Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355110 | YP_009327948.1 | 100.000 | 805 | 0 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355110 | sp|Q9BBS9|RPOB_LOTJA | 92.919 | 805 | 57 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355110 | A0A1J0I0H8 | 100.000 | 805 | 0 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1659 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094170 | Msa1355110 | 0.800604 | 1.333319e-48 | -8.615850e-47 |
| Msa0095150 | Msa1355110 | 0.805165 | 1.523079e-49 | -8.615850e-47 |
| Msa0095280 | Msa1355110 | 0.823047 | 1.709409e-53 | -8.615850e-47 |
| Msa0095290 | Msa1355110 | 0.804602 | 1.996113e-49 | -8.615850e-47 |
| Msa1354860 | Msa1355110 | 0.830124 | 3.503428e-55 | -8.615850e-47 |
| Msa1354870 | Msa1355110 | 0.813505 | 2.473708e-51 | -8.615850e-47 |
| Msa1354940 | Msa1355110 | 0.888281 | 6.783654e-73 | -8.615850e-47 |
| Msa1355030 | Msa1355110 | 0.821110 | 4.805145e-53 | -8.615850e-47 |
| Msa1355110 | Msa1380550 | 0.802403 | 5.703351e-49 | -8.615850e-47 |
| Msa1355110 | Msa1380560 | 0.822063 | 2.893881e-53 | -8.615850e-47 |
| Msa1355110 | Msa1380630 | 0.868787 | 5.036433e-66 | -8.615850e-47 |
| Msa1355110 | Msa1380670 | 0.830512 | 2.816270e-55 | -8.615850e-47 |
| Msa1355110 | Msa1380680 | 0.820288 | 7.425461e-53 | -8.615850e-47 |
| Msa1355110 | Msa1380690 | 0.833129 | 6.368517e-56 | -8.615850e-47 |
| Msa1355110 | Msa1380700 | 0.870110 | 1.868859e-66 | -8.615850e-47 |
| Msa1355110 | Msa1394070 | 0.813096 | 3.042255e-51 | -8.615850e-47 |
| Msa1355110 | Msa1394110 | 0.842387 | 2.667923e-58 | -8.615850e-47 |
| Msa1355110 | Msa1394120 | 0.809980 | 1.447263e-50 | -8.615850e-47 |
| Msa1355110 | Msa1394260 | 0.809825 | 1.562603e-50 | -8.615850e-47 |
| Msa1355110 | Msa1452230 | 0.803457 | 3.454951e-49 | -8.615850e-47 |
| Msa0652270 | Msa1355110 | 0.801286 | 9.675243e-49 | -8.615850e-47 |
| Msa0139770 | Msa1355110 | 0.852007 | 6.123339e-61 | -8.615850e-47 |
| Msa0139790 | Msa1355110 | 0.828902 | 6.945419e-55 | -8.615850e-47 |
| Msa0139800 | Msa1355110 | 0.811679 | 6.205986e-51 | -8.615850e-47 |
| Msa0139810 | Msa1355110 | 0.834177 | 3.485284e-56 | -8.615850e-47 |
| Msa0139830 | Msa1355110 | 0.884912 | 1.277688e-71 | -8.615850e-47 |
| Msa0221840 | Msa1355110 | 0.805553 | 1.262719e-49 | -8.615850e-47 |
| Msa1264300 | Msa1355110 | 0.801195 | 1.009524e-48 | -8.615850e-47 |
| Msa1305100 | Msa1355110 | 0.873444 | 1.464076e-67 | -8.615850e-47 |
| Msa1305110 | Msa1355110 | 0.844275 | 8.363976e-59 | -8.615850e-47 |
| Msa1305150 | Msa1355110 | 0.875803 | 2.309189e-68 | -8.615850e-47 |
| Msa1342050 | Msa1355110 | 0.806681 | 7.309074e-50 | -8.615850e-47 |
| Msa0983680 | Msa1355110 | 0.830662 | 2.588375e-55 | -8.615850e-47 |
| Msa0983690 | Msa1355110 | 0.815689 | 8.128335e-52 | -8.615850e-47 |
| Msa1044520 | Msa1355110 | 0.801426 | 9.057182e-49 | -8.615850e-47 |
| Msa1086040 | Msa1355110 | 0.807933 | 3.966900e-50 | -8.615850e-47 |
| Msa1086090 | Msa1355110 | 0.805579 | 1.247112e-49 | -8.615850e-47 |
| Msa1086110 | Msa1355110 | 0.871972 | 4.546680e-67 | -8.615850e-47 |
| Msa1086130 | Msa1355110 | 0.918004 | 2.657845e-86 | -8.615850e-47 |
| Msa1086220 | Msa1355110 | 0.888939 | 3.782070e-73 | -8.615850e-47 |
| Msa1086240 | Msa1355110 | 0.839961 | 1.158610e-57 | -8.615850e-47 |
| Msa1086310 | Msa1355110 | 0.800283 | 1.549829e-48 | -8.615850e-47 |
| Msa1086450 | Msa1355110 | 0.812136 | 4.933545e-51 | -8.615850e-47 |
| Msa1086470 | Msa1355110 | 0.809815 | 1.570161e-50 | -8.615850e-47 |
| Msa1086500 | Msa1355110 | 0.804221 | 2.396681e-49 | -8.615850e-47 |
| Msa1086510 | Msa1355110 | 0.809101 | 2.234131e-50 | -8.615850e-47 |
| Msa1086880 | Msa1355110 | 0.813524 | 2.450548e-51 | -8.615850e-47 |
| Msa1086930 | Msa1355110 | 0.853022 | 3.145024e-61 | -8.615850e-47 |
| Msa0268350 | Msa1355110 | 0.817963 | 2.510303e-52 | -8.615850e-47 |
| Msa0268430 | Msa1355110 | 0.811387 | 7.182334e-51 | -8.615850e-47 |
| Msa0268440 | Msa1355110 | 0.805680 | 1.187838e-49 | -8.615850e-47 |
| Msa0268520 | Msa1355110 | 0.800538 | 1.375269e-48 | -8.615850e-47 |
| Msa0268570 | Msa1355110 | 0.801695 | 7.973625e-49 | -8.615850e-47 |
| Msa0268590 | Msa1355110 | 0.848930 | 4.477869e-60 | -8.615850e-47 |
| Msa0268610 | Msa1355110 | 0.860108 | 2.598918e-63 | -8.615850e-47 |
| Msa0268780 | Msa1355110 | 0.807226 | 5.605100e-50 | -8.615850e-47 |
| Msa0268820 | Msa1355110 | 0.843371 | 1.460476e-58 | -8.615850e-47 |
| Msa0268860 | Msa1355110 | 0.808072 | 3.706422e-50 | -8.615850e-47 |
| Msa0268870 | Msa1355110 | 0.800167 | 1.636310e-48 | -8.615850e-47 |
| Msa0268990 | Msa1355110 | 0.835120 | 2.018221e-56 | -8.615850e-47 |
| Msa0269030 | Msa1355110 | 0.814412 | 1.561370e-51 | -8.615850e-47 |
| Msa0269070 | Msa1355110 | 0.803709 | 3.062825e-49 | -8.615850e-47 |
| Msa0293070 | Msa1355110 | 0.802667 | 5.031411e-49 | -8.615850e-47 |
| Msa0344130 | Msa1355110 | 0.821296 | 4.352941e-53 | -8.615850e-47 |
| Msa0344260 | Msa1355110 | 0.805103 | 1.569287e-49 | -8.615850e-47 |
| Msa0344320 | Msa1355110 | 0.819818 | 9.510775e-53 | -8.615850e-47 |
| Msa1143110 | Msa1355110 | 0.859485 | 4.004906e-63 | -8.615850e-47 |
| Msa1143170 | Msa1355110 | 0.806049 | 9.936191e-50 | -8.615850e-47 |
| Msa1143190 | Msa1355110 | 0.859843 | 3.123722e-63 | -8.615850e-47 |
| Msa0484000 | Msa1355110 | 0.825218 | 5.283266e-54 | -8.615850e-47 |
| Msa0556690 | Msa1355110 | 0.812508 | 4.092679e-51 | -8.615850e-47 |
| Msa0582500 | Msa1355110 | 0.875379 | 3.228583e-68 | -8.615850e-47 |
| Msa0582540 | Msa1355110 | 0.815247 | 1.019632e-51 | -8.615850e-47 |
| Msa0582560 | Msa1355110 | 0.800333 | 1.514085e-48 | -8.615850e-47 |
| Msa0582630 | Msa1355110 | 0.801188 | 1.012828e-48 | -8.615850e-47 |
| Msa0582650 | Msa1355110 | 0.809370 | 1.956696e-50 | -8.615850e-47 |
| Msa0582670 | Msa1355110 | 0.866364 | 3.010483e-65 | -8.615850e-47 |
| Msa0582680 | Msa1355110 | 0.873803 | 1.107925e-67 | -8.615850e-47 |
| Msa0582750 | Msa1355110 | 0.808684 | 2.744320e-50 | -8.615850e-47 |
| Msa0582790 | Msa1355110 | 0.854382 | 1.277876e-61 | -8.615850e-47 |
| Msa0582800 | Msa1355110 | 0.862792 | 3.943527e-64 | -8.615850e-47 |
| Msa0921030 | Msa1355110 | 0.816387 | 5.677760e-52 | -8.615850e-47 |
| Msa0924880 | Msa1355110 | 0.808107 | 3.642943e-50 | -8.615850e-47 |
| Msa0931060 | Msa1355110 | 0.893045 | 9.053733e-75 | -8.615850e-47 |
| Msa0931110 | Msa1355110 | 0.822706 | 2.052528e-53 | -8.615850e-47 |
| Msa0931120 | Msa1355110 | 0.876491 | 1.338279e-68 | -8.615850e-47 |
| Msa0931180 | Msa1355110 | 0.815807 | 7.649561e-52 | -8.615850e-47 |
| Msa0931210 | Msa1355110 | 0.805715 | 1.167796e-49 | -8.615850e-47 |
| Msa0931250 | Msa1355110 | 0.869953 | 2.102646e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355110 | MtrunA17_Chr4g0016641 | 99.379 | 805 | 5 | 0 | 1 | 805 | 271 | 1075 | 0.0 | 1645 |
| Msa1355110 | MtrunA17_CPg0493041 | 99.379 | 805 | 5 | 0 | 1 | 805 | 271 | 1075 | 0.0 | 1645 |
| Msa1355110 | MtrunA17_Chr4g0015531 | 78.804 | 368 | 4 | 3 | 31 | 398 | 1 | 294 | 0.0 | 562 |
| Msa1355110 | MtrunA17_Chr1g0159041 | 66.279 | 430 | 37 | 3 | 201 | 630 | 1 | 322 | 0.0 | 538 |
| Msa1355110 | MtrunA17_Chr4g0015541 | 87.619 | 210 | 2 | 1 | 596 | 805 | 1 | 186 | 9.08e-121 | 366 |
| Msa1355110 | MtrunA17_Chr1g0159051 | 94.286 | 105 | 6 | 0 | 4 | 108 | 12 | 116 | 1.28e-61 | 203 |
| Msa1355110 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 355 | 432 | 1 | 78 | 7.57e-47 | 161 |
| Msa1355110 | MtrunA17_Chr8g0345421 | 28.673 | 422 | 257 | 9 | 383 | 786 | 728 | 1123 | 7.76e-37 | 149 |
| Msa1355110 | MtrunA17_Chr1g0155911 | 26.829 | 369 | 235 | 6 | 383 | 746 | 782 | 1120 | 3.47e-35 | 144 |
| Msa1355110 | MtrunA17_Chr3g0136911 | 25.147 | 509 | 293 | 17 | 317 | 788 | 724 | 1181 | 5.11e-28 | 121 |
| Msa1355110 | MtrunA17_Chr8g0375171 | 24.754 | 509 | 295 | 17 | 317 | 788 | 722 | 1179 | 1.34e-27 | 120 |
| Msa1355110 | MtrunA17_Chr4g0069391 | 25.635 | 394 | 251 | 9 | 383 | 771 | 786 | 1142 | 3.11e-27 | 119 |
| Msa1355110 | MtrunA17_Chr3g0142431 | 27.381 | 252 | 146 | 6 | 559 | 788 | 2 | 238 | 6.21e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355110 | ATCG00190.1 | 90.458 | 807 | 75 | 1 | 1 | 805 | 266 | 1072 | 0.0 | 1524 |
| Msa1355110 | AT4G21710.1 | 26.651 | 424 | 261 | 8 | 383 | 786 | 779 | 1172 | 1.86e-37 | 152 |
| Msa1355110 | AT5G45140.2 | 27.553 | 421 | 262 | 8 | 383 | 784 | 754 | 1150 | 4.12e-35 | 144 |
| Msa1355110 | AT5G45140.1 | 27.553 | 421 | 262 | 8 | 383 | 784 | 754 | 1150 | 4.12e-35 | 144 |
| Msa1355110 | AT1G29940.1 | 27.200 | 375 | 220 | 12 | 387 | 747 | 756 | 1091 | 1.86e-25 | 114 |
| Msa1355110 | AT3G23780.1 | 24.036 | 441 | 254 | 9 | 387 | 789 | 769 | 1166 | 5.63e-25 | 112 |
| Msa1355110 | AT3G23780.2 | 24.036 | 441 | 254 | 9 | 387 | 789 | 769 | 1166 | 5.63e-25 | 112 |
| Msa1355110 | AT3G18090.1 | 24.194 | 434 | 263 | 9 | 387 | 789 | 651 | 1049 | 1.87e-24 | 110 |
| Msa1355110 | AT3G18090.2 | 24.444 | 225 | 137 | 3 | 387 | 606 | 651 | 847 | 4.17e-13 | 73.9 |
| Msa1355110 | AT3G18090.3 | 24.444 | 225 | 137 | 3 | 387 | 606 | 651 | 847 | 5.37e-13 | 73.6 |
Find 189 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | tig0014543:-724500 | Msa1355110:CDS |
| TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | tig0014543:+723525 | None:intergenic |
| CATTTGATTGGAATGAAATT+TGG | 0.153768 | tig0014543:-724793 | Msa1355110:CDS |
| CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | tig0014543:+722748 | None:intergenic |
| GTTACACAACAACCCCTTAA+AGG | 0.212213 | tig0014543:-722762 | Msa1355110:CDS |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | tig0014543:+722947 | None:intergenic |
| ATATATATATGAATCGTTTC+TGG | 0.228166 | tig0014543:+723266 | None:intergenic |
| GAACGTTGATATCTAATTAA+TGG | 0.244746 | tig0014543:+723848 | None:intergenic |
| TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | tig0014543:-722861 | Msa1355110:CDS |
| TGAATTAATTTCAAGATATA+AGG | 0.248171 | tig0014543:+722834 | None:intergenic |
| GGAATCAATGTAGGACTTAT+TGG | 0.263649 | tig0014543:-724382 | Msa1355110:CDS |
| ACGAGCTATACTTGGGATTC+AGG | 0.269809 | tig0014543:-723390 | Msa1355110:CDS |
| AGCACTGAATCGAGGTATTC+AGG | 0.270037 | tig0014543:-724212 | Msa1355110:CDS |
| GATCTATTACAAGATCAATT+TGG | 0.270369 | tig0014543:-724712 | Msa1355110:CDS |
| GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | tig0014543:+724589 | None:intergenic |
| CGATCTAAAACTTGAGATAA+TGG | 0.281648 | tig0014543:+724550 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | tig0014543:+723149 | None:intergenic |
| TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | tig0014543:+722749 | None:intergenic |
| ATAATTCGAGGAACTATATC+TGG | 0.305120 | tig0014543:-724664 | Msa1355110:CDS |
| GCATCATTATGCTCGATAAA+AGG | 0.305503 | tig0014543:+724073 | None:intergenic |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | tig0014543:+723107 | None:intergenic |
| GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | tig0014543:-724499 | Msa1355110:CDS |
| TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | tig0014543:+722903 | None:intergenic |
| CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | tig0014543:-723962 | Msa1355110:CDS |
| TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | tig0014543:-723735 | Msa1355110:CDS |
| CGCATTTACCTTTATGAACC+TGG | 0.329782 | tig0014543:+723795 | None:intergenic |
| AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | tig0014543:+723925 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | tig0014543:-722891 | Msa1355110:CDS |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | tig0014543:-723087 | Msa1355110:CDS |
| AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | tig0014543:+722478 | None:intergenic |
| TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | tig0014543:+722579 | None:intergenic |
| TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | tig0014543:-724347 | Msa1355110:CDS |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | tig0014543:+722561 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | tig0014543:-723121 | Msa1355110:CDS |
| GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | tig0014543:-724018 | Msa1355110:CDS |
| CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | tig0014543:-723485 | Msa1355110:CDS |
| CCATGAACTATTTGGGTCAA+TGG | 0.354074 | tig0014543:+724520 | None:intergenic |
| GTACTCGGAACTACGATTAT+TGG | 0.356639 | tig0014543:-722612 | Msa1355110:CDS |
| CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | tig0014543:-723998 | Msa1355110:CDS |
| AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | tig0014543:+723952 | None:intergenic |
| CGTTCGAGAACTACGATCTT+TGG | 0.364953 | tig0014543:-722541 | Msa1355110:CDS |
| TATGCTCGATAAAAGGAATC+AGG | 0.367331 | tig0014543:+724080 | None:intergenic |
| TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | tig0014543:+722911 | None:intergenic |
| TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | tig0014543:-724481 | Msa1355110:CDS |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | tig0014543:-723065 | Msa1355110:CDS |
| ACAGCTGCGGATCATTTGAT+TGG | 0.389432 | tig0014543:-724805 | Msa1355110:CDS |
| GATATTTGAACCCGAGTATC+CGG | 0.389575 | tig0014543:-722922 | Msa1355110:CDS |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | tig0014543:-723122 | Msa1355110:CDS |
| GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | tig0014543:-722699 | Msa1355110:CDS |
| GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | tig0014543:-723734 | Msa1355110:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | tig0014543:-723138 | Msa1355110:CDS |
| ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | tig0014543:+724400 | None:intergenic |
| AGATTATTACGAGCTATACT+TGG | 0.409704 | tig0014543:-723398 | Msa1355110:CDS |
| TGTAGGACTTATTGGATCCT+TGG | 0.411030 | tig0014543:-724374 | Msa1355110:CDS |
| TCTAACTATTGCATGGGAAC+AGG | 0.414074 | tig0014543:-724152 | Msa1355110:CDS |
| GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | tig0014543:-723992 | Msa1355110:CDS |
| TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | tig0014543:-724348 | Msa1355110:CDS |
| TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | tig0014543:-724482 | Msa1355110:CDS |
| GAATTGTGATTCTGGGATCT+TGG | 0.426630 | tig0014543:-723496 | Msa1355110:CDS |
| ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | tig0014543:-722705 | Msa1355110:CDS |
| GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | tig0014543:+723526 | None:intergenic |
| AACTATTTGGGTCAATGGAT+TGG | 0.429624 | tig0014543:+724525 | None:intergenic |
| GCCGGGAGACATGGAAATAA+AGG | 0.429982 | tig0014543:-723206 | Msa1355110:CDS |
| GTATATCAATGTTCAGTCTT+CGG | 0.430453 | tig0014543:+724866 | None:intergenic |
| CCATTGACCCAAATAGTTCA+TGG | 0.431227 | tig0014543:-724520 | Msa1355110:CDS |
| AAGTAGAGATGAATACTATA+TGG | 0.431841 | tig0014543:-724254 | Msa1355110:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | tig0014543:+723108 | None:intergenic |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | tig0014543:+722864 | None:intergenic |
| AGGACAACGGGTAGGCGAAA+TGG | 0.436703 | tig0014543:-722724 | Msa1355110:CDS |
| ACTTGTCTAAAACTACCTAT+AGG | 0.437083 | tig0014543:-723350 | Msa1355110:CDS |
| GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | tig0014543:+723437 | None:intergenic |
| GATATCCATCCTAGTCACTA+TGG | 0.449002 | tig0014543:-724433 | Msa1355110:CDS |
| ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | tig0014543:+723205 | None:intergenic |
| AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | tig0014543:-724493 | Msa1355110:CDS |
| ACTCGGCCCCTACCACCTAT+AGG | 0.455800 | tig0014543:+723335 | None:intergenic |
| AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | tig0014543:-722706 | Msa1355110:CDS |
| GCTCGTAATAATCTATCTTC+CGG | 0.462719 | tig0014543:+723407 | None:intergenic |
| GGTAGGCGAAATGGAGGTTT+GGG | 0.465784 | tig0014543:-722715 | Msa1355110:CDS |
| GGGTAGGCGAAATGGAGGTT+TGG | 0.465926 | tig0014543:-722716 | Msa1355110:CDS |
| GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | tig0014543:-723450 | Msa1355110:CDS |
| GATCTAAAACTTGAGATAAT+GGG | 0.468332 | tig0014543:+724551 | None:intergenic |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | tig0014543:-722900 | Msa1355110:CDS |
| ATTACAAGATCAATTTGGAT+TGG | 0.471878 | tig0014543:-724707 | Msa1355110:CDS |
| CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | tig0014543:+722912 | None:intergenic |
| AAGAATTTCTAACTATTGCA+TGG | 0.481440 | tig0014543:-724159 | Msa1355110:CDS |
| GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | tig0014543:-722736 | Msa1355110:CDS |
| CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | tig0014543:+723935 | None:intergenic |
| CGTTTAGAAAATATAATTCG+AGG | 0.485783 | tig0014543:-724676 | Msa1355110:CDS |
| AATTGTGATTCTGGGATCTT+GGG | 0.486220 | tig0014543:-723495 | Msa1355110:CDS |
| ATTGGAATGAAATTTGGAAT+GGG | 0.491267 | tig0014543:-724787 | Msa1355110:CDS |
| TGTTCATATCTCTCATCAAA+AGG | 0.491842 | tig0014543:+723011 | None:intergenic |
| TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | tig0014543:-724355 | Msa1355110:CDS |
| GATTGGAATGAAATTTGGAA+TGG | 0.498930 | tig0014543:-724788 | Msa1355110:CDS |
| CAAGTTGATGATAAAATACA+TGG | 0.502523 | tig0014543:-722810 | Msa1355110:CDS |
| GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | tig0014543:-723987 | Msa1355110:CDS |
| TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | tig0014543:-722704 | Msa1355110:CDS |
| CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | tig0014543:+723960 | None:intergenic |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | tig0014543:-723657 | Msa1355110:CDS |
| AGAACTACGATCTTTGGCTC+TGG | 0.513829 | tig0014543:-722535 | Msa1355110:CDS |
| GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | tig0014543:+724475 | None:intergenic |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | tig0014543:-723155 | Msa1355110:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | tig0014543:-723703 | Msa1355110:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | tig0014543:-722944 | Msa1355110:CDS |
| CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | tig0014543:-723239 | Msa1355110:CDS |
| ATATAGTATTCATCTCTACT+TGG | 0.523407 | tig0014543:+724256 | None:intergenic |
| AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | tig0014543:-723224 | Msa1355110:CDS |
| AAAACTACCTATAGGTGGTA+GGG | 0.530153 | tig0014543:-723342 | Msa1355110:CDS |
| GCATTTACCTTTATGAACCT+GGG | 0.530323 | tig0014543:+723796 | None:intergenic |
| AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | tig0014543:+722573 | None:intergenic |
| GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | tig0014543:-723752 | Msa1355110:CDS |
| GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | tig0014543:-723215 | Msa1355110:CDS |
| AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | tig0014543:-722488 | Msa1355110:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | tig0014543:+723128 | None:intergenic |
| CACAACAACCCCTTAAAGGA+AGG | 0.535519 | tig0014543:-722758 | Msa1355110:CDS |
| AATTCTTGACGGTATCGAGC+TGG | 0.536702 | tig0014543:+724175 | None:intergenic |
| TAAAACTACCTATAGGTGGT+AGG | 0.538804 | tig0014543:-723343 | Msa1355110:CDS |
| CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | tig0014543:+724164 | None:intergenic |
| TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | tig0014543:+723415 | None:intergenic |
| TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | tig0014543:+723418 | None:intergenic |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | tig0014543:+722927 | None:intergenic |
| TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | tig0014543:+723934 | None:intergenic |
| AGAATTTCTAACTATTGCAT+GGG | 0.549733 | tig0014543:-724158 | Msa1355110:CDS |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | tig0014543:-723074 | Msa1355110:CDS |
| TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | tig0014543:+723570 | None:intergenic |
| GAATACTATATGGTAGCGAC+GGG | 0.553560 | tig0014543:-724244 | Msa1355110:CDS |
| GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | tig0014543:-723749 | Msa1355110:CDS |
| CATTGACCCAAATAGTTCAT+GGG | 0.556065 | tig0014543:-724519 | Msa1355110:CDS |
| GATTATTACGAGCTATACTT+GGG | 0.558504 | tig0014543:-723397 | Msa1355110:CDS |
| GCCGAGTTATTGATGTGAGA+TGG | 0.559021 | tig0014543:-723319 | Msa1355110:CDS |
| CTCGGAACTACGATTATTGG+AGG | 0.559077 | tig0014543:-722609 | Msa1355110:CDS |
| ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | tig0014543:+724720 | None:intergenic |
| AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | tig0014543:-722484 | Msa1355110:CDS |
| GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | tig0014543:+724619 | None:intergenic |
| GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | tig0014543:+722499 | None:intergenic |
| AACAAGTGCATAATGTCCAC+TGG | 0.566338 | tig0014543:+722782 | None:intergenic |
| TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | tig0014543:+722750 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | tig0014543:-723064 | Msa1355110:CDS |
| GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | tig0014543:-723426 | Msa1355110:CDS |
| TGAATACTATATGGTAGCGA+CGG | 0.571395 | tig0014543:-724245 | Msa1355110:CDS |
| TCCTACATTGATTCCTTCCG+AGG | 0.572209 | tig0014543:+724390 | None:intergenic |
| CAAATGCGTCCATAGTGACT+AGG | 0.573493 | tig0014543:+724424 | None:intergenic |
| CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | tig0014543:-722747 | Msa1355110:CDS |
| AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | tig0014543:-723228 | Msa1355110:CDS |
| ATATTTGAACCCGAGTATCC+GGG | 0.581389 | tig0014543:-722921 | Msa1355110:CDS |
| CAGACTCATGTGACAAGCCA+TGG | 0.581560 | tig0014543:-723587 | Msa1355110:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | tig0014543:+723094 | None:intergenic |
| AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | tig0014543:+723539 | None:intergenic |
| CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | tig0014543:-722912 | Msa1355110:CDS |
| TGTCCAATTGACACCTCGGA+AGG | 0.584582 | tig0014543:-724403 | Msa1355110:CDS |
| ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | tig0014543:+724081 | None:intergenic |
| TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | tig0014543:-723484 | Msa1355110:CDS |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | tig0014543:+723686 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | tig0014543:-723702 | Msa1355110:CDS |
| AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | tig0014543:-723223 | Msa1355110:CDS |
| GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | tig0014543:-722737 | Msa1355110:CDS |
| TCCATCTCACATCAATAACT+CGG | 0.602104 | tig0014543:+723318 | None:intergenic |
| CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | tig0014543:-724346 | Msa1355110:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | tig0014543:-723698 | Msa1355110:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | tig0014543:+723095 | None:intergenic |
| GATCCTTGGCAATTCACGCA+AGG | 0.614349 | tig0014543:-724360 | Msa1355110:CDS |
| AAAATACATGGACGTTCCAG+TGG | 0.614997 | tig0014543:-722798 | Msa1355110:CDS |
| AACTGGATTGGAACGCCAAG+TGG | 0.615266 | tig0014543:-723975 | Msa1355110:CDS |
| GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | tig0014543:+724613 | None:intergenic |
| AAACTACCTATAGGTGGTAG+GGG | 0.618823 | tig0014543:-723341 | Msa1355110:CDS |
| TGATGAGAGATATGAACAGG+AGG | 0.620223 | tig0014543:-723006 | Msa1355110:CDS |
| AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | tig0014543:+724357 | None:intergenic |
| CATTTGTCCAATTGACACCT+CGG | 0.622149 | tig0014543:-724407 | Msa1355110:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | tig0014543:-723098 | Msa1355110:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | tig0014543:+723127 | None:intergenic |
| TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | tig0014543:+724428 | None:intergenic |
| AAACAAGGAGGACAACGGGT+AGG | 0.626804 | tig0014543:-722732 | Msa1355110:CDS |
| ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | tig0014543:-724345 | Msa1355110:CDS |
| TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | tig0014543:-724490 | Msa1355110:CDS |
| TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | tig0014543:-724480 | Msa1355110:CDS |
| GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | tig0014543:-723483 | Msa1355110:CDS |
| ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | tig0014543:-722757 | Msa1355110:CDS |
| ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | tig0014543:-724391 | Msa1355110:CDS |
| AGGAACAATACCTAAACCTG+TGG | 0.656849 | tig0014543:-722589 | Msa1355110:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | tig0014543:-722627 | Msa1355110:CDS |
| ACAACGGGTAGGCGAAATGG+AGG | 0.659407 | tig0014543:-722721 | Msa1355110:CDS |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | tig0014543:-723120 | Msa1355110:CDS |
| GATTCAGGTATCGACCTCAA+AGG | 0.672007 | tig0014543:-723375 | Msa1355110:CDS |
| TGTCTAAAACTACCTATAGG+TGG | 0.673297 | tig0014543:-723347 | Msa1355110:CDS |
| CCCGCTATAGCCGAACACGC+AGG | 0.684746 | tig0014543:-723935 | Msa1355110:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | tig0014543:-722890 | Msa1355110:CDS |
| GCGAGATATATTGACAGCTG+CGG | 0.702124 | tig0014543:-724818 | Msa1355110:CDS |
| GCAGCTGTCAATATATCTCG+CGG | 0.702925 | tig0014543:+724820 | None:intergenic |
| AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | tig0014543:-722744 | Msa1355110:CDS |
| ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | tig0014543:-724209 | Msa1355110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATTTCAAGATATA+AGG | + | tig0014543:724516-724535 | None:intergenic | 15.0% |
| !! | TGAATTAATTTCAAGATATA+AGG | + | tig0014543:724516-724535 | None:intergenic | 15.0% |
| !! | TAACAAAAATGTATTGTTCT+CGG | + | tig0014543:722507-722526 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | - | tig0014543:723460-723479 | Msa1355110:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | - | tig0014543:723461-723480 | Msa1355110:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | + | tig0014543:723787-723806 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | + | tig0014543:723834-723853 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | + | tig0014543:724084-724103 | None:intergenic | 20.0% |
| !! | TAACAAAAATGTATTGTTCT+CGG | + | tig0014543:722507-722526 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | - | tig0014543:723460-723479 | Msa1355110:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | - | tig0014543:723461-723480 | Msa1355110:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | + | tig0014543:723787-723806 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | + | tig0014543:723834-723853 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | + | tig0014543:724084-724103 | None:intergenic | 20.0% |
| ! | AACAAAAATGTATTGTTCTC+GGG | + | tig0014543:722506-722525 | None:intergenic | 25.0% |
| ! | CATTTGATTGGAATGAAATT+TGG | - | tig0014543:722554-722573 | Msa1355110:CDS | 25.0% |
| !! | ATTGGAATGAAATTTGGAAT+GGG | - | tig0014543:722560-722579 | Msa1355110:CDS | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | - | tig0014543:722635-722654 | Msa1355110:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | - | tig0014543:722640-722659 | Msa1355110:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | - | tig0014543:722671-722690 | Msa1355110:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | + | tig0014543:722799-722818 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | + | tig0014543:723040-723059 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | + | tig0014543:723094-723113 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | - | tig0014543:723093-723112 | Msa1355110:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | + | tig0014543:723186-723205 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | - | tig0014543:723188-723207 | Msa1355110:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | - | tig0014543:723189-723208 | Msa1355110:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | + | tig0014543:723241-723260 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | + | tig0014543:723242-723261 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | + | tig0014543:723246-723265 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | - | tig0014543:723454-723473 | Msa1355110:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | + | tig0014543:723502-723521 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | - | tig0014543:723561-723580 | Msa1355110:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | - | tig0014543:723562-723581 | Msa1355110:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | - | tig0014543:723844-723863 | Msa1355110:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | - | tig0014543:724119-724138 | Msa1355110:CDS | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | + | tig0014543:724498-724517 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | - | tig0014543:724537-724556 | Msa1355110:CDS | 25.0% |
| ! | AACAAAAATGTATTGTTCTC+GGG | + | tig0014543:722506-722525 | None:intergenic | 25.0% |
| ! | CATTTGATTGGAATGAAATT+TGG | - | tig0014543:722554-722573 | Msa1355110:CDS | 25.0% |
| !! | ATTGGAATGAAATTTGGAAT+GGG | - | tig0014543:722560-722579 | Msa1355110:CDS | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | - | tig0014543:722635-722654 | Msa1355110:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | - | tig0014543:722640-722659 | Msa1355110:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | - | tig0014543:722671-722690 | Msa1355110:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | + | tig0014543:722799-722818 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | + | tig0014543:723040-723059 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | + | tig0014543:723094-723113 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | - | tig0014543:723093-723112 | Msa1355110:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | + | tig0014543:723186-723205 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | - | tig0014543:723188-723207 | Msa1355110:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | - | tig0014543:723189-723208 | Msa1355110:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | + | tig0014543:723241-723260 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | + | tig0014543:723242-723261 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | + | tig0014543:723246-723265 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | - | tig0014543:723454-723473 | Msa1355110:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | + | tig0014543:723502-723521 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | - | tig0014543:723561-723580 | Msa1355110:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | - | tig0014543:723562-723581 | Msa1355110:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | - | tig0014543:723844-723863 | Msa1355110:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | - | tig0014543:724119-724138 | Msa1355110:CDS | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | + | tig0014543:724498-724517 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | - | tig0014543:724537-724556 | Msa1355110:CDS | 25.0% |
| GTATATCAATGTTCAGTCTT+CGG | + | tig0014543:722484-722503 | None:intergenic | 30.0% | |
| GATTGGAATGAAATTTGGAA+TGG | - | tig0014543:722559-722578 | Msa1355110:CDS | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | + | tig0014543:722630-722649 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | - | tig0014543:722683-722702 | Msa1355110:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | + | tig0014543:722761-722780 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | - | tig0014543:722767-722786 | Msa1355110:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | + | tig0014543:722771-722790 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | + | tig0014543:722800-722819 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | + | tig0014543:722837-722856 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | + | tig0014543:722838-722857 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | - | tig0014543:722847-722866 | Msa1355110:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | - | tig0014543:722848-722867 | Msa1355110:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | - | tig0014543:723127-723146 | Msa1355110:CDS | 30.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | - | tig0014543:723238-723257 | Msa1355110:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | + | tig0014543:723524-723543 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | - | tig0014543:723644-723663 | Msa1355110:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | - | tig0014543:723645-723664 | Msa1355110:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | + | tig0014543:723824-723843 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | + | tig0014543:723825-723844 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | - | tig0014543:723829-723848 | Msa1355110:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | - | tig0014543:723843-723862 | Msa1355110:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | - | tig0014543:723949-723968 | Msa1355110:CDS | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | - | tig0014543:723950-723969 | Msa1355110:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | + | tig0014543:723989-724008 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | - | tig0014543:723997-724016 | Msa1355110:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | - | tig0014543:724108-724127 | Msa1355110:CDS | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | - | tig0014543:724170-724189 | Msa1355110:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | - | tig0014543:724260-724279 | Msa1355110:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | + | tig0014543:724339-724358 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | - | tig0014543:724338-724357 | Msa1355110:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | + | tig0014543:724370-724389 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | - | tig0014543:724457-724476 | Msa1355110:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | + | tig0014543:724486-724505 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | - | tig0014543:724486-724505 | Msa1355110:CDS | 30.0% | |
| GTATATCAATGTTCAGTCTT+CGG | + | tig0014543:722484-722503 | None:intergenic | 30.0% | |
| GATTGGAATGAAATTTGGAA+TGG | - | tig0014543:722559-722578 | Msa1355110:CDS | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | + | tig0014543:722630-722649 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | - | tig0014543:722683-722702 | Msa1355110:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | + | tig0014543:722761-722780 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | - | tig0014543:722767-722786 | Msa1355110:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | + | tig0014543:722771-722790 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | + | tig0014543:722800-722819 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | + | tig0014543:722837-722856 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | + | tig0014543:722838-722857 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | - | tig0014543:722847-722866 | Msa1355110:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | - | tig0014543:722848-722867 | Msa1355110:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | - | tig0014543:723127-723146 | Msa1355110:CDS | 30.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | - | tig0014543:723238-723257 | Msa1355110:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | + | tig0014543:723524-723543 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | - | tig0014543:723644-723663 | Msa1355110:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | - | tig0014543:723645-723664 | Msa1355110:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | + | tig0014543:723824-723843 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | + | tig0014543:723825-723844 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | - | tig0014543:723829-723848 | Msa1355110:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | - | tig0014543:723843-723862 | Msa1355110:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | - | tig0014543:723949-723968 | Msa1355110:CDS | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | - | tig0014543:723950-723969 | Msa1355110:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | + | tig0014543:723989-724008 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | - | tig0014543:723997-724016 | Msa1355110:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | - | tig0014543:724108-724127 | Msa1355110:CDS | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | - | tig0014543:724170-724189 | Msa1355110:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | - | tig0014543:724260-724279 | Msa1355110:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | + | tig0014543:724339-724358 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | - | tig0014543:724338-724357 | Msa1355110:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | + | tig0014543:724370-724389 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | - | tig0014543:724457-724476 | Msa1355110:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | + | tig0014543:724486-724505 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | - | tig0014543:724486-724505 | Msa1355110:CDS | 30.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | + | tig0014543:722737-722756 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | + | tig0014543:722825-722844 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | - | tig0014543:722828-722847 | Msa1355110:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | - | tig0014543:722854-722873 | Msa1355110:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | - | tig0014543:722965-722984 | Msa1355110:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | - | tig0014543:723102-723121 | Msa1355110:CDS | 35.0% |
| ATGCTCGATAAAAGGAATCA+GGG | + | tig0014543:723269-723288 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | + | tig0014543:723270-723289 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | + | tig0014543:723277-723296 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | + | tig0014543:723356-723375 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | - | tig0014543:723544-723563 | Msa1355110:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | + | tig0014543:723554-723573 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | - | tig0014543:723580-723599 | Msa1355110:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | - | tig0014543:723852-723871 | Msa1355110:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | - | tig0014543:723876-723895 | Msa1355110:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | - | tig0014543:723877-723896 | Msa1355110:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | + | tig0014543:723943-723962 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | - | tig0014543:724000-724019 | Msa1355110:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | - | tig0014543:724004-724023 | Msa1355110:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | - | tig0014543:724005-724024 | Msa1355110:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | + | tig0014543:724032-724051 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | - | tig0014543:724045-724064 | Msa1355110:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | + | tig0014543:724056-724075 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | tig0014543:724192-724211 | Msa1355110:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | - | tig0014543:724226-724245 | Msa1355110:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | - | tig0014543:724273-724292 | Msa1355110:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | + | tig0014543:724403-724422 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | - | tig0014543:724403-724422 | Msa1355110:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | - | tig0014543:724456-724475 | Msa1355110:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | - | tig0014543:724859-724878 | Msa1355110:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | + | tig0014543:724872-724891 | None:intergenic | 35.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | + | tig0014543:722737-722756 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | + | tig0014543:722825-722844 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | - | tig0014543:722828-722847 | Msa1355110:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | - | tig0014543:722854-722873 | Msa1355110:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | - | tig0014543:722965-722984 | Msa1355110:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | - | tig0014543:723102-723121 | Msa1355110:CDS | 35.0% |
| ATGCTCGATAAAAGGAATCA+GGG | + | tig0014543:723269-723288 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | + | tig0014543:723270-723289 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | + | tig0014543:723277-723296 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | + | tig0014543:723356-723375 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | - | tig0014543:723544-723563 | Msa1355110:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | + | tig0014543:723554-723573 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | - | tig0014543:723580-723599 | Msa1355110:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | - | tig0014543:723852-723871 | Msa1355110:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | - | tig0014543:723876-723895 | Msa1355110:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | - | tig0014543:723877-723896 | Msa1355110:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | + | tig0014543:723943-723962 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | - | tig0014543:724000-724019 | Msa1355110:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | - | tig0014543:724004-724023 | Msa1355110:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | - | tig0014543:724005-724024 | Msa1355110:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | + | tig0014543:724032-724051 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | - | tig0014543:724045-724064 | Msa1355110:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | + | tig0014543:724056-724075 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | tig0014543:724192-724211 | Msa1355110:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | - | tig0014543:724226-724245 | Msa1355110:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | - | tig0014543:724273-724292 | Msa1355110:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | + | tig0014543:724403-724422 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | - | tig0014543:724403-724422 | Msa1355110:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | - | tig0014543:724456-724475 | Msa1355110:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | - | tig0014543:724859-724878 | Msa1355110:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | + | tig0014543:724872-724891 | None:intergenic | 35.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | + | tig0014543:722731-722750 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | + | tig0014543:722830-722849 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | - | tig0014543:722827-722846 | Msa1355110:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | - | tig0014543:722891-722910 | Msa1355110:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | - | tig0014543:722892-722911 | Msa1355110:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | - | tig0014543:722914-722933 | Msa1355110:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | - | tig0014543:722940-722959 | Msa1355110:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | - | tig0014543:722973-722992 | Msa1355110:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | - | tig0014543:723103-723122 | Msa1355110:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | - | tig0014543:723195-723214 | Msa1355110:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | - | tig0014543:723355-723374 | Msa1355110:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | - | tig0014543:723534-723553 | Msa1355110:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | + | tig0014543:723555-723574 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | + | tig0014543:723664-723683 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | - | tig0014543:723690-723709 | Msa1355110:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | + | tig0014543:723780-723799 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | + | tig0014543:723811-723830 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | - | tig0014543:723851-723870 | Msa1355110:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | - | tig0014543:723897-723916 | Msa1355110:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | + | tig0014543:723935-723954 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | - | tig0014543:724006-724025 | Msa1355110:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | - | tig0014543:724123-724142 | Msa1355110:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | + | tig0014543:724145-724164 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | + | tig0014543:724201-724220 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | + | tig0014543:724223-724242 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | - | tig0014543:724225-724244 | Msa1355110:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | tig0014543:724227-724246 | Msa1355110:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | + | tig0014543:724255-724274 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | - | tig0014543:724283-724302 | Msa1355110:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | - | tig0014543:724341-724360 | Msa1355110:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | + | tig0014543:724423-724442 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | - | tig0014543:724425-724444 | Msa1355110:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | - | tig0014543:724426-724445 | Msa1355110:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | + | tig0014543:724447-724466 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | - | tig0014543:724447-724466 | Msa1355110:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | - | tig0014543:724549-724568 | Msa1355110:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | + | tig0014543:724568-724587 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | - | tig0014543:724585-724604 | Msa1355110:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | - | tig0014543:724590-724609 | Msa1355110:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | + | tig0014543:724601-724620 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | - | tig0014543:724720-724739 | Msa1355110:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | - | tig0014543:724735-724754 | Msa1355110:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | - | tig0014543:724758-724777 | Msa1355110:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | + | tig0014543:724789-724808 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | + | tig0014543:724851-724870 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | - | tig0014543:724863-724882 | Msa1355110:CDS | 40.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | + | tig0014543:722731-722750 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | + | tig0014543:722830-722849 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | - | tig0014543:722827-722846 | Msa1355110:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | - | tig0014543:722891-722910 | Msa1355110:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | - | tig0014543:722892-722911 | Msa1355110:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | - | tig0014543:722914-722933 | Msa1355110:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | - | tig0014543:722940-722959 | Msa1355110:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | - | tig0014543:722973-722992 | Msa1355110:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | - | tig0014543:723103-723122 | Msa1355110:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | - | tig0014543:723195-723214 | Msa1355110:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | - | tig0014543:723355-723374 | Msa1355110:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | - | tig0014543:723534-723553 | Msa1355110:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | + | tig0014543:723555-723574 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | + | tig0014543:723664-723683 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | - | tig0014543:723690-723709 | Msa1355110:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | + | tig0014543:723780-723799 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | + | tig0014543:723811-723830 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | - | tig0014543:723851-723870 | Msa1355110:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | - | tig0014543:723897-723916 | Msa1355110:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | + | tig0014543:723935-723954 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | - | tig0014543:724006-724025 | Msa1355110:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | - | tig0014543:724123-724142 | Msa1355110:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | + | tig0014543:724145-724164 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | + | tig0014543:724201-724220 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | + | tig0014543:724223-724242 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | - | tig0014543:724225-724244 | Msa1355110:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | tig0014543:724227-724246 | Msa1355110:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | + | tig0014543:724255-724274 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | - | tig0014543:724283-724302 | Msa1355110:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | - | tig0014543:724341-724360 | Msa1355110:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | + | tig0014543:724423-724442 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | - | tig0014543:724425-724444 | Msa1355110:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | - | tig0014543:724426-724445 | Msa1355110:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | + | tig0014543:724447-724466 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | - | tig0014543:724447-724466 | Msa1355110:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | - | tig0014543:724549-724568 | Msa1355110:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | + | tig0014543:724568-724587 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | - | tig0014543:724585-724604 | Msa1355110:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | - | tig0014543:724590-724609 | Msa1355110:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | + | tig0014543:724601-724620 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | - | tig0014543:724720-724739 | Msa1355110:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | - | tig0014543:724735-724754 | Msa1355110:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | - | tig0014543:724758-724777 | Msa1355110:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | + | tig0014543:724789-724808 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | + | tig0014543:724851-724870 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | - | tig0014543:724863-724882 | Msa1355110:CDS | 40.0% | |
| GCAGCTGTCAATATATCTCG+CGG | + | tig0014543:722530-722549 | None:intergenic | 45.0% | |
| GCGAGATATATTGACAGCTG+CGG | - | tig0014543:722529-722548 | Msa1355110:CDS | 45.0% | |
| ACAGCTGCGGATCATTTGAT+TGG | - | tig0014543:722542-722561 | Msa1355110:CDS | 45.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | - | tig0014543:722857-722876 | Msa1355110:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | + | tig0014543:722926-722945 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | + | tig0014543:722950-722969 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | - | tig0014543:722956-722975 | Msa1355110:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | + | tig0014543:722960-722979 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | + | tig0014543:722993-723012 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | - | tig0014543:722992-723011 | Msa1355110:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | - | tig0014543:723135-723154 | Msa1355110:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | - | tig0014543:723138-723157 | Msa1355110:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | + | tig0014543:723175-723194 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | - | tig0014543:723329-723348 | Msa1355110:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | - | tig0014543:723360-723379 | Msa1355110:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | + | tig0014543:723425-723444 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | - | tig0014543:723649-723668 | Msa1355110:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | - | tig0014543:723863-723882 | Msa1355110:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | + | tig0014543:723913-723932 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | - | tig0014543:723921-723940 | Msa1355110:CDS | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | - | tig0014543:723957-723976 | Msa1355110:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | - | tig0014543:723972-723991 | Msa1355110:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | - | tig0014543:724028-724047 | Msa1355110:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | - | tig0014543:724124-724143 | Msa1355110:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | - | tig0014543:724209-724228 | Msa1355110:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | + | tig0014543:724222-724241 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | - | tig0014543:724249-724268 | Msa1355110:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | + | tig0014543:724256-724275 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | - | tig0014543:724282-724301 | Msa1355110:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | - | tig0014543:724589-724608 | Msa1355110:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | + | tig0014543:724600-724619 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | + | tig0014543:724602-724621 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | - | tig0014543:724600-724619 | Msa1355110:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | - | tig0014543:724738-724757 | Msa1355110:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | + | tig0014543:724777-724796 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | - | tig0014543:724806-724825 | Msa1355110:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | - | tig0014543:724812-724831 | Msa1355110:CDS | 45.0% |
| GCAGCTGTCAATATATCTCG+CGG | + | tig0014543:722530-722549 | None:intergenic | 45.0% | |
| GCGAGATATATTGACAGCTG+CGG | - | tig0014543:722529-722548 | Msa1355110:CDS | 45.0% | |
| ACAGCTGCGGATCATTTGAT+TGG | - | tig0014543:722542-722561 | Msa1355110:CDS | 45.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | - | tig0014543:722857-722876 | Msa1355110:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | + | tig0014543:722926-722945 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | + | tig0014543:722950-722969 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | - | tig0014543:722956-722975 | Msa1355110:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | + | tig0014543:722960-722979 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | + | tig0014543:722993-723012 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | - | tig0014543:722992-723011 | Msa1355110:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | - | tig0014543:723135-723154 | Msa1355110:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | - | tig0014543:723138-723157 | Msa1355110:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | + | tig0014543:723175-723194 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | - | tig0014543:723329-723348 | Msa1355110:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | - | tig0014543:723360-723379 | Msa1355110:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | + | tig0014543:723425-723444 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | - | tig0014543:723649-723668 | Msa1355110:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | - | tig0014543:723863-723882 | Msa1355110:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | + | tig0014543:723913-723932 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | - | tig0014543:723921-723940 | Msa1355110:CDS | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | - | tig0014543:723957-723976 | Msa1355110:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | - | tig0014543:723972-723991 | Msa1355110:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | - | tig0014543:724028-724047 | Msa1355110:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | - | tig0014543:724124-724143 | Msa1355110:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | - | tig0014543:724209-724228 | Msa1355110:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | + | tig0014543:724222-724241 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | - | tig0014543:724249-724268 | Msa1355110:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | + | tig0014543:724256-724275 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | - | tig0014543:724282-724301 | Msa1355110:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | - | tig0014543:724589-724608 | Msa1355110:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | + | tig0014543:724600-724619 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | + | tig0014543:724602-724621 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | - | tig0014543:724600-724619 | Msa1355110:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | - | tig0014543:724738-724757 | Msa1355110:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | + | tig0014543:724777-724796 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | - | tig0014543:724806-724825 | Msa1355110:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | - | tig0014543:724812-724831 | Msa1355110:CDS | 45.0% |
| TTTGGGTCCTGGAGGATTGA+CGG | - | tig0014543:722865-722884 | Msa1355110:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | + | tig0014543:722922-722941 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | - | tig0014543:722944-722963 | Msa1355110:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | - | tig0014543:722987-723006 | Msa1355110:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | - | tig0014543:722999-723018 | Msa1355110:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | - | tig0014543:723000-723019 | Msa1355110:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | + | tig0014543:723019-723038 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | + | tig0014543:723343-723362 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | - | tig0014543:723349-723368 | Msa1355110:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | - | tig0014543:723372-723391 | Msa1355110:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | + | tig0014543:723390-723409 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | + | tig0014543:723398-723417 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | - | tig0014543:723760-723779 | Msa1355110:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | - | tig0014543:723862-723881 | Msa1355110:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | - | tig0014543:723864-723883 | Msa1355110:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | + | tig0014543:723932-723951 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | - | tig0014543:724141-724160 | Msa1355110:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | + | tig0014543:724242-724261 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | + | tig0014543:724243-724262 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | - | tig0014543:724603-724622 | Msa1355110:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | - | tig0014543:724615-724634 | Msa1355110:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | - | tig0014543:724632-724651 | Msa1355110:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | + | tig0014543:724771-724790 | None:intergenic | 50.0% |
| TTTGGGTCCTGGAGGATTGA+CGG | - | tig0014543:722865-722884 | Msa1355110:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | + | tig0014543:722922-722941 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | - | tig0014543:722944-722963 | Msa1355110:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | - | tig0014543:722987-723006 | Msa1355110:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | - | tig0014543:722999-723018 | Msa1355110:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | - | tig0014543:723000-723019 | Msa1355110:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | + | tig0014543:723019-723038 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | + | tig0014543:723343-723362 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | - | tig0014543:723349-723368 | Msa1355110:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | - | tig0014543:723372-723391 | Msa1355110:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | + | tig0014543:723390-723409 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | + | tig0014543:723398-723417 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | - | tig0014543:723760-723779 | Msa1355110:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | - | tig0014543:723862-723881 | Msa1355110:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | - | tig0014543:723864-723883 | Msa1355110:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | + | tig0014543:723932-723951 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | - | tig0014543:724141-724160 | Msa1355110:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | + | tig0014543:724242-724261 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | + | tig0014543:724243-724262 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | - | tig0014543:724603-724622 | Msa1355110:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | - | tig0014543:724615-724634 | Msa1355110:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | - | tig0014543:724632-724651 | Msa1355110:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | + | tig0014543:724771-724790 | None:intergenic | 50.0% |
| TTGGGTCCTGGAGGATTGAC+GGG | - | tig0014543:722866-722885 | Msa1355110:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | - | tig0014543:722885-722904 | Msa1355110:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | - | tig0014543:723001-723020 | Msa1355110:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | - | tig0014543:723002-723021 | Msa1355110:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | - | tig0014543:723385-723404 | Msa1355110:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | + | tig0014543:723416-723435 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | - | tig0014543:723595-723614 | Msa1355110:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | - | tig0014543:723598-723617 | Msa1355110:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | - | tig0014543:723612-723631 | Msa1355110:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | - | tig0014543:723613-723632 | Msa1355110:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | - | tig0014543:724132-724151 | Msa1355110:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | + | tig0014543:724439-724458 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | - | tig0014543:724610-724629 | Msa1355110:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | - | tig0014543:724611-724630 | Msa1355110:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | - | tig0014543:724623-724642 | Msa1355110:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | - | tig0014543:724626-724645 | Msa1355110:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | - | tig0014543:724631-724650 | Msa1355110:CDS | 55.0% | |
| TTGGGTCCTGGAGGATTGAC+GGG | - | tig0014543:722866-722885 | Msa1355110:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | - | tig0014543:722885-722904 | Msa1355110:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | - | tig0014543:723001-723020 | Msa1355110:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | - | tig0014543:723002-723021 | Msa1355110:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | - | tig0014543:723385-723404 | Msa1355110:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | + | tig0014543:723416-723435 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | - | tig0014543:723595-723614 | Msa1355110:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | - | tig0014543:723598-723617 | Msa1355110:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | - | tig0014543:723612-723631 | Msa1355110:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | - | tig0014543:723613-723632 | Msa1355110:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | - | tig0014543:724132-724151 | Msa1355110:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | + | tig0014543:724439-724458 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | - | tig0014543:724610-724629 | Msa1355110:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | - | tig0014543:724611-724630 | Msa1355110:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | - | tig0014543:724623-724642 | Msa1355110:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | - | tig0014543:724626-724645 | Msa1355110:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | - | tig0014543:724631-724650 | Msa1355110:CDS | 55.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | - | tig0014543:722867-722886 | Msa1355110:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | + | tig0014543:723415-723434 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | + | tig0014543:724015-724034 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | + | tig0014543:724438-724457 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | - | tig0014543:724435-724454 | Msa1355110:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | - | tig0014543:724641-724660 | Msa1355110:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | - | tig0014543:724642-724661 | Msa1355110:CDS | 60.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | - | tig0014543:722867-722886 | Msa1355110:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | + | tig0014543:723415-723434 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | + | tig0014543:724015-724034 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | + | tig0014543:724438-724457 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | - | tig0014543:724435-724454 | Msa1355110:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | - | tig0014543:724641-724660 | Msa1355110:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | - | tig0014543:724642-724661 | Msa1355110:CDS | 60.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | + | tig0014543:722875-722894 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | - | tig0014543:723412-723431 | Msa1355110:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | - | tig0014543:724643-724662 | Msa1355110:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | - | tig0014543:724648-724667 | Msa1355110:CDS | 65.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | + | tig0014543:722875-722894 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | - | tig0014543:723412-723431 | Msa1355110:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | - | tig0014543:724643-724662 | Msa1355110:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | - | tig0014543:724648-724667 | Msa1355110:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014543 | gene | 722476 | 724893 | 722476 | ID=Msa1355110;Name=Msa1355110 |
| tig0014543 | mRNA | 722476 | 724893 | 722476 | ID=Msa1355110-mRNA-1;Parent=Msa1355110;Name=Msa1355110-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|-1|0|1|-1|1|1|0|805 |
| tig0014543 | exon | 722476 | 724893 | 722476 | ID=Msa1355110-mRNA-1:exon:9288;Parent=Msa1355110-mRNA-1 |
| tig0014543 | CDS | 722476 | 724893 | 722476 | ID=Msa1355110-mRNA-1:cds;Parent=Msa1355110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
