AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387040 MtrunA17_Chr3g0145171 94.330 194 11 0 234 427 84 277 1.47e-134 390
Msa0387040 MtrunA17_Chr3g0145171 92.857 84 5 1 5 88 2 84 1.79e-44 158
Msa0387040 MtrunA17_Chr8g0370721 79.793 193 39 0 235 427 85 277 1.26e-112 334
Msa0387040 MtrunA17_Chr8g0370721 74.074 81 20 1 7 87 4 83 2.67e-30 120
Msa0387040 MtrunA17_Chr8g0370711 80.829 193 37 0 235 427 85 277 1.51e-112 334
Msa0387040 MtrunA17_Chr8g0370711 75.309 81 19 1 7 87 4 83 1.85e-32 125
Msa0387040 MtrunA17_Chr3g0145181 73.846 195 48 2 235 427 84 277 2.00e-100 303
Msa0387040 MtrunA17_Chr3g0145181 60.256 78 27 2 14 89 9 84 2.34e-17 83.2
Msa0387040 MtrunA17_Chr3g0145201 73.846 195 48 2 235 427 719 912 4.11e-94 304
Msa0387040 MtrunA17_Chr4g0064781 51.598 219 97 2 210 427 61 271 8.94e-76 240
Msa0387040 MtrunA17_Chr7g0232161 41.753 194 112 1 234 427 90 282 3.89e-53 180
Msa0387040 MtrunA17_Chr2g0296371 47.179 195 101 2 234 427 84 277 1.13e-52 180
Msa0387040 MtrunA17_Chr8g0375681 42.233 206 118 1 222 427 2 206 2.51e-51 174
Msa0387040 MtrunA17_Chr5g0423221 41.753 194 113 0 234 427 101 294 2.18e-50 174
Msa0387040 MtrunA17_Chr7g0239111 41.753 194 112 1 234 427 85 277 7.61e-50 172
Msa0387040 MtrunA17_Chr5g0420981 40.206 194 115 1 234 427 84 276 1.07e-49 172
Msa0387040 MtrunA17_Chr8g0365241 40.104 192 114 1 236 427 90 280 9.78e-49 170
Msa0387040 MtrunA17_Chr5g0423251 41.753 194 112 1 234 427 77 269 1.29e-48 169
Msa0387040 MtrunA17_Chr5g0423191 41.753 194 112 1 234 427 77 269 6.76e-48 167
Msa0387040 MtrunA17_Chr2g0314401 41.146 192 112 1 236 427 85 275 2.75e-47 166
Msa0387040 MtrunA17_Chr5g0421101 40.206 194 115 1 234 427 77 269 4.49e-47 165
Msa0387040 MtrunA17_Chr7g0239101 38.542 192 117 1 236 427 87 277 8.07e-47 164
Msa0387040 MtrunA17_Chr2g0314381 39.691 194 116 1 234 427 109 301 1.35e-46 164
Msa0387040 MtrunA17_Chr7g0239071 39.109 202 106 4 234 427 30 222 1.92e-46 162
Msa0387040 MtrunA17_Chr5g0421011 40.206 194 115 1 234 427 77 269 2.24e-46 163
Msa0387040 MtrunA17_Chr2g0314391 41.753 194 112 1 234 427 102 294 4.37e-46 163
Msa0387040 MtrunA17_Chr3g0087031 42.708 192 107 2 236 427 94 282 5.03e-46 162
Msa0387040 MtrunA17_Chr8g0375671 39.583 192 115 1 236 427 88 278 6.68e-46 162
Msa0387040 MtrunA17_Chr7g0239821 38.144 194 119 1 234 427 94 286 1.16e-45 162
Msa0387040 MtrunA17_Chr7g0239121 36.788 193 120 2 236 427 83 274 3.09e-45 160
Msa0387040 MtrunA17_Chr8g0375601 40.104 192 114 1 236 427 83 273 1.37e-44 159
Msa0387040 MtrunA17_Chr5g0421041 39.583 192 115 1 236 427 77 267 1.91e-44 158
Msa0387040 MtrunA17_Chr5g0420941 39.583 192 115 1 236 427 77 267 3.32e-44 157
Msa0387040 MtrunA17_Chr5g0423201 39.487 195 116 2 234 427 77 270 7.07e-44 157
Msa0387040 MtrunA17_Chr2g0314371 37.615 218 113 2 234 429 84 300 7.60e-44 156
Msa0387040 MtrunA17_Chr7g0242551 37.245 196 121 1 234 427 88 283 1.83e-43 155
Msa0387040 MtrunA17_Chr5g0420951 38.021 192 118 1 236 427 86 276 3.45e-43 155
Msa0387040 MtrunA17_Chr5g0424201 38.974 195 115 3 236 427 74 267 4.08e-43 154
Msa0387040 MtrunA17_Chr8g0375701 40.404 198 108 3 234 427 85 276 1.21e-42 153
Msa0387040 MtrunA17_Chr4g0006371 35.484 248 139 5 195 427 50 291 1.94e-42 153
Msa0387040 MtrunA17_Chr5g0421091 38.144 194 120 0 234 427 75 268 1.06e-41 150
Msa0387040 MtrunA17_Chr5g0398291 36.735 196 119 3 236 427 83 277 2.03e-41 150
Msa0387040 MtrunA17_Chr3g0114871 38.384 198 116 4 234 427 70 265 2.24e-41 148
Msa0387040 MtrunA17_Chr1g0162191 39.062 192 116 1 236 427 81 271 2.26e-41 150
Msa0387040 MtrunA17_Chr5g0420901 37.113 194 121 1 234 427 76 268 4.31e-41 149
Msa0387040 MtrunA17_Chr8g0375571 35.938 192 122 1 236 427 81 271 5.59e-41 149
Msa0387040 MtrunA17_Chr5g0420721 40.828 169 99 1 259 427 4 171 1.34e-40 145
Msa0387040 MtrunA17_Chr3g0113641 37.306 193 120 1 236 427 86 278 6.27e-40 146
Msa0387040 MtrunA17_Chr5g0437181 37.113 194 119 2 236 427 85 277 7.54e-40 146
Msa0387040 MtrunA17_Chr5g0424211 35.135 222 134 4 211 427 51 267 4.31e-38 140
Msa0387040 MtrunA17_Chr3g0114861 36.923 195 117 4 237 427 70 262 9.95e-38 139
Msa0387040 MtrunA17_Chr4g0064771 39.894 188 61 1 240 427 1 136 5.12e-37 134
Msa0387040 MtrunA17_Chr3g0128001 37.949 195 118 3 234 427 66 258 6.77e-37 137
Msa0387040 MtrunA17_Chr5g0423211 31.980 197 130 2 234 427 77 272 1.16e-32 126
Msa0387040 MtrunA17_Chr1g0179801 35.821 201 119 5 234 427 97 294 1.39e-32 127
Msa0387040 MtrunA17_Chr6g0455481 35.545 211 122 6 224 427 60 263 1.83e-32 125
Msa0387040 MtrunA17_Chr3g0102041 32.292 192 126 3 234 423 72 261 3.00e-32 125
Msa0387040 MtrunA17_Chr8g0371931 35.938 192 119 3 234 423 72 261 3.17e-32 125
Msa0387040 MtrunA17_Chr8g0345831 36.923 195 119 4 234 427 73 264 7.64e-32 124
Msa0387040 MtrunA17_Chr3g0109041 36.000 200 117 6 237 427 76 273 1.37e-31 123
Msa0387040 MtrunA17_Chr2g0289341 34.518 197 118 5 234 427 35 223 8.21e-31 120
Msa0387040 MtrunA17_Chr5g0405411 34.211 190 121 3 236 423 74 261 2.73e-30 120
Msa0387040 MtrunA17_Chr5g0412671 37.688 199 116 6 234 427 71 266 9.39e-30 118
Msa0387040 MtrunA17_Chr8g0371921 34.211 190 121 3 236 423 74 261 1.34e-29 118
Msa0387040 MtrunA17_Chr2g0332191 34.158 202 121 6 234 427 77 274 1.37e-29 118
Msa0387040 MtrunA17_Chr3g0125201 32.143 196 122 2 236 427 36 224 1.71e-29 116
Msa0387040 MtrunA17_Chr7g0239091 35.567 194 114 3 234 427 190 372 3.32e-29 118
Msa0387040 MtrunA17_Chr5g0426891 35.385 195 116 5 236 427 75 262 7.07e-29 115
Msa0387040 MtrunA17_Chr5g0412651 36.181 199 119 5 234 427 71 266 1.21e-28 115
Msa0387040 MtrunA17_Chr7g0265221 32.683 205 122 5 236 427 100 301 2.12e-28 115
Msa0387040 MtrunA17_Chr3g0121141 32.308 195 121 5 236 427 37 223 3.89e-26 107
Msa0387040 MtrunA17_Chr3g0126741 32.990 194 121 5 237 427 96 283 6.75e-26 107
Msa0387040 MtrunA17_Chr4g0045471 35.545 211 114 8 234 427 63 268 9.57e-26 107
Msa0387040 MtrunA17_Chr1g0162351 34.286 210 117 7 234 427 108 312 1.57e-25 107
Msa0387040 MtrunA17_Chr2g0311711 29.688 256 157 7 189 427 39 288 1.60e-25 107
Msa0387040 MtrunA17_Chr5g0412681 33.838 198 125 3 234 427 58 253 1.86e-25 106
Msa0387040 MtrunA17_Chr5g0439011 31.795 195 122 5 236 427 38 224 3.09e-25 105
Msa0387040 MtrunA17_Chr7g0220011 31.313 198 127 5 234 427 67 259 4.48e-25 105
Msa0387040 MtrunA17_Chr1g0184161 30.928 194 128 5 236 427 71 260 4.57e-25 105
Msa0387040 MtrunA17_Chr4g0045441 37.321 209 112 8 234 427 63 267 4.98e-25 105
Msa0387040 MtrunA17_Chr1g0162321 33.810 210 118 7 234 427 108 312 5.25e-25 105
Msa0387040 MtrunA17_Chr8g0354261 32.143 196 124 5 234 427 103 291 7.69e-25 105
Msa0387040 MtrunA17_Chr2g0311921 31.156 199 123 4 234 427 87 276 2.30e-24 103
Msa0387040 MtrunA17_Chr7g0220001 31.122 196 130 4 234 427 69 261 2.77e-24 102
Msa0387040 MtrunA17_Chr7g0250511 30.102 196 131 5 234 427 81 272 3.63e-24 102
Msa0387040 MtrunA17_Chr4g0011311 33.333 195 123 4 234 427 100 288 1.12e-23 100
Msa0387040 MtrunA17_Chr1g0187831 31.795 195 126 5 234 427 103 291 1.25e-23 102
Msa0387040 MtrunA17_Chr2g0311681 33.503 197 120 5 234 427 96 284 1.32e-23 101
Msa0387040 MtrunA17_Chr4g0050031 30.928 194 125 4 237 427 99 286 1.36e-23 101
Msa0387040 MtrunA17_Chr1g0184121 32.663 199 123 6 234 427 68 260 1.68e-23 100
Msa0387040 MtrunA17_Chr1g0184101 32.653 196 126 5 234 427 69 260 2.09e-23 100
Msa0387040 MtrunA17_Chr1g0184151 29.082 196 133 5 234 427 69 260 2.13e-23 100
Msa0387040 MtrunA17_Chr1g0184111 34.673 199 119 7 234 427 68 260 2.48e-23 100
Msa0387040 MtrunA17_Chr6g0474391 30.500 200 126 4 235 425 99 294 4.24e-23 100
Msa0387040 MtrunA17_Chr4g0045451 35.885 209 115 8 234 427 63 267 6.45e-23 99.4
Msa0387040 MtrunA17_Chr8g0351101 32.828 198 123 5 235 425 89 283 7.61e-23 99.4
Msa0387040 MtrunA17_Chr8g0354241 30.653 199 123 5 234 427 103 291 1.21e-22 99.0
Msa0387040 MtrunA17_Chr8g0362741 32.308 195 124 5 234 427 86 273 2.75e-22 96.3
Msa0387040 MtrunA17_Chr8g0336751 31.282 195 127 4 234 427 127 315 3.11e-22 97.8
Msa0387040 MtrunA17_Chr8g0336761 29.146 199 126 5 234 427 94 282 3.12e-22 97.4
Msa0387040 MtrunA17_Chr1g0162361 35.407 209 116 7 234 427 55 259 4.29e-22 96.7
Msa0387040 MtrunA17_Chr4g0045411 33.659 205 119 7 234 427 68 266 4.81e-22 96.7
Msa0387040 MtrunA17_Chr2g0311691 32.995 197 121 5 234 427 96 284 5.25e-22 97.1
Msa0387040 MtrunA17_Chr2g0311701 31.795 195 126 4 234 427 102 290 7.95e-22 96.7
Msa0387040 MtrunA17_Chr8g0336781 30.612 196 128 5 234 427 129 318 8.49e-22 96.7
Msa0387040 MtrunA17_Chr2g0311741 31.156 199 122 5 234 427 60 248 8.67e-22 95.5
Msa0387040 MtrunA17_Chr3g0125421 32.500 200 124 5 234 425 70 266 1.79e-21 95.1
Msa0387040 MtrunA17_Chr1g0167911 27.876 226 146 7 207 427 61 274 2.87e-21 94.7
Msa0387040 MtrunA17_Chr8g0336851 28.643 199 127 5 234 427 94 282 3.03e-21 94.7
Msa0387040 MtrunA17_Chr2g0319491 29.744 195 120 6 234 423 66 248 4.59e-21 93.6
Msa0387040 MtrunA17_Chr1g0167961 31.156 199 120 6 234 426 102 289 6.13e-21 94.0
Msa0387040 MtrunA17_Chr2g0311761 30.653 199 124 4 234 427 101 290 7.21e-21 93.6
Msa0387040 MtrunA17_Chr5g0420881 55.385 65 29 0 363 427 1 65 9.15e-21 88.6
Msa0387040 MtrunA17_Chr7g0235981 29.843 191 128 3 237 427 58 242 1.01e-20 92.4
Msa0387040 MtrunA17_Chr1g0148771 30.570 193 129 4 237 427 91 280 1.40e-20 92.4
Msa0387040 MtrunA17_Chr7g0235951 31.156 199 122 5 234 427 100 288 1.61e-20 92.8
Msa0387040 MtrunA17_Chr3g0130391 31.472 197 126 4 234 423 100 294 2.82e-20 92.0
Msa0387040 MtrunA17_Chr1g0204181 29.648 199 129 5 235 425 94 289 3.93e-20 91.7
Msa0387040 MtrunA17_Chr4g0066121 30.000 200 124 6 234 427 94 283 4.05e-20 91.3
Msa0387040 MtrunA17_Chr1g0187821 29.146 199 126 5 234 427 100 288 4.26e-20 91.3
Msa0387040 MtrunA17_Chr7g0225881 28.182 220 146 7 212 427 74 285 4.51e-20 91.3
Msa0387040 MtrunA17_Chr3g0093761 34.021 194 121 5 236 427 86 274 7.04e-20 90.5
Msa0387040 MtrunA17_Chr2g0311831 30.151 199 124 5 234 427 101 289 1.77e-19 89.7
Msa0387040 MtrunA17_Chr8g0336861 28.141 199 129 5 234 427 94 283 2.28e-19 89.4
Msa0387040 MtrunA17_Chr4g0055591 28.718 195 132 4 234 427 89 277 3.57e-19 88.6
Msa0387040 MtrunA17_Chr8g0364471 29.231 195 131 4 234 427 100 288 5.71e-19 88.2
Msa0387040 MtrunA17_Chr4g0045431 33.654 208 121 7 234 427 63 267 5.83e-19 87.8
Msa0387040 MtrunA17_Chr8g0348081 27.638 199 129 5 234 427 94 282 7.03e-19 87.8
Msa0387040 MtrunA17_Chr8g0375581 43.529 85 45 1 339 423 4 85 7.71e-19 80.9
Msa0387040 MtrunA17_Chr4g0053251 30.198 202 128 6 237 427 52 251 9.31e-19 86.7
Msa0387040 MtrunA17_Chr2g0319521 35.398 113 71 2 315 427 14 124 1.11e-18 82.0
Msa0387040 MtrunA17_Chr6g0472861 28.788 198 130 6 234 427 100 290 1.18e-18 87.0
Msa0387040 MtrunA17_Chr3g0093741 27.969 261 174 7 170 427 26 275 1.19e-18 87.0
Msa0387040 MtrunA17_Chr8g0358941 29.808 208 127 8 234 427 52 254 1.20e-18 86.7
Msa0387040 MtrunA17_Chr8g0364171 37.838 111 67 2 317 427 18 126 1.29e-18 82.0
Msa0387040 MtrunA17_Chr2g0311861 31.088 193 113 6 245 427 83 265 1.45e-18 86.7
Msa0387040 MtrunA17_Chr2g0311631 30.049 203 127 6 234 427 86 282 1.76e-18 86.7
Msa0387040 MtrunA17_Chr6g0488511 27.551 196 129 4 237 427 37 224 2.07e-18 85.5
Msa0387040 MtrunA17_Chr8g0336631 27.000 200 130 5 234 427 94 283 2.73e-18 85.9
Msa0387040 MtrunA17_Chr7g0265351 30.000 220 142 7 211 427 48 258 3.04e-18 85.5
Msa0387040 MtrunA17_Chr5g0394071 37.615 109 66 2 318 426 3 109 5.11e-18 81.6
Msa0387040 MtrunA17_Chr3g0093751 32.821 195 123 6 236 427 86 275 1.27e-17 84.0
Msa0387040 MtrunA17_Chr1g0167951 28.283 198 128 4 234 427 86 273 1.50e-17 83.6
Msa0387040 MtrunA17_Chr1g0184241 29.798 198 126 6 234 427 100 288 1.55e-17 83.6
Msa0387040 MtrunA17_Chr4g0075471 51.515 66 32 0 362 427 28 93 2.01e-17 79.3
Msa0387040 MtrunA17_Chr1g0187811 27.638 199 129 5 234 427 221 409 2.44e-17 84.0
Msa0387040 MtrunA17_Chr8g0384461 28.502 207 125 6 234 427 81 277 2.54e-17 83.2
Msa0387040 MtrunA17_Chr2g0313111 29.851 201 128 8 234 427 53 247 2.86e-17 82.4
Msa0387040 MtrunA17_Chr1g0191201 29.557 203 126 5 234 425 87 283 3.76e-17 82.8
Msa0387040 MtrunA17_Chr8g0384481 42.453 106 58 3 321 425 183 286 5.05e-17 82.4
Msa0387040 MtrunA17_Chr7g0236011 31.658 199 121 5 234 427 100 288 6.64e-17 82.0
Msa0387040 MtrunA17_Chr4g0045461 34.783 207 119 8 234 427 63 266 1.17e-16 81.3
Msa0387040 MtrunA17_Chr2g0285931 27.670 206 133 8 234 427 53 254 1.43e-16 80.5
Msa0387040 MtrunA17_Chr7g0266651 29.381 194 128 5 236 427 93 279 3.33e-16 79.7
Msa0387040 MtrunA17_Chr3g0126761 36.036 111 69 2 317 426 44 153 4.47e-16 77.4
Msa0387040 MtrunA17_Chr8g0375661 32.174 115 71 1 203 317 62 169 4.50e-16 75.9
Msa0387040 MtrunA17_Chr1g0161041 30.457 197 126 5 234 427 126 314 4.86e-16 79.3
Msa0387040 MtrunA17_Chr1g0161111 30.769 195 128 4 234 427 162 350 6.02e-16 79.3
Msa0387040 MtrunA17_Chr1g0161081 29.231 195 131 4 234 427 103 291 1.40e-15 77.8
Msa0387040 MtrunA17_Chr8g0375641 37.647 85 53 0 236 320 88 172 2.12e-15 74.3
Msa0387040 MtrunA17_Chr1g0167931 36.066 122 70 4 310 426 117 235 3.20e-15 76.3
Msa0387040 MtrunA17_Chr7g0233661 41.463 82 47 1 346 427 4 84 4.20e-15 72.8
Msa0387040 MtrunA17_Chr3g0092531 32.161 199 118 9 234 427 41 227 8.96e-15 74.7
Msa0387040 MtrunA17_Chr1g0170631 35.398 113 68 3 317 427 3 112 1.52e-14 72.0
Msa0387040 MtrunA17_Chr4g0037611 38.462 91 53 3 338 427 12 100 4.22e-14 70.5
Msa0387040 MtrunA17_Chr2g0311611 48.611 72 29 2 363 427 1 71 1.39e-13 65.5
Msa0387040 MtrunA17_Chr7g0219991 36.893 103 63 1 320 422 251 351 2.21e-13 71.2
Msa0387040 MtrunA17_Chr7g0247991 27.638 199 129 5 234 427 100 288 2.88e-13 70.9
Msa0387040 MtrunA17_Chr6g0486831 29.907 214 126 10 235 426 50 261 3.91e-13 70.1
Msa0387040 MtrunA17_Chr3g0105281 27.451 204 129 5 234 427 58 252 5.83e-13 69.7
Msa0387040 MtrunA17_Chr8g0335411 29.016 193 130 5 236 427 102 288 9.11e-13 69.3
Msa0387040 MtrunA17_Chr4g0052251 25.980 204 137 9 234 427 54 253 1.15e-11 65.9
Msa0387040 MtrunA17_Chr4g0068891 27.404 208 125 8 234 427 47 242 1.24e-11 65.5
Msa0387040 MtrunA17_Chr4g0066991 29.801 151 92 4 281 427 128 268 5.16e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387040 AT1G49390.2 56.771 192 83 0 236 427 1 192 5.86e-80 248
Msa0387040 AT1G49390.1 56.186 194 85 0 234 427 78 271 2.55e-79 249
Msa0387040 AT5G54000.1 54.688 192 87 0 236 427 1 192 1.25e-75 237
Msa0387040 AT5G20400.1 55.155 194 87 0 234 427 78 271 2.78e-75 239
Msa0387040 AT5G54000.2 54.124 194 89 0 234 427 79 272 5.70e-75 238
Msa0387040 AT5G20550.1 54.872 195 87 1 234 427 78 272 8.21e-75 238
Msa0387040 AT3G21420.1 48.718 195 98 2 234 427 89 282 5.90e-55 186
Msa0387040 AT4G25310.1 42.857 196 101 3 236 427 86 274 4.55e-49 171
Msa0387040 AT4G25300.1 41.837 196 106 2 236 427 86 277 2.15e-48 169
Msa0387040 AT1G17020.1 39.896 193 115 1 236 427 87 279 5.15e-48 168
Msa0387040 AT2G38240.1 38.265 196 119 1 234 427 77 272 1.27e-46 164
Msa0387040 AT1G17010.1 39.062 192 117 0 236 427 88 279 6.54e-46 162
Msa0387040 AT5G05600.2 38.462 195 119 1 234 427 96 290 5.42e-44 155
Msa0387040 AT5G05600.1 37.949 195 120 1 234 427 96 290 2.11e-43 156
Msa0387040 AT1G78550.2 39.286 196 110 2 236 427 9 199 2.60e-42 150
Msa0387040 AT5G08640.2 38.776 196 114 4 234 425 71 264 5.96e-42 151
Msa0387040 AT5G08640.1 38.776 196 114 4 234 425 71 264 5.96e-42 151
Msa0387040 AT1G78550.1 39.286 196 110 2 236 427 87 277 1.86e-41 150
Msa0387040 AT4G22880.1 32.319 263 153 7 189 427 16 277 4.47e-41 149
Msa0387040 AT4G22880.2 32.319 263 153 7 189 427 16 277 4.47e-41 149
Msa0387040 AT4G22880.3 32.319 263 153 7 189 427 16 277 4.47e-41 149
Msa0387040 AT3G55970.2 34.081 223 144 2 208 427 60 282 9.24e-41 147
Msa0387040 AT3G55970.1 35.533 197 124 2 234 427 86 282 1.10e-39 146
Msa0387040 AT4G16330.2 35.088 228 136 7 205 427 69 289 8.28e-37 138
Msa0387040 AT3G11180.1 36.224 196 122 2 234 427 125 319 1.01e-36 139
Msa0387040 AT3G11180.2 36.224 196 122 2 234 427 125 319 1.98e-36 138
Msa0387040 AT4G10500.1 36.269 193 117 5 237 427 78 266 2.87e-34 131
Msa0387040 AT5G24530.1 35.385 195 123 3 234 427 66 258 3.22e-34 130
Msa0387040 AT2G36690.2 36.224 196 120 5 234 427 92 284 1.36e-33 129
Msa0387040 AT2G36690.1 36.224 196 120 5 234 427 92 284 1.36e-33 129
Msa0387040 AT4G16330.1 37.297 185 109 5 248 427 1 183 2.06e-33 126
Msa0387040 AT5G63580.2 35.714 196 120 4 235 427 48 240 2.56e-33 125
Msa0387040 AT5G63580.1 35.567 194 119 4 235 425 48 238 8.23e-33 124
Msa0387040 AT5G63600.2 32.821 195 125 4 234 427 61 250 6.60e-32 124
Msa0387040 AT5G63600.1 32.642 193 124 4 234 425 61 248 1.11e-31 123
Msa0387040 AT5G63590.1 32.653 196 126 4 234 425 42 235 2.21e-30 119
Msa0387040 AT4G25310.2 36.458 192 91 4 236 427 86 246 7.55e-30 118
Msa0387040 AT1G05010.1 34.518 197 118 4 234 427 35 223 1.11e-29 118
Msa0387040 AT4G10490.1 35.233 193 119 5 237 427 76 264 1.83e-29 118
Msa0387040 AT5G63595.1 31.959 194 108 4 234 425 53 224 2.00e-29 116
Msa0387040 AT3G19010.2 38.756 209 109 8 234 427 60 264 2.54e-29 116
Msa0387040 AT2G44800.1 35.176 199 117 6 234 427 84 275 2.91e-29 117
Msa0387040 AT3G19010.1 38.278 209 110 8 234 427 60 264 1.38e-28 115
Msa0387040 AT3G19010.4 38.278 209 110 8 234 427 60 264 1.38e-28 115
Msa0387040 AT3G60290.1 35.500 200 115 7 234 427 84 275 1.58e-28 115
Msa0387040 AT3G19000.2 36.842 209 113 7 234 427 65 269 2.62e-28 113
Msa0387040 AT3G19000.1 36.842 209 113 7 234 427 65 269 2.60e-27 112
Msa0387040 AT1G60980.1 33.166 199 121 4 237 425 94 290 2.73e-27 112
Msa0387040 AT3G51240.1 33.161 193 123 5 234 423 71 260 8.05e-27 110
Msa0387040 AT5G07480.1 31.905 210 115 6 234 427 77 274 2.59e-26 109
Msa0387040 AT4G25420.2 31.500 200 128 3 235 427 95 292 4.10e-26 107
Msa0387040 AT5G07200.1 34.010 197 120 4 237 425 95 289 4.19e-26 109
Msa0387040 AT3G51240.2 33.143 175 113 3 251 423 4 176 1.02e-25 105
Msa0387040 AT5G43935.1 32.828 198 100 7 236 425 49 221 1.04e-25 106
Msa0387040 AT5G43450.2 32.000 200 121 5 234 428 92 281 1.17e-25 106
Msa0387040 AT1G55290.1 33.838 198 122 5 234 427 90 282 1.39e-25 107
Msa0387040 AT1G77330.1 33.168 202 114 6 236 427 36 226 2.20e-25 105
Msa0387040 AT5G43450.1 32.161 199 120 5 234 427 92 280 3.31e-25 106
Msa0387040 AT1G62380.1 30.769 195 124 5 236 427 40 226 3.38e-25 105
Msa0387040 AT5G51810.2 32.500 200 126 4 235 427 93 290 4.84e-25 104
Msa0387040 AT4G25420.1 31.313 198 127 3 235 425 95 290 4.87e-25 106
Msa0387040 AT1G12010.1 31.795 195 122 5 236 427 40 226 5.21e-25 105
Msa0387040 AT1G15550.1 32.487 197 124 5 237 427 85 278 8.45e-25 105
Msa0387040 AT3G13610.1 33.668 199 121 6 234 427 90 282 9.16e-25 105
Msa0387040 AT4G25300.2 41.379 116 60 2 316 427 72 183 9.52e-25 102
Msa0387040 AT1G06645.1 32.821 195 121 5 234 427 111 296 2.59e-24 103
Msa0387040 AT5G43440.2 30.348 201 126 5 234 429 94 285 3.04e-24 102
Msa0387040 AT1G44090.1 33.673 196 122 4 236 425 99 292 3.35e-24 103
Msa0387040 AT1G06640.3 32.308 195 117 5 234 423 98 282 3.45e-24 102
Msa0387040 AT1G06620.2 29.796 245 153 7 191 427 50 283 4.01e-24 101
Msa0387040 AT1G06640.1 31.658 199 121 5 234 427 98 286 4.96e-24 103
Msa0387040 AT5G51810.1 32.323 198 125 4 235 425 93 288 5.09e-24 103
Msa0387040 AT1G06640.2 31.658 199 121 5 234 427 98 286 5.56e-24 102
Msa0387040 AT5G43440.1 30.653 199 124 5 234 427 94 283 9.36e-24 102
Msa0387040 AT1G06620.1 29.796 245 153 7 191 427 50 283 1.74e-23 101
Msa0387040 AT2G30830.1 31.282 195 127 4 234 427 88 276 9.03e-23 99.4
Msa0387040 AT3G61400.2 32.143 196 126 4 234 427 98 288 9.53e-23 98.2
Msa0387040 AT4G21200.1 31.937 191 119 5 234 423 76 256 1.03e-22 99.0
Msa0387040 AT1G06650.1 30.964 197 127 5 234 428 98 287 1.18e-22 98.2
Msa0387040 AT1G03410.2 31.633 196 126 5 234 427 90 279 1.61e-22 98.6
Msa0387040 AT1G03410.1 31.633 196 126 5 234 427 127 316 2.08e-22 99.0
Msa0387040 AT3G61400.1 31.633 196 127 4 234 427 98 288 4.94e-22 97.4
Msa0387040 AT1G80340.1 33.333 198 121 6 237 427 78 271 5.81e-22 96.7
Msa0387040 AT1G04380.2 29.851 201 126 5 234 429 75 265 1.15e-21 94.7
Msa0387040 AT1G06650.2 30.612 196 127 5 234 427 98 286 1.69e-21 95.9
Msa0387040 AT3G12900.1 29.293 198 129 7 234 427 87 277 2.31e-21 95.1
Msa0387040 AT1G80330.1 30.102 196 125 6 237 423 77 269 2.41e-21 95.1
Msa0387040 AT1G78440.1 30.918 207 124 9 234 427 43 243 6.63e-21 93.6
Msa0387040 AT5G07480.2 34.965 143 82 4 293 427 26 165 8.02e-21 91.7
Msa0387040 AT3G19010.3 33.971 209 89 8 234 427 60 234 9.90e-21 92.8
Msa0387040 AT1G04380.1 29.648 199 125 5 234 427 75 263 1.32e-20 92.8
Msa0387040 AT2G30840.2 29.381 194 130 4 234 426 92 279 1.33e-20 92.0
Msa0387040 AT2G30840.1 29.231 195 131 4 234 427 92 280 1.55e-20 92.8
Msa0387040 AT2G30840.3 29.381 194 130 4 234 426 92 279 2.27e-20 92.4
Msa0387040 AT5G59530.1 29.798 198 129 5 234 427 91 282 2.99e-20 92.0
Msa0387040 AT1G04350.1 28.500 200 127 6 234 427 88 277 3.57e-19 89.0
Msa0387040 AT5G59540.2 27.778 198 132 5 234 427 94 284 1.62e-18 85.9
Msa0387040 AT1G03400.2 30.570 193 127 4 236 427 83 269 8.01e-18 85.1
Msa0387040 AT1G03400.1 30.052 193 128 4 236 427 83 269 9.60e-18 84.7
Msa0387040 AT5G59540.1 27.273 198 133 5 234 427 94 284 1.42e-17 84.3
Msa0387040 AT2G25450.1 29.231 195 131 4 234 427 88 276 3.58e-17 82.8
Msa0387040 AT2G19590.2 27.411 197 125 7 237 427 30 214 3.85e-15 76.3
Msa0387040 AT4G21690.1 27.778 198 131 4 237 423 75 271 5.76e-15 76.3
Msa0387040 AT5G12270.1 27.586 203 127 5 236 427 86 279 6.56e-15 76.3
Msa0387040 AT2G19590.1 27.411 197 125 7 237 427 45 229 6.60e-15 75.5
Msa0387040 AT3G50210.4 27.885 208 135 6 235 427 50 257 9.20e-15 75.5
Msa0387040 AT3G50210.1 27.885 208 135 6 235 427 50 257 9.20e-15 75.5
Msa0387040 AT3G50210.3 27.885 208 135 6 235 427 50 257 9.20e-15 75.5
Msa0387040 AT1G30040.2 26.733 202 136 7 234 427 56 253 1.84e-14 73.6
Msa0387040 AT1G30040.1 26.733 202 136 7 234 427 56 253 4.29e-14 73.6
Msa0387040 AT3G49620.1 28.095 210 127 5 235 427 76 278 4.40e-14 73.6
Msa0387040 AT3G46500.7 28.922 204 129 9 237 426 48 249 2.40e-13 70.9
Msa0387040 AT3G46500.5 28.922 204 129 9 237 426 48 249 3.56e-13 70.5
Msa0387040 AT1G50960.1 30.088 113 77 2 314 426 150 260 3.77e-12 67.8

Find 103 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTGGGGATTGTTTC+AGG 0.048302 3_1:+90872166 Msa0387040:CDS
TGAGGAGGTGGGTGCTTGTT+GGG 0.222216 3_1:-90873417 None:intergenic
AACAATATACTGAAAGTTTA+AGG 0.224571 3_1:+90874555 Msa0387040:CDS
TCATTGTAGATATAATTATT+TGG 0.229365 3_1:-90872011 None:intergenic
TCCACTCTGCTCTCTCTTCT+TGG 0.263003 3_1:+90872153 Msa0387040:CDS
AATTATATCTACAATGAATT+AGG 0.265397 3_1:+90872017 Msa0387040:CDS
TTGTGTTGTTGCTTGTTTCT+TGG 0.276322 3_1:-90873602 None:intergenic
CAGAAAATCAAAAGCTTGAT+TGG 0.289170 3_1:+90874081 Msa0387040:CDS
TTGAAATTCCTCTGATCTTC+CGG 0.295977 3_1:-90874131 None:intergenic
GTGAGGAGGTGGGTGCTTGT+TGG 0.300976 3_1:-90873418 None:intergenic
CCACTCTGCTCTCTCTTCTT+GGG 0.307569 3_1:+90872154 Msa0387040:CDS
CCTATGCCTGATCATGTTCT+AGG 0.310348 3_1:+90874701 Msa0387040:CDS
CTCTCTCTCCACATTCCTTT+AGG 0.323173 3_1:-90874640 None:intergenic
GGGGTGGTGATGCGTGGTGG+TGG 0.337711 3_1:-90873488 None:intergenic
GTTTCTTGGTGAGGATGTTT+TGG 0.343191 3_1:-90873588 None:intergenic
TTAACTTAGAAGATAGTATC+AGG 0.350088 3_1:+90872270 Msa0387040:CDS
GAATTTATACCTGAAATCAT+TGG 0.353550 3_1:-90874171 None:intergenic
ATCAGAGGAATTTCAAACTT+TGG 0.357694 3_1:+90874138 Msa0387040:CDS
ACGAGAGCATCAGGGATTAT+TGG 0.359276 3_1:-90874824 None:intergenic
TGGTGGTGGTGAAGTGTGGT+GGG 0.359905 3_1:-90873474 None:intergenic
ACATTAATCACGAGAGCATC+AGG 0.364504 3_1:-90874833 None:intergenic
CCACAACCCAGATCATAAAA+AGG 0.365340 3_1:+90873692 Msa0387040:CDS
CCAAACGGTATTGAAGGATA+TGG 0.374061 3_1:+90874041 Msa0387040:CDS
TGATGATGTGTGTTGGTGGT+TGG 0.410370 3_1:-90873449 None:intergenic
GATGGCAGAATCGGTGGGTT+CGG 0.415598 3_1:+90871923 Msa0387040:exon
CCATATCCTTCAATACCGTT+TGG 0.420764 3_1:-90874041 None:intergenic
AGGTTATTCAATTGTGGTGG+GGG 0.420785 3_1:-90873507 None:intergenic
GGGGTGATGATGTGTGTTGG+TGG 0.428573 3_1:-90873453 None:intergenic
ATACTATCTTCTAAGTTAAG+AGG 0.432112 3_1:-90872266 None:intergenic
TCGGCAGAGGTTGATATAAT+CGG 0.433374 3_1:+90871942 Msa0387040:CDS
AATTTATACCTGAAATCATT+GGG 0.433877 3_1:-90874170 None:intergenic
GTGGTGGTGGTGAAGTGTGG+TGG 0.443519 3_1:-90873475 None:intergenic
AGTTCCTGCTGTGCTGTAGA+TGG 0.445982 3_1:-90872122 None:intergenic
CACTCTGCTCTCTCTTCTTG+GGG 0.449462 3_1:+90872155 Msa0387040:CDS
GAGGAGGTGGGTGCTTGTTG+GGG 0.449472 3_1:-90873416 None:intergenic
TACAATGAATTAGGTGGTGT+TGG 0.450827 3_1:+90872026 Msa0387040:CDS
AGTTTGGCAATGTCAACAAC+TGG 0.457707 3_1:-90872092 None:intergenic
GGTGGTGGTGAAGTGTGGTG+GGG 0.458276 3_1:-90873473 None:intergenic
GGAGGTTATTCAATTGTGGT+GGG 0.462836 3_1:-90873509 None:intergenic
GTGGTGGTGAAGTGTGGTGG+GGG 0.468155 3_1:-90873472 None:intergenic
CGGTGGTGATGCAGTGGTGG+TGG 0.469497 3_1:-90873530 None:intergenic
CTGCAAGATAAAGAGGTAGA+AGG 0.474206 3_1:+90874764 Msa0387040:CDS
TGGTGGAGGTTATTCAATTG+TGG 0.475704 3_1:-90873513 None:intergenic
GGAAGAGGATTGCTTCCTAA+AGG 0.484624 3_1:+90874625 Msa0387040:CDS
TTCTCCATCTACAGCACAGC+AGG 0.485461 3_1:+90872118 Msa0387040:CDS
CATAGCAAAATCACTGAACT+TGG 0.489185 3_1:+90874604 Msa0387040:CDS
AGTATATCTTAAGGTACATC+CGG 0.491418 3_1:+90874112 Msa0387040:CDS
CAAAACACGGGCAGCGACGC+CGG 0.491920 3_1:+90873657 Msa0387040:CDS
TGGAGGTTATTCAATTGTGG+TGG 0.494969 3_1:-90873510 None:intergenic
AGGGAGCCAAACGGTATTGA+AGG 0.498045 3_1:+90874035 Msa0387040:CDS
GTTGTGGTTCCGCTTCAAAC+CGG 0.502797 3_1:-90873676 None:intergenic
AGAATCGGTGGGTTCGGCAG+AGG 0.505359 3_1:+90871929 Msa0387040:CDS
GACTGATAGAGTATATCTTA+AGG 0.505600 3_1:+90874103 Msa0387040:CDS
GTAACAGAGGTTGCATCTAA+AGG 0.519166 3_1:+90873387 Msa0387040:intron
TTTACGCCTAGAACATGATC+AGG 0.523560 3_1:-90874707 None:intergenic
AAGTTTAAGGCAGTTATATG+AGG 0.523916 3_1:+90874568 Msa0387040:CDS
TGTAGATGGAGAAATGAGTT+TGG 0.524076 3_1:-90872108 None:intergenic
TGGTGATGCAGTGGTGGTGG+AGG 0.530197 3_1:-90873527 None:intergenic
ATCAGTTCAAGAACTGTCGT+TGG 0.533223 3_1:+90871971 Msa0387040:CDS
CGAAATCCAACGACAAAACA+CGG 0.533945 3_1:+90873644 Msa0387040:CDS
GGCGTAAAGCCACATGCTGA+TGG 0.536648 3_1:+90874722 Msa0387040:CDS
GTTGGTGATCAAATAGAGGT+TGG 0.538613 3_1:+90874854 Msa0387040:CDS
GCAATTCTTTGAACTTCCAA+AGG 0.540464 3_1:+90873992 Msa0387040:CDS
ATCAGGATTGTAATTATGAT+CGG 0.545287 3_1:+90872287 Msa0387040:CDS
GCTTGTCTCTTGACAAAGTG+AGG 0.546684 3_1:+90873958 Msa0387040:CDS
AAAATCACTGAACTTGGAAG+AGG 0.546943 3_1:+90874610 Msa0387040:CDS
TAGAAAGATGGCAGAATCGG+TGG 0.547145 3_1:+90871917 Msa0387040:exon
TTGTTGCTTGTTTCTTGGTG+AGG 0.549849 3_1:-90873597 None:intergenic
GAGGTTATTCAATTGTGGTG+GGG 0.550133 3_1:-90873508 None:intergenic
TAATGTTGGTGATCAAATAG+AGG 0.552527 3_1:+90874850 Msa0387040:CDS
GCAGCGACGCCGGTTTGAAG+CGG 0.575816 3_1:+90873667 Msa0387040:CDS
TTGTAGATATAATTATTTGG+TGG 0.579722 3_1:-90872008 None:intergenic
TGCGTGGTGGTGGTGAAGTG+TGG 0.583756 3_1:-90873478 None:intergenic
GCGGCGTAGTGATGCAGTGA+TGG 0.597391 3_1:-90873566 None:intergenic
ACATGATCAGGCATAGGACA+TGG 0.597433 3_1:-90874695 None:intergenic
TATATCTACAATGAATTAGG+TGG 0.601026 3_1:+90872020 Msa0387040:CDS
AGAAAGATGGCAGAATCGGT+GGG 0.601789 3_1:+90871918 Msa0387040:exon
GCGCGGTGGTGATGCAGTGG+TGG 0.605191 3_1:-90873533 None:intergenic
CTTGTCTCTTGACAAAGTGA+GGG 0.608187 3_1:+90873959 Msa0387040:CDS
GAAATCCAACGACAAAACAC+GGG 0.610068 3_1:+90873645 Msa0387040:CDS
GATGCTCTCGTGATTAATGT+TGG 0.610796 3_1:+90874836 Msa0387040:CDS
AAGTGCTAAAAGATAATCAG+TGG 0.615774 3_1:+90874792 Msa0387040:CDS
AAATATGCAAGGGAGCCAAA+CGG 0.617288 3_1:+90874026 Msa0387040:CDS
CAACACAAACATAAATCTAG+AGG 0.617702 3_1:+90873617 Msa0387040:CDS
TAGTGATGCAGTGATGGTGG+TGG 0.625116 3_1:-90873560 None:intergenic
GAGACAAGCTTGTCATACCA+TGG 0.626742 3_1:-90873944 None:intergenic
GTTGCGCGGTGGTGATGCAG+TGG 0.626761 3_1:-90873536 None:intergenic
GCGTAGTGATGCAGTGATGG+TGG 0.630438 3_1:-90873563 None:intergenic
TAGTTTGTTTGTTGTTTACG+AGG 0.630991 3_1:+90872339 Msa0387040:CDS
GATTGCTTCCTAAAGGAATG+TGG 0.631118 3_1:+90874632 Msa0387040:CDS
AGGTACATCCGGAAGATCAG+AGG 0.633070 3_1:+90874123 Msa0387040:CDS
GTGATTTAGGCAATAAACCA+TGG 0.634072 3_1:+90873927 Msa0387040:intron
CCTAGAACATGATCAGGCAT+AGG 0.638733 3_1:-90874701 None:intergenic
CATTAATCACGAGAGCATCA+GGG 0.648254 3_1:-90874832 None:intergenic
CCCAAGAAGAGAGAGCAGAG+TGG 0.660002 3_1:-90872154 None:intergenic
ATAGATGATCCATCAGCATG+TGG 0.675560 3_1:-90874731 None:intergenic
ATATGAAGATCTGATTGTGA+AGG 0.677136 3_1:-90872068 None:intergenic
GATCAGGCATAGGACATGGA+GGG 0.679288 3_1:-90874691 None:intergenic
TGATCAGGCATAGGACATGG+AGG 0.683082 3_1:-90874692 None:intergenic
GTGATGGTGGTGGTGTTGCG+CGG 0.690858 3_1:-90873550 None:intergenic
TTTACGAGGTATCAGCTCAG+TGG 0.691323 3_1:+90872353 Msa0387040:CDS
ATGGTGGTGGTGTTGCGCGG+TGG 0.708524 3_1:-90873547 None:intergenic
TGAACAATTTACATACAGAG+AGG 0.738395 3_1:-90871878 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTGTAGATATAATTATT+TGG - chr3_1:90872014-90872033 None:intergenic 15.0%
!! AATTATATCTACAATGAATT+AGG + chr3_1:90872017-90872036 Msa0387040:CDS 15.0%
!!! ATTCTAAAACTTTATTTGAT+GGG - chr3_1:90872496-90872515 None:intergenic 15.0%
!!! TATTCTAAAACTTTATTTGA+TGG - chr3_1:90872497-90872516 None:intergenic 15.0%
!! TTTAATAATATTTGCAGATT+CGG - chr3_1:90872663-90872682 None:intergenic 15.0%
!! TTAAATCAATAAATCATAAC+AGG - chr3_1:90873724-90873743 None:intergenic 15.0%
!! TTGATTTAAATTAGAGAATA+CGG + chr3_1:90873735-90873754 Msa0387040:intron 15.0%
!! TTGAATGTAAATATTAGATA+TGG + chr3_1:90873812-90873831 Msa0387040:intron 15.0%
!! AAAGAATATTCATTGTTAAT+GGG - chr3_1:90874213-90874232 None:intergenic 15.0%
!! AAAAGAATATTCATTGTTAA+TGG - chr3_1:90874214-90874233 None:intergenic 15.0%
!! TTGTAGATATAATTATTTGG+TGG - chr3_1:90872011-90872030 None:intergenic 20.0%
!! AAATAGAAAATATTAGCAGT+TGG - chr3_1:90872214-90872233 None:intergenic 20.0%
!!! TTTTTTTTGGAGTTTGTTTT+AGG - chr3_1:90872807-90872826 None:intergenic 20.0%
!!! ACAGTGCTTTTTTTTTTTTT+TGG - chr3_1:90872820-90872839 None:intergenic 20.0%
!! TAAACAACAAACAAATCAAA+AGG + chr3_1:90873262-90873281 Msa0387040:intron 20.0%
!!! ACTCTCAAATAATTTTTTTC+TGG + chr3_1:90873859-90873878 Msa0387040:intron 20.0%
!!! AATTTTTTTCTGGTTCATAT+TGG + chr3_1:90873869-90873888 Msa0387040:intron 20.0%
!! CTAAATCACACAAAATAATT+AGG - chr3_1:90873916-90873935 None:intergenic 20.0%
!!! CTAATTATTTTGTGTGATTT+AGG + chr3_1:90873914-90873933 Msa0387040:intron 20.0%
!! AATTTATACCTGAAATCATT+GGG - chr3_1:90874173-90874192 None:intergenic 20.0%
!! ACAAAAATAGTAGATTTGTA+GGG - chr3_1:90874337-90874356 None:intergenic 20.0%
!! AACAAAAATAGTAGATTTGT+AGG - chr3_1:90874338-90874357 None:intergenic 20.0%
!!! AACGTACAATTTTTTGTTAT+TGG + chr3_1:90874400-90874419 Msa0387040:intron 20.0%
!! TAGAGAAAATAATTGTGTAA+CGG - chr3_1:90874491-90874510 None:intergenic 20.0%
!! AACAATATACTGAAAGTTTA+AGG + chr3_1:90874555-90874574 Msa0387040:CDS 20.0%
! TATATCTACAATGAATTAGG+TGG + chr3_1:90872020-90872039 Msa0387040:CDS 25.0%
! ATACTATCTTCTAAGTTAAG+AGG - chr3_1:90872269-90872288 None:intergenic 25.0%
! TTAACTTAGAAGATAGTATC+AGG + chr3_1:90872270-90872289 Msa0387040:CDS 25.0%
! ATCAGGATTGTAATTATGAT+CGG + chr3_1:90872287-90872306 Msa0387040:CDS 25.0%
!!! TATTAAGTTTTGATGCAATC+AGG + chr3_1:90872468-90872487 Msa0387040:intron 25.0%
! TCTAATACAACTATACTTAG+AGG - chr3_1:90872563-90872582 None:intergenic 25.0%
! GACAGATAAAATATACAAAG+TGG - chr3_1:90872621-90872640 None:intergenic 25.0%
! CGGAAAAAAAAAATCATAAC+AGG - chr3_1:90872643-90872662 None:intergenic 25.0%
! ACTATAATACCAAATTAGCA+GGG + chr3_1:90873088-90873107 Msa0387040:intron 25.0%
!!! AATCTTTGTTTGACTTGATT+TGG - chr3_1:90873146-90873165 None:intergenic 25.0%
! AATCAATAAATCATAACAGG+CGG - chr3_1:90873721-90873740 None:intergenic 25.0%
! ATACGGTATAATCTGTTATT+TGG + chr3_1:90873752-90873771 Msa0387040:intron 25.0%
! AATATTTACATTCAACTTCG+TGG - chr3_1:90873807-90873826 None:intergenic 25.0%
! AAAATAATTAGGAACCTCAT+TGG - chr3_1:90873905-90873924 None:intergenic 25.0%
!!! TATTTTTGCTTTTCTTCCTT+TGG - chr3_1:90874011-90874030 None:intergenic 25.0%
! AAGAAAAGCAAAAATATGCA+AGG + chr3_1:90874015-90874034 Msa0387040:CDS 25.0%
! AGAAAAGCAAAAATATGCAA+GGG + chr3_1:90874016-90874035 Msa0387040:CDS 25.0%
! GAATTTATACCTGAAATCAT+TGG - chr3_1:90874174-90874193 None:intergenic 25.0%
! AATATCTAAGAGTTTGAACT+CGG - chr3_1:90874445-90874464 None:intergenic 25.0%
! ATATATTTCATGTTCAATGC+AGG + chr3_1:90874522-90874541 Msa0387040:intron 25.0%
TGAACAATTTACATACAGAG+AGG - chr3_1:90871881-90871900 None:intergenic 30.0%
!!! CATCATCAGTTTTAGAAAGA+TGG + chr3_1:90871905-90871924 Msa0387040:exon 30.0%
!! TTTTAGAAAGATGGCAGAAT+CGG + chr3_1:90871914-90871933 Msa0387040:exon 30.0%
ATATGAAGATCTGATTGTGA+AGG - chr3_1:90872071-90872090 None:intergenic 30.0%
!! TAGTTTGTTTGTTGTTTACG+AGG + chr3_1:90872339-90872358 Msa0387040:CDS 30.0%
CAAAGTGGACATTAGTTATA+AGG - chr3_1:90872606-90872625 None:intergenic 30.0%
!! TTTTAGGTGGTGATATGTTT+TGG - chr3_1:90872791-90872810 None:intergenic 30.0%
!!! TTTTTGGAGTTTGTTTTAGG+TGG - chr3_1:90872804-90872823 None:intergenic 30.0%
!!! TTTGACTCAAGTTGGTTTTT+GGG - chr3_1:90873025-90873044 None:intergenic 30.0%
AATTTGGTATTATAGTCTGG+TGG - chr3_1:90873084-90873103 None:intergenic 30.0%
GCTAATTTGGTATTATAGTC+TGG - chr3_1:90873087-90873106 None:intergenic 30.0%
GACTATAATACCAAATTAGC+AGG + chr3_1:90873087-90873106 Msa0387040:intron 30.0%
!!! ACTTGATTTGGTTTTTTCTC+TGG - chr3_1:90873134-90873153 None:intergenic 30.0%
AATATGTAAGACGAAAGACA+TGG + chr3_1:90873228-90873247 Msa0387040:intron 30.0%
CAACACAAACATAAATCTAG+AGG + chr3_1:90873617-90873636 Msa0387040:CDS 30.0%
TATTTGAGAGTAGCATTCTT+GGG - chr3_1:90873850-90873869 None:intergenic 30.0%
TTATTTGAGAGTAGCATTCT+TGG - chr3_1:90873851-90873870 None:intergenic 30.0%
!!! TTTTTTCTGGTTCATATTGG+TGG + chr3_1:90873872-90873891 Msa0387040:intron 30.0%
CAGAAAATCAAAAGCTTGAT+TGG + chr3_1:90874081-90874100 Msa0387040:CDS 30.0%
GACTGATAGAGTATATCTTA+AGG + chr3_1:90874103-90874122 Msa0387040:CDS 30.0%
AGTATATCTTAAGGTACATC+CGG + chr3_1:90874112-90874131 Msa0387040:CDS 30.0%
ATCAGAGGAATTTCAAACTT+TGG + chr3_1:90874138-90874157 Msa0387040:CDS 30.0%
TATTTAATAACTCCACCGAA+AGG + chr3_1:90874259-90874278 Msa0387040:intron 30.0%
TAGATTTGTAGGGACTAAAA+AGG - chr3_1:90874327-90874346 None:intergenic 30.0%
CAAAAAATTGTACGTTTGCA+AGG - chr3_1:90874396-90874415 None:intergenic 30.0%
AAATAATTGTGTAACGGTCA+TGG - chr3_1:90874485-90874504 None:intergenic 30.0%
! AAGTTTAAGGCAGTTATATG+AGG + chr3_1:90874568-90874587 Msa0387040:CDS 30.0%
!!! TTTTTTGCTGCAAGATAAAG+AGG + chr3_1:90874757-90874776 Msa0387040:CDS 30.0%
! GATTATCTTTTAGCACTTGA+AGG - chr3_1:90874790-90874809 None:intergenic 30.0%
AAGTGCTAAAAGATAATCAG+TGG + chr3_1:90874792-90874811 Msa0387040:CDS 30.0%
!! TAATGTTGGTGATCAAATAG+AGG + chr3_1:90874850-90874869 Msa0387040:CDS 30.0%
TACAATGAATTAGGTGGTGT+TGG + chr3_1:90872026-90872045 Msa0387040:CDS 35.0%
TGTAGATGGAGAAATGAGTT+TGG - chr3_1:90872111-90872130 None:intergenic 35.0%
TATTCAAGGGGATTTGAACT+CGG - chr3_1:90872400-90872419 None:intergenic 35.0%
AGTTCAAATCCCCTTGAATA+CGG + chr3_1:90872400-90872419 Msa0387040:intron 35.0%
TATAAGGTTAAGACGCATGA+GGG - chr3_1:90872590-90872609 None:intergenic 35.0%
TTATAAGGTTAAGACGCATG+AGG - chr3_1:90872591-90872610 None:intergenic 35.0%
TGGACGAATCAAGATACAAA+TGG + chr3_1:90872708-90872727 Msa0387040:intron 35.0%
!!! TTATCTTCAGGGGTGTTTTT+AGG - chr3_1:90872763-90872782 None:intergenic 35.0%
!! TTTTGGAGGGTTTATCTTCA+GGG - chr3_1:90872774-90872793 None:intergenic 35.0%
!!! ATTTTGAGGGTGTTCTTTGT+GGG - chr3_1:90872880-90872899 None:intergenic 35.0%
!!! TATTTTGAGGGTGTTCTTTG+TGG - chr3_1:90872881-90872900 None:intergenic 35.0%
!!! GTCTGGGAGTTTTATTTTGA+GGG - chr3_1:90872893-90872912 None:intergenic 35.0%
!!! CTTTGACTCAAGTTGGTTTT+TGG - chr3_1:90873026-90873045 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr3_1:90873057-90873076 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr3_1:90873058-90873077 None:intergenic 35.0%
GATCTCGAATCAAAAGTGAT+CGG + chr3_1:90873057-90873076 Msa0387040:intron 35.0%
!!! ACATATTGTGTGCTGGTTTT+CGG - chr3_1:90873215-90873234 None:intergenic 35.0%
TTGGATGGTTTAGGTGTTTA+CGG - chr3_1:90873326-90873345 None:intergenic 35.0%
!! TTGTGCTTTTTGGATGGTTT+AGG - chr3_1:90873335-90873354 None:intergenic 35.0%
!! TCTTGTTTGTGCTTTTTGGA+TGG - chr3_1:90873341-90873360 None:intergenic 35.0%
!! TAGCTCTTGTTTGTGCTTTT+TGG - chr3_1:90873345-90873364 None:intergenic 35.0%
! TTGTGTTGTTGCTTGTTTCT+TGG - chr3_1:90873605-90873624 None:intergenic 35.0%
GTGATTTAGGCAATAAACCA+TGG + chr3_1:90873927-90873946 Msa0387040:intron 35.0%
GCAATTCTTTGAACTTCCAA+AGG + chr3_1:90873992-90874011 Msa0387040:CDS 35.0%
TTGAAATTCCTCTGATCTTC+CGG - chr3_1:90874134-90874153 None:intergenic 35.0%
! CTGAAATCATTGGGTTTTTG+GGG - chr3_1:90874164-90874183 None:intergenic 35.0%
! CCTGAAATCATTGGGTTTTT+GGG - chr3_1:90874165-90874184 None:intergenic 35.0%
! ACCTGAAATCATTGGGTTTT+TGG - chr3_1:90874166-90874185 None:intergenic 35.0%
CATTGTTAATGGGAACTTAG+TGG - chr3_1:90874203-90874222 None:intergenic 35.0%
! CAAGTTCAGTGATTTTGCTA+TGG - chr3_1:90874606-90874625 None:intergenic 35.0%
CATAGCAAAATCACTGAACT+TGG + chr3_1:90874604-90874623 Msa0387040:CDS 35.0%
AAAATCACTGAACTTGGAAG+AGG + chr3_1:90874610-90874629 Msa0387040:CDS 35.0%
!! TCGGCAGAGGTTGATATAAT+CGG + chr3_1:90871942-90871961 Msa0387040:CDS 40.0%
ATCAGTTCAAGAACTGTCGT+TGG + chr3_1:90871971-90871990 Msa0387040:CDS 40.0%
AGTTTGGCAATGTCAACAAC+TGG - chr3_1:90872095-90872114 None:intergenic 40.0%
AAATCCCCTTGAATACGGTT+TGG + chr3_1:90872405-90872424 Msa0387040:intron 40.0%
TATGGTGTACCGTCTATATG+CGG - chr3_1:90872736-90872755 None:intergenic 40.0%
TTTGGAGGGTTTATCTTCAG+GGG - chr3_1:90872773-90872792 None:intergenic 40.0%
!!! GTTTTGGAGGGTTTATCTTC+AGG - chr3_1:90872775-90872794 None:intergenic 40.0%
!! AGGTGGTGATATGTTTTGGA+GGG - chr3_1:90872787-90872806 None:intergenic 40.0%
!! TAGGTGGTGATATGTTTTGG+AGG - chr3_1:90872788-90872807 None:intergenic 40.0%
!!! GGTCTGGGAGTTTTATTTTG+AGG - chr3_1:90872894-90872913 None:intergenic 40.0%
ATAGCTGCATGATCCTTCTT+CGG - chr3_1:90872956-90872975 None:intergenic 40.0%
GTCAGTTCTTTGACTCAAGT+TGG - chr3_1:90873033-90873052 None:intergenic 40.0%
!!! TGGTTTTTTCTCTGGTGTAC+CGG - chr3_1:90873126-90873145 None:intergenic 40.0%
TCGTCTTACATATTGTGTGC+TGG - chr3_1:90873222-90873241 None:intergenic 40.0%
GTTTAGGTGTTTACGGAGTT+TGG - chr3_1:90873319-90873338 None:intergenic 40.0%
TAGATGCAACCTCTGTTACA+CGG - chr3_1:90873386-90873405 None:intergenic 40.0%
GTAACAGAGGTTGCATCTAA+AGG + chr3_1:90873387-90873406 Msa0387040:intron 40.0%
AGGTTATTCAATTGTGGTGG+GGG - chr3_1:90873510-90873529 None:intergenic 40.0%
GAGGTTATTCAATTGTGGTG+GGG - chr3_1:90873511-90873530 None:intergenic 40.0%
GGAGGTTATTCAATTGTGGT+GGG - chr3_1:90873512-90873531 None:intergenic 40.0%
TGGAGGTTATTCAATTGTGG+TGG - chr3_1:90873513-90873532 None:intergenic 40.0%
TGGTGGAGGTTATTCAATTG+TGG - chr3_1:90873516-90873535 None:intergenic 40.0%
! GTTTCTTGGTGAGGATGTTT+TGG - chr3_1:90873591-90873610 None:intergenic 40.0%
! TTGTTGCTTGTTTCTTGGTG+AGG - chr3_1:90873600-90873619 None:intergenic 40.0%
CGAAATCCAACGACAAAACA+CGG + chr3_1:90873644-90873663 Msa0387040:CDS 40.0%
GAAATCCAACGACAAAACAC+GGG + chr3_1:90873645-90873664 Msa0387040:CDS 40.0%
! CCTTTTTATGATCTGGGTTG+TGG - chr3_1:90873695-90873714 None:intergenic 40.0%
CCACAACCCAGATCATAAAA+AGG + chr3_1:90873692-90873711 Msa0387040:CDS 40.0%
CAACCCAGATCATAAAAAGG+CGG + chr3_1:90873695-90873714 Msa0387040:intron 40.0%
GCATTCTTGGGTTTGTGAAA+AGG - chr3_1:90873838-90873857 None:intergenic 40.0%
CTTGTCTCTTGACAAAGTGA+GGG + chr3_1:90873959-90873978 Msa0387040:CDS 40.0%
AAATATGCAAGGGAGCCAAA+CGG + chr3_1:90874026-90874045 Msa0387040:CDS 40.0%
CCATATCCTTCAATACCGTT+TGG - chr3_1:90874044-90874063 None:intergenic 40.0%
! CCAAACGGTATTGAAGGATA+TGG + chr3_1:90874041-90874060 Msa0387040:CDS 40.0%
CCCAAAAACCCAATGATTTC+AGG + chr3_1:90874162-90874181 Msa0387040:CDS 40.0%
TGTTAATGGGAACTTAGTGG+AGG - chr3_1:90874200-90874219 None:intergenic 40.0%
TCGAAGACAGCAAAACCTTT+CGG - chr3_1:90874277-90874296 None:intergenic 40.0%
GATTGCTTCCTAAAGGAATG+TGG + chr3_1:90874632-90874651 Msa0387040:CDS 40.0%
TTTACGCCTAGAACATGATC+AGG - chr3_1:90874710-90874729 None:intergenic 40.0%
ATAGATGATCCATCAGCATG+TGG - chr3_1:90874734-90874753 None:intergenic 40.0%
CTGCAAGATAAAGAGGTAGA+AGG + chr3_1:90874764-90874783 Msa0387040:CDS 40.0%
!! CATTAATCACGAGAGCATCA+GGG - chr3_1:90874835-90874854 None:intergenic 40.0%
!! ACATTAATCACGAGAGCATC+AGG - chr3_1:90874836-90874855 None:intergenic 40.0%
GATGCTCTCGTGATTAATGT+TGG + chr3_1:90874836-90874855 Msa0387040:CDS 40.0%
!! GTTGGTGATCAAATAGAGGT+TGG + chr3_1:90874854-90874873 Msa0387040:CDS 40.0%
TAGAAAGATGGCAGAATCGG+TGG + chr3_1:90871917-90871936 Msa0387040:exon 45.0%
AGAAAGATGGCAGAATCGGT+GGG + chr3_1:90871918-90871937 Msa0387040:exon 45.0%
CTCTTCTTGGGGATTGTTTC+AGG + chr3_1:90872166-90872185 Msa0387040:CDS 45.0%
! TTTACGAGGTATCAGCTCAG+TGG + chr3_1:90872353-90872372 Msa0387040:CDS 45.0%
CAGTCCAAACCGTATTCAAG+GGG - chr3_1:90872412-90872431 None:intergenic 45.0%
GCAGTCCAAACCGTATTCAA+GGG - chr3_1:90872413-90872432 None:intergenic 45.0%
TGCAGTCCAAACCGTATTCA+AGG - chr3_1:90872414-90872433 None:intergenic 45.0%
TTTGGACTGCAAGCAGTTCT+TGG + chr3_1:90872423-90872442 Msa0387040:intron 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr3_1:90872724-90872743 Msa0387040:intron 45.0%
!!! GGGGTGTTTTTAGGTGGTTA+TGG - chr3_1:90872754-90872773 None:intergenic 45.0%
!!! TCTTCAGGGGTGTTTTTAGG+TGG - chr3_1:90872760-90872779 None:intergenic 45.0%
TGTGGGTGAGTAGTGACAAT+GGG - chr3_1:90872863-90872882 None:intergenic 45.0%
TTGTGGGTGAGTAGTGACAA+TGG - chr3_1:90872864-90872883 None:intergenic 45.0%
TTCGAAATGTGGCTCAGCTT+GGG - chr3_1:90872923-90872942 None:intergenic 45.0%
GTTAGGTGCTCTTCGAAATG+TGG - chr3_1:90872934-90872953 None:intergenic 45.0%
TGCATGATCCTTCTTCGGTT+AGG - chr3_1:90872951-90872970 None:intergenic 45.0%
TTTGTGTTGTGCTCTTTCGG+TGG - chr3_1:90873001-90873020 None:intergenic 45.0%
! GGCTTTGTGTTGTGCTCTTT+CGG - chr3_1:90873004-90873023 None:intergenic 45.0%
!!! TTTTTTCTCTGGTGTACCGG+GGG - chr3_1:90873123-90873142 None:intergenic 45.0%
!!! GTTTTTTCTCTGGTGTACCG+GGG - chr3_1:90873124-90873143 None:intergenic 45.0%
!!! GGTTTTTTCTCTGGTGTACC+GGG - chr3_1:90873125-90873144 None:intergenic 45.0%
! GTTCATTTGGCTTCGAGATC+GGG - chr3_1:90873186-90873205 None:intergenic 45.0%
! CGTTCATTTGGCTTCGAGAT+CGG - chr3_1:90873187-90873206 None:intergenic 45.0%
CGATCTCGAAGCCAAATGAA+CGG + chr3_1:90873185-90873204 Msa0387040:intron 45.0%
!!! ATTGTGTGCTGGTTTTCGGT+GGG - chr3_1:90873211-90873230 None:intergenic 45.0%
!!! TATTGTGTGCTGGTTTTCGG+TGG - chr3_1:90873212-90873231 None:intergenic 45.0%
AGGTGTTTACGGAGTTTGGA+GGG - chr3_1:90873315-90873334 None:intergenic 45.0%
TAGGTGTTTACGGAGTTTGG+AGG - chr3_1:90873316-90873335 None:intergenic 45.0%
AGATGCAACCTCTGTTACAC+GGG - chr3_1:90873385-90873404 None:intergenic 45.0%
!! GGTGTTTTAAGTGAGGAGGT+GGG - chr3_1:90873431-90873450 None:intergenic 45.0%
!! TGGTGTTTTAAGTGAGGAGG+TGG - chr3_1:90873432-90873451 None:intergenic 45.0%
!! GGTTGGTGTTTTAAGTGAGG+AGG - chr3_1:90873435-90873454 None:intergenic 45.0%
!! GGTGGTTGGTGTTTTAAGTG+AGG - chr3_1:90873438-90873457 None:intergenic 45.0%
!! TGATGATGTGTGTTGGTGGT+TGG - chr3_1:90873452-90873471 None:intergenic 45.0%
! TTATTCAATTGTGGTGGGGG+TGG - chr3_1:90873507-90873526 None:intergenic 45.0%
!! TCTTGGTGAGGATGTTTTGG+CGG - chr3_1:90873588-90873607 None:intergenic 45.0%
GAGACAAGCTTGTCATACCA+TGG - chr3_1:90873947-90873966 None:intergenic 45.0%
GCTTGTCTCTTGACAAAGTG+AGG + chr3_1:90873958-90873977 Msa0387040:CDS 45.0%
AAGACAGCAAAACCTTTCGG+TGG - chr3_1:90874274-90874293 None:intergenic 45.0%
GGAAGAGGATTGCTTCCTAA+AGG + chr3_1:90874625-90874644 Msa0387040:CDS 45.0%
CTCTCTCTCCACATTCCTTT+AGG - chr3_1:90874643-90874662 None:intergenic 45.0%
ACATGATCAGGCATAGGACA+TGG - chr3_1:90874698-90874717 None:intergenic 45.0%
CCTAGAACATGATCAGGCAT+AGG - chr3_1:90874704-90874723 None:intergenic 45.0%
CCTATGCCTGATCATGTTCT+AGG + chr3_1:90874701-90874720 Msa0387040:CDS 45.0%
!! ACGAGAGCATCAGGGATTAT+TGG - chr3_1:90874827-90874846 None:intergenic 45.0%
TTCTCCATCTACAGCACAGC+AGG + chr3_1:90872118-90872137 Msa0387040:CDS 50.0%
AGTTCCTGCTGTGCTGTAGA+TGG - chr3_1:90872125-90872144 None:intergenic 50.0%
TCCACTCTGCTCTCTCTTCT+TGG + chr3_1:90872153-90872172 Msa0387040:CDS 50.0%
CCACTCTGCTCTCTCTTCTT+GGG + chr3_1:90872154-90872173 Msa0387040:CDS 50.0%
CACTCTGCTCTCTCTTCTTG+GGG + chr3_1:90872155-90872174 Msa0387040:CDS 50.0%
GACTGCAAGCAGTTCTTGGT+GGG + chr3_1:90872427-90872446 Msa0387040:intron 50.0%
CTTCGAAATGTGGCTCAGCT+TGG - chr3_1:90872924-90872943 None:intergenic 50.0%
!! GAAGAGCACCTAACCGAAGA+AGG + chr3_1:90872940-90872959 Msa0387040:intron 50.0%
! TTTTCGGTGGGCCGTTCATT+TGG - chr3_1:90873199-90873218 None:intergenic 50.0%
AGAGCTAGTGACGACGAACA+TGG + chr3_1:90873358-90873377 Msa0387040:intron 50.0%
AACATGGACCCGTGTAACAG+AGG + chr3_1:90873374-90873393 Msa0387040:intron 50.0%
!! TAGTGATGCAGTGATGGTGG+TGG - chr3_1:90873563-90873582 None:intergenic 50.0%
GTTGTGGTTCCGCTTCAAAC+CGG - chr3_1:90873679-90873698 None:intergenic 50.0%
! CGGCCGCCTTTTTATGATCT+GGG - chr3_1:90873701-90873720 None:intergenic 50.0%
! TTGGTGGCTGAGTTCCAATG+AGG + chr3_1:90873888-90873907 Msa0387040:intron 50.0%
! AGGGAGCCAAACGGTATTGA+AGG + chr3_1:90874035-90874054 Msa0387040:CDS 50.0%
AGGTACATCCGGAAGATCAG+AGG + chr3_1:90874123-90874142 Msa0387040:CDS 50.0%
GATCAGGCATAGGACATGGA+GGG - chr3_1:90874694-90874713 None:intergenic 50.0%
TGATCAGGCATAGGACATGG+AGG - chr3_1:90874695-90874714 None:intergenic 50.0%
! GATGGCAGAATCGGTGGGTT+CGG + chr3_1:90871923-90871942 Msa0387040:exon 55.0%
CCCAAGAAGAGAGAGCAGAG+TGG - chr3_1:90872157-90872176 None:intergenic 55.0%
GGACTGCAAGCAGTTCTTGG+TGG + chr3_1:90872426-90872445 Msa0387040:intron 55.0%
TCCATACCTTGCGTCTTGCG+GGG - chr3_1:90872692-90872711 None:intergenic 55.0%
GTCCATACCTTGCGTCTTGC+GGG - chr3_1:90872693-90872712 None:intergenic 55.0%
CGTCCATACCTTGCGTCTTG+CGG - chr3_1:90872694-90872713 None:intergenic 55.0%
TGAGTAGTGACAATGGGCGG+TGG - chr3_1:90872857-90872876 None:intergenic 55.0%
GGGTGAGTAGTGACAATGGG+CGG - chr3_1:90872860-90872879 None:intergenic 55.0%
TGTGGCTCAGCTTGGGTGTT+GGG - chr3_1:90872916-90872935 None:intergenic 55.0%
ATGTGGCTCAGCTTGGGTGT+TGG - chr3_1:90872917-90872936 None:intergenic 55.0%
GTGCTCTTTCGGTGGTTCAG+AGG - chr3_1:90872993-90873012 None:intergenic 55.0%
TTGGCTTCGAGATCGGGAGT+CGG - chr3_1:90873180-90873199 None:intergenic 55.0%
TGAGGAGGTGGGTGCTTGTT+GGG - chr3_1:90873420-90873439 None:intergenic 55.0%
! GGGGTGATGATGTGTGTTGG+TGG - chr3_1:90873456-90873475 None:intergenic 55.0%
! GTGGGGGTGATGATGTGTGT+TGG - chr3_1:90873459-90873478 None:intergenic 55.0%
!! TGGTGGTGGTGAAGTGTGGT+GGG - chr3_1:90873477-90873496 None:intergenic 55.0%
GCGTAGTGATGCAGTGATGG+TGG - chr3_1:90873566-90873585 None:intergenic 55.0%
! GCGGCCGCCTTTTTATGATC+TGG - chr3_1:90873702-90873721 None:intergenic 55.0%
GGCGTAAAGCCACATGCTGA+TGG + chr3_1:90874722-90874741 Msa0387040:CDS 55.0%
! AGAATCGGTGGGTTCGGCAG+AGG + chr3_1:90871929-90871948 Msa0387040:CDS 60.0%
TCCCCGCAAGACGCAAGGTA+TGG + chr3_1:90872688-90872707 Msa0387040:intron 60.0%
!! CAGCTTGGGTGTTGGGGTCT+GGG - chr3_1:90872909-90872928 None:intergenic 60.0%
!! TCAGCTTGGGTGTTGGGGTC+TGG - chr3_1:90872910-90872929 None:intergenic 60.0%
! GTGGCTCAGCTTGGGTGTTG+GGG - chr3_1:90872915-90872934 None:intergenic 60.0%
!! CGAGGGGTGCCCTGCTAATT+TGG - chr3_1:90873100-90873119 None:intergenic 60.0%
TGGCTTCGAGATCGGGAGTC+GGG - chr3_1:90873179-90873198 None:intergenic 60.0%
! GAGGAGGTGGGTGCTTGTTG+GGG - chr3_1:90873419-90873438 None:intergenic 60.0%
GTGAGGAGGTGGGTGCTTGT+TGG - chr3_1:90873421-90873440 None:intergenic 60.0%
! GTGGTGGTGAAGTGTGGTGG+GGG - chr3_1:90873475-90873494 None:intergenic 60.0%
! GGTGGTGGTGAAGTGTGGTG+GGG - chr3_1:90873476-90873495 None:intergenic 60.0%
!! GTGGTGGTGGTGAAGTGTGG+TGG - chr3_1:90873478-90873497 None:intergenic 60.0%
!! TGCGTGGTGGTGGTGAAGTG+TGG - chr3_1:90873481-90873500 None:intergenic 60.0%
!! TGGTGATGCAGTGGTGGTGG+AGG - chr3_1:90873530-90873549 None:intergenic 60.0%
!! GTGATGGTGGTGGTGTTGCG+CGG - chr3_1:90873553-90873572 None:intergenic 60.0%
GCGGCGTAGTGATGCAGTGA+TGG - chr3_1:90873569-90873588 None:intergenic 60.0%
! CGCTGCCCGTGTTTTGTCGT+TGG - chr3_1:90873653-90873672 None:intergenic 60.0%
CGTCTTCCCCGCAAGACGCA+AGG + chr3_1:90872683-90872702 Msa0387040:intron 65.0%
TCGGTGGTTCAGAGGTCGCG+AGG - chr3_1:90872985-90873004 None:intergenic 65.0%
GGCTTCGAGATCGGGAGTCG+GGG - chr3_1:90873178-90873197 None:intergenic 65.0%
! CGGTGGTGATGCAGTGGTGG+TGG - chr3_1:90873533-90873552 None:intergenic 65.0%
! GTTGCGCGGTGGTGATGCAG+TGG - chr3_1:90873539-90873558 None:intergenic 65.0%
!! ATGGTGGTGGTGTTGCGCGG+TGG - chr3_1:90873550-90873569 None:intergenic 65.0%
CAAAACACGGGCAGCGACGC+CGG + chr3_1:90873657-90873676 Msa0387040:CDS 65.0%
!! GCAGCGACGCCGGTTTGAAG+CGG + chr3_1:90873667-90873686 Msa0387040:CDS 65.0%
TCTGGTGTACCGGGGGCGAG+GGG - chr3_1:90873116-90873135 None:intergenic 70.0%
CTCTGGTGTACCGGGGGCGA+GGG - chr3_1:90873117-90873136 None:intergenic 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - chr3_1:90873118-90873137 None:intergenic 70.0%
! GGGGTGGTGATGCGTGGTGG+TGG - chr3_1:90873491-90873510 None:intergenic 70.0%
! GTGGGGGTGGTGATGCGTGG+TGG - chr3_1:90873494-90873513 None:intergenic 70.0%
! GTGGTGGGGGTGGTGATGCG+TGG - chr3_1:90873497-90873516 None:intergenic 70.0%
! GCGCGGTGGTGATGCAGTGG+TGG - chr3_1:90873536-90873555 None:intergenic 70.0%
!! AGCAGGGCACCCCTCGCCCC+CGG + chr3_1:90873104-90873123 Msa0387040:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 90871866 90874883 90871866 ID=Msa0387040;Name=Msa0387040
chr3_1 mRNA 90871866 90874883 90871866 ID=Msa0387040-mRNA-1;Parent=Msa0387040;Name=Msa0387040-mRNA-1;_AED=0.14;_eAED=0.14;_QI=58|0.25|0.4|0.8|1|1|5|0|429
chr3_1 exon 90871866 90872187 90871866 ID=Msa0387040-mRNA-1:exon:25179;Parent=Msa0387040-mRNA-1
chr3_1 exon 90872257 90872374 90872257 ID=Msa0387040-mRNA-1:exon:25180;Parent=Msa0387040-mRNA-1
chr3_1 exon 90873394 90873713 90873394 ID=Msa0387040-mRNA-1:exon:25181;Parent=Msa0387040-mRNA-1
chr3_1 exon 90873936 90874183 90873936 ID=Msa0387040-mRNA-1:exon:25182;Parent=Msa0387040-mRNA-1
chr3_1 exon 90874544 90874883 90874544 ID=Msa0387040-mRNA-1:exon:25183;Parent=Msa0387040-mRNA-1
chr3_1 five_prime_UTR 90871866 90871923 90871866 ID=Msa0387040-mRNA-1:five_prime_utr;Parent=Msa0387040-mRNA-1
chr3_1 CDS 90871924 90872187 90871924 ID=Msa0387040-mRNA-1:cds;Parent=Msa0387040-mRNA-1
chr3_1 CDS 90872257 90872374 90872257 ID=Msa0387040-mRNA-1:cds;Parent=Msa0387040-mRNA-1
chr3_1 CDS 90873394 90873713 90873394 ID=Msa0387040-mRNA-1:cds;Parent=Msa0387040-mRNA-1
chr3_1 CDS 90873936 90874183 90873936 ID=Msa0387040-mRNA-1:cds;Parent=Msa0387040-mRNA-1
chr3_1 CDS 90874544 90874883 90874544 ID=Msa0387040-mRNA-1:cds;Parent=Msa0387040-mRNA-1
Gene Sequence

>Msa0387040

ATGGCAGAATCGGTGGGTTCGGCAGAGGTTGATATAATCGGTTGTAAATCAGTTCAAGAACTGTCGTTGGATTCTGAAAATCTACCACCAAATAATTATATCTACAATGAATTAGGTGGTGTTGGATTTCGTGATGCTCTTCTTCCTTCACAATCAGATCTTCATATTCCAGTTGTTGACATTGCCAAACTCATTTCTCCATCTACAGCACAGCAGGAACTTCATAAACTCCACTCTGCTCTCTCTTCTTGGGGATTGTTTCAGTTAAGTATTCCTCTTAACTTAGAAGATAGTATCAGGATTGTAATTATGATCGGATCTAACTTCGTGAGAAGAGACACTAAGATAGTTTGTTTGTTGTTTACGAGGTATCAGCTCAGTGAGGTTGCATCTAAAGGAAATCACCCCAACAAGCACCCACCTCCTCACTTAAAACACCAACCACCAACACACATCATCACCCCCACCACACTTCACCACCACCACGCATCACCACCCCCACCACAATTGAATAACCTCCACCACCACTGCATCACCACCGCGCAACACCACCACCATCACTGCATCACTACGCCGCCAAAACATCCTCACCAAGAAACAAGCAACAACACAAACATAAATCTAGAGGAAGACGAAATCCAACGACAAAACACGGGCAGCGACGCCGGTTTGAAGCGGAACCACAACCCAGATCATAAAAAGGCAATAAACCATGGTATGACAAGCTTGTCTCTTGACAAAGTGAGGGAAATTTCAAAGCAATTCTTTGAACTTCCAAAGGAAGAAAAGCAAAAATATGCAAGGGAGCCAAACGGTATTGAAGGATATGGAAATGATGTAATATTATCAGAAAATCAAAAGCTTGATTGGACTGATAGAGTATATCTTAAGGTACATCCGGAAGATCAGAGGAATTTCAAACTTTGGCCCCAAAAACCCAATGATTTCAGGAATACTATAGAACAATATACTGAAAGTTTAAGGCAGTTATATGAGGTAATTTTAAGAGCCATAGCAAAATCACTGAACTTGGAAGAGGATTGCTTCCTAAAGGAATGTGGAGAGAGAGCTACAATGTTTATGAGAATCAATTACTACCCTCCATGTCCTATGCCTGATCATGTTCTAGGCGTAAAGCCACATGCTGATGGATCATCTATAACTTTTTTGCTGCAAGATAAAGAGGTAGAAGGCCTTCAAGTGCTAAAAGATAATCAGTGGTTTAAAGTTCCAATAATCCCTGATGCTCTCGTGATTAATGTTGGTGATCAAATAGAGGTTGGTAATTAA
Protein sequence

>Msa0387040

MAESVGSAEVDIIGCKSVQELSLDSENLPPNNYIYNELGGVGFRDALLPSQSDLHIPVVDIAKLISPSTAQQELHKLHSALSSWGLFQLSIPLNLEDSIRIVIMIGSNFVRRDTKIVCLLFTRYQLSEVASKGNHPNKHPPPHLKHQPPTHIITPTTLHHHHASPPPPQLNNLHHHCITTAQHHHHHCITTPPKHPHQETSNNTNINLEEDEIQRQNTGSDAGLKRNHNPDHKKAINHGMTSLSLDKVREISKQFFELPKEEKQKYAREPNGIEGYGNDVILSENQKLDWTDRVYLKVHPEDQRNFKLWPQKPNDFRNTIEQYTESLRQLYEVILRAIAKSLNLEEDCFLKECGERATMFMRINYYPPCPMPDHVLGVKPHADGSSITFLLQDKEVEGLQVLKDNQWFKVPIIPDALVINVGDQIEVGN*