Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305110 | CDY45508.1 | 88.309 | 556 | 57 | 4 | 1 | 551 | 31 | 583 | 0.0 | 1009 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305110 | sp|Q6EW56|RPOB_NYMAL | 74.038 | 624 | 87 | 6 | 1 | 551 | 301 | 922 | 0.0 | 914 |
| Msa1305110 | sp|Q6EW56|RPOB_NYMAL | 84.783 | 46 | 7 | 0 | 579 | 624 | 1026 | 1071 | 6.65e-15 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305110 | A0A023HQ20 | 82.931 | 621 | 34 | 5 | 1 | 551 | 300 | 918 | 0.0 | 1013 |
| Msa1305110 | A0A023HQ20 | 92.000 | 50 | 4 | 0 | 575 | 624 | 1018 | 1067 | 3.38e-16 | 94.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0139810 | Msa1305110 | 0.800368 | 1.489035e-48 | -8.615850e-47 |
| Msa0139830 | Msa1305110 | 0.820692 | 5.996296e-53 | -8.615850e-47 |
| Msa1305100 | Msa1305110 | 0.807014 | 6.214715e-50 | -8.615850e-47 |
| Msa1305110 | Msa1305150 | 0.839016 | 2.038131e-57 | -8.615850e-47 |
| Msa1305110 | Msa1355110 | 0.844275 | 8.363976e-59 | -8.615850e-47 |
| Msa1086130 | Msa1305110 | 0.806359 | 8.547541e-50 | -8.615850e-47 |
| Msa1086220 | Msa1305110 | 0.807809 | 4.215491e-50 | -8.615850e-47 |
| Msa0931060 | Msa1305110 | 0.804514 | 2.082827e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305110 | MtrunA17_Chr4g0016641 | 96.375 | 469 | 12 | 2 | 1 | 466 | 305 | 771 | 0.0 | 920 |
| Msa1305110 | MtrunA17_Chr4g0016641 | 100.000 | 86 | 0 | 0 | 466 | 551 | 841 | 926 | 2.68e-50 | 188 |
| Msa1305110 | MtrunA17_Chr4g0016641 | 100.000 | 46 | 0 | 0 | 579 | 624 | 1030 | 1075 | 3.41e-20 | 95.5 |
| Msa1305110 | MtrunA17_CPg0493041 | 96.375 | 469 | 12 | 2 | 1 | 466 | 305 | 771 | 0.0 | 920 |
| Msa1305110 | MtrunA17_CPg0493041 | 100.000 | 86 | 0 | 0 | 466 | 551 | 841 | 926 | 2.68e-50 | 188 |
| Msa1305110 | MtrunA17_CPg0493041 | 100.000 | 46 | 0 | 0 | 579 | 624 | 1030 | 1075 | 3.41e-20 | 95.5 |
| Msa1305110 | MtrunA17_Chr4g0015531 | 75.683 | 366 | 10 | 5 | 1 | 363 | 5 | 294 | 0.0 | 523 |
| Msa1305110 | MtrunA17_Chr1g0159041 | 61.323 | 393 | 47 | 4 | 167 | 525 | 1 | 322 | 1.75e-154 | 447 |
| Msa1305110 | MtrunA17_Chr4g0015541 | 59.677 | 186 | 23 | 3 | 491 | 624 | 1 | 186 | 3.20e-58 | 198 |
| Msa1305110 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 320 | 397 | 1 | 78 | 8.99e-49 | 164 |
| Msa1305110 | MtrunA17_Chr1g0159051 | 95.946 | 74 | 3 | 0 | 1 | 74 | 43 | 116 | 1.45e-40 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305110 | ATCG00190.1 | 86.837 | 471 | 55 | 3 | 1 | 466 | 300 | 768 | 0.0 | 839 |
| Msa1305110 | ATCG00190.1 | 94.186 | 86 | 5 | 0 | 466 | 551 | 838 | 923 | 5.69e-48 | 181 |
| Msa1305110 | ATCG00190.1 | 93.478 | 46 | 3 | 0 | 579 | 624 | 1027 | 1072 | 7.12e-18 | 88.6 |
Find 142 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | 8_3:+68477878 | Msa1305110:CDS |
| TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | 8_3:-68478850 | None:intergenic |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | 8_3:-68479427 | None:intergenic |
| GAACGTTGATATCTAATTAA+TGG | 0.244746 | 8_3:-68478527 | None:intergenic |
| TAGATTATTACGAGCTATAC+TGG | 0.247661 | 8_3:+68478976 | Msa1305110:CDS |
| GGAATCAATGTAGGACTTAT+TGG | 0.263649 | 8_3:+68477996 | Msa1305110:CDS |
| AGCACTGAATCGAGGTATTC+AGG | 0.270037 | 8_3:+68478166 | Msa1305110:CDS |
| GATCTATTACAAGATCAATT+TGG | 0.270369 | 8_3:+68477666 | Msa1305110:CDS |
| GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | 8_3:-68477789 | None:intergenic |
| CGATCTAAAACTTGAGATAA+TGG | 0.281648 | 8_3:-68477828 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 8_3:-68479225 | None:intergenic |
| TACGAGCTATACTGGGATTC+AGG | 0.302178 | 8_3:+68478984 | Msa1305110:CDS |
| ATAATTCGAGGAACTATATC+TGG | 0.305120 | 8_3:+68477714 | Msa1305110:CDS |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 8_3:-68479267 | None:intergenic |
| GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | 8_3:+68477879 | Msa1305110:CDS |
| CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | 8_3:+68478413 | Msa1305110:CDS |
| TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | 8_3:+68478640 | Msa1305110:CDS |
| CGCATTTACCTTTATGAACC+TGG | 0.329782 | 8_3:-68478580 | None:intergenic |
| AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | 8_3:-68478450 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | 8_3:+68479482 | Msa1305110:CDS |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | 8_3:+68479287 | Msa1305110:CDS |
| AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | 8_3:-68479893 | None:intergenic |
| TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | 8_3:-68479792 | None:intergenic |
| TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | 8_3:+68478031 | Msa1305110:CDS |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | 8_3:-68479810 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 8_3:+68479253 | Msa1305110:CDS |
| GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | 8_3:+68478357 | Msa1305110:CDS |
| CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | 8_3:+68478890 | Msa1305110:CDS |
| CCATGAACTATTTGGGTCAA+TGG | 0.354074 | 8_3:-68477858 | None:intergenic |
| TTCCGCTCTTTCCCGATACT+CGG | 0.356307 | 8_3:-68479463 | None:intergenic |
| CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | 8_3:+68478377 | Msa1305110:CDS |
| AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | 8_3:-68478423 | None:intergenic |
| CGTTCGAGAACTACGATCTT+TGG | 0.364953 | 8_3:+68479830 | Msa1305110:CDS |
| GAAGCTCCAATAGAAAATAT+TGG | 0.378418 | 8_3:-68478273 | None:intergenic |
| TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | 8_3:+68477897 | Msa1305110:CDS |
| AGTACTCGGAACTACGATAT+TGG | 0.382949 | 8_3:+68479759 | Msa1305110:CDS |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 8_3:+68479309 | Msa1305110:CDS |
| TTATGCTCGATAAAAGAATC+AGG | 0.394427 | 8_3:-68478296 | None:intergenic |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | 8_3:+68479252 | Msa1305110:CDS |
| GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | 8_3:+68478641 | Msa1305110:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 8_3:+68479236 | Msa1305110:CDS |
| ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | 8_3:-68477978 | None:intergenic |
| TGTAGGACTTATTGGATCCT+TGG | 0.411030 | 8_3:+68478004 | Msa1305110:CDS |
| TCTAACTATTGCATGGGAAC+AGG | 0.414074 | 8_3:+68478226 | Msa1305110:CDS |
| GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | 8_3:+68478383 | Msa1305110:CDS |
| TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | 8_3:+68478030 | Msa1305110:CDS |
| TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | 8_3:+68477896 | Msa1305110:CDS |
| GAATTGTGATTCTGGGATCT+TGG | 0.426630 | 8_3:+68478879 | Msa1305110:CDS |
| GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | 8_3:-68478849 | None:intergenic |
| AACTATTTGGGTCAATGGAT+TGG | 0.429624 | 8_3:-68477853 | None:intergenic |
| CCATTGACCCAAATAGTTCA+TGG | 0.431227 | 8_3:+68477858 | Msa1305110:CDS |
| AAGTAGAGATGAATACTATA+TGG | 0.431841 | 8_3:+68478124 | Msa1305110:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 8_3:-68479266 | None:intergenic |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | 8_3:-68479509 | None:intergenic |
| GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | 8_3:-68478938 | None:intergenic |
| GATATCCATCCTAGTCACTA+TGG | 0.449002 | 8_3:+68477945 | Msa1305110:CDS |
| AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | 8_3:+68477885 | Msa1305110:CDS |
| GCTCGTAATAATCTATCTTC+CGG | 0.462719 | 8_3:-68478968 | None:intergenic |
| GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | 8_3:+68478925 | Msa1305110:CDS |
| GATATTTGAACCCGAGTATC+GGG | 0.468017 | 8_3:+68479452 | Msa1305110:CDS |
| GATCTAAAACTTGAGATAAT+GGG | 0.468332 | 8_3:-68477827 | None:intergenic |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | 8_3:+68479473 | Msa1305110:CDS |
| ATTACAAGATCAATTTGGAT+TGG | 0.471878 | 8_3:+68477671 | Msa1305110:CDS |
| AAGAATTTCTAACTATTGCA+TGG | 0.481440 | 8_3:+68478219 | Msa1305110:CDS |
| CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | 8_3:-68478440 | None:intergenic |
| CGTTTAGAAAATATAATTCG+AGG | 0.485783 | 8_3:+68477702 | Msa1305110:CDS |
| AATTGTGATTCTGGGATCTT+GGG | 0.486220 | 8_3:+68478880 | Msa1305110:CDS |
| TGTTCATATCTCTCATCAAA+AGG | 0.491842 | 8_3:-68479363 | None:intergenic |
| TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | 8_3:+68478023 | Msa1305110:CDS |
| GGATATTTGAACCCGAGTAT+CGG | 0.503387 | 8_3:+68479451 | Msa1305110:CDS |
| GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | 8_3:+68478388 | Msa1305110:CDS |
| CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | 8_3:-68478415 | None:intergenic |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 8_3:+68478718 | Msa1305110:CDS |
| AGAACTACGATCTTTGGCTC+TGG | 0.513829 | 8_3:+68479836 | Msa1305110:CDS |
| GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | 8_3:-68477903 | None:intergenic |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 8_3:+68479219 | Msa1305110:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 8_3:+68478672 | Msa1305110:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | 8_3:+68479430 | Msa1305110:CDS |
| ATATAGTATTCATCTCTACT+TGG | 0.523407 | 8_3:-68478122 | None:intergenic |
| GCATTTACCTTTATGAACCT+GGG | 0.530323 | 8_3:-68478579 | None:intergenic |
| TCCGCTCTTTCCCGATACTC+GGG | 0.530487 | 8_3:-68479462 | None:intergenic |
| AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | 8_3:-68479798 | None:intergenic |
| GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | 8_3:+68478623 | Msa1305110:CDS |
| AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | 8_3:+68479883 | Msa1305110:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 8_3:-68479246 | None:intergenic |
| AATTCTTGACGGTATCGAGC+TGG | 0.536702 | 8_3:-68478203 | None:intergenic |
| CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | 8_3:-68478214 | None:intergenic |
| TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | 8_3:-68478960 | None:intergenic |
| TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | 8_3:-68478957 | None:intergenic |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | 8_3:-68479447 | None:intergenic |
| TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | 8_3:-68478441 | None:intergenic |
| AGAATTTCTAACTATTGCAT+GGG | 0.549733 | 8_3:+68478220 | Msa1305110:CDS |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | 8_3:+68479300 | Msa1305110:CDS |
| TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | 8_3:-68478805 | None:intergenic |
| GAATACTATATGGTAGCGAC+GGG | 0.553560 | 8_3:+68478134 | Msa1305110:CDS |
| GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | 8_3:+68478626 | Msa1305110:CDS |
| CTCCAATAGAAAATATTGGA+AGG | 0.555677 | 8_3:-68478269 | None:intergenic |
| CATTGACCCAAATAGTTCAT+GGG | 0.556065 | 8_3:+68477859 | Msa1305110:CDS |
| ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | 8_3:-68477658 | None:intergenic |
| AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | 8_3:+68479887 | Msa1305110:CDS |
| GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | 8_3:-68477759 | None:intergenic |
| GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | 8_3:-68479872 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 8_3:+68479310 | Msa1305110:CDS |
| GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | 8_3:+68478949 | Msa1305110:CDS |
| TGAATACTATATGGTAGCGA+CGG | 0.571395 | 8_3:+68478133 | Msa1305110:CDS |
| TCCTACATTGATTCCTTCCG+AGG | 0.572209 | 8_3:-68477988 | None:intergenic |
| CAAATGCGTCCATAGTGACT+AGG | 0.573493 | 8_3:-68477954 | None:intergenic |
| AGATTATTACGAGCTATACT+GGG | 0.573963 | 8_3:+68478977 | Msa1305110:CDS |
| TCCAATAGAAAATATTGGAA+GGG | 0.576425 | 8_3:-68478268 | None:intergenic |
| CAGACTCATGTGACAAGCCA+TGG | 0.581560 | 8_3:+68478788 | Msa1305110:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 8_3:-68479280 | None:intergenic |
| AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | 8_3:-68478836 | None:intergenic |
| TGTCCAATTGACACCTCGGA+AGG | 0.584582 | 8_3:+68477975 | Msa1305110:CDS |
| ACTCGGAACTACGATATTGG+AGG | 0.590491 | 8_3:+68479762 | Msa1305110:CDS |
| TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | 8_3:+68478891 | Msa1305110:CDS |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 8_3:-68478689 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 8_3:+68478673 | Msa1305110:CDS |
| CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | 8_3:+68478032 | Msa1305110:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 8_3:+68478677 | Msa1305110:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 8_3:-68479279 | None:intergenic |
| GATCCTTGGCAATTCACGCA+AGG | 0.614349 | 8_3:+68478018 | Msa1305110:CDS |
| AACTGGATTGGAACGCCAAG+TGG | 0.615266 | 8_3:+68478400 | Msa1305110:CDS |
| TATGCTCGATAAAAGAATCA+GGG | 0.615914 | 8_3:-68478295 | None:intergenic |
| GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | 8_3:-68477765 | None:intergenic |
| TGATGAGAGATATGAACAGG+AGG | 0.620223 | 8_3:+68479368 | Msa1305110:CDS |
| AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | 8_3:-68478021 | None:intergenic |
| CATTTGTCCAATTGACACCT+CGG | 0.622149 | 8_3:+68477971 | Msa1305110:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | 8_3:+68479276 | Msa1305110:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 8_3:-68479247 | None:intergenic |
| TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | 8_3:-68477950 | None:intergenic |
| ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | 8_3:+68478033 | Msa1305110:CDS |
| TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | 8_3:+68477888 | Msa1305110:CDS |
| TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | 8_3:+68477898 | Msa1305110:CDS |
| GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | 8_3:+68478892 | Msa1305110:CDS |
| ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | 8_3:+68477987 | Msa1305110:CDS |
| AGGAACAATACCTAAACCTG+TGG | 0.656849 | 8_3:+68479782 | Msa1305110:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | 8_3:+68479745 | Msa1305110:intron |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 8_3:+68479254 | Msa1305110:CDS |
| ACCCGAGTATCGGGAAAGAG+CGG | 0.671619 | 8_3:+68479461 | Msa1305110:CDS |
| CCCGCTATAGCCGAACACGC+AGG | 0.684746 | 8_3:+68478440 | Msa1305110:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | 8_3:+68479483 | Msa1305110:CDS |
| ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | 8_3:+68478169 | Msa1305110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATTTCAAGATATA+AGG | - | chr8_3:68479542-68479561 | None:intergenic | 15.0% |
| !! | TGAATTAATTTCAAGATATA+AGG | - | chr8_3:68479542-68479561 | None:intergenic | 15.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | + | chr8_3:68478488-68478507 | Msa1305110:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | + | chr8_3:68478489-68478508 | Msa1305110:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | - | chr8_3:68478815-68478834 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | - | chr8_3:68478862-68478881 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | - | chr8_3:68479111-68479130 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | + | chr8_3:68478488-68478507 | Msa1305110:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | + | chr8_3:68478489-68478508 | Msa1305110:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | - | chr8_3:68478815-68478834 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | - | chr8_3:68478862-68478881 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | - | chr8_3:68479111-68479130 | None:intergenic | 20.0% |
| ! | GATCTATTACAAGATCAATT+TGG | + | chr8_3:68477666-68477685 | Msa1305110:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | + | chr8_3:68477671-68477690 | Msa1305110:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | + | chr8_3:68477702-68477721 | Msa1305110:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | - | chr8_3:68477830-68477849 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | - | chr8_3:68478071-68478090 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | - | chr8_3:68478125-68478144 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | + | chr8_3:68478124-68478143 | Msa1305110:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | - | chr8_3:68478217-68478236 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | + | chr8_3:68478219-68478238 | Msa1305110:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | + | chr8_3:68478220-68478239 | Msa1305110:CDS | 25.0% |
| ! | TCCAATAGAAAATATTGGAA+GGG | - | chr8_3:68478271-68478290 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | + | chr8_3:68478482-68478501 | Msa1305110:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | - | chr8_3:68478530-68478549 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | + | chr8_3:68478589-68478608 | Msa1305110:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | + | chr8_3:68478590-68478609 | Msa1305110:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | + | chr8_3:68478872-68478891 | Msa1305110:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | + | chr8_3:68479146-68479165 | Msa1305110:intron | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | - | chr8_3:68479524-68479543 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | + | chr8_3:68479563-68479582 | Msa1305110:intron | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | + | chr8_3:68477666-68477685 | Msa1305110:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | + | chr8_3:68477671-68477690 | Msa1305110:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | + | chr8_3:68477702-68477721 | Msa1305110:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | - | chr8_3:68477830-68477849 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | - | chr8_3:68478071-68478090 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | - | chr8_3:68478125-68478144 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | + | chr8_3:68478124-68478143 | Msa1305110:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | - | chr8_3:68478217-68478236 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | + | chr8_3:68478219-68478238 | Msa1305110:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | + | chr8_3:68478220-68478239 | Msa1305110:CDS | 25.0% |
| ! | TCCAATAGAAAATATTGGAA+GGG | - | chr8_3:68478271-68478290 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | + | chr8_3:68478482-68478501 | Msa1305110:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | - | chr8_3:68478530-68478549 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | + | chr8_3:68478589-68478608 | Msa1305110:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | + | chr8_3:68478590-68478609 | Msa1305110:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | + | chr8_3:68478872-68478891 | Msa1305110:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | + | chr8_3:68479146-68479165 | Msa1305110:intron | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | - | chr8_3:68479524-68479543 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | + | chr8_3:68479563-68479582 | Msa1305110:intron | 25.0% |
| ATCTTGTAATAGATCTGCTA+CGG | - | chr8_3:68477661-68477680 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | + | chr8_3:68477714-68477733 | Msa1305110:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | - | chr8_3:68477792-68477811 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | + | chr8_3:68477798-68477817 | Msa1305110:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | - | chr8_3:68477802-68477821 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | - | chr8_3:68477831-68477850 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | - | chr8_3:68477868-68477887 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | - | chr8_3:68477869-68477888 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | + | chr8_3:68477878-68477897 | Msa1305110:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | + | chr8_3:68477879-68477898 | Msa1305110:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | + | chr8_3:68478158-68478177 | Msa1305110:CDS | 30.0% |
| ! | TCCCTTCCAATATTTTCTAT+TGG | + | chr8_3:68478267-68478286 | Msa1305110:CDS | 30.0% |
| CTCCAATAGAAAATATTGGA+AGG | - | chr8_3:68478272-68478291 | None:intergenic | 30.0% | |
| GAAGCTCCAATAGAAAATAT+TGG | - | chr8_3:68478276-68478295 | None:intergenic | 30.0% | |
| TATGCTCGATAAAAGAATCA+GGG | - | chr8_3:68478298-68478317 | None:intergenic | 30.0% | |
| TTATGCTCGATAAAAGAATC+AGG | - | chr8_3:68478299-68478318 | None:intergenic | 30.0% | |
| !! | ATGCATGCAAGTATTTTTGT+TGG | - | chr8_3:68478552-68478571 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | + | chr8_3:68478672-68478691 | Msa1305110:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | + | chr8_3:68478673-68478692 | Msa1305110:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | - | chr8_3:68478852-68478871 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | - | chr8_3:68478853-68478872 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | + | chr8_3:68478857-68478876 | Msa1305110:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | + | chr8_3:68478871-68478890 | Msa1305110:CDS | 30.0% | |
| TAGATTATTACGAGCTATAC+TGG | + | chr8_3:68478976-68478995 | Msa1305110:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+GGG | + | chr8_3:68478977-68478996 | Msa1305110:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | - | chr8_3:68479016-68479035 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | + | chr8_3:68479024-68479043 | Msa1305110:intron | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | + | chr8_3:68479135-68479154 | Msa1305110:intron | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | + | chr8_3:68479197-68479216 | Msa1305110:intron | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | + | chr8_3:68479287-68479306 | Msa1305110:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | - | chr8_3:68479366-68479385 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | + | chr8_3:68479365-68479384 | Msa1305110:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | - | chr8_3:68479397-68479416 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | + | chr8_3:68479483-68479502 | Msa1305110:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | - | chr8_3:68479512-68479531 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | + | chr8_3:68479512-68479531 | Msa1305110:intron | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | - | chr8_3:68477661-68477680 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | + | chr8_3:68477714-68477733 | Msa1305110:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | - | chr8_3:68477792-68477811 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | + | chr8_3:68477798-68477817 | Msa1305110:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | - | chr8_3:68477802-68477821 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | - | chr8_3:68477831-68477850 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | - | chr8_3:68477868-68477887 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | - | chr8_3:68477869-68477888 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | + | chr8_3:68477878-68477897 | Msa1305110:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | + | chr8_3:68477879-68477898 | Msa1305110:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | + | chr8_3:68478158-68478177 | Msa1305110:CDS | 30.0% |
| ! | TCCCTTCCAATATTTTCTAT+TGG | + | chr8_3:68478267-68478286 | Msa1305110:CDS | 30.0% |
| CTCCAATAGAAAATATTGGA+AGG | - | chr8_3:68478272-68478291 | None:intergenic | 30.0% | |
| GAAGCTCCAATAGAAAATAT+TGG | - | chr8_3:68478276-68478295 | None:intergenic | 30.0% | |
| TATGCTCGATAAAAGAATCA+GGG | - | chr8_3:68478298-68478317 | None:intergenic | 30.0% | |
| TTATGCTCGATAAAAGAATC+AGG | - | chr8_3:68478299-68478318 | None:intergenic | 30.0% | |
| !! | ATGCATGCAAGTATTTTTGT+TGG | - | chr8_3:68478552-68478571 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | + | chr8_3:68478672-68478691 | Msa1305110:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | + | chr8_3:68478673-68478692 | Msa1305110:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | - | chr8_3:68478852-68478871 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | - | chr8_3:68478853-68478872 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | + | chr8_3:68478857-68478876 | Msa1305110:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | + | chr8_3:68478871-68478890 | Msa1305110:CDS | 30.0% | |
| TAGATTATTACGAGCTATAC+TGG | + | chr8_3:68478976-68478995 | Msa1305110:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+GGG | + | chr8_3:68478977-68478996 | Msa1305110:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | - | chr8_3:68479016-68479035 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | + | chr8_3:68479024-68479043 | Msa1305110:intron | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | + | chr8_3:68479135-68479154 | Msa1305110:intron | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | + | chr8_3:68479197-68479216 | Msa1305110:intron | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | + | chr8_3:68479287-68479306 | Msa1305110:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | - | chr8_3:68479366-68479385 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | + | chr8_3:68479365-68479384 | Msa1305110:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | - | chr8_3:68479397-68479416 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | + | chr8_3:68479483-68479502 | Msa1305110:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | - | chr8_3:68479512-68479531 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | + | chr8_3:68479512-68479531 | Msa1305110:intron | 30.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | - | chr8_3:68477768-68477787 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | - | chr8_3:68477856-68477875 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | + | chr8_3:68477859-68477878 | Msa1305110:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | + | chr8_3:68477885-68477904 | Msa1305110:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | + | chr8_3:68477996-68478015 | Msa1305110:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | + | chr8_3:68478133-68478152 | Msa1305110:CDS | 35.0% |
| ! | AGTTCCAACAATGCACTTTT+CGG | - | chr8_3:68478384-68478403 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | + | chr8_3:68478572-68478591 | Msa1305110:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | - | chr8_3:68478582-68478601 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | + | chr8_3:68478608-68478627 | Msa1305110:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | + | chr8_3:68478880-68478899 | Msa1305110:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | + | chr8_3:68478904-68478923 | Msa1305110:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | + | chr8_3:68478905-68478924 | Msa1305110:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | - | chr8_3:68478971-68478990 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | + | chr8_3:68479027-68479046 | Msa1305110:intron | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | + | chr8_3:68479031-68479050 | Msa1305110:intron | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | + | chr8_3:68479032-68479051 | Msa1305110:intron | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | - | chr8_3:68479059-68479078 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | + | chr8_3:68479072-68479091 | Msa1305110:intron | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | - | chr8_3:68479083-68479102 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | + | chr8_3:68479219-68479238 | Msa1305110:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | + | chr8_3:68479253-68479272 | Msa1305110:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | + | chr8_3:68479300-68479319 | Msa1305110:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | - | chr8_3:68479430-68479449 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | + | chr8_3:68479430-68479449 | Msa1305110:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | + | chr8_3:68479482-68479501 | Msa1305110:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | + | chr8_3:68479883-68479902 | Msa1305110:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | - | chr8_3:68479896-68479915 | None:intergenic | 35.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | - | chr8_3:68477768-68477787 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | - | chr8_3:68477856-68477875 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | + | chr8_3:68477859-68477878 | Msa1305110:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | + | chr8_3:68477885-68477904 | Msa1305110:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | + | chr8_3:68477996-68478015 | Msa1305110:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | + | chr8_3:68478133-68478152 | Msa1305110:CDS | 35.0% |
| ! | AGTTCCAACAATGCACTTTT+CGG | - | chr8_3:68478384-68478403 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | + | chr8_3:68478572-68478591 | Msa1305110:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | - | chr8_3:68478582-68478601 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | + | chr8_3:68478608-68478627 | Msa1305110:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | + | chr8_3:68478880-68478899 | Msa1305110:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | + | chr8_3:68478904-68478923 | Msa1305110:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | + | chr8_3:68478905-68478924 | Msa1305110:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | - | chr8_3:68478971-68478990 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | + | chr8_3:68479027-68479046 | Msa1305110:intron | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | + | chr8_3:68479031-68479050 | Msa1305110:intron | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | + | chr8_3:68479032-68479051 | Msa1305110:intron | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | - | chr8_3:68479059-68479078 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | + | chr8_3:68479072-68479091 | Msa1305110:intron | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | - | chr8_3:68479083-68479102 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | + | chr8_3:68479219-68479238 | Msa1305110:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | + | chr8_3:68479253-68479272 | Msa1305110:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | + | chr8_3:68479300-68479319 | Msa1305110:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | - | chr8_3:68479430-68479449 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | + | chr8_3:68479430-68479449 | Msa1305110:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | + | chr8_3:68479482-68479501 | Msa1305110:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | + | chr8_3:68479883-68479902 | Msa1305110:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | - | chr8_3:68479896-68479915 | None:intergenic | 35.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | - | chr8_3:68477762-68477781 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | - | chr8_3:68477861-68477880 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | + | chr8_3:68477858-68477877 | Msa1305110:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | + | chr8_3:68477922-68477941 | Msa1305110:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | + | chr8_3:68477923-68477942 | Msa1305110:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | + | chr8_3:68477945-68477964 | Msa1305110:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | + | chr8_3:68477971-68477990 | Msa1305110:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | + | chr8_3:68478004-68478023 | Msa1305110:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | + | chr8_3:68478134-68478153 | Msa1305110:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | + | chr8_3:68478226-68478245 | Msa1305110:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | + | chr8_3:68478383-68478402 | Msa1305110:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | + | chr8_3:68478562-68478581 | Msa1305110:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | - | chr8_3:68478583-68478602 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | - | chr8_3:68478692-68478711 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | + | chr8_3:68478718-68478737 | Msa1305110:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | - | chr8_3:68478808-68478827 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | - | chr8_3:68478839-68478858 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | + | chr8_3:68478879-68478898 | Msa1305110:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | + | chr8_3:68478925-68478944 | Msa1305110:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | - | chr8_3:68478963-68478982 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | + | chr8_3:68479033-68479052 | Msa1305110:intron | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | + | chr8_3:68479150-68479169 | Msa1305110:intron | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | - | chr8_3:68479172-68479191 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | - | chr8_3:68479228-68479247 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | - | chr8_3:68479250-68479269 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | + | chr8_3:68479252-68479271 | Msa1305110:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | + | chr8_3:68479254-68479273 | Msa1305110:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | - | chr8_3:68479282-68479301 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | + | chr8_3:68479310-68479329 | Msa1305110:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | + | chr8_3:68479368-68479387 | Msa1305110:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | - | chr8_3:68479450-68479469 | None:intergenic | 40.0% | |
| GGATATTTGAACCCGAGTAT+CGG | + | chr8_3:68479451-68479470 | Msa1305110:CDS | 40.0% | |
| GATATTTGAACCCGAGTATC+GGG | + | chr8_3:68479452-68479471 | Msa1305110:CDS | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | + | chr8_3:68479473-68479492 | Msa1305110:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | + | chr8_3:68479575-68479594 | Msa1305110:intron | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | - | chr8_3:68479594-68479613 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | + | chr8_3:68479611-68479630 | Msa1305110:intron | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | + | chr8_3:68479616-68479635 | Msa1305110:intron | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | - | chr8_3:68479627-68479646 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | + | chr8_3:68479745-68479764 | Msa1305110:intron | 40.0% |
| AGTACTCGGAACTACGATAT+TGG | + | chr8_3:68479759-68479778 | Msa1305110:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | + | chr8_3:68479782-68479801 | Msa1305110:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | - | chr8_3:68479813-68479832 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | - | chr8_3:68479875-68479894 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | + | chr8_3:68479887-68479906 | Msa1305110:CDS | 40.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | - | chr8_3:68477762-68477781 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | - | chr8_3:68477861-68477880 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | + | chr8_3:68477858-68477877 | Msa1305110:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | + | chr8_3:68477922-68477941 | Msa1305110:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | + | chr8_3:68477923-68477942 | Msa1305110:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | + | chr8_3:68477945-68477964 | Msa1305110:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | + | chr8_3:68477971-68477990 | Msa1305110:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | + | chr8_3:68478004-68478023 | Msa1305110:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | + | chr8_3:68478134-68478153 | Msa1305110:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | + | chr8_3:68478226-68478245 | Msa1305110:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | + | chr8_3:68478383-68478402 | Msa1305110:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | + | chr8_3:68478562-68478581 | Msa1305110:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | - | chr8_3:68478583-68478602 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | - | chr8_3:68478692-68478711 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | + | chr8_3:68478718-68478737 | Msa1305110:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | - | chr8_3:68478808-68478827 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | - | chr8_3:68478839-68478858 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | + | chr8_3:68478879-68478898 | Msa1305110:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | + | chr8_3:68478925-68478944 | Msa1305110:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | - | chr8_3:68478963-68478982 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | + | chr8_3:68479033-68479052 | Msa1305110:intron | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | + | chr8_3:68479150-68479169 | Msa1305110:intron | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | - | chr8_3:68479172-68479191 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | - | chr8_3:68479228-68479247 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | - | chr8_3:68479250-68479269 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | + | chr8_3:68479252-68479271 | Msa1305110:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | + | chr8_3:68479254-68479273 | Msa1305110:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | - | chr8_3:68479282-68479301 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | + | chr8_3:68479310-68479329 | Msa1305110:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | + | chr8_3:68479368-68479387 | Msa1305110:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | - | chr8_3:68479450-68479469 | None:intergenic | 40.0% | |
| GGATATTTGAACCCGAGTAT+CGG | + | chr8_3:68479451-68479470 | Msa1305110:CDS | 40.0% | |
| GATATTTGAACCCGAGTATC+GGG | + | chr8_3:68479452-68479471 | Msa1305110:CDS | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | + | chr8_3:68479473-68479492 | Msa1305110:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | + | chr8_3:68479575-68479594 | Msa1305110:intron | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | - | chr8_3:68479594-68479613 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | + | chr8_3:68479611-68479630 | Msa1305110:intron | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | + | chr8_3:68479616-68479635 | Msa1305110:intron | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | - | chr8_3:68479627-68479646 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | + | chr8_3:68479745-68479764 | Msa1305110:intron | 40.0% |
| AGTACTCGGAACTACGATAT+TGG | + | chr8_3:68479759-68479778 | Msa1305110:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | + | chr8_3:68479782-68479801 | Msa1305110:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | - | chr8_3:68479813-68479832 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | - | chr8_3:68479875-68479894 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | + | chr8_3:68479887-68479906 | Msa1305110:CDS | 40.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | + | chr8_3:68477888-68477907 | Msa1305110:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | - | chr8_3:68477957-68477976 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | - | chr8_3:68477981-68478000 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | + | chr8_3:68477987-68478006 | Msa1305110:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | - | chr8_3:68477991-68478010 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | - | chr8_3:68478024-68478043 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | + | chr8_3:68478023-68478042 | Msa1305110:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | + | chr8_3:68478166-68478185 | Msa1305110:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | + | chr8_3:68478169-68478188 | Msa1305110:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | - | chr8_3:68478206-68478225 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | + | chr8_3:68478357-68478376 | Msa1305110:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | + | chr8_3:68478388-68478407 | Msa1305110:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | - | chr8_3:68478453-68478472 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | + | chr8_3:68478677-68478696 | Msa1305110:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | + | chr8_3:68478891-68478910 | Msa1305110:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | - | chr8_3:68478941-68478960 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | + | chr8_3:68478949-68478968 | Msa1305110:CDS | 45.0% | |
| TACGAGCTATACTGGGATTC+AGG | + | chr8_3:68478984-68479003 | Msa1305110:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | + | chr8_3:68478999-68479018 | Msa1305110:intron | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | + | chr8_3:68479055-68479074 | Msa1305110:intron | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | + | chr8_3:68479151-68479170 | Msa1305110:intron | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | + | chr8_3:68479236-68479255 | Msa1305110:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | - | chr8_3:68479249-68479268 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | + | chr8_3:68479276-68479295 | Msa1305110:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | - | chr8_3:68479283-68479302 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | + | chr8_3:68479309-68479328 | Msa1305110:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | + | chr8_3:68479615-68479634 | Msa1305110:intron | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | - | chr8_3:68479626-68479645 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | - | chr8_3:68479628-68479647 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | + | chr8_3:68479626-68479645 | Msa1305110:intron | 45.0% | |
| ACTCGGAACTACGATATTGG+AGG | + | chr8_3:68479762-68479781 | Msa1305110:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | - | chr8_3:68479801-68479820 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | + | chr8_3:68479830-68479849 | Msa1305110:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | + | chr8_3:68479836-68479855 | Msa1305110:CDS | 45.0% |
| TTGAGTTATTTGGGTCCTGG+AGG | + | chr8_3:68477888-68477907 | Msa1305110:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | - | chr8_3:68477957-68477976 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | - | chr8_3:68477981-68478000 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | + | chr8_3:68477987-68478006 | Msa1305110:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | - | chr8_3:68477991-68478010 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | - | chr8_3:68478024-68478043 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | + | chr8_3:68478023-68478042 | Msa1305110:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | + | chr8_3:68478166-68478185 | Msa1305110:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | + | chr8_3:68478169-68478188 | Msa1305110:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | - | chr8_3:68478206-68478225 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | + | chr8_3:68478357-68478376 | Msa1305110:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | + | chr8_3:68478388-68478407 | Msa1305110:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | - | chr8_3:68478453-68478472 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | + | chr8_3:68478677-68478696 | Msa1305110:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | + | chr8_3:68478891-68478910 | Msa1305110:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | - | chr8_3:68478941-68478960 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | + | chr8_3:68478949-68478968 | Msa1305110:CDS | 45.0% | |
| TACGAGCTATACTGGGATTC+AGG | + | chr8_3:68478984-68479003 | Msa1305110:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | + | chr8_3:68478999-68479018 | Msa1305110:intron | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | + | chr8_3:68479055-68479074 | Msa1305110:intron | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | + | chr8_3:68479151-68479170 | Msa1305110:intron | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | + | chr8_3:68479236-68479255 | Msa1305110:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | - | chr8_3:68479249-68479268 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | + | chr8_3:68479276-68479295 | Msa1305110:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | - | chr8_3:68479283-68479302 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | + | chr8_3:68479309-68479328 | Msa1305110:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | + | chr8_3:68479615-68479634 | Msa1305110:intron | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | - | chr8_3:68479626-68479645 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | - | chr8_3:68479628-68479647 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | + | chr8_3:68479626-68479645 | Msa1305110:intron | 45.0% | |
| ACTCGGAACTACGATATTGG+AGG | + | chr8_3:68479762-68479781 | Msa1305110:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | - | chr8_3:68479801-68479820 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | + | chr8_3:68479830-68479849 | Msa1305110:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | + | chr8_3:68479836-68479855 | Msa1305110:CDS | 45.0% |
| TTTGGGTCCTGGAGGATTGA+CGG | + | chr8_3:68477896-68477915 | Msa1305110:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | - | chr8_3:68477953-68477972 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | + | chr8_3:68477975-68477994 | Msa1305110:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | + | chr8_3:68478018-68478037 | Msa1305110:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | + | chr8_3:68478030-68478049 | Msa1305110:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | + | chr8_3:68478031-68478050 | Msa1305110:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | - | chr8_3:68478050-68478069 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | - | chr8_3:68478371-68478390 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | + | chr8_3:68478377-68478396 | Msa1305110:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | + | chr8_3:68478400-68478419 | Msa1305110:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | - | chr8_3:68478418-68478437 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | - | chr8_3:68478426-68478445 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | + | chr8_3:68478788-68478807 | Msa1305110:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | + | chr8_3:68478890-68478909 | Msa1305110:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | + | chr8_3:68478892-68478911 | Msa1305110:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | - | chr8_3:68478960-68478979 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | + | chr8_3:68479168-68479187 | Msa1305110:intron | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | - | chr8_3:68479269-68479288 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | - | chr8_3:68479270-68479289 | None:intergenic | 50.0% |
| TTCCGCTCTTTCCCGATACT+CGG | - | chr8_3:68479466-68479485 | None:intergenic | 50.0% | |
| AAAGGAAGGGCGAAACAAGG+AGG | + | chr8_3:68479629-68479648 | Msa1305110:intron | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | + | chr8_3:68479641-68479660 | Msa1305110:intron | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | + | chr8_3:68479658-68479677 | Msa1305110:intron | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | - | chr8_3:68479795-68479814 | None:intergenic | 50.0% |
| TTTGGGTCCTGGAGGATTGA+CGG | + | chr8_3:68477896-68477915 | Msa1305110:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | - | chr8_3:68477953-68477972 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | + | chr8_3:68477975-68477994 | Msa1305110:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | + | chr8_3:68478018-68478037 | Msa1305110:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | + | chr8_3:68478030-68478049 | Msa1305110:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | + | chr8_3:68478031-68478050 | Msa1305110:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | - | chr8_3:68478050-68478069 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | - | chr8_3:68478371-68478390 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | + | chr8_3:68478377-68478396 | Msa1305110:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | + | chr8_3:68478400-68478419 | Msa1305110:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | - | chr8_3:68478418-68478437 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | - | chr8_3:68478426-68478445 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | + | chr8_3:68478788-68478807 | Msa1305110:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | + | chr8_3:68478890-68478909 | Msa1305110:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | + | chr8_3:68478892-68478911 | Msa1305110:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | - | chr8_3:68478960-68478979 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | + | chr8_3:68479168-68479187 | Msa1305110:intron | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | - | chr8_3:68479269-68479288 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | - | chr8_3:68479270-68479289 | None:intergenic | 50.0% |
| TTCCGCTCTTTCCCGATACT+CGG | - | chr8_3:68479466-68479485 | None:intergenic | 50.0% | |
| AAAGGAAGGGCGAAACAAGG+AGG | + | chr8_3:68479629-68479648 | Msa1305110:intron | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | + | chr8_3:68479641-68479660 | Msa1305110:intron | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | + | chr8_3:68479658-68479677 | Msa1305110:intron | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | - | chr8_3:68479795-68479814 | None:intergenic | 50.0% |
| TTGGGTCCTGGAGGATTGAC+GGG | + | chr8_3:68477897-68477916 | Msa1305110:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | + | chr8_3:68477916-68477935 | Msa1305110:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | + | chr8_3:68478032-68478051 | Msa1305110:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | + | chr8_3:68478033-68478052 | Msa1305110:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | + | chr8_3:68478413-68478432 | Msa1305110:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | - | chr8_3:68478444-68478463 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | + | chr8_3:68478623-68478642 | Msa1305110:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | + | chr8_3:68478626-68478645 | Msa1305110:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | + | chr8_3:68478640-68478659 | Msa1305110:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | + | chr8_3:68478641-68478660 | Msa1305110:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | + | chr8_3:68479159-68479178 | Msa1305110:intron | 55.0% | |
| !! | ACCCGAGTATCGGGAAAGAG+CGG | + | chr8_3:68479461-68479480 | Msa1305110:CDS | 55.0% |
| TCCGCTCTTTCCCGATACTC+GGG | - | chr8_3:68479465-68479484 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | + | chr8_3:68479636-68479655 | Msa1305110:intron | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | + | chr8_3:68479637-68479656 | Msa1305110:intron | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | + | chr8_3:68479649-68479668 | Msa1305110:intron | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | + | chr8_3:68479652-68479671 | Msa1305110:intron | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | + | chr8_3:68479657-68479676 | Msa1305110:intron | 55.0% | |
| TTGGGTCCTGGAGGATTGAC+GGG | + | chr8_3:68477897-68477916 | Msa1305110:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | + | chr8_3:68477916-68477935 | Msa1305110:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | + | chr8_3:68478032-68478051 | Msa1305110:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | + | chr8_3:68478033-68478052 | Msa1305110:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | + | chr8_3:68478413-68478432 | Msa1305110:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | - | chr8_3:68478444-68478463 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | + | chr8_3:68478623-68478642 | Msa1305110:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | + | chr8_3:68478626-68478645 | Msa1305110:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | + | chr8_3:68478640-68478659 | Msa1305110:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | + | chr8_3:68478641-68478660 | Msa1305110:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | + | chr8_3:68479159-68479178 | Msa1305110:intron | 55.0% | |
| !! | ACCCGAGTATCGGGAAAGAG+CGG | + | chr8_3:68479461-68479480 | Msa1305110:CDS | 55.0% |
| TCCGCTCTTTCCCGATACTC+GGG | - | chr8_3:68479465-68479484 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | + | chr8_3:68479636-68479655 | Msa1305110:intron | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | + | chr8_3:68479637-68479656 | Msa1305110:intron | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | + | chr8_3:68479649-68479668 | Msa1305110:intron | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | + | chr8_3:68479652-68479671 | Msa1305110:intron | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | + | chr8_3:68479657-68479676 | Msa1305110:intron | 55.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | + | chr8_3:68477898-68477917 | Msa1305110:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | - | chr8_3:68478443-68478462 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | - | chr8_3:68479042-68479061 | None:intergenic | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | + | chr8_3:68479667-68479686 | Msa1305110:intron | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | + | chr8_3:68479668-68479687 | Msa1305110:intron | 60.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | + | chr8_3:68477898-68477917 | Msa1305110:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | - | chr8_3:68478443-68478462 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | - | chr8_3:68479042-68479061 | None:intergenic | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | + | chr8_3:68479667-68479686 | Msa1305110:intron | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | + | chr8_3:68479668-68479687 | Msa1305110:intron | 60.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | - | chr8_3:68477906-68477925 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | + | chr8_3:68478440-68478459 | Msa1305110:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | + | chr8_3:68479669-68479688 | Msa1305110:intron | 65.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | - | chr8_3:68477906-68477925 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | + | chr8_3:68478440-68478459 | Msa1305110:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | + | chr8_3:68479669-68479688 | Msa1305110:intron | 65.0% | |
| GGTTTGGGCGCTCGAGGGGT+CGG | + | chr8_3:68479673-68479692 | Msa1305110:intron | 70.0% | |
| GGTTTGGGCGCTCGAGGGGT+CGG | + | chr8_3:68479673-68479692 | Msa1305110:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 68477609 | 68479917 | 68477609 | ID=Msa1305110;Name=Msa1305110 |
| chr8_3 | mRNA | 68477609 | 68479917 | 68477609 | ID=Msa1305110-mRNA-1;Parent=Msa1305110;Name=Msa1305110-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|3|0|624 |
| chr8_3 | exon | 68477609 | 68479005 | 68477609 | ID=Msa1305110-mRNA-1:exon:21173;Parent=Msa1305110-mRNA-1 |
| chr8_3 | exon | 68479215 | 68479523 | 68479215 | ID=Msa1305110-mRNA-1:exon:21174;Parent=Msa1305110-mRNA-1 |
| chr8_3 | exon | 68479749 | 68479917 | 68479749 | ID=Msa1305110-mRNA-1:exon:21175;Parent=Msa1305110-mRNA-1 |
| chr8_3 | CDS | 68477609 | 68479005 | 68477609 | ID=Msa1305110-mRNA-1:cds;Parent=Msa1305110-mRNA-1 |
| chr8_3 | CDS | 68479215 | 68479523 | 68479215 | ID=Msa1305110-mRNA-1:cds;Parent=Msa1305110-mRNA-1 |
| chr8_3 | CDS | 68479749 | 68479917 | 68479749 | ID=Msa1305110-mRNA-1:cds;Parent=Msa1305110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
