Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139830 | YP_009327948.1 | 100.000 | 884 | 0 | 0 | 1 | 884 | 187 | 1070 | 0.0 | 1826 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139830 | sp|Q9BBS9|RPOB_LOTJA | 92.760 | 884 | 64 | 0 | 1 | 884 | 187 | 1070 | 0.0 | 1711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139830 | A0A1J0I0H8 | 100.000 | 884 | 0 | 0 | 1 | 884 | 187 | 1070 | 0.0 | 1826 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0139770 | Msa0139830 | 0.882400 | 1.075743e-70 | -8.615850e-47 |
| Msa0139790 | Msa0139830 | 0.836971 | 6.844146e-57 | -8.615850e-47 |
| Msa0139800 | Msa0139830 | 0.806272 | 8.917029e-50 | -8.615850e-47 |
| Msa0139830 | Msa0268200 | 0.819684 | 1.020496e-52 | -8.615850e-47 |
| Msa0139830 | Msa0268350 | 0.801533 | 8.608235e-49 | -8.615850e-47 |
| Msa0139830 | Msa0268440 | 0.825610 | 4.267993e-54 | -8.615850e-47 |
| Msa0139830 | Msa0268520 | 0.800703 | 1.272626e-48 | -8.615850e-47 |
| Msa0139830 | Msa0268590 | 0.868937 | 4.504441e-66 | -8.615850e-47 |
| Msa0139830 | Msa0268610 | 0.844240 | 8.546632e-59 | -8.615850e-47 |
| Msa0139830 | Msa0268670 | 0.801481 | 8.824566e-49 | -8.615850e-47 |
| Msa0139830 | Msa0268710 | 0.820885 | 5.414131e-53 | -8.615850e-47 |
| Msa0139830 | Msa0268780 | 0.816683 | 4.872742e-52 | -8.615850e-47 |
| Msa0139830 | Msa0268820 | 0.849744 | 2.656649e-60 | -8.615850e-47 |
| Msa0139830 | Msa0268870 | 0.803364 | 3.611875e-49 | -8.615850e-47 |
| Msa0139830 | Msa0268880 | 0.805267 | 1.449432e-49 | -8.615850e-47 |
| Msa0139830 | Msa0268910 | 0.803221 | 3.865746e-49 | -8.615850e-47 |
| Msa0139830 | Msa0268990 | 0.820526 | 6.548032e-53 | -8.615850e-47 |
| Msa0139830 | Msa0269030 | 0.863360 | 2.632542e-64 | -8.615850e-47 |
| Msa0139830 | Msa0269080 | 0.810884 | 9.232441e-51 | -8.615850e-47 |
| Msa0139830 | Msa0344130 | 0.840958 | 6.352313e-58 | -8.615850e-47 |
| Msa0139830 | Msa0344260 | 0.807122 | 5.897422e-50 | -8.615850e-47 |
| Msa0139830 | Msa0344320 | 0.836533 | 8.852832e-57 | -8.615850e-47 |
| Msa0139830 | Msa0484000 | 0.822997 | 1.755803e-53 | -8.615850e-47 |
| Msa0139830 | Msa0582500 | 0.848125 | 7.479774e-60 | -8.615850e-47 |
| Msa0139830 | Msa0582550 | 0.812304 | 4.535965e-51 | -8.615850e-47 |
| Msa0139830 | Msa0582590 | 0.807297 | 5.413943e-50 | -8.615850e-47 |
| Msa0139830 | Msa0582630 | 0.802123 | 6.512165e-49 | -8.615850e-47 |
| Msa0139830 | Msa0582670 | 0.856308 | 3.513642e-62 | -8.615850e-47 |
| Msa0139830 | Msa0582680 | 0.846538 | 2.039829e-59 | -8.615850e-47 |
| Msa0139830 | Msa0582790 | 0.847204 | 1.340591e-59 | -8.615850e-47 |
| Msa0139830 | Msa0582800 | 0.830650 | 2.606327e-55 | -8.615850e-47 |
| Msa0139830 | Msa0582880 | 0.806704 | 7.227893e-50 | -8.615850e-47 |
| Msa0139830 | Msa0931060 | 0.870855 | 1.064275e-66 | -8.615850e-47 |
| Msa0139830 | Msa0931110 | 0.801680 | 8.032145e-49 | -8.615850e-47 |
| Msa0139830 | Msa0931120 | 0.829810 | 4.179619e-55 | -8.615850e-47 |
| Msa0139830 | Msa0931170 | 0.801971 | 6.999722e-49 | -8.615850e-47 |
| Msa0139830 | Msa0931180 | 0.802572 | 5.263568e-49 | -8.615850e-47 |
| Msa0139830 | Msa0931230 | 0.808792 | 2.602203e-50 | -8.615850e-47 |
| Msa0139830 | Msa0931250 | 0.820187 | 7.831607e-53 | -8.615850e-47 |
| Msa0139830 | Msa0983680 | 0.803662 | 3.132665e-49 | -8.615850e-47 |
| Msa0139830 | Msa0983690 | 0.807784 | 4.269008e-50 | -8.615850e-47 |
| Msa0139830 | Msa1086030 | 0.811555 | 6.604320e-51 | -8.615850e-47 |
| Msa0139830 | Msa1086040 | 0.814683 | 1.359963e-51 | -8.615850e-47 |
| Msa0139830 | Msa1086070 | 0.802616 | 5.155542e-49 | -8.615850e-47 |
| Msa0139830 | Msa1086110 | 0.877760 | 4.852737e-69 | -8.615850e-47 |
| Msa0139830 | Msa1086130 | 0.908458 | 1.672326e-81 | -8.615850e-47 |
| Msa0139830 | Msa1086220 | 0.886323 | 3.781254e-72 | -8.615850e-47 |
| Msa0139830 | Msa1086240 | 0.809925 | 1.487049e-50 | -8.615850e-47 |
| Msa0139830 | Msa1086320 | 0.806798 | 6.905755e-50 | -8.615850e-47 |
| Msa0139830 | Msa1086350 | 0.807631 | 4.599199e-50 | -8.615850e-47 |
| Msa0139830 | Msa1086420 | 0.803898 | 2.797544e-49 | -8.615850e-47 |
| Msa0139830 | Msa1086450 | 0.807095 | 5.974271e-50 | -8.615850e-47 |
| Msa0139830 | Msa1086500 | 0.812889 | 3.378301e-51 | -8.615850e-47 |
| Msa0139830 | Msa1086650 | 0.810253 | 1.263508e-50 | -8.615850e-47 |
| Msa0139830 | Msa1086880 | 0.801708 | 7.925788e-49 | -8.615850e-47 |
| Msa0139830 | Msa1086900 | 0.808832 | 2.551087e-50 | -8.615850e-47 |
| Msa0139830 | Msa1086930 | 0.839318 | 1.702085e-57 | -8.615850e-47 |
| Msa0139830 | Msa1143110 | 0.842477 | 2.525588e-58 | -8.615850e-47 |
| Msa0139830 | Msa1143170 | 0.800077 | 1.706639e-48 | -8.615850e-47 |
| Msa0139830 | Msa1143190 | 0.835235 | 1.887976e-56 | -8.615850e-47 |
| Msa0139830 | Msa1305100 | 0.850985 | 1.191618e-60 | -8.615850e-47 |
| Msa0139830 | Msa1305110 | 0.820692 | 5.996296e-53 | -8.615850e-47 |
| Msa0139830 | Msa1305150 | 0.887186 | 1.779888e-72 | -8.615850e-47 |
| Msa0139830 | Msa1354860 | 0.820909 | 5.344758e-53 | -8.615850e-47 |
| Msa0139830 | Msa1354940 | 0.857903 | 1.188445e-62 | -8.615850e-47 |
| Msa0139830 | Msa1355110 | 0.884912 | 1.277688e-71 | -8.615850e-47 |
| Msa0139830 | Msa1380550 | 0.801176 | 1.018768e-48 | -8.615850e-47 |
| Msa0139830 | Msa1380560 | 0.810667 | 1.028493e-50 | -8.615850e-47 |
| Msa0139830 | Msa1380630 | 0.886938 | 2.210614e-72 | -8.615850e-47 |
| Msa0139830 | Msa1380670 | 0.853121 | 2.946019e-61 | -8.615850e-47 |
| Msa0139830 | Msa1380690 | 0.806865 | 6.684350e-50 | -8.615850e-47 |
| Msa0139830 | Msa1380700 | 0.854876 | 9.191763e-62 | -8.615850e-47 |
| Msa0139830 | Msa1394070 | 0.827350 | 1.642353e-54 | -8.615850e-47 |
| Msa0139830 | Msa1394120 | 0.803108 | 4.079554e-49 | -8.615850e-47 |
| Msa0139830 | Msa1394220 | 0.807610 | 4.646100e-50 | -8.615850e-47 |
| Msa0139830 | Msa1394260 | 0.814331 | 1.626524e-51 | -8.615850e-47 |
| Msa0139830 | Msa1394270 | 0.801339 | 9.434360e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139830 | MtrunA17_Chr4g0016641 | 99.321 | 884 | 6 | 0 | 1 | 884 | 192 | 1075 | 0.0 | 1810 |
| Msa0139830 | MtrunA17_CPg0493041 | 99.321 | 884 | 6 | 0 | 1 | 884 | 192 | 1075 | 0.0 | 1810 |
| Msa0139830 | MtrunA17_Chr4g0015531 | 78.804 | 368 | 4 | 3 | 110 | 477 | 1 | 294 | 0.0 | 562 |
| Msa0139830 | MtrunA17_Chr1g0159041 | 66.279 | 430 | 37 | 3 | 280 | 709 | 1 | 322 | 0.0 | 537 |
| Msa0139830 | MtrunA17_Chr4g0015541 | 87.619 | 210 | 2 | 1 | 675 | 884 | 1 | 186 | 2.08e-119 | 365 |
| Msa0139830 | MtrunA17_Chr1g0159051 | 94.286 | 105 | 6 | 0 | 83 | 187 | 12 | 116 | 9.73e-63 | 207 |
| Msa0139830 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 434 | 511 | 1 | 78 | 1.11e-46 | 160 |
| Msa0139830 | MtrunA17_Chr8g0345421 | 28.673 | 422 | 257 | 9 | 462 | 865 | 728 | 1123 | 1.26e-36 | 149 |
| Msa0139830 | MtrunA17_Chr1g0155911 | 26.829 | 369 | 235 | 6 | 462 | 825 | 782 | 1120 | 2.94e-35 | 145 |
| Msa0139830 | MtrunA17_Chr3g0136911 | 25.147 | 509 | 293 | 17 | 396 | 867 | 724 | 1181 | 5.59e-28 | 122 |
| Msa0139830 | MtrunA17_Chr8g0375171 | 24.754 | 509 | 295 | 17 | 396 | 867 | 722 | 1179 | 1.50e-27 | 120 |
| Msa0139830 | MtrunA17_Chr4g0069391 | 25.635 | 394 | 251 | 9 | 462 | 850 | 786 | 1142 | 3.84e-27 | 119 |
| Msa0139830 | MtrunA17_Chr3g0142431 | 27.381 | 252 | 146 | 6 | 638 | 867 | 2 | 238 | 6.41e-18 | 84.3 |
| Msa0139830 | MtrunA17_Chr4g0015521 | 96.552 | 29 | 1 | 0 | 1 | 29 | 81 | 109 | 8.39e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139830 | ATCG00190.1 | 89.955 | 886 | 87 | 1 | 1 | 884 | 187 | 1072 | 0.0 | 1666 |
| Msa0139830 | AT4G21710.1 | 26.651 | 424 | 261 | 8 | 462 | 865 | 779 | 1172 | 2.64e-37 | 152 |
| Msa0139830 | AT5G45140.2 | 27.553 | 421 | 262 | 8 | 462 | 863 | 754 | 1150 | 7.94e-35 | 144 |
| Msa0139830 | AT5G45140.1 | 27.553 | 421 | 262 | 8 | 462 | 863 | 754 | 1150 | 7.94e-35 | 144 |
| Msa0139830 | AT1G29940.1 | 27.200 | 375 | 220 | 12 | 466 | 826 | 756 | 1091 | 1.42e-25 | 114 |
| Msa0139830 | AT3G23780.1 | 24.263 | 441 | 253 | 10 | 466 | 868 | 769 | 1166 | 5.29e-25 | 112 |
| Msa0139830 | AT3G23780.2 | 24.263 | 441 | 253 | 10 | 466 | 868 | 769 | 1166 | 5.29e-25 | 112 |
| Msa0139830 | AT3G18090.1 | 24.194 | 434 | 263 | 9 | 466 | 868 | 651 | 1049 | 1.87e-24 | 110 |
| Msa0139830 | AT3G18090.2 | 24.444 | 225 | 137 | 3 | 466 | 685 | 651 | 847 | 4.47e-13 | 73.9 |
| Msa0139830 | AT3G18090.3 | 24.444 | 225 | 137 | 3 | 466 | 685 | 651 | 847 | 6.06e-13 | 73.6 |
Find 204 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | 1_3:-73712329 | Msa0139830:CDS |
| TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | 1_3:+73711354 | None:intergenic |
| CATTTGATTGGAATGAAATT+TGG | 0.153768 | 1_3:-73712622 | Msa0139830:CDS |
| CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | 1_3:+73710577 | None:intergenic |
| GTTACACAACAACCCCTTAA+AGG | 0.212213 | 1_3:-73710591 | Msa0139830:CDS |
| TTTCAACAAAGATGTGAATT+AGG | 0.219138 | 1_3:-73712742 | Msa0139830:CDS |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | 1_3:+73710776 | None:intergenic |
| ATATATATATGAATCGTTTC+TGG | 0.228166 | 1_3:+73711095 | None:intergenic |
| ACATAAAGATTCAGGAAATA+TGG | 0.234879 | 1_3:+73712786 | None:intergenic |
| GTCAAAAGAAAATGCCATTT+TGG | 0.238441 | 1_3:-73712845 | Msa0139830:CDS |
| GAACGTTGATATCTAATTAA+TGG | 0.244746 | 1_3:+73711677 | None:intergenic |
| TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | 1_3:-73710690 | Msa0139830:CDS |
| TGAATTAATTTCAAGATATA+AGG | 0.248171 | 1_3:+73710663 | None:intergenic |
| GGAATCAATGTAGGACTTAT+TGG | 0.263649 | 1_3:-73712211 | Msa0139830:CDS |
| ACGAGCTATACTTGGGATTC+AGG | 0.269809 | 1_3:-73711219 | Msa0139830:CDS |
| AGCACTGAATCGAGGTATTC+AGG | 0.270037 | 1_3:-73712041 | Msa0139830:CDS |
| GATCTATTACAAGATCAATT+TGG | 0.270369 | 1_3:-73712541 | Msa0139830:CDS |
| GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | 1_3:+73712418 | None:intergenic |
| CGATCTAAAACTTGAGATAA+TGG | 0.281648 | 1_3:+73712379 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 1_3:+73710978 | None:intergenic |
| TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | 1_3:+73710578 | None:intergenic |
| ATAATTCGAGGAACTATATC+TGG | 0.305120 | 1_3:-73712493 | Msa0139830:CDS |
| GCATCATTATGCTCGATAAA+AGG | 0.305503 | 1_3:+73711902 | None:intergenic |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 1_3:+73710936 | None:intergenic |
| GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | 1_3:-73712328 | Msa0139830:CDS |
| TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | 1_3:+73710732 | None:intergenic |
| AATTCCGTACATAAAGATTC+AGG | 0.323867 | 1_3:+73712778 | None:intergenic |
| CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | 1_3:-73711791 | Msa0139830:CDS |
| TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | 1_3:-73711564 | Msa0139830:CDS |
| CGCATTTACCTTTATGAACC+TGG | 0.329782 | 1_3:+73711624 | None:intergenic |
| AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | 1_3:+73711754 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | 1_3:-73710720 | Msa0139830:CDS |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | 1_3:-73710916 | Msa0139830:CDS |
| AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | 1_3:+73710307 | None:intergenic |
| TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | 1_3:+73710408 | None:intergenic |
| TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | 1_3:-73712176 | Msa0139830:CDS |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | 1_3:+73710390 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 1_3:-73710950 | Msa0139830:CDS |
| GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | 1_3:-73711847 | Msa0139830:CDS |
| CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | 1_3:-73711314 | Msa0139830:CDS |
| TCAGTCTTCGGTTCATATTT+CGG | 0.349155 | 1_3:+73712707 | None:intergenic |
| CCATGAACTATTTGGGTCAA+TGG | 0.354074 | 1_3:+73712349 | None:intergenic |
| GTACTCGGAACTACGATTAT+TGG | 0.356639 | 1_3:-73710441 | Msa0139830:CDS |
| CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | 1_3:-73711827 | Msa0139830:CDS |
| AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | 1_3:+73711781 | None:intergenic |
| CGTTCGAGAACTACGATCTT+TGG | 0.364953 | 1_3:-73710370 | Msa0139830:CDS |
| TATGCTCGATAAAAGGAATC+AGG | 0.367331 | 1_3:+73711909 | None:intergenic |
| TTGTCGATAAAACTCCAAAA+TGG | 0.374690 | 1_3:+73712831 | None:intergenic |
| TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | 1_3:+73710740 | None:intergenic |
| TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | 1_3:-73712310 | Msa0139830:CDS |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 1_3:-73710894 | Msa0139830:CDS |
| ACAGCTGCGGATCATTTGAT+TGG | 0.389432 | 1_3:-73712634 | Msa0139830:CDS |
| GATATTTGAACCCGAGTATC+CGG | 0.389575 | 1_3:-73710751 | Msa0139830:CDS |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | 1_3:-73710951 | Msa0139830:CDS |
| GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | 1_3:-73710528 | Msa0139830:CDS |
| GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | 1_3:-73711563 | Msa0139830:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 1_3:-73710967 | Msa0139830:CDS |
| ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | 1_3:+73712229 | None:intergenic |
| AGATTATTACGAGCTATACT+TGG | 0.409704 | 1_3:-73711227 | Msa0139830:CDS |
| TGTAGGACTTATTGGATCCT+TGG | 0.411030 | 1_3:-73712203 | Msa0139830:CDS |
| TCTAACTATTGCATGGGAAC+AGG | 0.414074 | 1_3:-73711981 | Msa0139830:CDS |
| GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | 1_3:-73711821 | Msa0139830:CDS |
| TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | 1_3:-73712177 | Msa0139830:CDS |
| TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | 1_3:-73712311 | Msa0139830:CDS |
| GAATTGTGATTCTGGGATCT+TGG | 0.426630 | 1_3:-73711325 | Msa0139830:CDS |
| ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | 1_3:-73710534 | Msa0139830:CDS |
| GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | 1_3:+73711355 | None:intergenic |
| TATGTCTTTCCTCAATGAAA+AGG | 0.429238 | 1_3:-73712884 | Msa0139830:CDS |
| AACTATTTGGGTCAATGGAT+TGG | 0.429624 | 1_3:+73712354 | None:intergenic |
| GCCGGGAGACATGGAAATAA+AGG | 0.429982 | 1_3:-73711035 | Msa0139830:CDS |
| GTATATCAATGTTCAGTCTT+CGG | 0.430453 | 1_3:+73712695 | None:intergenic |
| CCATTGACCCAAATAGTTCA+TGG | 0.431227 | 1_3:-73712349 | Msa0139830:CDS |
| AAGTAGAGATGAATACTATA+TGG | 0.431841 | 1_3:-73712083 | Msa0139830:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 1_3:+73710937 | None:intergenic |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | 1_3:+73710693 | None:intergenic |
| AGGACAACGGGTAGGCGAAA+TGG | 0.436703 | 1_3:-73710553 | Msa0139830:CDS |
| ACTTGTCTAAAACTACCTAT+AGG | 0.437083 | 1_3:-73711179 | Msa0139830:CDS |
| GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | 1_3:+73711266 | None:intergenic |
| CATAAAGATTCAGGAAATAT+GGG | 0.442441 | 1_3:+73712787 | None:intergenic |
| GATATCCATCCTAGTCACTA+TGG | 0.449002 | 1_3:-73712262 | Msa0139830:CDS |
| ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | 1_3:+73711034 | None:intergenic |
| AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | 1_3:-73712322 | Msa0139830:CDS |
| ACTCGGCCCCTACCACCTAT+AGG | 0.455800 | 1_3:+73711164 | None:intergenic |
| AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | 1_3:-73710535 | Msa0139830:CDS |
| GCTCGTAATAATCTATCTTC+CGG | 0.462719 | 1_3:+73711236 | None:intergenic |
| GGTAGGCGAAATGGAGGTTT+GGG | 0.465784 | 1_3:-73710544 | Msa0139830:CDS |
| GGGTAGGCGAAATGGAGGTT+TGG | 0.465926 | 1_3:-73710545 | Msa0139830:CDS |
| GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | 1_3:-73711279 | Msa0139830:CDS |
| GATCTAAAACTTGAGATAAT+GGG | 0.468332 | 1_3:+73712380 | None:intergenic |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | 1_3:-73710729 | Msa0139830:CDS |
| ATTACAAGATCAATTTGGAT+TGG | 0.471878 | 1_3:-73712536 | Msa0139830:CDS |
| CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | 1_3:+73710741 | None:intergenic |
| AAGAATTTCTAACTATTGCA+TGG | 0.481440 | 1_3:-73711988 | Msa0139830:CDS |
| GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | 1_3:-73710565 | Msa0139830:CDS |
| CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | 1_3:+73711764 | None:intergenic |
| CGTTTAGAAAATATAATTCG+AGG | 0.485783 | 1_3:-73712505 | Msa0139830:CDS |
| AATTGTGATTCTGGGATCTT+GGG | 0.486220 | 1_3:-73711324 | Msa0139830:CDS |
| AGATGTGAATTAGGAGGGAT+TGG | 0.486416 | 1_3:-73712733 | Msa0139830:CDS |
| ATTGGAATGAAATTTGGAAT+GGG | 0.491267 | 1_3:-73712616 | Msa0139830:CDS |
| TGTTCATATCTCTCATCAAA+AGG | 0.491842 | 1_3:+73710840 | None:intergenic |
| CAACAAAGATGTGAATTAGG+AGG | 0.492034 | 1_3:-73712739 | Msa0139830:CDS |
| ATTTCCTGAATCTTTATGTA+CGG | 0.495836 | 1_3:-73712782 | Msa0139830:CDS |
| TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | 1_3:-73712184 | Msa0139830:CDS |
| GATTGGAATGAAATTTGGAA+TGG | 0.498930 | 1_3:-73712617 | Msa0139830:CDS |
| CAAGTTGATGATAAAATACA+TGG | 0.502523 | 1_3:-73710639 | Msa0139830:CDS |
| GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | 1_3:-73711816 | Msa0139830:CDS |
| TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | 1_3:-73710533 | Msa0139830:CDS |
| CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | 1_3:+73711789 | None:intergenic |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 1_3:-73711486 | Msa0139830:CDS |
| AACAAAGATGTGAATTAGGA+GGG | 0.512939 | 1_3:-73712738 | Msa0139830:CDS |
| AGAACTACGATCTTTGGCTC+TGG | 0.513829 | 1_3:-73710364 | Msa0139830:CDS |
| GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | 1_3:+73712304 | None:intergenic |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 1_3:-73710984 | Msa0139830:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 1_3:-73711532 | Msa0139830:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | 1_3:-73710773 | Msa0139830:CDS |
| CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | 1_3:-73711068 | Msa0139830:CDS |
| ATATAGTATTCATCTCTACT+TGG | 0.523407 | 1_3:+73712085 | None:intergenic |
| CGACAATTTGCTTGTGTAGG+CGG | 0.527978 | 1_3:-73712814 | Msa0139830:CDS |
| AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | 1_3:-73711053 | Msa0139830:CDS |
| AAAACTACCTATAGGTGGTA+GGG | 0.530153 | 1_3:-73711171 | Msa0139830:CDS |
| GCATTTACCTTTATGAACCT+GGG | 0.530323 | 1_3:+73711625 | None:intergenic |
| AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | 1_3:+73710402 | None:intergenic |
| GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | 1_3:-73711581 | Msa0139830:CDS |
| GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | 1_3:-73711044 | Msa0139830:CDS |
| AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | 1_3:-73710317 | Msa0139830:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 1_3:+73710957 | None:intergenic |
| CACAACAACCCCTTAAAGGA+AGG | 0.535519 | 1_3:-73710587 | Msa0139830:CDS |
| AATTCTTGACGGTATCGAGC+TGG | 0.536702 | 1_3:+73712004 | None:intergenic |
| TAAAACTACCTATAGGTGGT+AGG | 0.538804 | 1_3:-73711172 | Msa0139830:CDS |
| CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | 1_3:+73711993 | None:intergenic |
| TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | 1_3:+73711244 | None:intergenic |
| TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | 1_3:+73711247 | None:intergenic |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | 1_3:+73710756 | None:intergenic |
| TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | 1_3:+73711763 | None:intergenic |
| AGAATTTCTAACTATTGCAT+GGG | 0.549733 | 1_3:-73711987 | Msa0139830:CDS |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | 1_3:-73710903 | Msa0139830:CDS |
| TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | 1_3:+73711399 | None:intergenic |
| GAATACTATATGGTAGCGAC+GGG | 0.553560 | 1_3:-73712073 | Msa0139830:CDS |
| GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | 1_3:-73711578 | Msa0139830:CDS |
| TATCGACAATTTGCTTGTGT+AGG | 0.554239 | 1_3:-73712817 | Msa0139830:CDS |
| CATTGACCCAAATAGTTCAT+GGG | 0.556065 | 1_3:-73712348 | Msa0139830:CDS |
| GATTATTACGAGCTATACTT+GGG | 0.558504 | 1_3:-73711226 | Msa0139830:CDS |
| GCCGAGTTATTGATGTGAGA+TGG | 0.559021 | 1_3:-73711148 | Msa0139830:CDS |
| CTCGGAACTACGATTATTGG+AGG | 0.559077 | 1_3:-73710438 | Msa0139830:CDS |
| ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | 1_3:+73712549 | None:intergenic |
| AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | 1_3:-73710313 | Msa0139830:CDS |
| GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | 1_3:+73712448 | None:intergenic |
| GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | 1_3:+73710328 | None:intergenic |
| AACAAGTGCATAATGTCCAC+TGG | 0.566338 | 1_3:+73710611 | None:intergenic |
| TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | 1_3:+73710579 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 1_3:-73710893 | Msa0139830:CDS |
| GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | 1_3:-73711255 | Msa0139830:CDS |
| TGAATACTATATGGTAGCGA+CGG | 0.571395 | 1_3:-73712074 | Msa0139830:CDS |
| TCCTACATTGATTCCTTCCG+AGG | 0.572209 | 1_3:+73712219 | None:intergenic |
| CAAATGCGTCCATAGTGACT+AGG | 0.573493 | 1_3:+73712253 | None:intergenic |
| CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | 1_3:-73710576 | Msa0139830:CDS |
| AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | 1_3:-73711057 | Msa0139830:CDS |
| ATATTTGAACCCGAGTATCC+GGG | 0.581389 | 1_3:-73710750 | Msa0139830:CDS |
| CAGACTCATGTGACAAGCCA+TGG | 0.581560 | 1_3:-73711416 | Msa0139830:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 1_3:+73710923 | None:intergenic |
| AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | 1_3:+73711368 | None:intergenic |
| CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | 1_3:-73710741 | Msa0139830:CDS |
| TGTCCAATTGACACCTCGGA+AGG | 0.584582 | 1_3:-73712232 | Msa0139830:CDS |
| GTCTTTCCTCAATGAAAAGG+AGG | 0.586724 | 1_3:-73712881 | Msa0139830:CDS |
| ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | 1_3:+73711910 | None:intergenic |
| TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | 1_3:-73711313 | Msa0139830:CDS |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 1_3:+73711515 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 1_3:-73711531 | Msa0139830:CDS |
| AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | 1_3:-73711052 | Msa0139830:CDS |
| GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | 1_3:-73710566 | Msa0139830:CDS |
| TCCATCTCACATCAATAACT+CGG | 0.602104 | 1_3:+73711147 | None:intergenic |
| CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | 1_3:-73712175 | Msa0139830:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 1_3:-73711527 | Msa0139830:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 1_3:+73710924 | None:intergenic |
| GATCCTTGGCAATTCACGCA+AGG | 0.614349 | 1_3:-73712189 | Msa0139830:CDS |
| AAAATACATGGACGTTCCAG+TGG | 0.614997 | 1_3:-73710627 | Msa0139830:CDS |
| AACTGGATTGGAACGCCAAG+TGG | 0.615266 | 1_3:-73711804 | Msa0139830:CDS |
| GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | 1_3:+73712442 | None:intergenic |
| AAACTACCTATAGGTGGTAG+GGG | 0.618823 | 1_3:-73711170 | Msa0139830:CDS |
| TGATGAGAGATATGAACAGG+AGG | 0.620223 | 1_3:-73710835 | Msa0139830:CDS |
| AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | 1_3:+73712186 | None:intergenic |
| CATTTGTCCAATTGACACCT+CGG | 0.622149 | 1_3:-73712236 | Msa0139830:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | 1_3:-73710927 | Msa0139830:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 1_3:+73710956 | None:intergenic |
| TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | 1_3:+73712257 | None:intergenic |
| AAACAAGGAGGACAACGGGT+AGG | 0.626804 | 1_3:-73710561 | Msa0139830:CDS |
| ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | 1_3:-73712174 | Msa0139830:CDS |
| TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | 1_3:-73712319 | Msa0139830:CDS |
| TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | 1_3:-73712309 | Msa0139830:CDS |
| GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | 1_3:-73711312 | Msa0139830:CDS |
| ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | 1_3:-73710586 | Msa0139830:CDS |
| ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | 1_3:-73712220 | Msa0139830:CDS |
| AGGAACAATACCTAAACCTG+TGG | 0.656849 | 1_3:-73710418 | Msa0139830:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | 1_3:-73710456 | Msa0139830:CDS |
| ACAACGGGTAGGCGAAATGG+AGG | 0.659407 | 1_3:-73710550 | Msa0139830:CDS |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 1_3:-73710949 | Msa0139830:CDS |
| GATTCAGGTATCGACCTCAA+AGG | 0.672007 | 1_3:-73711204 | Msa0139830:CDS |
| TGTCTAAAACTACCTATAGG+TGG | 0.673297 | 1_3:-73711176 | Msa0139830:CDS |
| CCCGCTATAGCCGAACACGC+AGG | 0.684746 | 1_3:-73711764 | Msa0139830:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | 1_3:-73710719 | Msa0139830:CDS |
| GCGAGATATATTGACAGCTG+CGG | 0.702124 | 1_3:-73712647 | Msa0139830:CDS |
| GCAGCTGTCAATATATCTCG+CGG | 0.702925 | 1_3:+73712649 | None:intergenic |
| AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | 1_3:-73710573 | Msa0139830:CDS |
| ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | 1_3:-73712038 | Msa0139830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATTTCAAGATATA+AGG | + | chr1_3:73712582-73712601 | None:intergenic | 15.0% |
| !! | AAAAGGAGGAAAAAAAAATA+GGG | - | chr1_3:73710375-73710394 | Msa0139830:CDS | 20.0% |
| !! | TAACAAAAATGTATTGTTCT+CGG | + | chr1_3:73710573-73710592 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | - | chr1_3:73711526-73711545 | Msa0139830:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | - | chr1_3:73711527-73711546 | Msa0139830:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | + | chr1_3:73711853-73711872 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | + | chr1_3:73711900-73711919 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | + | chr1_3:73712150-73712169 | None:intergenic | 20.0% |
| ! | AGGAAAGACATAAAAATTTC+GGG | + | chr1_3:73710350-73710369 | None:intergenic | 25.0% |
| ! | GAGGAAAGACATAAAAATTT+CGG | + | chr1_3:73710351-73710370 | None:intergenic | 25.0% |
| ! | GAAAAGGAGGAAAAAAAAAT+AGG | - | chr1_3:73710374-73710393 | Msa0139830:CDS | 25.0% |
| ! | CATAAAGATTCAGGAAATAT+GGG | + | chr1_3:73710458-73710477 | None:intergenic | 25.0% |
| ! | ACATAAAGATTCAGGAAATA+TGG | + | chr1_3:73710459-73710478 | None:intergenic | 25.0% |
| ! | ATTTCCTGAATCTTTATGTA+CGG | - | chr1_3:73710460-73710479 | Msa0139830:CDS | 25.0% |
| ! | TTTCAACAAAGATGTGAATT+AGG | - | chr1_3:73710500-73710519 | Msa0139830:CDS | 25.0% |
| ! | AACAAAAATGTATTGTTCTC+GGG | + | chr1_3:73710572-73710591 | None:intergenic | 25.0% |
| ! | CATTTGATTGGAATGAAATT+TGG | - | chr1_3:73710620-73710639 | Msa0139830:CDS | 25.0% |
| !! | ATTGGAATGAAATTTGGAAT+GGG | - | chr1_3:73710626-73710645 | Msa0139830:CDS | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | - | chr1_3:73710701-73710720 | Msa0139830:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | - | chr1_3:73710706-73710725 | Msa0139830:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | - | chr1_3:73710737-73710756 | Msa0139830:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | + | chr1_3:73710865-73710884 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | + | chr1_3:73711106-73711125 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | + | chr1_3:73711160-73711179 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | - | chr1_3:73711159-73711178 | Msa0139830:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | + | chr1_3:73711252-73711271 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | - | chr1_3:73711254-73711273 | Msa0139830:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | - | chr1_3:73711255-73711274 | Msa0139830:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | + | chr1_3:73711307-73711326 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | + | chr1_3:73711308-73711327 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | + | chr1_3:73711312-73711331 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | - | chr1_3:73711520-73711539 | Msa0139830:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | + | chr1_3:73711568-73711587 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | - | chr1_3:73711627-73711646 | Msa0139830:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | - | chr1_3:73711628-73711647 | Msa0139830:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | - | chr1_3:73711910-73711929 | Msa0139830:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | - | chr1_3:73712185-73712204 | Msa0139830:CDS | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | + | chr1_3:73712564-73712583 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | - | chr1_3:73712603-73712622 | Msa0139830:CDS | 25.0% |
| GGAAAGACATAAAAATTTCG+GGG | + | chr1_3:73710349-73710368 | None:intergenic | 30.0% | |
| TATGTCTTTCCTCAATGAAA+AGG | - | chr1_3:73710358-73710377 | Msa0139830:CDS | 30.0% | |
| !!! | TTTTTTCCTCCTTTTCATTG+AGG | + | chr1_3:73710370-73710389 | None:intergenic | 30.0% |
| !! | GTCAAAAGAAAATGCCATTT+TGG | - | chr1_3:73710397-73710416 | Msa0139830:CDS | 30.0% |
| TTGTCGATAAAACTCCAAAA+TGG | + | chr1_3:73710414-73710433 | None:intergenic | 30.0% | |
| AATTCCGTACATAAAGATTC+AGG | + | chr1_3:73710467-73710486 | None:intergenic | 30.0% | |
| AACAAAGATGTGAATTAGGA+GGG | - | chr1_3:73710504-73710523 | Msa0139830:CDS | 30.0% | |
| GTATATCAATGTTCAGTCTT+CGG | + | chr1_3:73710550-73710569 | None:intergenic | 30.0% | |
| GATTGGAATGAAATTTGGAA+TGG | - | chr1_3:73710625-73710644 | Msa0139830:CDS | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | + | chr1_3:73710696-73710715 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | - | chr1_3:73710749-73710768 | Msa0139830:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | + | chr1_3:73710827-73710846 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | - | chr1_3:73710833-73710852 | Msa0139830:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | + | chr1_3:73710837-73710856 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | + | chr1_3:73710866-73710885 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | + | chr1_3:73710903-73710922 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | + | chr1_3:73710904-73710923 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | - | chr1_3:73710913-73710932 | Msa0139830:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | - | chr1_3:73710914-73710933 | Msa0139830:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | - | chr1_3:73711193-73711212 | Msa0139830:CDS | 30.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | - | chr1_3:73711304-73711323 | Msa0139830:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | + | chr1_3:73711590-73711609 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | - | chr1_3:73711710-73711729 | Msa0139830:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | - | chr1_3:73711711-73711730 | Msa0139830:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | + | chr1_3:73711890-73711909 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | + | chr1_3:73711891-73711910 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | - | chr1_3:73711895-73711914 | Msa0139830:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | - | chr1_3:73711909-73711928 | Msa0139830:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | - | chr1_3:73712015-73712034 | Msa0139830:CDS | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | - | chr1_3:73712016-73712035 | Msa0139830:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | + | chr1_3:73712055-73712074 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | - | chr1_3:73712063-73712082 | Msa0139830:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | - | chr1_3:73712174-73712193 | Msa0139830:CDS | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | - | chr1_3:73712236-73712255 | Msa0139830:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | - | chr1_3:73712326-73712345 | Msa0139830:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | + | chr1_3:73712405-73712424 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | - | chr1_3:73712404-73712423 | Msa0139830:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | + | chr1_3:73712436-73712455 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | - | chr1_3:73712523-73712542 | Msa0139830:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | + | chr1_3:73712552-73712571 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | - | chr1_3:73712552-73712571 | Msa0139830:CDS | 30.0% | |
| ! | TATCGACAATTTGCTTGTGT+AGG | - | chr1_3:73710425-73710444 | Msa0139830:CDS | 35.0% |
| CAACAAAGATGTGAATTAGG+AGG | - | chr1_3:73710503-73710522 | Msa0139830:CDS | 35.0% | |
| TCAGTCTTCGGTTCATATTT+CGG | + | chr1_3:73710538-73710557 | None:intergenic | 35.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | + | chr1_3:73710803-73710822 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | + | chr1_3:73710891-73710910 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | - | chr1_3:73710894-73710913 | Msa0139830:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | - | chr1_3:73710920-73710939 | Msa0139830:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | - | chr1_3:73711031-73711050 | Msa0139830:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | - | chr1_3:73711168-73711187 | Msa0139830:CDS | 35.0% |
| ATGCTCGATAAAAGGAATCA+GGG | + | chr1_3:73711335-73711354 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | + | chr1_3:73711336-73711355 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | + | chr1_3:73711343-73711362 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | + | chr1_3:73711422-73711441 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | - | chr1_3:73711610-73711629 | Msa0139830:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | + | chr1_3:73711620-73711639 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | - | chr1_3:73711646-73711665 | Msa0139830:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | - | chr1_3:73711918-73711937 | Msa0139830:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | - | chr1_3:73711942-73711961 | Msa0139830:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | - | chr1_3:73711943-73711962 | Msa0139830:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | + | chr1_3:73712009-73712028 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | - | chr1_3:73712066-73712085 | Msa0139830:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | - | chr1_3:73712070-73712089 | Msa0139830:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | - | chr1_3:73712071-73712090 | Msa0139830:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | + | chr1_3:73712098-73712117 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | - | chr1_3:73712111-73712130 | Msa0139830:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | + | chr1_3:73712122-73712141 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | chr1_3:73712258-73712277 | Msa0139830:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | - | chr1_3:73712292-73712311 | Msa0139830:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | - | chr1_3:73712339-73712358 | Msa0139830:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | + | chr1_3:73712469-73712488 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | - | chr1_3:73712469-73712488 | Msa0139830:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | - | chr1_3:73712522-73712541 | Msa0139830:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | - | chr1_3:73712925-73712944 | Msa0139830:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | + | chr1_3:73712938-73712957 | None:intergenic | 35.0% | |
| GTCTTTCCTCAATGAAAAGG+AGG | - | chr1_3:73710361-73710380 | Msa0139830:CDS | 40.0% | |
| AGATGTGAATTAGGAGGGAT+TGG | - | chr1_3:73710509-73710528 | Msa0139830:CDS | 40.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | + | chr1_3:73710797-73710816 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | + | chr1_3:73710896-73710915 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | - | chr1_3:73710893-73710912 | Msa0139830:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | - | chr1_3:73710957-73710976 | Msa0139830:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | - | chr1_3:73710958-73710977 | Msa0139830:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | - | chr1_3:73710980-73710999 | Msa0139830:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | - | chr1_3:73711006-73711025 | Msa0139830:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | - | chr1_3:73711039-73711058 | Msa0139830:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | - | chr1_3:73711169-73711188 | Msa0139830:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | - | chr1_3:73711261-73711280 | Msa0139830:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | - | chr1_3:73711421-73711440 | Msa0139830:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | - | chr1_3:73711600-73711619 | Msa0139830:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | + | chr1_3:73711621-73711640 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | + | chr1_3:73711730-73711749 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | - | chr1_3:73711756-73711775 | Msa0139830:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | + | chr1_3:73711846-73711865 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | + | chr1_3:73711877-73711896 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | - | chr1_3:73711917-73711936 | Msa0139830:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | - | chr1_3:73711963-73711982 | Msa0139830:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | + | chr1_3:73712001-73712020 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | - | chr1_3:73712072-73712091 | Msa0139830:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | - | chr1_3:73712189-73712208 | Msa0139830:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | + | chr1_3:73712211-73712230 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | + | chr1_3:73712267-73712286 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | + | chr1_3:73712289-73712308 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | - | chr1_3:73712291-73712310 | Msa0139830:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | chr1_3:73712293-73712312 | Msa0139830:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | + | chr1_3:73712321-73712340 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | - | chr1_3:73712349-73712368 | Msa0139830:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | - | chr1_3:73712407-73712426 | Msa0139830:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | + | chr1_3:73712489-73712508 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | - | chr1_3:73712491-73712510 | Msa0139830:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | - | chr1_3:73712492-73712511 | Msa0139830:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | + | chr1_3:73712513-73712532 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | - | chr1_3:73712513-73712532 | Msa0139830:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | - | chr1_3:73712615-73712634 | Msa0139830:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | + | chr1_3:73712634-73712653 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | - | chr1_3:73712651-73712670 | Msa0139830:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | - | chr1_3:73712656-73712675 | Msa0139830:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | + | chr1_3:73712667-73712686 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | - | chr1_3:73712786-73712805 | Msa0139830:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | - | chr1_3:73712801-73712820 | Msa0139830:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | - | chr1_3:73712824-73712843 | Msa0139830:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | + | chr1_3:73712855-73712874 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | + | chr1_3:73712917-73712936 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | - | chr1_3:73712929-73712948 | Msa0139830:CDS | 40.0% | |
| ! | CGACAATTTGCTTGTGTAGG+CGG | - | chr1_3:73710428-73710447 | Msa0139830:CDS | 45.0% |
| GCAGCTGTCAATATATCTCG+CGG | + | chr1_3:73710596-73710615 | None:intergenic | 45.0% | |
| GCGAGATATATTGACAGCTG+CGG | - | chr1_3:73710595-73710614 | Msa0139830:CDS | 45.0% | |
| ACAGCTGCGGATCATTTGAT+TGG | - | chr1_3:73710608-73710627 | Msa0139830:CDS | 45.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | - | chr1_3:73710923-73710942 | Msa0139830:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | + | chr1_3:73710992-73711011 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | + | chr1_3:73711016-73711035 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | - | chr1_3:73711022-73711041 | Msa0139830:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | + | chr1_3:73711026-73711045 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | + | chr1_3:73711059-73711078 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | - | chr1_3:73711058-73711077 | Msa0139830:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | - | chr1_3:73711201-73711220 | Msa0139830:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | - | chr1_3:73711204-73711223 | Msa0139830:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | + | chr1_3:73711241-73711260 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | - | chr1_3:73711395-73711414 | Msa0139830:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | - | chr1_3:73711426-73711445 | Msa0139830:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | + | chr1_3:73711491-73711510 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | - | chr1_3:73711715-73711734 | Msa0139830:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | - | chr1_3:73711929-73711948 | Msa0139830:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | + | chr1_3:73711979-73711998 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | - | chr1_3:73711987-73712006 | Msa0139830:CDS | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | - | chr1_3:73712023-73712042 | Msa0139830:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | - | chr1_3:73712038-73712057 | Msa0139830:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | - | chr1_3:73712094-73712113 | Msa0139830:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | - | chr1_3:73712190-73712209 | Msa0139830:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | - | chr1_3:73712275-73712294 | Msa0139830:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | + | chr1_3:73712288-73712307 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | - | chr1_3:73712315-73712334 | Msa0139830:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | + | chr1_3:73712322-73712341 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | - | chr1_3:73712348-73712367 | Msa0139830:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | - | chr1_3:73712655-73712674 | Msa0139830:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | + | chr1_3:73712666-73712685 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | + | chr1_3:73712668-73712687 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | - | chr1_3:73712666-73712685 | Msa0139830:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | - | chr1_3:73712804-73712823 | Msa0139830:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | + | chr1_3:73712843-73712862 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | - | chr1_3:73712872-73712891 | Msa0139830:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | - | chr1_3:73712878-73712897 | Msa0139830:CDS | 45.0% |
| TTTGGGTCCTGGAGGATTGA+CGG | - | chr1_3:73710931-73710950 | Msa0139830:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | + | chr1_3:73710988-73711007 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | - | chr1_3:73711010-73711029 | Msa0139830:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | - | chr1_3:73711053-73711072 | Msa0139830:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | - | chr1_3:73711065-73711084 | Msa0139830:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | - | chr1_3:73711066-73711085 | Msa0139830:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | + | chr1_3:73711085-73711104 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | + | chr1_3:73711409-73711428 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | - | chr1_3:73711415-73711434 | Msa0139830:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | - | chr1_3:73711438-73711457 | Msa0139830:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | + | chr1_3:73711456-73711475 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | + | chr1_3:73711464-73711483 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | - | chr1_3:73711826-73711845 | Msa0139830:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | - | chr1_3:73711928-73711947 | Msa0139830:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | - | chr1_3:73711930-73711949 | Msa0139830:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | + | chr1_3:73711998-73712017 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | - | chr1_3:73712207-73712226 | Msa0139830:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | + | chr1_3:73712308-73712327 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | + | chr1_3:73712309-73712328 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | - | chr1_3:73712669-73712688 | Msa0139830:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | - | chr1_3:73712681-73712700 | Msa0139830:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | - | chr1_3:73712698-73712717 | Msa0139830:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | + | chr1_3:73712837-73712856 | None:intergenic | 50.0% |
| TTGGGTCCTGGAGGATTGAC+GGG | - | chr1_3:73710932-73710951 | Msa0139830:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | - | chr1_3:73710951-73710970 | Msa0139830:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | - | chr1_3:73711067-73711086 | Msa0139830:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | - | chr1_3:73711068-73711087 | Msa0139830:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | - | chr1_3:73711451-73711470 | Msa0139830:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | + | chr1_3:73711482-73711501 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | - | chr1_3:73711661-73711680 | Msa0139830:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | - | chr1_3:73711664-73711683 | Msa0139830:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | - | chr1_3:73711678-73711697 | Msa0139830:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | - | chr1_3:73711679-73711698 | Msa0139830:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | - | chr1_3:73712198-73712217 | Msa0139830:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | + | chr1_3:73712505-73712524 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | - | chr1_3:73712676-73712695 | Msa0139830:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | - | chr1_3:73712677-73712696 | Msa0139830:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | - | chr1_3:73712689-73712708 | Msa0139830:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | - | chr1_3:73712692-73712711 | Msa0139830:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | - | chr1_3:73712697-73712716 | Msa0139830:CDS | 55.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | - | chr1_3:73710933-73710952 | Msa0139830:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | + | chr1_3:73711481-73711500 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | + | chr1_3:73712081-73712100 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | + | chr1_3:73712504-73712523 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | - | chr1_3:73712501-73712520 | Msa0139830:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | - | chr1_3:73712707-73712726 | Msa0139830:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | - | chr1_3:73712708-73712727 | Msa0139830:CDS | 60.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | + | chr1_3:73710941-73710960 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | - | chr1_3:73711478-73711497 | Msa0139830:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | - | chr1_3:73712709-73712728 | Msa0139830:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | - | chr1_3:73712714-73712733 | Msa0139830:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 73710305 | 73712959 | 73710305 | ID=Msa0139830;Name=Msa0139830 |
| chr1_3 | mRNA | 73710305 | 73712959 | 73710305 | ID=Msa0139830-mRNA-1;Parent=Msa0139830;Name=Msa0139830-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|884 |
| chr1_3 | exon | 73710305 | 73712959 | 73710305 | ID=Msa0139830-mRNA-1:exon:25668;Parent=Msa0139830-mRNA-1 |
| chr1_3 | CDS | 73710305 | 73712959 | 73710305 | ID=Msa0139830-mRNA-1:cds;Parent=Msa0139830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
