Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301120 | XP_003609412.1 | 99.266 | 545 | 4 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301120 | sp|Q9LHS0|CAP10_ARATH | 67.890 | 545 | 148 | 11 | 9 | 541 | 11 | 540 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301120 | G7JFD3 | 99.266 | 545 | 4 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1125 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0706000 | Msa1301120 | 0.813160 | 2.945266e-51 | -8.615850e-47 |
| Msa0722820 | Msa1301120 | 0.809417 | 1.911582e-50 | -8.615850e-47 |
| Msa0739820 | Msa1301120 | -0.801388 | 9.217575e-49 | -8.615850e-47 |
| Msa0800490 | Msa1301120 | 0.802740 | 4.861280e-49 | -8.615850e-47 |
| Msa0167570 | Msa1301120 | -0.802492 | 5.467534e-49 | -8.615850e-47 |
| Msa0217900 | Msa1301120 | 0.818546 | 1.853141e-52 | -8.615850e-47 |
| Msa0387040 | Msa1301120 | 0.803159 | 3.981790e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301120 | MtrunA17_Chr4g0064391 | 99.266 | 545 | 4 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1125 |
| Msa1301120 | MtrunA17_Chr8g0376161 | 50.171 | 584 | 227 | 13 | 4 | 545 | 2 | 563 | 9.10e-177 | 510 |
| Msa1301120 | MtrunA17_Chr4g0071851 | 47.069 | 580 | 259 | 14 | 4 | 539 | 2 | 577 | 2.45e-156 | 459 |
| Msa1301120 | MtrunA17_Chr2g0298681 | 62.975 | 316 | 104 | 2 | 4 | 307 | 2 | 316 | 6.21e-141 | 419 |
| Msa1301120 | MtrunA17_Chr2g0305391 | 40.323 | 558 | 258 | 14 | 9 | 520 | 1 | 529 | 1.96e-123 | 373 |
| Msa1301120 | MtrunA17_Chr4g0064081 | 28.311 | 604 | 341 | 14 | 7 | 530 | 4 | 595 | 5.07e-69 | 233 |
| Msa1301120 | MtrunA17_Chr2g0278681 | 31.076 | 576 | 302 | 13 | 7 | 499 | 4 | 567 | 1.95e-67 | 229 |
| Msa1301120 | MtrunA17_Chr8g0336601 | 30.233 | 602 | 326 | 20 | 5 | 527 | 2 | 588 | 7.57e-66 | 224 |
| Msa1301120 | MtrunA17_Chr3g0119631 | 34.539 | 304 | 184 | 4 | 9 | 300 | 5 | 305 | 2.96e-59 | 211 |
| Msa1301120 | MtrunA17_Chr3g0137621 | 46.053 | 152 | 79 | 2 | 5 | 155 | 2 | 151 | 7.53e-38 | 147 |
| Msa1301120 | MtrunA17_Chr3g0137621 | 28.504 | 421 | 240 | 13 | 172 | 543 | 227 | 635 | 1.41e-25 | 111 |
| Msa1301120 | MtrunA17_Chr8g0392221 | 29.904 | 311 | 198 | 8 | 9 | 303 | 5 | 311 | 2.98e-36 | 140 |
| Msa1301120 | MtrunA17_Chr6g0476971 | 25.436 | 287 | 195 | 5 | 1 | 272 | 1 | 283 | 3.72e-24 | 104 |
| Msa1301120 | MtrunA17_Chr1g0162241 | 24.281 | 313 | 214 | 11 | 10 | 310 | 8 | 309 | 5.92e-19 | 89.0 |
| Msa1301120 | MtrunA17_Chr3g0123621 | 26.316 | 323 | 207 | 13 | 6 | 315 | 2 | 306 | 5.47e-18 | 85.5 |
| Msa1301120 | MtrunA17_Chr8g0375541 | 22.830 | 311 | 206 | 13 | 9 | 301 | 4 | 298 | 4.92e-15 | 77.0 |
| Msa1301120 | MtrunA17_Chr8g0381681 | 27.230 | 213 | 137 | 7 | 5 | 207 | 2 | 206 | 2.47e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301120 | AT5G35200.1 | 67.890 | 545 | 148 | 11 | 9 | 541 | 11 | 540 | 0.0 | 714 |
| Msa1301120 | AT5G35200.2 | 67.890 | 545 | 148 | 11 | 9 | 541 | 11 | 540 | 0.0 | 714 |
| Msa1301120 | AT2G01600.1 | 48.480 | 592 | 233 | 15 | 4 | 545 | 2 | 571 | 3.76e-165 | 481 |
| Msa1301120 | AT4G25940.1 | 50.467 | 535 | 200 | 10 | 5 | 483 | 3 | 528 | 5.13e-161 | 472 |
| Msa1301120 | AT1G14910.1 | 49.180 | 549 | 227 | 13 | 4 | 519 | 2 | 531 | 1.08e-158 | 469 |
| Msa1301120 | AT1G14910.2 | 49.708 | 513 | 205 | 12 | 4 | 483 | 2 | 494 | 6.36e-153 | 454 |
| Msa1301120 | AT5G57200.1 | 64.669 | 317 | 100 | 2 | 4 | 309 | 2 | 317 | 1.20e-144 | 429 |
| Msa1301120 | AT1G03050.1 | 32.131 | 582 | 297 | 18 | 7 | 505 | 4 | 570 | 1.56e-72 | 243 |
| Msa1301120 | AT4G02650.1 | 28.130 | 615 | 351 | 13 | 7 | 542 | 4 | 606 | 4.67e-64 | 220 |
| Msa1301120 | AT4G32285.1 | 28.843 | 579 | 314 | 8 | 8 | 492 | 4 | 578 | 7.21e-63 | 218 |
| Msa1301120 | AT4G32285.2 | 28.843 | 579 | 314 | 8 | 8 | 492 | 4 | 578 | 7.21e-63 | 218 |
| Msa1301120 | AT1G05020.1 | 31.902 | 326 | 186 | 4 | 9 | 300 | 5 | 328 | 7.44e-56 | 199 |
| Msa1301120 | AT2G25430.1 | 46.980 | 149 | 76 | 2 | 8 | 155 | 4 | 150 | 1.21e-37 | 147 |
| Msa1301120 | AT2G25430.1 | 27.195 | 353 | 223 | 4 | 172 | 492 | 247 | 597 | 2.30e-24 | 107 |
| Msa1301120 | AT1G33340.1 | 25.271 | 277 | 186 | 8 | 9 | 272 | 9 | 277 | 5.05e-19 | 89.4 |
| Msa1301120 | AT1G25240.2 | 24.916 | 297 | 202 | 7 | 10 | 298 | 6 | 289 | 1.68e-17 | 85.1 |
| Msa1301120 | AT1G25240.1 | 24.916 | 297 | 202 | 7 | 10 | 298 | 5 | 288 | 1.74e-17 | 84.7 |
| Msa1301120 | AT4G40080.1 | 30.097 | 206 | 120 | 7 | 4 | 190 | 2 | 202 | 6.05e-16 | 80.1 |
| Msa1301120 | AT1G68110.1 | 23.077 | 299 | 209 | 9 | 10 | 298 | 5 | 292 | 3.42e-14 | 74.7 |
| Msa1301120 | AT2G01920.1 | 23.052 | 308 | 184 | 11 | 10 | 303 | 9 | 277 | 3.30e-11 | 65.1 |
Find 182 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAGAACTCATTAATTA+TGG | 0.161452 | 8_3:-63050185 | Msa1301120:CDS |
| CAGCTTCTCTATCGAGTTAT+TGG | 0.162944 | 8_3:-63049618 | Msa1301120:CDS |
| CTTGGAGTCAAGATTAAATT+TGG | 0.186318 | 8_3:+63052188 | None:intergenic |
| TCAATAGCCAAAACTTCTTT+TGG | 0.225329 | 8_3:+63048456 | None:intergenic |
| AACTCCACCCTCCACTTATA+GGG | 0.244560 | 8_3:-63052310 | Msa1301120:five_prime_UTR |
| TAACTCCACCCTCCACTTAT+AGG | 0.246766 | 8_3:-63052311 | Msa1301120:five_prime_UTR |
| ATGGATTATAGCTAGCATTT+TGG | 0.247934 | 8_3:+63046849 | None:intergenic |
| TGCTGCTCCAAAAGAAGTTT+TGG | 0.257824 | 8_3:-63048463 | Msa1301120:CDS |
| CAACAATCTGCAAATCCTTT+TGG | 0.269633 | 8_3:-63046656 | Msa1301120:CDS |
| GCACGTTCCTCCTTCACTTC+TGG | 0.277152 | 8_3:+63048420 | None:intergenic |
| CGAATGTGTTTCTCCTTAGC+TGG | 0.277512 | 8_3:+63051221 | None:intergenic |
| AAAGAAAATCACGATCTATA+AGG | 0.285386 | 8_3:+63051937 | None:intergenic |
| TTCTGCAGTATCCAAATCTT+TGG | 0.315682 | 8_3:+63049668 | None:intergenic |
| ATCTTGAGCCCGGGAAAATT+AGG | 0.316070 | 8_3:-63052216 | Msa1301120:five_prime_UTR |
| TTTGGCTATTGAATACAATA+AGG | 0.318480 | 8_3:-63048445 | Msa1301120:CDS |
| ATATGCCGTAATCTTGATAT+TGG | 0.321801 | 8_3:-63049031 | Msa1301120:CDS |
| GTCACAGAGGACCAAAGATT+TGG | 0.328855 | 8_3:-63049679 | Msa1301120:intron |
| ACAACCACCACCTGATCTTT+TGG | 0.329968 | 8_3:-63048346 | Msa1301120:intron |
| TAAATAGCAGATGAGGGTTT+TGG | 0.334431 | 8_3:-63046420 | Msa1301120:three_prime_UTR |
| GAAATTTGTTCCTGATGAAT+TGG | 0.339892 | 8_3:-63046310 | Msa1301120:three_prime_UTR |
| CTAAACATTTCTTGTGGATA+AGG | 0.342435 | 8_3:-63046552 | Msa1301120:exon |
| CAGTTTCCATTCCCTGTACA+TGG | 0.355094 | 8_3:-63046278 | Msa1301120:three_prime_UTR |
| TAGTGATGGAACTGTTAATA+TGG | 0.357056 | 8_3:-63049318 | Msa1301120:CDS |
| AACTCTGCAGCAGCTGGAAC+AGG | 0.369911 | 8_3:+63048187 | None:intergenic |
| CCAGCCGGTGCTTGCTCCCA+TGG | 0.373647 | 8_3:+63046830 | None:intergenic |
| TGGAACCGCTGGGTGGGAAT+TGG | 0.379150 | 8_3:-63047458 | Msa1301120:CDS |
| AAAAGCACTTGGAGCTCTTA+AGG | 0.379703 | 8_3:-63051434 | Msa1301120:CDS |
| GAACAGAAAATTTGTATCAT+AGG | 0.383499 | 8_3:-63046484 | Msa1301120:three_prime_UTR |
| AAACATGGATACTCCGCATT+TGG | 0.384411 | 8_3:-63046523 | Msa1301120:three_prime_UTR |
| ATTAACAGTTCCATCACTAA+TGG | 0.385098 | 8_3:+63049322 | None:intergenic |
| TATGAGCTGCTTGCTTCGTT+TGG | 0.393592 | 8_3:+63052108 | None:intergenic |
| TGCTGCAGCAGCTAGCAAAT+TGG | 0.394294 | 8_3:-63047404 | Msa1301120:intron |
| ATGAAGAACTCATTAATTAT+GGG | 0.394956 | 8_3:-63050184 | Msa1301120:CDS |
| GCTGTTTCAAATCATGCAAA+TGG | 0.395050 | 8_3:-63047478 | Msa1301120:CDS |
| AGCTGGGCGTTCAACATGAT+TGG | 0.400959 | 8_3:+63051238 | None:intergenic |
| TTGGCTTTAGCCATCGTTCC+CGG | 0.405036 | 8_3:-63048148 | Msa1301120:intron |
| GATTATCAAAGACACATAAC+TGG | 0.406456 | 8_3:-63050806 | Msa1301120:CDS |
| CTTTCGAACTATTGCTCCCT+GGG | 0.408339 | 8_3:+63048829 | None:intergenic |
| AATTTCTCTCTAGCTATCTA+TGG | 0.408342 | 8_3:+63046452 | None:intergenic |
| TGCGTTAACAGTGACCAATC+AGG | 0.410368 | 8_3:+63046340 | None:intergenic |
| ATACAGAAGGGTTGGGCTGC+AGG | 0.411427 | 8_3:-63049167 | Msa1301120:intron |
| TGGTATTCAGGCTGGAGGTT+TGG | 0.422718 | 8_3:-63046921 | Msa1301120:intron |
| AACTGTTAATATGGTTGATA+AGG | 0.423678 | 8_3:-63049309 | Msa1301120:intron |
| TTCTCAGTGCATCATCATAT+AGG | 0.427987 | 8_3:+63046879 | None:intergenic |
| CGAGAGAGAGAAAAGAGAAA+AGG | 0.431372 | 8_3:+63052054 | None:intergenic |
| GGTGGTGTTTCCACTTTCAC+AGG | 0.433455 | 8_3:+63048372 | None:intergenic |
| GATACATGAAAGACTGTTGC+TGG | 0.435439 | 8_3:+63046717 | None:intergenic |
| CTATCGAGTTATTGGTTGCC+AGG | 0.437344 | 8_3:-63049610 | Msa1301120:intron |
| TGCTCCACACTCTGTTCAAA+TGG | 0.437973 | 8_3:-63046753 | Msa1301120:CDS |
| AAGAAAATCACGATCTATAA+GGG | 0.441829 | 8_3:+63051938 | None:intergenic |
| TGGAGCAGCCATTGTATTAG+AGG | 0.443445 | 8_3:+63046769 | None:intergenic |
| ATATTGCAATTAGGTTGCTT+CGG | 0.443544 | 8_3:-63049366 | Msa1301120:intron |
| AGCTGCTTGCTTCGTTTGGT+TGG | 0.445468 | 8_3:+63052112 | None:intergenic |
| TCTTCCAACTCTGCAGCAGC+TGG | 0.449921 | 8_3:+63048181 | None:intergenic |
| ACCGTCTGAACCTGTGAAAG+TGG | 0.453685 | 8_3:-63048382 | Msa1301120:CDS |
| CCTTTCGAACTATTGCTCCC+TGG | 0.454270 | 8_3:+63048828 | None:intergenic |
| ATTTATACTGAGATATGATC+TGG | 0.455267 | 8_3:+63052274 | None:intergenic |
| TGTTCCAGCTGCTGCAGAGT+TGG | 0.459187 | 8_3:-63048185 | Msa1301120:CDS |
| GTCACTGTTAACGCATTAGC+AGG | 0.463125 | 8_3:-63046332 | Msa1301120:three_prime_UTR |
| GAAGTTCATCAAAGTTGAGC+AGG | 0.463775 | 8_3:-63048999 | Msa1301120:intron |
| GAGAGAGAGAAAAGAGAAAA+GGG | 0.468088 | 8_3:+63052055 | None:intergenic |
| ACAGGTTCAGACGGTGGAGG+GGG | 0.472068 | 8_3:+63048390 | None:intergenic |
| AATCATGCAAATGGAACCGC+TGG | 0.473715 | 8_3:-63047469 | Msa1301120:CDS |
| GAAAACAATACCAATTCATC+AGG | 0.476238 | 8_3:+63046300 | None:intergenic |
| AAAATGCTAGCTATAATCCA+TGG | 0.481886 | 8_3:-63046847 | Msa1301120:CDS |
| GCAGCACTTTCATTTGAGCT+AGG | 0.489574 | 8_3:+63047421 | None:intergenic |
| TCCGCATTTGGTTGTATGCG+TGG | 0.491962 | 8_3:-63046511 | Msa1301120:three_prime_UTR |
| AATGAGTTCTTCATGAAATG+TGG | 0.492798 | 8_3:+63050193 | None:intergenic |
| AGCAATAGTTCGAAAGGATC+AGG | 0.493344 | 8_3:-63048822 | Msa1301120:intron |
| GAATGTGTTTCTCCTTAGCT+GGG | 0.493431 | 8_3:+63051222 | None:intergenic |
| CTATGTCAAAGATGCTCCCC+AGG | 0.495058 | 8_3:-63048846 | Msa1301120:CDS |
| CACGTCCAATATCAAGATTA+CGG | 0.495283 | 8_3:+63049026 | None:intergenic |
| CGAACCTAAAATCTTGAGCC+CGG | 0.496610 | 8_3:-63052226 | Msa1301120:five_prime_UTR |
| AAAGATGACTCGAGTCCAAA+TGG | 0.496856 | 8_3:-63050125 | Msa1301120:intron |
| GGACACCACTACTGTCTCAT+TGG | 0.499844 | 8_3:-63051413 | Msa1301120:CDS |
| TCACAGGTTCAGACGGTGGA+GGG | 0.500208 | 8_3:+63048388 | None:intergenic |
| TCACCGTGCTCTGAGGGAGG+TGG | 0.500344 | 8_3:-63050219 | Msa1301120:CDS |
| ACAGTTCACCCCTATGGCTC+AGG | 0.500843 | 8_3:-63046614 | Msa1301120:CDS |
| GTTTAGATGAGGCCTGTGTA+AGG | 0.501347 | 8_3:+63046569 | None:intergenic |
| ATCTTTGACATAGTCTTCCA+TGG | 0.501357 | 8_3:+63048856 | None:intergenic |
| AGATCAGGTGGTGGTTGTAC+TGG | 0.501522 | 8_3:+63048351 | None:intergenic |
| TAAGGATTGTATGATTGAAC+AGG | 0.502702 | 8_3:+63046587 | None:intergenic |
| CACAGGTTCAGACGGTGGAG+GGG | 0.502984 | 8_3:+63048389 | None:intergenic |
| ATGGCTTGCATAAACGATGA+TGG | 0.503236 | 8_3:+63048875 | None:intergenic |
| ACAGTAATTACCAAAAGATC+AGG | 0.504878 | 8_3:+63048336 | None:intergenic |
| AGCGAGAGCATGGATGCAAT+AGG | 0.506646 | 8_3:+63050833 | None:intergenic |
| TGTCATTCACCGTGCTCTGA+GGG | 0.508222 | 8_3:-63050225 | Msa1301120:CDS |
| CCATATTGAGGATTTCCAAA+AGG | 0.508316 | 8_3:+63046641 | None:intergenic |
| GGATTTGCAGATTGTTGTTG+AGG | 0.508477 | 8_3:+63046662 | None:intergenic |
| TAGAGAAGCTGTTGTAAAGC+TGG | 0.511890 | 8_3:+63049630 | None:intergenic |
| TTAAATAGAACCCCTATAAG+TGG | 0.513117 | 8_3:+63052299 | None:intergenic |
| TGGCTTGCATAAACGATGAT+GGG | 0.513219 | 8_3:+63048876 | None:intergenic |
| TTGATATATACAGAAGGGTT+GGG | 0.514045 | 8_3:-63049174 | Msa1301120:CDS |
| ATATACTTCCCACCATGTAC+AGG | 0.516614 | 8_3:+63046266 | None:intergenic |
| GGAGCCACAGTTCACCCCTA+TGG | 0.518635 | 8_3:-63046620 | Msa1301120:CDS |
| CGATCTCAGCTACAAGACCT+AGG | 0.519172 | 8_3:-63050866 | Msa1301120:CDS |
| CCGCATTTGGTTGTATGCGT+GGG | 0.522867 | 8_3:-63046510 | Msa1301120:three_prime_UTR |
| CTTGATATATACAGAAGGGT+TGG | 0.523281 | 8_3:-63049175 | Msa1301120:CDS |
| CAAATTTAATCTTGACTCCA+AGG | 0.524488 | 8_3:-63052187 | Msa1301120:five_prime_UTR |
| TGCTTCGTTTGGTTGGTCGT+CGG | 0.525049 | 8_3:+63052119 | None:intergenic |
| TAAGGTCAACAGTGGTTACA+AGG | 0.525222 | 8_3:-63051389 | Msa1301120:intron |
| GATTCAGTTAGCACTCCAAT+TGG | 0.526089 | 8_3:-63049459 | Msa1301120:intron |
| TGTGAGAGGGAGAATATGTC+TGG | 0.529556 | 8_3:-63051478 | Msa1301120:exon |
| TTCCCACCATGTACAGGGAA+TGG | 0.533479 | 8_3:+63046272 | None:intergenic |
| ATTGCATCCATGCTCTCGCT+AGG | 0.535134 | 8_3:-63050830 | Msa1301120:CDS |
| TGAACTGTGGCTCCATATTG+AGG | 0.535591 | 8_3:+63046629 | None:intergenic |
| ATTTATCAAGCCATTAGTGA+TGG | 0.536222 | 8_3:-63049332 | Msa1301120:CDS |
| GGTTGCATCATGCCTCCAGC+CGG | 0.537046 | 8_3:+63046815 | None:intergenic |
| TAATCCATGGGAGCAAGCAC+CGG | 0.538808 | 8_3:-63046834 | Msa1301120:CDS |
| TTTAATCTTGACTCCAAGGA+AGG | 0.541160 | 8_3:-63052183 | Msa1301120:five_prime_UTR |
| TCATGTTGAACGCCCAGCTA+AGG | 0.541327 | 8_3:-63051234 | Msa1301120:CDS |
| TTCACAGGTTCAGACGGTGG+AGG | 0.541839 | 8_3:+63048387 | None:intergenic |
| CAATAGGCAACGTCAGCCCT+AGG | 0.542438 | 8_3:+63050849 | None:intergenic |
| CTATTTGGTATTCAGGCTGG+AGG | 0.543661 | 8_3:-63046926 | Msa1301120:intron |
| GATTTGCAGATTGTTGTTGA+GGG | 0.546331 | 8_3:+63046663 | None:intergenic |
| GCGTTAACAGTGACCAATCA+GGG | 0.548545 | 8_3:+63046341 | None:intergenic |
| AACAGGCATACCTGAGCCAT+AGG | 0.555181 | 8_3:+63046604 | None:intergenic |
| CCTCATCTAAACATTTCTTG+TGG | 0.555267 | 8_3:-63046558 | Msa1301120:exon |
| TTCCATTCCCTGTACATGGT+GGG | 0.556286 | 8_3:-63046274 | Msa1301120:three_prime_UTR |
| TTTGAATAAATAGCAGATGA+GGG | 0.556478 | 8_3:-63046426 | Msa1301120:three_prime_UTR |
| TGCAAATGGAACCGCTGGGT+GGG | 0.556842 | 8_3:-63047464 | Msa1301120:CDS |
| ATGAGTTCTTCATGAAATGT+GGG | 0.558036 | 8_3:+63050194 | None:intergenic |
| CAATAAGGAACCAGAAGTGA+AGG | 0.558157 | 8_3:-63048430 | Msa1301120:CDS |
| CACTACTGTCTCATTGGCTA+AGG | 0.558365 | 8_3:-63051407 | Msa1301120:CDS |
| GTTGGAAGAGAAGAATGCCT+TGG | 0.561590 | 8_3:-63048167 | Msa1301120:CDS |
| GCAGCAACAAATGATGATGA+TGG | 0.566303 | 8_3:-63046687 | Msa1301120:CDS |
| TCCACTTTCACAGGTTCAGA+CGG | 0.567213 | 8_3:+63048381 | None:intergenic |
| CGTAATCTTGATATTGGACG+TGG | 0.570140 | 8_3:-63049025 | Msa1301120:CDS |
| GCATGATTTGAAACAGCAGA+AGG | 0.573496 | 8_3:+63047484 | None:intergenic |
| GAACCTAAAATCTTGAGCCC+GGG | 0.573519 | 8_3:-63052225 | Msa1301120:five_prime_UTR |
| AACAGTTTGAGAAAAGCACT+TGG | 0.582322 | 8_3:-63051445 | Msa1301120:CDS |
| AAGCTCTTGATATATACAGA+AGG | 0.592487 | 8_3:-63049180 | Msa1301120:CDS |
| CCACAAGAAATGTTTAGATG+AGG | 0.593524 | 8_3:+63046558 | None:intergenic |
| TTATTTACAGCTGCTCCTTG+TGG | 0.595184 | 8_3:+63049488 | None:intergenic |
| AACTGAGTAACTTTAGTGCA+AGG | 0.595650 | 8_3:-63046186 | Msa1301120:three_prime_UTR |
| GTTAATCCACTCGAATTAGT+CGG | 0.595936 | 8_3:+63052330 | None:intergenic |
| CCAGGGAGCAATAGTTCGAA+AGG | 0.596084 | 8_3:-63048828 | Msa1301120:CDS |
| ATCATCGTTTATGCAAGCCA+TGG | 0.597268 | 8_3:-63048873 | Msa1301120:CDS |
| GGCTTGCATAAACGATGATG+GGG | 0.600480 | 8_3:+63048877 | None:intergenic |
| ACAGGCATACCTGAGCCATA+GGG | 0.603728 | 8_3:+63046605 | None:intergenic |
| GATCCACCTCCCTCAGAGCA+CGG | 0.603781 | 8_3:+63050216 | None:intergenic |
| ATGCAAATGGAACCGCTGGG+TGG | 0.604316 | 8_3:-63047465 | Msa1301120:CDS |
| ATTTGCAGATTGTTGTTGAG+GGG | 0.604944 | 8_3:+63046664 | None:intergenic |
| TTGTCATTCACCGTGCTCTG+AGG | 0.605568 | 8_3:-63050226 | Msa1301120:CDS |
| AATAGAACCCCTATAAGTGG+AGG | 0.606033 | 8_3:+63052302 | None:intergenic |
| TTTCCATTCCCTGTACATGG+TGG | 0.607391 | 8_3:-63046275 | Msa1301120:three_prime_UTR |
| TCAGGTGGTGGTTGTACTGG+TGG | 0.607883 | 8_3:+63048354 | None:intergenic |
| ACTCCACCCTCCACTTATAG+GGG | 0.609175 | 8_3:-63052309 | Msa1301120:five_prime_UTR |
| GCTAAGGAGAAACACATTCG+AGG | 0.614196 | 8_3:-63051218 | Msa1301120:intron |
| ACTTTCACAGGTTCAGACGG+TGG | 0.618055 | 8_3:+63048384 | None:intergenic |
| GATCTCAGCTACAAGACCTA+GGG | 0.619658 | 8_3:-63050865 | Msa1301120:CDS |
| TTTCGTATGCTGCAGCCACA+AGG | 0.624793 | 8_3:-63049503 | Msa1301120:intron |
| AAATGCTAGCTATAATCCAT+GGG | 0.626464 | 8_3:-63046846 | Msa1301120:CDS |
| TAAGAACCGACTAATTCGAG+TGG | 0.626852 | 8_3:-63052336 | Msa1301120:five_prime_UTR |
| CATTCACCGTGCTCTGAGGG+AGG | 0.628270 | 8_3:-63050222 | Msa1301120:CDS |
| CAGGCATACCTGAGCCATAG+GGG | 0.630660 | 8_3:+63046606 | None:intergenic |
| ATTACCAAAAGATCAGGTGG+TGG | 0.630927 | 8_3:+63048342 | None:intergenic |
| AGCTCTTGATATATACAGAA+GGG | 0.631545 | 8_3:-63049179 | Msa1301120:CDS |
| AAAATCACGATCTATAAGGG+TGG | 0.637634 | 8_3:+63051941 | None:intergenic |
| GCTGCCATTTGAACAGAGTG+TGG | 0.639866 | 8_3:+63046749 | None:intergenic |
| TATACTTCCCACCATGTACA+GGG | 0.640986 | 8_3:+63046267 | None:intergenic |
| GGGAACGATGGCTAAAGCCA+AGG | 0.647252 | 8_3:+63048150 | None:intergenic |
| GTAATTACCAAAAGATCAGG+TGG | 0.648044 | 8_3:+63048339 | None:intergenic |
| ATAGAACCCCTATAAGTGGA+GGG | 0.648619 | 8_3:+63052303 | None:intergenic |
| TAAGGAACCAGAAGTGAAGG+AGG | 0.654919 | 8_3:-63048427 | Msa1301120:CDS |
| TATGTTGAAGAAAGAAGACG+AGG | 0.656711 | 8_3:+63051888 | None:intergenic |
| CAATCATACAATCCTTACAC+AGG | 0.659165 | 8_3:-63046581 | Msa1301120:CDS |
| CCCACGCATACAACCAAATG+CGG | 0.661291 | 8_3:+63046510 | None:intergenic |
| CTTAGCCAATGAGACAGTAG+TGG | 0.664093 | 8_3:+63051408 | None:intergenic |
| TCTAGCTATCTATGGCACAC+AGG | 0.669382 | 8_3:+63046460 | None:intergenic |
| TAGAAGTCATATGCTCAACA+TGG | 0.670556 | 8_3:-63050156 | Msa1301120:CDS |
| GAACCCCTATAAGTGGAGGG+TGG | 0.674044 | 8_3:+63052306 | None:intergenic |
| TATGTCAAAGATGCTCCCCA+GGG | 0.677197 | 8_3:-63048845 | Msa1301120:CDS |
| ATCATGCAAATGGAACCGCT+GGG | 0.691533 | 8_3:-63047468 | Msa1301120:CDS |
| TGTGTTGAAGTATGACATTG+AGG | 0.694540 | 8_3:-63049954 | Msa1301120:CDS |
| ATTATCAAAGACACATAACT+GGG | 0.698534 | 8_3:-63050805 | Msa1301120:CDS |
| TTTCGAACTATTGCTCCCTG+GGG | 0.700129 | 8_3:+63048830 | None:intergenic |
| GAGAGGGAGAATATGTCTGG+TGG | 0.700785 | 8_3:-63051475 | Msa1301120:exon |
| TCATTGGCTAAGGTCAACAG+TGG | 0.721103 | 8_3:-63051397 | Msa1301120:CDS |
| GCTTGCATAAACGATGATGG+GGG | 0.721996 | 8_3:+63048878 | None:intergenic |
| TGAGCCATAGGGGTGAACTG+TGG | 0.722937 | 8_3:+63046616 | None:intergenic |
| AAGAGCCAATTCCCACCCAG+CGG | 0.743374 | 8_3:+63047453 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAATTGAAAAGAAT+TGG | + | chr8_3:63049560-63049579 | None:intergenic | 10.0% |
| !!! | TGTTTTAGATTAAAATAAAA+TGG | + | chr8_3:63050001-63050020 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTAATCTAAAAC+AGG | - | chr8_3:63050000-63050019 | Msa1301120:CDS | 10.0% |
| !! | AAATAATTAACAATAGTAAT+TGG | - | chr8_3:63050443-63050462 | Msa1301120:intron | 10.0% |
| !!! | TGGTTATTTTATTTTATTGT+CGG | - | chr8_3:63046837-63046856 | Msa1301120:CDS | 15.0% |
| !!! | GATTAAATGTTTTTTTTAGT+TGG | - | chr8_3:63046861-63046880 | Msa1301120:CDS | 15.0% |
| !!! | CAATGACTTTTTTTTTTTTT+TGG | - | chr8_3:63046975-63046994 | Msa1301120:intron | 15.0% |
| !!! | GTTTTTATTCCATATAAAAA+AGG | + | chr8_3:63047752-63047771 | None:intergenic | 15.0% |
| !! | AACAAACAAAAAATTAAGTA+TGG | + | chr8_3:63049085-63049104 | None:intergenic | 15.0% |
| !!! | CTTTAAAAATATTTACTAAC+TGG | - | chr8_3:63049970-63049989 | Msa1301120:CDS | 15.0% |
| !!! | AATTACTGTGTTTTTTTTTT+TGG | - | chr8_3:63050180-63050199 | Msa1301120:CDS | 15.0% |
| !!! | AGTAATAATAAATTTGCTAA+TGG | + | chr8_3:63050740-63050759 | None:intergenic | 15.0% |
| !!! | TATATGATTTTTTATGTACA+AGG | - | chr8_3:63052106-63052125 | Msa1301120:five_prime_UTR | 15.0% |
| !!! | TATTTTCATTGGATAAATTT+TGG | + | chr8_3:63052281-63052300 | None:intergenic | 15.0% |
| !!! | CGATTTTCTTTAATGTTAAT+GGG | + | chr8_3:63046258-63046277 | None:intergenic | 20.0% |
| !!! | TCGATTTTCTTTAATGTTAA+TGG | + | chr8_3:63046259-63046278 | None:intergenic | 20.0% |
| !! | AACAAGAAGAAGAAAAATAT+AGG | + | chr8_3:63046710-63046729 | None:intergenic | 20.0% |
| !! | TGTATTTGATCTTATCAAAT+TGG | - | chr8_3:63047198-63047217 | Msa1301120:intron | 20.0% |
| !! | ATATTTATAGATTGTATACG+AGG | - | chr8_3:63047543-63047562 | Msa1301120:intron | 20.0% |
| !! | TATTTATAGATTGTATACGA+GGG | - | chr8_3:63047544-63047563 | Msa1301120:intron | 20.0% |
| !!! | AGATCTTATCCTTTTTTATA+TGG | - | chr8_3:63047740-63047759 | Msa1301120:intron | 20.0% |
| !! | ATGAAGAACTCATTAATTAT+GGG | - | chr8_3:63048318-63048337 | Msa1301120:intron | 20.0% |
| !! | CATTAAGTTTATAATCTTAC+AGG | + | chr8_3:63048582-63048601 | None:intergenic | 20.0% |
| !! | TACTAGTATGATATTACTAT+CGG | + | chr8_3:63048718-63048737 | None:intergenic | 20.0% |
| !! | TTCATTAAATTCAAAACAGT+TGG | + | chr8_3:63048930-63048949 | None:intergenic | 20.0% |
| !! | AATATAAGGTATATTCAGAA+AGG | + | chr8_3:63049121-63049140 | None:intergenic | 20.0% |
| !! | ATATACCTTATATTGCAATT+AGG | - | chr8_3:63049127-63049146 | Msa1301120:intron | 20.0% |
| !! | GTATTTAATAAAACAACTAG+TGG | - | chr8_3:63049769-63049788 | Msa1301120:intron | 20.0% |
| !! | TGATTAATGAGAGAAAAATT+GGG | + | chr8_3:63050619-63050638 | None:intergenic | 20.0% |
| !! | ATGATTAATGAGAGAAAAAT+TGG | + | chr8_3:63050620-63050639 | None:intergenic | 20.0% |
| !! | ACATGCATTTATTAATGAAT+AGG | - | chr8_3:63050690-63050709 | Msa1301120:intron | 20.0% |
| !! | CATGCATTTATTAATGAATA+GGG | - | chr8_3:63050691-63050710 | Msa1301120:intron | 20.0% |
| !!! | ACTAAACCTTTTAATATTAG+AGG | - | chr8_3:63050819-63050838 | Msa1301120:CDS | 20.0% |
| !! | GATTATCCTCTAATATTAAA+AGG | + | chr8_3:63050828-63050847 | None:intergenic | 20.0% |
| !! | TGAAATTAAATATCATGTCT+TGG | - | chr8_3:63050946-63050965 | Msa1301120:intron | 20.0% |
| !! | ATACAATCTCTTATAAATGT+TGG | - | chr8_3:63050978-63050997 | Msa1301120:intron | 20.0% |
| !! | ATATACTAGTATGTGAAAAT+TGG | + | chr8_3:63051173-63051192 | None:intergenic | 20.0% |
| !! | TGAATACATTTATAATCGAA+GGG | + | chr8_3:63051255-63051274 | None:intergenic | 20.0% |
| !! | TTGAATACATTTATAATCGA+AGG | + | chr8_3:63051256-63051275 | None:intergenic | 20.0% |
| !! | AGGGATATATTATTTGAAAA+AGG | - | chr8_3:63051318-63051337 | Msa1301120:intron | 20.0% |
| !! | TTGAATGATCCTTATAAATA+GGG | - | chr8_3:63051398-63051417 | Msa1301120:CDS | 20.0% |
| ! | ATTTATACTGAGATATGATC+TGG | + | chr8_3:63046231-63046250 | None:intergenic | 25.0% |
| !!! | ATTTTATTTTCTTCCTTCCT+TGG | + | chr8_3:63046335-63046354 | None:intergenic | 25.0% |
| ! | AAGAAAATCACGATCTATAA+GGG | + | chr8_3:63046567-63046586 | None:intergenic | 25.0% |
| ! | AAAGAAAATCACGATCTATA+AGG | + | chr8_3:63046568-63046587 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTTGAGTTTTTTC+AGG | - | chr8_3:63046991-63047010 | Msa1301120:intron | 25.0% |
| !!! | TTTGAGTTTTTTCAGGATTT+TGG | - | chr8_3:63046998-63047017 | Msa1301120:intron | 25.0% |
| !!! | AAATTGGTTTATCGTTTTGT+AGG | - | chr8_3:63047214-63047233 | Msa1301120:intron | 25.0% |
| ! | AAAACACAATCATAAAGAGA+GGG | + | chr8_3:63047323-63047342 | None:intergenic | 25.0% |
| ! | AAAAACACAATCATAAAGAG+AGG | + | chr8_3:63047324-63047343 | None:intergenic | 25.0% |
| !!! | CTCTTTATGATTGTGTTTTT+TGG | - | chr8_3:63047324-63047343 | Msa1301120:intron | 25.0% |
| !!! | TTCTTTGGAGTTAATCTTAA+CGG | - | chr8_3:63047371-63047390 | Msa1301120:intron | 25.0% |
| ! | AAGAGAACACATAAATACTT+GGG | + | chr8_3:63047598-63047617 | None:intergenic | 25.0% |
| ! | ATTATCAAAGACACATAACT+GGG | - | chr8_3:63047697-63047716 | Msa1301120:intron | 25.0% |
| ! | AAGTCATTTAGTGAATACAT+TGG | + | chr8_3:63047778-63047797 | None:intergenic | 25.0% |
| ! | AATGTATTCACTAAATGACT+TGG | - | chr8_3:63047777-63047796 | Msa1301120:intron | 25.0% |
| ! | ACCTTAAAGTCAAATAAAAG+TGG | - | chr8_3:63047947-63047966 | Msa1301120:intron | 25.0% |
| ! | CCTTAAAGTCAAATAAAAGT+GGG | - | chr8_3:63047948-63047967 | Msa1301120:intron | 25.0% |
| ! | TGTTTCTTGGTATTTAAACA+AGG | + | chr8_3:63048087-63048106 | None:intergenic | 25.0% |
| ! | TATGTACTGCAATGTTTATA+TGG | - | chr8_3:63048107-63048126 | Msa1301120:intron | 25.0% |
| ! | AGTCAATAAACCAAATAGAA+TGG | + | chr8_3:63048220-63048239 | None:intergenic | 25.0% |
| ! | CATGAAGAACTCATTAATTA+TGG | - | chr8_3:63048317-63048336 | Msa1301120:intron | 25.0% |
| ! | TGATTAACAAGATCAATGAT+GGG | + | chr8_3:63048417-63048436 | None:intergenic | 25.0% |
| ! | ATGATTAACAAGATCAATGA+TGG | + | chr8_3:63048418-63048437 | None:intergenic | 25.0% |
| ! | CTGAAACATGATATTACTAT+CGG | + | chr8_3:63048653-63048672 | None:intergenic | 25.0% |
| ! | GATAGTAATATCATACTAGT+AGG | - | chr8_3:63048717-63048736 | Msa1301120:intron | 25.0% |
| !! | AACTGTTAATATGGTTGATA+AGG | - | chr8_3:63049193-63049212 | Msa1301120:CDS | 25.0% |
| ! | CAATAGTCTCATATATACAT+CGG | + | chr8_3:63049257-63049276 | None:intergenic | 25.0% |
| ! | GTGAATTTAATAATAGAGAG+AGG | + | chr8_3:63049381-63049400 | None:intergenic | 25.0% |
| ! | ATCCTGAAATTTATGTTCTA+AGG | - | chr8_3:63049403-63049422 | Msa1301120:intron | 25.0% |
| ! | TACACGGTAATATTAGTATT+TGG | - | chr8_3:63049794-63049813 | Msa1301120:intron | 25.0% |
| ! | ACACGGTAATATTAGTATTT+GGG | - | chr8_3:63049795-63049814 | Msa1301120:intron | 25.0% |
| ! | TTTGGCTATTGAATACAATA+AGG | - | chr8_3:63050057-63050076 | Msa1301120:intron | 25.0% |
| ! | GGTAATTAATACCAAAAACA+GGG | + | chr8_3:63050208-63050227 | None:intergenic | 25.0% |
| !!! | TTTTTGGTATTAATTACCGA+TGG | - | chr8_3:63050210-63050229 | Msa1301120:CDS | 25.0% |
| !! | TTTTGAATGTGCAAATTAAC+TGG | + | chr8_3:63050425-63050444 | None:intergenic | 25.0% |
| ! | TGACAAAGTAACATTTAGTT+TGG | + | chr8_3:63050573-63050592 | None:intergenic | 25.0% |
| ! | GGAAGAAATTAATGATGTAT+TGG | + | chr8_3:63050598-63050617 | None:intergenic | 25.0% |
| !!! | AATAAATTTGCTAATGGACA+TGG | + | chr8_3:63050734-63050753 | None:intergenic | 25.0% |
| ! | ATCTTAAACAACTGCTAATT+TGG | - | chr8_3:63050781-63050800 | Msa1301120:intron | 25.0% |
| ! | ACTTATAAAAAGATACCAAG+GGG | + | chr8_3:63051144-63051163 | None:intergenic | 25.0% |
| ! | GACTTATAAAAAGATACCAA+GGG | + | chr8_3:63051145-63051164 | None:intergenic | 25.0% |
| ! | CTATTTATAAGGATCATTCA+AGG | + | chr8_3:63051399-63051418 | None:intergenic | 25.0% |
| ! | CTTGAATGATCCTTATAAAT+AGG | - | chr8_3:63051397-63051416 | Msa1301120:CDS | 25.0% |
| ! | TTATTAGCACATATGATTTG+TGG | - | chr8_3:63051452-63051471 | Msa1301120:CDS | 25.0% |
| ! | TAGATACATACACAAATTGA+GGG | + | chr8_3:63051490-63051509 | None:intergenic | 25.0% |
| ! | TTAGATACATACACAAATTG+AGG | + | chr8_3:63051491-63051510 | None:intergenic | 25.0% |
| ! | GTTTCTGTTAATAAGTTAGA+TGG | - | chr8_3:63051552-63051571 | Msa1301120:intron | 25.0% |
| ! | ATTGTATTAGAGGCAAAAAA+TGG | + | chr8_3:63051726-63051745 | None:intergenic | 25.0% |
| !!! | ATTTTTTGCCTCTAATACAA+TGG | - | chr8_3:63051725-63051744 | Msa1301120:intron | 25.0% |
| ! | GAACAGAAAATTTGTATCAT+AGG | - | chr8_3:63052018-63052037 | Msa1301120:five_prime_UTR | 25.0% |
| !! | TTTTGAATAAATAGCAGATG+AGG | - | chr8_3:63052075-63052094 | Msa1301120:five_prime_UTR | 25.0% |
| ! | TTTGAATAAATAGCAGATGA+GGG | - | chr8_3:63052076-63052095 | Msa1301120:five_prime_UTR | 25.0% |
| !! | GACTTGACATATATTTTCAT+TGG | + | chr8_3:63052292-63052311 | None:intergenic | 25.0% |
| TTAAATAGAACCCCTATAAG+TGG | + | chr8_3:63046206-63046225 | None:intergenic | 30.0% | |
| CTTGGAGTCAAGATTAAATT+TGG | + | chr8_3:63046317-63046336 | None:intergenic | 30.0% | |
| CAAATTTAATCTTGACTCCA+AGG | - | chr8_3:63046315-63046334 | Msa1301120:three_prime_UTR | 30.0% | |
| AAATAAAATAACCAGCAGCA+AGG | + | chr8_3:63046831-63046850 | None:intergenic | 30.0% | |
| AGTCATTGACAAATCAAAGA+TGG | + | chr8_3:63046963-63046982 | None:intergenic | 30.0% | |
| CATTTCCACATAAACTTTGT+TGG | - | chr8_3:63047147-63047166 | Msa1301120:intron | 30.0% | |
| ATCAACCAACAAAGTTTATG+TGG | + | chr8_3:63047155-63047174 | None:intergenic | 30.0% | |
| ! | CATAAACTTTGTTGGTTGAT+TGG | - | chr8_3:63047155-63047174 | Msa1301120:intron | 30.0% |
| CAAAGAAGGAATGAAACATT+TGG | + | chr8_3:63047358-63047377 | None:intergenic | 30.0% | |
| CAAATGTTTCATTCCTTCTT+TGG | - | chr8_3:63047356-63047375 | Msa1301120:intron | 30.0% | |
| GTTAAGATTAACTCCAAAGA+AGG | + | chr8_3:63047372-63047391 | None:intergenic | 30.0% | |
| !! | TCTTTGGAGTTAATCTTAAC+GGG | - | chr8_3:63047372-63047391 | Msa1301120:intron | 30.0% |
| GAAGAGAACACATAAATACT+TGG | + | chr8_3:63047599-63047618 | None:intergenic | 30.0% | |
| GATTATCAAAGACACATAAC+TGG | - | chr8_3:63047696-63047715 | Msa1301120:intron | 30.0% | |
| !! | CCCACTTTTATTTGACTTTA+AGG | + | chr8_3:63047951-63047970 | None:intergenic | 30.0% |
| TTGCATGTGTGATGAATAAA+CGG | + | chr8_3:63048047-63048066 | None:intergenic | 30.0% | |
| ATTGCAGTACATATGTTTCT+TGG | + | chr8_3:63048100-63048119 | None:intergenic | 30.0% | |
| ! | CTATTTGGTTTATTGACTAG+TGG | - | chr8_3:63048222-63048241 | Msa1301120:intron | 30.0% |
| !!! | TGACTAGTGGTTTTATCTAT+AGG | - | chr8_3:63048235-63048254 | Msa1301120:intron | 30.0% |
| ATGAGTTCTTCATGAAATGT+GGG | + | chr8_3:63048311-63048330 | None:intergenic | 30.0% | |
| AATGAGTTCTTCATGAAATG+TGG | + | chr8_3:63048312-63048331 | None:intergenic | 30.0% | |
| GATTAACAAGATCAATGATG+GGG | + | chr8_3:63048416-63048435 | None:intergenic | 30.0% | |
| ! | TCGCAGTTATGCATTATTTT+TGG | - | chr8_3:63048503-63048522 | Msa1301120:intron | 30.0% |
| !!! | CAGTTATGCATTATTTTTGG+AGG | - | chr8_3:63048506-63048525 | Msa1301120:intron | 30.0% |
| !!! | ATGCATTATTTTTGGAGGAA+AGG | - | chr8_3:63048511-63048530 | Msa1301120:intron | 30.0% |
| TCATGCATGTTCTTTGAATA+AGG | - | chr8_3:63048777-63048796 | Msa1301120:intron | 30.0% | |
| TAGTACAATATTAATGCTGC+TGG | + | chr8_3:63048967-63048986 | None:intergenic | 30.0% | |
| TAAATAAGTGACCTACCAAT+TGG | + | chr8_3:63049061-63049080 | None:intergenic | 30.0% | |
| AGCAACCTAATTGCAATATA+AGG | + | chr8_3:63049135-63049154 | None:intergenic | 30.0% | |
| ! | ATATTGCAATTAGGTTGCTT+CGG | - | chr8_3:63049136-63049155 | Msa1301120:intron | 30.0% |
| ATTTATCAAGCCATTAGTGA+TGG | - | chr8_3:63049170-63049189 | Msa1301120:CDS | 30.0% | |
| ATTAACAGTTCCATCACTAA+TGG | + | chr8_3:63049183-63049202 | None:intergenic | 30.0% | |
| ! | TAGTGATGGAACTGTTAATA+TGG | - | chr8_3:63049184-63049203 | Msa1301120:CDS | 30.0% |
| AAGCTCTTGATATATACAGA+AGG | - | chr8_3:63049322-63049341 | Msa1301120:CDS | 30.0% | |
| AGCTCTTGATATATACAGAA+GGG | - | chr8_3:63049323-63049342 | Msa1301120:CDS | 30.0% | |
| TTGATATATACAGAAGGGTT+GGG | - | chr8_3:63049328-63049347 | Msa1301120:CDS | 30.0% | |
| CACCTTAGAACATAAATTTC+AGG | + | chr8_3:63049408-63049427 | None:intergenic | 30.0% | |
| !! | ATGTTCTAAGGTGCTTTATT+TGG | - | chr8_3:63049415-63049434 | Msa1301120:intron | 30.0% |
| !! | TGTTCTAAGGTGCTTTATTT+GGG | - | chr8_3:63049416-63049435 | Msa1301120:intron | 30.0% |
| ATATGCCGTAATCTTGATAT+TGG | - | chr8_3:63049471-63049490 | Msa1301120:CDS | 30.0% | |
| !! | AAAACAACTAGTGGATTACA+CGG | - | chr8_3:63049778-63049797 | Msa1301120:intron | 30.0% |
| CACGGTAATATTAGTATTTG+GGG | - | chr8_3:63049796-63049815 | Msa1301120:intron | 30.0% | |
| ! | TCAATAGCCAAAACTTCTTT+TGG | + | chr8_3:63050049-63050068 | None:intergenic | 30.0% |
| ACAGTAATTACCAAAAGATC+AGG | + | chr8_3:63050169-63050188 | None:intergenic | 30.0% | |
| CGGTAATTAATACCAAAAAC+AGG | + | chr8_3:63050209-63050228 | None:intergenic | 30.0% | |
| TTCTAGTAGGCAAATCAAAA+TGG | + | chr8_3:63050285-63050304 | None:intergenic | 30.0% | |
| !! | TTGATTTGCCTACTAGAATA+TGG | - | chr8_3:63050287-63050306 | Msa1301120:intron | 30.0% |
| CAAAAGGCTAAAAAATTACC+GGG | + | chr8_3:63050375-63050394 | None:intergenic | 30.0% | |
| GCAAAAGGCTAAAAAATTAC+CGG | + | chr8_3:63050376-63050395 | None:intergenic | 30.0% | |
| AACAATAGTAATTGGATCGT+TGG | - | chr8_3:63050451-63050470 | Msa1301120:intron | 30.0% | |
| ACAATAGTAATTGGATCGTT+GGG | - | chr8_3:63050452-63050471 | Msa1301120:intron | 30.0% | |
| CGCAAAAACGACTATTAATT+TGG | + | chr8_3:63050537-63050556 | None:intergenic | 30.0% | |
| AAACAACTGCTAATTTGGAA+TGG | - | chr8_3:63050786-63050805 | Msa1301120:intron | 30.0% | |
| CAGAAAATAGAAAATGATGC+TGG | + | chr8_3:63050870-63050889 | None:intergenic | 30.0% | |
| ATAAGAGATTGTATGAGTTG+AGG | + | chr8_3:63050972-63050991 | None:intergenic | 30.0% | |
| CTTATAAAAAGATACCAAGG+GGG | + | chr8_3:63051143-63051162 | None:intergenic | 30.0% | |
| GGACTTATAAAAAGATACCA+AGG | + | chr8_3:63051146-63051165 | None:intergenic | 30.0% | |
| TAGTATGTGAAAATTGGCAA+GGG | + | chr8_3:63051167-63051186 | None:intergenic | 30.0% | |
| ATGATCCTTATAAATAGGGA+TGG | - | chr8_3:63051402-63051421 | Msa1301120:CDS | 30.0% | |
| AATAAGTTAGATGGCCTATT+TGG | - | chr8_3:63051561-63051580 | Msa1301120:intron | 30.0% | |
| !! | ATGGATTATAGCTAGCATTT+TGG | + | chr8_3:63051656-63051675 | None:intergenic | 30.0% |
| AAAATGCTAGCTATAATCCA+TGG | - | chr8_3:63051655-63051674 | Msa1301120:intron | 30.0% | |
| AAATGCTAGCTATAATCCAT+GGG | - | chr8_3:63051656-63051675 | Msa1301120:intron | 30.0% | |
| TAAGGATTGTATGATTGAAC+AGG | + | chr8_3:63051918-63051937 | None:intergenic | 30.0% | |
| CTAAACATTTCTTGTGGATA+AGG | - | chr8_3:63051950-63051969 | Msa1301120:five_prime_UTR | 30.0% | |
| AATTTCTCTCTAGCTATCTA+TGG | + | chr8_3:63052053-63052072 | None:intergenic | 30.0% | |
| ! | GAATTTCTTTTATCCCTGAT+TGG | - | chr8_3:63052148-63052167 | Msa1301120:five_prime_UTR | 30.0% |
| ! | GAAATTTGTTCCTGATGAAT+TGG | - | chr8_3:63052192-63052211 | Msa1301120:five_prime_UTR | 30.0% |
| GAAAACAATACCAATTCATC+AGG | + | chr8_3:63052205-63052224 | None:intergenic | 30.0% | |
| GTTAATCCACTCGAATTAGT+CGG | + | chr8_3:63046175-63046194 | None:intergenic | 35.0% | |
| TTTAATCTTGACTCCAAGGA+AGG | - | chr8_3:63046319-63046338 | Msa1301120:three_prime_UTR | 35.0% | |
| GAGAGAGAGAAAAGAGAAAA+GGG | + | chr8_3:63046450-63046469 | None:intergenic | 35.0% | |
| AAAATCACGATCTATAAGGG+TGG | + | chr8_3:63046564-63046583 | None:intergenic | 35.0% | |
| TATGTTGAAGAAAGAAGACG+AGG | + | chr8_3:63046617-63046636 | None:intergenic | 35.0% | |
| ! | TTTTATTCATACCTTGCTGC+TGG | - | chr8_3:63046817-63046836 | Msa1301120:CDS | 35.0% |
| !!! | AGGATTTTGGAATTGTGAGA+GGG | - | chr8_3:63047011-63047030 | Msa1301120:intron | 35.0% |
| !! | AACAGTTTGAGAAAAGCACT+TGG | - | chr8_3:63047057-63047076 | Msa1301120:intron | 35.0% |
| ! | CTTTGTTGGTTGATTGGAAT+TGG | - | chr8_3:63047161-63047180 | Msa1301120:intron | 35.0% |
| ! | GTTTATCGTTTTGTAGGAGT+TGG | - | chr8_3:63047220-63047239 | Msa1301120:intron | 35.0% |
| ACAAACAAATCGATGACGTA+GGG | + | chr8_3:63047414-63047433 | None:intergenic | 35.0% | |
| ATTGTATACGAGGGAATTGT+TGG | - | chr8_3:63047553-63047572 | Msa1301120:intron | 35.0% | |
| ACCTTGGCAAGAAAGAATAT+AGG | + | chr8_3:63047840-63047859 | None:intergenic | 35.0% | |
| ATGCAATGTTTCATCAACCT+TGG | + | chr8_3:63047856-63047875 | None:intergenic | 35.0% | |
| GGTGAATTACATAATCGCAA+AGG | + | chr8_3:63048167-63048186 | None:intergenic | 35.0% | |
| ! | TGTGTTTGTGCCATTCTATT+TGG | - | chr8_3:63048207-63048226 | Msa1301120:intron | 35.0% |
| TAGAAGTCATATGCTCAACA+TGG | - | chr8_3:63048346-63048365 | Msa1301120:intron | 35.0% | |
| !!! | ATTATTTTTGGAGGAAAGGC+TGG | - | chr8_3:63048515-63048534 | Msa1301120:intron | 35.0% |
| TGTGTTGAAGTATGACATTG+AGG | - | chr8_3:63048548-63048567 | Msa1301120:intron | 35.0% | |
| TCTGTGACAAAGTTCACAAT+TGG | + | chr8_3:63048811-63048830 | None:intergenic | 35.0% | |
| AATTGTGAACTTTGTCACAG+AGG | - | chr8_3:63048810-63048829 | Msa1301120:intron | 35.0% | |
| TTCTGCAGTATCCAAATCTT+TGG | + | chr8_3:63048837-63048856 | None:intergenic | 35.0% | |
| TAGTCTCATATATACATCGG+AGG | + | chr8_3:63049254-63049273 | None:intergenic | 35.0% | |
| !!! | GACAGTTTTTTGAGATGCAA+CGG | - | chr8_3:63049286-63049305 | Msa1301120:intron | 35.0% |
| !!! | ACAGTTTTTTGAGATGCAAC+GGG | - | chr8_3:63049287-63049306 | Msa1301120:intron | 35.0% |
| CTTGATATATACAGAAGGGT+TGG | - | chr8_3:63049327-63049346 | Msa1301120:CDS | 35.0% | |
| CACGTCCAATATCAAGATTA+CGG | + | chr8_3:63049479-63049498 | None:intergenic | 35.0% | |
| ATCTTTGACATAGTCTTCCA+TGG | + | chr8_3:63049649-63049668 | None:intergenic | 35.0% | |
| CAAAGGTTACAGAACAAAAC+AGG | + | chr8_3:63049724-63049743 | None:intergenic | 35.0% | |
| !! | GTTTTGTTCTGTAACCTTTG+TGG | - | chr8_3:63049724-63049743 | Msa1301120:intron | 35.0% |
| CTTCATACATAAAGCCACAA+AGG | + | chr8_3:63049741-63049760 | None:intergenic | 35.0% | |
| ATATCAAGTCCTGAAACAAC+TGG | + | chr8_3:63049885-63049904 | None:intergenic | 35.0% | |
| !! | AGCAGCAATTTTGTTGTCAA+CGG | + | chr8_3:63050026-63050045 | None:intergenic | 35.0% |
| GTAATTACCAAAAGATCAGG+TGG | + | chr8_3:63050166-63050185 | None:intergenic | 35.0% | |
| !!! | TTTTTTTGGTGCCCTGTTTT+TGG | - | chr8_3:63050194-63050213 | Msa1301120:CDS | 35.0% |
| GTTATATGCAAAGCAACCAT+CGG | + | chr8_3:63050229-63050248 | None:intergenic | 35.0% | |
| !!! | GGAGAGAAAATTTTTAGTGC+AGG | + | chr8_3:63050264-63050283 | None:intergenic | 35.0% |
| AGGATCATCCATATTCTAGT+AGG | + | chr8_3:63050298-63050317 | None:intergenic | 35.0% | |
| TAAAAAATTACCGGGAACGA+TGG | + | chr8_3:63050367-63050386 | None:intergenic | 35.0% | |
| TGTCTTAACGCAAATGCAAA+AGG | + | chr8_3:63050391-63050410 | None:intergenic | 35.0% | |
| CAATAGTAATTGGATCGTTG+GGG | - | chr8_3:63050453-63050472 | Msa1301120:intron | 35.0% | |
| ! | CGACTATTAATTTGGAACGA+AGG | + | chr8_3:63050529-63050548 | None:intergenic | 35.0% |
| ! | GCTGTTTCAAATCATGCAAA+TGG | - | chr8_3:63051024-63051043 | Msa1301120:intron | 35.0% |
| CTAGTATGTGAAAATTGGCA+AGG | + | chr8_3:63051168-63051187 | None:intergenic | 35.0% | |
| !! | ACAGATTAGTAGTGCTGATT+AGG | - | chr8_3:63051298-63051317 | Msa1301120:intron | 35.0% |
| !! | CAGATTAGTAGTGCTGATTA+GGG | - | chr8_3:63051299-63051318 | Msa1301120:intron | 35.0% |
| !! | GAAAGAGTGCTTATATTCAG+AGG | - | chr8_3:63051363-63051382 | Msa1301120:intron | 35.0% |
| ATCCTTATAAATAGGGATGG+AGG | - | chr8_3:63051405-63051424 | Msa1301120:CDS | 35.0% | |
| TCCTTATAAATAGGGATGGA+GGG | - | chr8_3:63051406-63051425 | Msa1301120:CDS | 35.0% | |
| TTCTCAGTGCATCATCATAT+AGG | + | chr8_3:63051626-63051645 | None:intergenic | 35.0% | |
| AAAAATGGATCGTGCATTGT+CGG | + | chr8_3:63051711-63051730 | None:intergenic | 35.0% | |
| ! | ATTTGCAGATTGTTGTTGAG+GGG | + | chr8_3:63051841-63051860 | None:intergenic | 35.0% |
| ! | GATTTGCAGATTGTTGTTGA+GGG | + | chr8_3:63051842-63051861 | None:intergenic | 35.0% |
| ! | CAACAATCTGCAAATCCTTT+TGG | - | chr8_3:63051846-63051865 | Msa1301120:intron | 35.0% |
| CCATATTGAGGATTTCCAAA+AGG | + | chr8_3:63051864-63051883 | None:intergenic | 35.0% | |
| !! | CCTTTTGGAAATCCTCAATA+TGG | - | chr8_3:63051861-63051880 | Msa1301120:intron | 35.0% |
| CAATCATACAATCCTTACAC+AGG | - | chr8_3:63051921-63051940 | Msa1301120:five_prime_UTR | 35.0% | |
| CCACAAGAAATGTTTAGATG+AGG | + | chr8_3:63051947-63051966 | None:intergenic | 35.0% | |
| CCTCATCTAAACATTTCTTG+TGG | - | chr8_3:63051944-63051963 | Msa1301120:five_prime_UTR | 35.0% | |
| TGGATAAGGAGCAAAAAACA+TGG | - | chr8_3:63051964-63051983 | Msa1301120:five_prime_UTR | 35.0% | |
| ! | TAAATAGCAGATGAGGGTTT+TGG | - | chr8_3:63052082-63052101 | Msa1301120:five_prime_UTR | 35.0% |
| AACTGAGTAACTTTAGTGCA+AGG | - | chr8_3:63052316-63052335 | Msa1301120:five_prime_UTR | 35.0% | |
| TAAGAACCGACTAATTCGAG+TGG | - | chr8_3:63046166-63046185 | Msa1301120:three_prime_UTR | 40.0% | |
| ATAGAACCCCTATAAGTGGA+GGG | + | chr8_3:63046202-63046221 | None:intergenic | 40.0% | |
| AATAGAACCCCTATAAGTGG+AGG | + | chr8_3:63046203-63046222 | None:intergenic | 40.0% | |
| !! | TTGGTTCGTCCTAATTTTCC+CGG | + | chr8_3:63046298-63046317 | None:intergenic | 40.0% |
| CGAGAGAGAGAAAAGAGAAA+AGG | + | chr8_3:63046451-63046470 | None:intergenic | 40.0% | |
| !!! | CAGGATTTTGGAATTGTGAG+AGG | - | chr8_3:63047010-63047029 | Msa1301120:intron | 40.0% |
| !! | AAAAGCACTTGGAGCTCTTA+AGG | - | chr8_3:63047068-63047087 | Msa1301120:intron | 40.0% |
| TAAGGTCAACAGTGGTTACA+AGG | - | chr8_3:63047113-63047132 | Msa1301120:intron | 40.0% | |
| GAATGTGTTTCTCCTTAGCT+GGG | + | chr8_3:63047283-63047302 | None:intergenic | 40.0% | |
| GACAAACAAATCGATGACGT+AGG | + | chr8_3:63047415-63047434 | None:intergenic | 40.0% | |
| ! | TTGTCACATGTTCTGAACCA+AGG | - | chr8_3:63047430-63047449 | Msa1301120:CDS | 40.0% |
| CATAATAAACGCGATGTCCT+TGG | + | chr8_3:63047450-63047469 | None:intergenic | 40.0% | |
| AGGGAATTGTTGGATACGTT+AGG | - | chr8_3:63047563-63047582 | Msa1301120:intron | 40.0% | |
| GGGAATTGTTGGATACGTTA+GGG | - | chr8_3:63047564-63047583 | Msa1301120:intron | 40.0% | |
| GCCTATATTCTTTCTTGCCA+AGG | - | chr8_3:63047836-63047855 | Msa1301120:intron | 40.0% | |
| ATTCACAAACACATGCTCAG+TGG | + | chr8_3:63048188-63048207 | None:intergenic | 40.0% | |
| AAAGATGACTCGAGTCCAAA+TGG | - | chr8_3:63048377-63048396 | Msa1301120:CDS | 40.0% | |
| GGATTAAGACAAGCACCATT+TGG | + | chr8_3:63048395-63048414 | None:intergenic | 40.0% | |
| ! | TTCGTGTTTTGTGTTCAGCA+TGG | - | chr8_3:63048463-63048482 | Msa1301120:CDS | 40.0% |
| ! | TCGTGTTTTGTGTTCAGCAT+GGG | - | chr8_3:63048464-63048483 | Msa1301120:CDS | 40.0% |
| ! | AGCATGGGATTTTTCTGCAT+GGG | - | chr8_3:63048479-63048498 | Msa1301120:CDS | 40.0% |
| TAGAGAAGCTGTTGTAAAGC+TGG | + | chr8_3:63048875-63048894 | None:intergenic | 40.0% | |
| CAGCTTCTCTATCGAGTTAT+TGG | - | chr8_3:63048884-63048903 | Msa1301120:intron | 40.0% | |
| TTATTTACAGCTGCTCCTTG+TGG | + | chr8_3:63049017-63049036 | None:intergenic | 40.0% | |
| GATTCAGTTAGCACTCCAAT+TGG | - | chr8_3:63049043-63049062 | Msa1301120:CDS | 40.0% | |
| CGTAATCTTGATATTGGACG+TGG | - | chr8_3:63049477-63049496 | Msa1301120:CDS | 40.0% | |
| GAAGTTCATCAAAGTTGAGC+AGG | - | chr8_3:63049503-63049522 | Msa1301120:intron | 40.0% | |
| TTCATCAAAGTTGAGCAGGT+TGG | - | chr8_3:63049507-63049526 | Msa1301120:intron | 40.0% | |
| ! | TGGCTTGCATAAACGATGAT+GGG | + | chr8_3:63049629-63049648 | None:intergenic | 40.0% |
| ! | ATGGCTTGCATAAACGATGA+TGG | + | chr8_3:63049630-63049649 | None:intergenic | 40.0% |
| ATCATCGTTTATGCAAGCCA+TGG | - | chr8_3:63049629-63049648 | Msa1301120:CDS | 40.0% | |
| AGCAATAGTTCGAAAGGATC+AGG | - | chr8_3:63049680-63049699 | Msa1301120:intron | 40.0% | |
| ACATGGACAACAACTATGAG+CGG | + | chr8_3:63049842-63049861 | None:intergenic | 40.0% | |
| GGTGAAAGTGAAACAGTACA+TGG | + | chr8_3:63049859-63049878 | None:intergenic | 40.0% | |
| ! | TGCTGCTCCAAAAGAAGTTT+TGG | - | chr8_3:63050039-63050058 | Msa1301120:intron | 40.0% |
| CAATAAGGAACCAGAAGTGA+AGG | - | chr8_3:63050072-63050091 | Msa1301120:intron | 40.0% | |
| ATTACCAAAAGATCAGGTGG+TGG | + | chr8_3:63050163-63050182 | None:intergenic | 40.0% | |
| ! | TAATTTGGAATGGAGCGAGT+AGG | - | chr8_3:63050796-63050815 | Msa1301120:intron | 40.0% |
| ! | GCATGATTTGAAACAGCAGA+AGG | + | chr8_3:63051021-63051040 | None:intergenic | 40.0% |
| TCAGCACTACTAATCTGTCT+TGG | + | chr8_3:63051296-63051315 | None:intergenic | 40.0% | |
| TCCCTCCATCCCTATTTATA+AGG | + | chr8_3:63051410-63051429 | None:intergenic | 40.0% | |
| TCAAGTATACGTGCAAGCAA+GGG | + | chr8_3:63051531-63051550 | None:intergenic | 40.0% | |
| ATCAAGTATACGTGCAAGCA+AGG | + | chr8_3:63051532-63051551 | None:intergenic | 40.0% | |
| AGATGGCCTATTTGGTATTC+AGG | - | chr8_3:63051569-63051588 | Msa1301120:intron | 40.0% | |
| GATACATGAAAGACTGTTGC+TGG | + | chr8_3:63051788-63051807 | None:intergenic | 40.0% | |
| ! | GCAGCAACAAATGATGATGA+TGG | - | chr8_3:63051815-63051834 | Msa1301120:intron | 40.0% |
| ! | GGATTTGCAGATTGTTGTTG+AGG | + | chr8_3:63051843-63051862 | None:intergenic | 40.0% |
| AAACATGGATACTCCGCATT+TGG | - | chr8_3:63051979-63051998 | Msa1301120:five_prime_UTR | 40.0% | |
| TATACTTCCCACCATGTACA+GGG | + | chr8_3:63052238-63052257 | None:intergenic | 40.0% | |
| ATATACTTCCCACCATGTAC+AGG | + | chr8_3:63052239-63052258 | None:intergenic | 40.0% | |
| TAACTCCACCCTCCACTTAT+AGG | - | chr8_3:63046191-63046210 | Msa1301120:three_prime_UTR | 45.0% | |
| AACTCCACCCTCCACTTATA+GGG | - | chr8_3:63046192-63046211 | Msa1301120:three_prime_UTR | 45.0% | |
| CGAACCTAAAATCTTGAGCC+CGG | - | chr8_3:63046276-63046295 | Msa1301120:three_prime_UTR | 45.0% | |
| GAACCTAAAATCTTGAGCCC+GGG | - | chr8_3:63046277-63046296 | Msa1301120:three_prime_UTR | 45.0% | |
| ! | TTTCCCGGGCTCAAGATTTT+AGG | + | chr8_3:63046283-63046302 | None:intergenic | 45.0% |
| ATCTTGAGCCCGGGAAAATT+AGG | - | chr8_3:63046286-63046305 | Msa1301120:three_prime_UTR | 45.0% | |
| ! | TGGTTCGTCCTAATTTTCCC+GGG | + | chr8_3:63046297-63046316 | None:intergenic | 45.0% |
| TATGAGCTGCTTGCTTCGTT+TGG | + | chr8_3:63046397-63046416 | None:intergenic | 45.0% | |
| TGTGAGAGGGAGAATATGTC+TGG | - | chr8_3:63047024-63047043 | Msa1301120:intron | 45.0% | |
| CTTAGCCAATGAGACAGTAG+TGG | + | chr8_3:63047097-63047116 | None:intergenic | 45.0% | |
| ! | CACTACTGTCTCATTGGCTA+AGG | - | chr8_3:63047095-63047114 | Msa1301120:intron | 45.0% |
| ! | TCATTGGCTAAGGTCAACAG+TGG | - | chr8_3:63047105-63047124 | Msa1301120:intron | 45.0% |
| CGAATGTGTTTCTCCTTAGC+TGG | + | chr8_3:63047284-63047303 | None:intergenic | 45.0% | |
| GCTAAGGAGAAACACATTCG+AGG | - | chr8_3:63047284-63047303 | Msa1301120:intron | 45.0% | |
| GATCTCAGCTACAAGACCTA+GGG | - | chr8_3:63047637-63047656 | Msa1301120:intron | 45.0% | |
| GATCAAGCCACAATCTTCAG+CGG | + | chr8_3:63047917-63047936 | None:intergenic | 45.0% | |
| ! | CAGCATGGGATTTTTCTGCA+TGG | - | chr8_3:63048478-63048497 | Msa1301120:CDS | 45.0% |
| GTCACAGAGGACCAAAGATT+TGG | - | chr8_3:63048823-63048842 | Msa1301120:CDS | 45.0% | |
| ! | CTATCGAGTTATTGGTTGCC+AGG | - | chr8_3:63048892-63048911 | Msa1301120:intron | 45.0% |
| AGTTGGATCAAAAGCTCACC+TGG | + | chr8_3:63048913-63048932 | None:intergenic | 45.0% | |
| CAGTTAGCACTCCAATTGGT+AGG | - | chr8_3:63049047-63049066 | Msa1301120:CDS | 45.0% | |
| !! | AAGGTGCTTTATTTGGGTCC+AGG | - | chr8_3:63049422-63049441 | Msa1301120:intron | 45.0% |
| ! | GCTTGCATAAACGATGATGG+GGG | + | chr8_3:63049627-63049646 | None:intergenic | 45.0% |
| GGCTTGCATAAACGATGATG+GGG | + | chr8_3:63049628-63049647 | None:intergenic | 45.0% | |
| TATGTCAAAGATGCTCCCCA+GGG | - | chr8_3:63049657-63049676 | Msa1301120:CDS | 45.0% | |
| TTTCGAACTATTGCTCCCTG+GGG | + | chr8_3:63049675-63049694 | None:intergenic | 45.0% | |
| CTTTCGAACTATTGCTCCCT+GGG | + | chr8_3:63049676-63049695 | None:intergenic | 45.0% | |
| ! | TTCACCTCTCCAGTTGTTTC+AGG | - | chr8_3:63049873-63049892 | Msa1301120:intron | 45.0% |
| AAGTCCTGAAACAACTGGAG+AGG | + | chr8_3:63049880-63049899 | None:intergenic | 45.0% | |
| TAAGGAACCAGAAGTGAAGG+AGG | - | chr8_3:63050075-63050094 | Msa1301120:intron | 45.0% | |
| ! | ACAACCACCACCTGATCTTT+TGG | - | chr8_3:63050156-63050175 | Msa1301120:CDS | 45.0% |
| GTTGGAAGAGAAGAATGCCT+TGG | - | chr8_3:63050335-63050354 | Msa1301120:intron | 45.0% | |
| AATCATGCAAATGGAACCGC+TGG | - | chr8_3:63051033-63051052 | Msa1301120:intron | 45.0% | |
| ATCATGCAAATGGAACCGCT+GGG | - | chr8_3:63051034-63051053 | Msa1301120:intron | 45.0% | |
| GCAGCACTTTCATTTGAGCT+AGG | + | chr8_3:63051084-63051103 | None:intergenic | 45.0% | |
| GCAAGCAAGGGTAATGATTG+TGG | + | chr8_3:63051519-63051538 | None:intergenic | 45.0% | |
| CTCCAGCCTGAATACCAAAT+AGG | + | chr8_3:63051578-63051597 | None:intergenic | 45.0% | |
| CTATTTGGTATTCAGGCTGG+AGG | - | chr8_3:63051576-63051595 | Msa1301120:intron | 45.0% | |
| TGGAGCAGCCATTGTATTAG+AGG | + | chr8_3:63051736-63051755 | None:intergenic | 45.0% | |
| TGCTCCACACTCTGTTCAAA+TGG | - | chr8_3:63051749-63051768 | Msa1301120:intron | 45.0% | |
| TGAACTGTGGCTCCATATTG+AGG | + | chr8_3:63051876-63051895 | None:intergenic | 45.0% | |
| GTTTAGATGAGGCCTGTGTA+AGG | + | chr8_3:63051936-63051955 | None:intergenic | 45.0% | |
| TCTAGCTATCTATGGCACAC+AGG | + | chr8_3:63052045-63052064 | None:intergenic | 45.0% | |
| GCGTTAACAGTGACCAATCA+GGG | + | chr8_3:63052164-63052183 | None:intergenic | 45.0% | |
| TGCGTTAACAGTGACCAATC+AGG | + | chr8_3:63052165-63052184 | None:intergenic | 45.0% | |
| GTCACTGTTAACGCATTAGC+AGG | - | chr8_3:63052170-63052189 | Msa1301120:five_prime_UTR | 45.0% | |
| CAGTTTCCATTCCCTGTACA+TGG | - | chr8_3:63052224-63052243 | Msa1301120:five_prime_UTR | 45.0% | |
| TTTCCATTCCCTGTACATGG+TGG | - | chr8_3:63052227-63052246 | Msa1301120:five_prime_UTR | 45.0% | |
| TTCCATTCCCTGTACATGGT+GGG | - | chr8_3:63052228-63052247 | Msa1301120:five_prime_UTR | 45.0% | |
| ACTCCACCCTCCACTTATAG+GGG | - | chr8_3:63046193-63046212 | Msa1301120:three_prime_UTR | 50.0% | |
| ! | TGCTTCGTTTGGTTGGTCGT+CGG | + | chr8_3:63046386-63046405 | None:intergenic | 50.0% |
| AGCTGCTTGCTTCGTTTGGT+TGG | + | chr8_3:63046393-63046412 | None:intergenic | 50.0% | |
| GAGAGGGAGAATATGTCTGG+TGG | - | chr8_3:63047027-63047046 | Msa1301120:intron | 50.0% | |
| GGACACCACTACTGTCTCAT+TGG | - | chr8_3:63047089-63047108 | Msa1301120:intron | 50.0% | |
| AGCTGGGCGTTCAACATGAT+TGG | + | chr8_3:63047267-63047286 | None:intergenic | 50.0% | |
| TCATGTTGAACGCCCAGCTA+AGG | - | chr8_3:63047268-63047287 | Msa1301120:intron | 50.0% | |
| CGATCTCAGCTACAAGACCT+AGG | - | chr8_3:63047636-63047655 | Msa1301120:intron | 50.0% | |
| ! | AGCGAGAGCATGGATGCAAT+AGG | + | chr8_3:63047672-63047691 | None:intergenic | 50.0% |
| ATTGCATCCATGCTCTCGCT+AGG | - | chr8_3:63047672-63047691 | Msa1301120:intron | 50.0% | |
| ATAATCGCCTAGCGAGAGCA+TGG | + | chr8_3:63047682-63047701 | None:intergenic | 50.0% | |
| ATCTTCAGCGGTGAGGACAT+TGG | + | chr8_3:63047905-63047924 | None:intergenic | 50.0% | |
| TTGTCATTCACCGTGCTCTG+AGG | - | chr8_3:63048276-63048295 | Msa1301120:intron | 50.0% | |
| TGTCATTCACCGTGCTCTGA+GGG | - | chr8_3:63048277-63048296 | Msa1301120:intron | 50.0% | |
| TTTCGTATGCTGCAGCCACA+AGG | - | chr8_3:63048999-63049018 | Msa1301120:intron | 50.0% | |
| CTATGTCAAAGATGCTCCCC+AGG | - | chr8_3:63049656-63049675 | Msa1301120:CDS | 50.0% | |
| CCTTTCGAACTATTGCTCCC+TGG | + | chr8_3:63049677-63049696 | None:intergenic | 50.0% | |
| CCAGGGAGCAATAGTTCGAA+AGG | - | chr8_3:63049674-63049693 | Msa1301120:CDS | 50.0% | |
| ACTTTCACAGGTTCAGACGG+TGG | + | chr8_3:63050121-63050140 | None:intergenic | 50.0% | |
| ! | AGATCAGGTGGTGGTTGTAC+TGG | + | chr8_3:63050154-63050173 | None:intergenic | 50.0% |
| !! | TTGGCTTTAGCCATCGTTCC+CGG | - | chr8_3:63050354-63050373 | Msa1301120:intron | 50.0% |
| TGCATGTTTGACGATGTCGC+TGG | + | chr8_3:63050677-63050696 | None:intergenic | 50.0% | |
| TGCTGCAGCAGCTAGCAAAT+TGG | - | chr8_3:63051098-63051117 | Msa1301120:intron | 50.0% | |
| TTTCTTCCTCAATGCCCCCT+TGG | - | chr8_3:63051126-63051145 | Msa1301120:intron | 50.0% | |
| !! | AAGATACCAAGGGGGCATTG+AGG | + | chr8_3:63051135-63051154 | None:intergenic | 50.0% |
| GGCCTATTTGGTATTCAGGC+TGG | - | chr8_3:63051573-63051592 | Msa1301120:intron | 50.0% | |
| TGGTATTCAGGCTGGAGGTT+TGG | - | chr8_3:63051581-63051600 | Msa1301120:intron | 50.0% | |
| TAATCCATGGGAGCAAGCAC+CGG | - | chr8_3:63051668-63051687 | Msa1301120:intron | 50.0% | |
| ! | GCTGCCATTTGAACAGAGTG+TGG | + | chr8_3:63051756-63051775 | None:intergenic | 50.0% |
| ACAGGCATACCTGAGCCATA+GGG | + | chr8_3:63051900-63051919 | None:intergenic | 50.0% | |
| AACAGGCATACCTGAGCCAT+AGG | + | chr8_3:63051901-63051920 | None:intergenic | 50.0% | |
| TCCGCATTTGGTTGTATGCG+TGG | - | chr8_3:63051991-63052010 | Msa1301120:five_prime_UTR | 50.0% | |
| CCCACGCATACAACCAAATG+CGG | + | chr8_3:63051995-63052014 | None:intergenic | 50.0% | |
| CCGCATTTGGTTGTATGCGT+GGG | - | chr8_3:63051992-63052011 | Msa1301120:five_prime_UTR | 50.0% | |
| TTCCCACCATGTACAGGGAA+TGG | + | chr8_3:63052233-63052252 | None:intergenic | 50.0% | |
| GAACCCCTATAAGTGGAGGG+TGG | + | chr8_3:63046199-63046218 | None:intergenic | 55.0% | |
| CAATAGGCAACGTCAGCCCT+AGG | + | chr8_3:63047656-63047675 | None:intergenic | 55.0% | |
| GTCCTCACCGCTGAAGATTG+TGG | - | chr8_3:63047907-63047926 | Msa1301120:intron | 55.0% | |
| AGCCACAATCTTCAGCGGTG+AGG | + | chr8_3:63047912-63047931 | None:intergenic | 55.0% | |
| ATACAGAAGGGTTGGGCTGC+AGG | - | chr8_3:63049335-63049354 | Msa1301120:CDS | 55.0% | |
| ACTCTGACAGTCTCTCAGCC+TGG | + | chr8_3:63049443-63049462 | None:intergenic | 55.0% | |
| GCACGTTCCTCCTTCACTTC+TGG | + | chr8_3:63050085-63050104 | None:intergenic | 55.0% | |
| TCACAGGTTCAGACGGTGGA+GGG | + | chr8_3:63050117-63050136 | None:intergenic | 55.0% | |
| TTCACAGGTTCAGACGGTGG+AGG | + | chr8_3:63050118-63050137 | None:intergenic | 55.0% | |
| ! | TCAGGTGGTGGTTGTACTGG+TGG | + | chr8_3:63050151-63050170 | None:intergenic | 55.0% |
| AACTCTGCAGCAGCTGGAAC+AGG | + | chr8_3:63050318-63050337 | None:intergenic | 55.0% | |
| TGTTCCAGCTGCTGCAGAGT+TGG | - | chr8_3:63050317-63050336 | Msa1301120:intron | 55.0% | |
| TCTTCCAACTCTGCAGCAGC+TGG | + | chr8_3:63050324-63050343 | None:intergenic | 55.0% | |
| GGGAACGATGGCTAAAGCCA+AGG | + | chr8_3:63050355-63050374 | None:intergenic | 55.0% | |
| ATGCAAATGGAACCGCTGGG+TGG | - | chr8_3:63051037-63051056 | Msa1301120:intron | 55.0% | |
| TGCAAATGGAACCGCTGGGT+GGG | - | chr8_3:63051038-63051057 | Msa1301120:intron | 55.0% | |
| AAGAGCCAATTCCCACCCAG+CGG | + | chr8_3:63051052-63051071 | None:intergenic | 55.0% | |
| TGAGCCATAGGGGTGAACTG+TGG | + | chr8_3:63051889-63051908 | None:intergenic | 55.0% | |
| ACAGTTCACCCCTATGGCTC+AGG | - | chr8_3:63051888-63051907 | Msa1301120:five_prime_UTR | 55.0% | |
| CAGGCATACCTGAGCCATAG+GGG | + | chr8_3:63051899-63051918 | None:intergenic | 55.0% | |
| !! | CATTCACCGTGCTCTGAGGG+AGG | - | chr8_3:63048280-63048299 | Msa1301120:intron | 60.0% |
| GATCCACCTCCCTCAGAGCA+CGG | + | chr8_3:63048289-63048308 | None:intergenic | 60.0% | |
| ACAGGTTCAGACGGTGGAGG+GGG | + | chr8_3:63050115-63050134 | None:intergenic | 60.0% | |
| CACAGGTTCAGACGGTGGAG+GGG | + | chr8_3:63050116-63050135 | None:intergenic | 60.0% | |
| TGGAACCGCTGGGTGGGAAT+TGG | - | chr8_3:63051044-63051063 | Msa1301120:intron | 60.0% | |
| GGTTGCATCATGCCTCCAGC+CGG | + | chr8_3:63051690-63051709 | None:intergenic | 60.0% | |
| GGAGCCACAGTTCACCCCTA+TGG | - | chr8_3:63051882-63051901 | Msa1301120:intron | 60.0% | |
| !! | TCACCGTGCTCTGAGGGAGG+TGG | - | chr8_3:63048283-63048302 | Msa1301120:intron | 65.0% |
| TCAGACGGTGGAGGGGGCGA+GGG | + | chr8_3:63050109-63050128 | None:intergenic | 70.0% | |
| TTCAGACGGTGGAGGGGGCG+AGG | + | chr8_3:63050110-63050129 | None:intergenic | 70.0% | |
| CCAGCCGGTGCTTGCTCCCA+TGG | + | chr8_3:63051675-63051694 | None:intergenic | 70.0% | |
| !! | CCATGGGAGCAAGCACCGGC+TGG | - | chr8_3:63051672-63051691 | Msa1301120:intron | 70.0% |
| !! | TGGGAGCAAGCACCGGCTGG+AGG | - | chr8_3:63051675-63051694 | Msa1301120:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 63046141 | 63052383 | 63046141 | ID=Msa1301120;Name=Msa1301120 |
| chr8_3 | mRNA | 63046141 | 63052383 | 63046141 | ID=Msa1301120-mRNA-1;Parent=Msa1301120;Name=Msa1301120-mRNA-1;_AED=0.08;_eAED=0.08;_QI=527|1|1|1|0.93|0.93|16|430|545 |
| chr8_3 | exon | 63046141 | 63046933 | 63046141 | ID=Msa1301120-mRNA-1:exon:18781;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63047405 | 63047517 | 63047405 | ID=Msa1301120-mRNA-1:exon:18780;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63048149 | 63048221 | 63048149 | ID=Msa1301120-mRNA-1:exon:18779;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63048347 | 63048502 | 63048347 | ID=Msa1301120-mRNA-1:exon:18778;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63048823 | 63048900 | 63048823 | ID=Msa1301120-mRNA-1:exon:18777;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63049000 | 63049080 | 63049000 | ID=Msa1301120-mRNA-1:exon:18776;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63049168 | 63049233 | 63049168 | ID=Msa1301120-mRNA-1:exon:18775;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63049310 | 63049375 | 63049310 | ID=Msa1301120-mRNA-1:exon:18774;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63049460 | 63049510 | 63049460 | ID=Msa1301120-mRNA-1:exon:18773;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63049611 | 63049694 | 63049611 | ID=Msa1301120-mRNA-1:exon:18772;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63049943 | 63050043 | 63049943 | ID=Msa1301120-mRNA-1:exon:18771;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63050126 | 63050267 | 63050126 | ID=Msa1301120-mRNA-1:exon:18770;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63050803 | 63050900 | 63050803 | ID=Msa1301120-mRNA-1:exon:18769;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63051219 | 63051288 | 63051219 | ID=Msa1301120-mRNA-1:exon:18768;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63051390 | 63051511 | 63051390 | ID=Msa1301120-mRNA-1:exon:18767;Parent=Msa1301120-mRNA-1 |
| chr8_3 | exon | 63051883 | 63052383 | 63051883 | ID=Msa1301120-mRNA-1:exon:18766;Parent=Msa1301120-mRNA-1 |
| chr8_3 | five_prime_UTR | 63051883 | 63052383 | 63051883 | ID=Msa1301120-mRNA-1:five_prime_utr;Parent=Msa1301120-mRNA-1 |
| chr8_3 | five_prime_UTR | 63051486 | 63051511 | 63051486 | ID=Msa1301120-mRNA-1:five_prime_utr;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63051390 | 63051485 | 63051390 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63051219 | 63051288 | 63051219 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63050803 | 63050900 | 63050803 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63050126 | 63050267 | 63050126 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63049943 | 63050043 | 63049943 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63049611 | 63049694 | 63049611 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63049460 | 63049510 | 63049460 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63049310 | 63049375 | 63049310 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63049168 | 63049233 | 63049168 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63049000 | 63049080 | 63049000 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63048823 | 63048900 | 63048823 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63048347 | 63048502 | 63048347 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63048149 | 63048221 | 63048149 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63047405 | 63047517 | 63047405 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | CDS | 63046571 | 63046933 | 63046571 | ID=Msa1301120-mRNA-1:cds;Parent=Msa1301120-mRNA-1 |
| chr8_3 | three_prime_UTR | 63046141 | 63046570 | 63046141 | ID=Msa1301120-mRNA-1:three_prime_utr;Parent=Msa1301120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
