGGTTGGAAGTGAGCAA+AGG | + | chr8_3:47078913-47078932 | None:intergenic | 50.0% | |
| TGTGTGGAGAAGAGTCTTGG+AGG | + | chr8_3:47079009-47079028 | None:intergenic | 50.0% | |
| AAGCTTGGAAAGGCCAGAGA+AGG | - | chr8_3:47079254-47079273 | Msa1291620:intron | 50.0% | |
| AAGACCGGAAGAGTAGCAAC+AGG | - | chr8_3:47079444-47079463 | Msa1291620:intron | 50.0% | |
| ACGTTGCAGATCCGGAAACA+TGG | - | chr8_3:47079953-47079972 | Msa1291620:intron | 50.0% | |
| ! | GCACAAGGCTGATTCTAGCT+AGG | + | chr8_3:47080099-47080118 | None:intergenic | 50.0% |
| GTGAGTTTGTAAGGGAAGGG+AGG | - | chr8_3:47080456-47080475 | Msa1291620:intron | 50.0% | |
| CCAACCCATTGGAAACATGC+TGG | + | chr8_3:47081357-47081376 | None:intergenic | 50.0% | |
| CCAGCATGTTTCCAATGGGT+TGG | - | chr8_3:47081354-47081373 | Msa1291620:CDS | 50.0% | |
| CCACATAGGCAGTGGTAGAA+GGG | + | chr8_3:47081622-47081641 | None:intergenic | 50.0% | |
| !! | TTGGACAAGATGGGTTGGTG+AGG | + | chr8_3:47081729-47081748 | None:intergenic | 50.0% |
| ! | GGGAACAAGAGCATGAGGGT+TGG | + | chr8_3:47078926-47078945 | None:intergenic | 55.0% |
| ACTCACGTTCGCCAACCCAT+TGG | + | chr8_3:47081368-47081387 | None:intergenic | 55.0% | |
| TGGCGAACGTGAGTAGCACA+TGG | - | chr8_3:47081374-47081393 | Msa1291620:CDS | 55.0% | |
| CATAGGCAGTGGTAGAAGGG+TGG | + | chr8_3:47081619-47081638 | None:intergenic | 55.0% | |
| CCCTTCTACCACTGCCTATG+TGG | - | chr8_3:47081619-47081638 | Msa1291620:CDS | 55.0% | |
| GCCACATAGGCAGTGGTAGA+AGG | + | chr8_3:47081623-47081642 | None:intergenic | 55.0% | |
| GCTGTGGCCAAGTCGGAGAT+TGG | - | chr8_3:47079490-47079509 | Msa1291620:intron | 60.0% | |
| GGGCGTCAACGTTGCAGATC+CGG | - | chr8_3:47079945-47079964 | Msa1291620:intron | 60.0% | |
| GGCAGTGGTAGAAGGGTGGA+TGG | + | chr8_3:47081615-47081634 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 47078598 | 47082025 | 47078598 | ID=Msa1291620;Name=Msa1291620 |
| chr8_3 | mRNA | 47078598 | 47082025 | 47078598 | ID=Msa1291620-mRNA-1;Parent=Msa1291620;Name=Msa1291620-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|2|0|336 |
| chr8_3 | exon | 47081186 | 47082025 | 47081186 | ID=Msa1291620-mRNA-1:exon:13068;Parent=Msa1291620-mRNA-1 |
| chr8_3 | exon | 47078598 | 47078768 | 47078598 | ID=Msa1291620-mRNA-1:exon:13067;Parent=Msa1291620-mRNA-1 |
| chr8_3 | CDS | 47081186 | 47082025 | 47081186 | ID=Msa1291620-mRNA-1:cds;Parent=Msa1291620-mRNA-1 |
| chr8_3 | CDS | 47078598 | 47078768 | 47078598 | ID=Msa1291620-mRNA-1:cds;Parent=Msa1291620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
