Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305850 | sp|F4JCU0|SUA_ARATH | 53.103 | 580 | 201 | 14 | 1 | 560 | 1 | 529 | 5.41e-179 | 536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305850 | A0A072U387 | 94.086 | 558 | 29 | 1 | 1 | 554 | 1 | 558 | 0.0 | 987 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034180 | Msa1305850 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
| Msa0064920 | Msa1305850 | 0.825839 | 3.766942e-54 | -8.615850e-47 |
| Msa0081900 | Msa1305850 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
| Msa0084340 | Msa1305850 | 0.822007 | 2.981701e-53 | -8.615850e-47 |
| Msa0089980 | Msa1305850 | 0.800102 | 1.687358e-48 | -8.615850e-47 |
| Msa0090010 | Msa1305850 | 0.800273 | 1.557270e-48 | -8.615850e-47 |
| Msa0661630 | Msa1305850 | 0.813527 | 2.446403e-51 | -8.615850e-47 |
| Msa0749400 | Msa1305850 | 0.816384 | 5.686554e-52 | -8.615850e-47 |
| Msa0756380 | Msa1305850 | 0.814348 | 1.612442e-51 | -8.615850e-47 |
| Msa0128180 | Msa1305850 | 0.807859 | 4.115116e-50 | -8.615850e-47 |
| Msa0131290 | Msa1305850 | 0.813258 | 2.803853e-51 | -8.615850e-47 |
| Msa0174360 | Msa1305850 | 0.801149 | 1.031610e-48 | -8.615850e-47 |
| Msa0177170 | Msa1305850 | 0.811204 | 7.870875e-51 | -8.615850e-47 |
| Msa1305850 | Msa1464370 | 0.829432 | 5.165616e-55 | -8.615850e-47 |
| Msa0410840 | Msa1305850 | 0.805948 | 1.043230e-49 | -8.615850e-47 |
| Msa1095790 | Msa1305850 | 0.813445 | 2.549927e-51 | -8.615850e-47 |
| Msa0302890 | Msa1305850 | 0.810503 | 1.115754e-50 | -8.615850e-47 |
| Msa0305330 | Msa1305850 | 0.807339 | 5.305954e-50 | -8.615850e-47 |
| Msa1111290 | Msa1305850 | 0.817032 | 4.068479e-52 | -8.615850e-47 |
| Msa1177930 | Msa1305850 | 0.819451 | 1.153770e-52 | -8.615850e-47 |
| Msa0972070 | Msa1305850 | 0.806260 | 8.968529e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305850 | MtrunA17_Chr8g0369281 | 94.086 | 558 | 29 | 1 | 1 | 554 | 1 | 558 | 0.0 | 987 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305850 | AT3G54230.2 | 53.276 | 580 | 201 | 13 | 1 | 560 | 1 | 530 | 0.0 | 542 |
| Msa1305850 | AT3G54230.5 | 53.103 | 580 | 201 | 14 | 1 | 560 | 1 | 529 | 5.50e-180 | 536 |
| Msa1305850 | AT3G54230.1 | 53.103 | 580 | 201 | 14 | 1 | 560 | 1 | 529 | 5.50e-180 | 536 |
| Msa1305850 | AT3G54230.4 | 54.191 | 513 | 179 | 12 | 68 | 560 | 9 | 485 | 4.06e-163 | 491 |
| Msa1305850 | AT3G54230.3 | 69.600 | 250 | 69 | 3 | 316 | 560 | 2 | 249 | 6.93e-116 | 362 |
Find 167 sgRNAs with CRISPR-Local
Find 608 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATCTTCAATCGCGATTT+TGG | 0.164386 | 8_3:-69657592 | Msa1305850:five_prime_UTR |
| CCTCGAGGAGACCTAGATTT+TGG | 0.204753 | 8_3:+69655982 | None:intergenic |
| AGTTGGACTCACCGAAAATT+TGG | 0.218238 | 8_3:+69656888 | None:intergenic |
| TTCCATCATGATGCTTTAGA+TGG | 0.250599 | 8_3:-69656588 | Msa1305850:CDS |
| GACAAACCTGCCAGGTTTGC+AGG | 0.275382 | 8_3:-69656333 | Msa1305850:CDS |
| ATGGCAGAGGAGATAGTAAT+TGG | 0.276400 | 8_3:-69656179 | Msa1305850:CDS |
| AGCATACTGGGGCCTGGATC+AGG | 0.297875 | 8_3:-69653940 | Msa1305850:CDS |
| AAACCATCCATTTGGTTGTA+TGG | 0.322439 | 8_3:+69656444 | None:intergenic |
| CGATTGAAGATCTAGGGTTT+TGG | 0.338726 | 8_3:+69657601 | None:intergenic |
| TATATTTGTGTAGGCGGAAT+GGG | 0.350686 | 8_3:-69655622 | Msa1305850:intron |
| ATATTTAATTAAACCTTGAT+TGG | 0.353213 | 8_3:+69654658 | None:intergenic |
| GATTATGCATATGATGATTA+TGG | 0.353347 | 8_3:-69656297 | Msa1305850:CDS |
| GGGCCTGGATCAGGGGTGTC+AGG | 0.353603 | 8_3:-69653931 | Msa1305850:CDS |
| GTTATAAAAGAGAGAAGTTC+TGG | 0.362565 | 8_3:-69655579 | Msa1305850:CDS |
| AGCTACCCGGGGCGAAGAAA+TGG | 0.382145 | 8_3:-69657190 | Msa1305850:exon |
| TTATCAAATTCAACATCCTT+AGG | 0.382397 | 8_3:-69654854 | Msa1305850:CDS |
| CTTCGCGATAACTTCTACTA+CGG | 0.389763 | 8_3:+69655953 | None:intergenic |
| AACCTTGATTGGAGCATGCT+TGG | 0.392054 | 8_3:+69654669 | None:intergenic |
| CCCTCTGATGTTTATCATCA+TGG | 0.392780 | 8_3:+69655884 | None:intergenic |
| CATGATGGAAATTATTTCTC+TGG | 0.394527 | 8_3:+69656601 | None:intergenic |
| TGGTTGTATGGTTCATGATA+AGG | 0.394995 | 8_3:+69656456 | None:intergenic |
| CTCTAAACCTTTCTTTCCTA+AGG | 0.395714 | 8_3:+69654838 | None:intergenic |
| AAGTAGCACATACAAGGATT+TGG | 0.398223 | 8_3:+69655706 | None:intergenic |
| GACTATCCTCCCTCCGATGA+TGG | 0.399959 | 8_3:+69656256 | None:intergenic |
| CTTGAATCCACAGGCTCTTG+AGG | 0.400098 | 8_3:-69656931 | Msa1305850:intron |
| CCACAGGCTCTTGAGGGTTA+TGG | 0.407802 | 8_3:-69656924 | Msa1305850:intron |
| ATGATGATCATCCAAAATCT+AGG | 0.409776 | 8_3:-69655993 | Msa1305850:CDS |
| ACGCCGGACTTCCTGCTATC+AGG | 0.411534 | 8_3:-69655120 | Msa1305850:intron |
| TCAACATCCTTAGGAAAGAA+AGG | 0.415602 | 8_3:-69654845 | Msa1305850:CDS |
| CGCGATCTCGTTCTCGATCT+CGG | 0.419087 | 8_3:-69656068 | Msa1305850:CDS |
| CTTAGGAAAGAAAGGTTTAG+AGG | 0.419096 | 8_3:-69654837 | Msa1305850:CDS |
| AAAGCTCTTGACTTAACAAA+TGG | 0.431454 | 8_3:-69654012 | Msa1305850:CDS |
| GGAACGGCCCTTGAGAAGAA+TGG | 0.437747 | 8_3:-69653991 | Msa1305850:CDS |
| TTCATCGTAACCCCTCCGTT+TGG | 0.440674 | 8_3:+69656518 | None:intergenic |
| AACGGGAACGAGAGTGAGAA+TGG | 0.442552 | 8_3:+69656031 | None:intergenic |
| GCTATGCACTGCATCAAGGC+TGG | 0.443647 | 8_3:-69657158 | Msa1305850:CDS |
| AAAATCGCGATTGAAGATCT+AGG | 0.443749 | 8_3:+69657594 | None:intergenic |
| GATTTGGTATAGATCTTCTT+CGG | 0.446533 | 8_3:+69655722 | None:intergenic |
| TGTATTGGTTGTTCGTGGAT+TGG | 0.448938 | 8_3:-69654731 | Msa1305850:CDS |
| CTCTGGTAAACAGCATCCCT+TGG | 0.450563 | 8_3:+69656618 | None:intergenic |
| TTCCAAGCATGCTCCAATCA+AGG | 0.454446 | 8_3:-69654671 | Msa1305850:intron |
| CACTGGCCAACAGCAGGTCC+TGG | 0.454595 | 8_3:+69656549 | None:intergenic |
| ATTTGTTAAGTCAAGAGCTT+TGG | 0.455439 | 8_3:+69654014 | None:intergenic |
| GTTCCTGACACCCCTGATCC+AGG | 0.461257 | 8_3:+69653928 | None:intergenic |
| GATCCCTAAAACCATCCATT+TGG | 0.466333 | 8_3:+69656436 | None:intergenic |
| GCATTACAATACCATCTGAT+TGG | 0.472202 | 8_3:-69655175 | Msa1305850:CDS |
| AATAATATGGACCTGATAGC+AGG | 0.472803 | 8_3:+69655109 | None:intergenic |
| ATCAGGTCCAACTCATGTAT+TGG | 0.475662 | 8_3:-69654746 | Msa1305850:intron |
| ACGGTCATGCCCTGCAAACC+TGG | 0.477713 | 8_3:+69656323 | None:intergenic |
| ACTCATGTATTGGTTGTTCG+TGG | 0.478062 | 8_3:-69654736 | Msa1305850:CDS |
| GCATACTGGGGCCTGGATCA+GGG | 0.478490 | 8_3:-69653939 | Msa1305850:CDS |
| TTGAATCCACAGGCTCTTGA+GGG | 0.480189 | 8_3:-69656930 | Msa1305850:intron |
| ACTGGAGGTGCGGGTTCAGA+TGG | 0.481394 | 8_3:-69655227 | Msa1305850:CDS |
| TCATGAACCATACAACCAAA+TGG | 0.484271 | 8_3:-69656451 | Msa1305850:CDS |
| GCATATATTACAGGGGAGAA+AGG | 0.486793 | 8_3:-69657231 | Msa1305850:intron |
| TCATGTTTCCTATGCAGACT+TGG | 0.489063 | 8_3:+69656096 | None:intergenic |
| TGTTGCAGTAGTAAGCCAAC+TGG | 0.494176 | 8_3:-69655245 | Msa1305850:intron |
| CATGAGAAGGATTATGATCA+TGG | 0.494655 | 8_3:-69656234 | Msa1305850:CDS |
| ATGAAGATTATCCACTTGAA+AGG | 0.506271 | 8_3:-69656500 | Msa1305850:CDS |
| TCATGCCCTGCAAACCTGGC+AGG | 0.506625 | 8_3:+69656327 | None:intergenic |
| CAGGATCCATTTCTTCGCCC+CGG | 0.506762 | 8_3:+69657184 | None:intergenic |
| TCCATCATGATGCTTTAGAT+GGG | 0.508035 | 8_3:-69656587 | Msa1305850:CDS |
| GAACGGCCCTTGAGAAGAAT+GGG | 0.509456 | 8_3:-69653990 | Msa1305850:CDS |
| TTGCCACCAGGACCTGCTGT+TGG | 0.510153 | 8_3:-69656555 | Msa1305850:CDS |
| TCCGTTTGGATTGACTCCAC+TGG | 0.511551 | 8_3:+69656532 | None:intergenic |
| GGAAAGAAAGGTTTAGAGGC+GGG | 0.512508 | 8_3:-69654833 | Msa1305850:intron |
| ACGAGAGTGAGAATGGGAAC+GGG | 0.512702 | 8_3:+69656038 | None:intergenic |
| TTATATTTGTGTAGGCGGAA+TGG | 0.514760 | 8_3:-69655623 | Msa1305850:intron |
| GGACCTGATAGCAGGAAGTC+CGG | 0.515122 | 8_3:+69655117 | None:intergenic |
| GAATCTGCCCATTCTTCTCA+AGG | 0.518240 | 8_3:+69653983 | None:intergenic |
| ACTATCCTCCCTCCGATGAT+GGG | 0.521610 | 8_3:+69656257 | None:intergenic |
| AGGATCCATTTCTTCGCCCC+GGG | 0.522750 | 8_3:+69657185 | None:intergenic |
| GATAATGAAATATCTGCTGC+AGG | 0.523591 | 8_3:+69654872 | None:intergenic |
| TGAAGATTATCCACTTGAAA+GGG | 0.524291 | 8_3:-69656499 | Msa1305850:CDS |
| GGGAGCTGCACAAGTAATGA+TGG | 0.527501 | 8_3:-69655440 | Msa1305850:CDS |
| CAGGACCTGCTGTTGGCCAG+TGG | 0.527599 | 8_3:-69656548 | Msa1305850:CDS |
| TCTCGAAACTTATCATACTC+CGG | 0.528260 | 8_3:+69656396 | None:intergenic |
| CCCTCCGATGATGGGAAACA+CGG | 0.531306 | 8_3:+69656265 | None:intergenic |
| CGTCTAGATTCCCTTTCAAG+TGG | 0.532958 | 8_3:+69656489 | None:intergenic |
| GAGCGCGTGTCGAGCGTGAG+AGG | 0.533207 | 8_3:+69657648 | None:intergenic |
| ATGGACAAACTCGGAGGTGA+TGG | 0.536034 | 8_3:-69655421 | Msa1305850:CDS |
| AGTAAGCCAACTGGAGGTGC+GGG | 0.536439 | 8_3:-69655236 | Msa1305850:CDS |
| ATTTCCACGAGATTGCGAAC+GGG | 0.537039 | 8_3:+69656014 | None:intergenic |
| TTCTGAATCTAGAGCTACCC+GGG | 0.537066 | 8_3:-69657202 | Msa1305850:five_prime_UTR |
| AAATCGCGATTGAAGATCTA+GGG | 0.538122 | 8_3:+69657595 | None:intergenic |
| GATGGGAAACACGGGACTTG+TGG | 0.540313 | 8_3:+69656274 | None:intergenic |
| CGAACAACCAATACATGAGT+TGG | 0.543956 | 8_3:+69654739 | None:intergenic |
| AGAAGTTCTGGCATCTCTCG+TGG | 0.544409 | 8_3:-69655567 | Msa1305850:CDS |
| TCTGCAACTGTTGTTGTGAA+AGG | 0.551541 | 8_3:-69655762 | Msa1305850:CDS |
| CGTTCCCGTTCGCAATCTCG+TGG | 0.552388 | 8_3:-69656018 | Msa1305850:CDS |
| ACAAACCTGCCAGGTTTGCA+GGG | 0.553108 | 8_3:-69656332 | Msa1305850:CDS |
| TGATGCAGTGCATAGCGACC+AGG | 0.553313 | 8_3:+69657165 | None:intergenic |
| CTCGAAACTTATCATACTCC+GGG | 0.555731 | 8_3:+69656397 | None:intergenic |
| ATAGCGGAGCATTTCCTCAT+CGG | 0.556186 | 8_3:+69654699 | None:intergenic |
| CTATGCACTGCATCAAGGCT+GGG | 0.556415 | 8_3:-69657157 | Msa1305850:CDS |
| TGACTCCACTGGCCAACAGC+AGG | 0.556526 | 8_3:+69656543 | None:intergenic |
| CGGGGCGAAGAAATGGATCC+TGG | 0.557552 | 8_3:-69657183 | Msa1305850:exon |
| GAGACAAGAGATGTCTTAGT+CGG | 0.557865 | 8_3:-69656128 | Msa1305850:CDS |
| CTCACCGAAAATTTGGCTCA+TGG | 0.559554 | 8_3:+69656895 | None:intergenic |
| AGACAAGAGATGTCTTAGTC+GGG | 0.560282 | 8_3:-69656127 | Msa1305850:CDS |
| CATACTGGGGCCTGGATCAG+GGG | 0.561238 | 8_3:-69653938 | Msa1305850:CDS |
| GAGGCTATGACAAACCTGCC+AGG | 0.562749 | 8_3:-69656341 | Msa1305850:CDS |
| TTCACAACAACAGTTGCAGA+TGG | 0.562787 | 8_3:+69655765 | None:intergenic |
| GCCAGTGGAGTCAATCCAAA+CGG | 0.563617 | 8_3:-69656533 | Msa1305850:CDS |
| ACGGGAACGAGAGTGAGAAT+GGG | 0.566571 | 8_3:+69656032 | None:intergenic |
| CATTTCCACGAGATTGCGAA+CGG | 0.567784 | 8_3:+69656013 | None:intergenic |
| TAGTAAGCCAACTGGAGGTG+CGG | 0.569834 | 8_3:-69655237 | Msa1305850:CDS |
| AACGAGAGTGAGAATGGGAA+CGG | 0.571736 | 8_3:+69656037 | None:intergenic |
| AAAAGGATTAATACCACGGA+AGG | 0.572345 | 8_3:+69655525 | None:intergenic |
| TCTGAACCCGCACCTCCAGT+TGG | 0.572606 | 8_3:+69655230 | None:intergenic |
| GATTCTGATTATGATAGAGA+TGG | 0.579184 | 8_3:-69656198 | Msa1305850:CDS |
| CCCCATCTAAAGCATCATGA+TGG | 0.580245 | 8_3:+69656586 | None:intergenic |
| ATTCTGAATCTAGAGCTACC+CGG | 0.583491 | 8_3:-69657203 | Msa1305850:five_prime_UTR |
| AGTCCCGTGTTTCCCATCAT+CGG | 0.583842 | 8_3:-69656269 | Msa1305850:CDS |
| GCAGAGGAGATAGTAATTGG+AGG | 0.585096 | 8_3:-69656176 | Msa1305850:CDS |
| CCATCATGATGCTTTAGATG+GGG | 0.585512 | 8_3:-69656586 | Msa1305850:CDS |
| AAGTTCACTCACGTCTCAAG+AGG | 0.586893 | 8_3:-69654518 | Msa1305850:CDS |
| GAACCATACAACCAAATGGA+TGG | 0.589601 | 8_3:-69656447 | Msa1305850:CDS |
| GGTCGCTATGCACTGCATCA+AGG | 0.590421 | 8_3:-69657162 | Msa1305850:CDS |
| TGATAGAAGTGAAAGACGCA+TGG | 0.596584 | 8_3:-69655908 | Msa1305850:CDS |
| GTGGAGTCAATCCAAACGGA+GGG | 0.598874 | 8_3:-69656529 | Msa1305850:CDS |
| TATAACACGAACATGACGAA+GGG | 0.600002 | 8_3:+69655596 | None:intergenic |
| GAGTATGATAAGTTTCGAGA+TGG | 0.606518 | 8_3:-69656393 | Msa1305850:CDS |
| GATTATGATAGAGATGGCAG+AGG | 0.607014 | 8_3:-69656192 | Msa1305850:CDS |
| CCATGATGATAAACATCAGA+GGG | 0.607944 | 8_3:-69655884 | Msa1305850:CDS |
| GGCTCTTGAGGGTTATGGTG+CGG | 0.607967 | 8_3:-69656919 | Msa1305850:CDS |
| CCGTGTTTCCCATCATCGGA+GGG | 0.608242 | 8_3:-69656265 | Msa1305850:CDS |
| GAGGGAGGATAGTCATGAGA+AGG | 0.608349 | 8_3:-69656247 | Msa1305850:CDS |
| TTTGGACACAGCATAATCAT+CGG | 0.608492 | 8_3:-69657574 | Msa1305850:intron |
| AGAAGGATTATGATCATGGT+CGG | 0.614589 | 8_3:-69656230 | Msa1305850:CDS |
| TCTTGACTTAACAAATGGAA+CGG | 0.614711 | 8_3:-69654007 | Msa1305850:CDS |
| AATCTGCCCATTCTTCTCAA+GGG | 0.617830 | 8_3:+69653984 | None:intergenic |
| ATTGAAAACTATAGTGATCG+AGG | 0.618558 | 8_3:-69656360 | Msa1305850:CDS |
| ATATTTGTGTAGGCGGAATG+GGG | 0.619734 | 8_3:-69655621 | Msa1305850:intron |
| TCAATGCACATCCAATCAGA+TGG | 0.621415 | 8_3:+69655164 | None:intergenic |
| CATCATATGCATAATCATCA+CGG | 0.621746 | 8_3:+69656304 | None:intergenic |
| ATGCTCTTATGACTGTGACC+TGG | 0.622115 | 8_3:+69655194 | None:intergenic |
| TCATGATGCTTTAGATGGGG+AGG | 0.624868 | 8_3:-69656583 | Msa1305850:CDS |
| CAAGTAATGATGGACAAACT+CGG | 0.627228 | 8_3:-69655430 | Msa1305850:CDS |
| GTGGCGCTTATGATGAAAGA+CGG | 0.630391 | 8_3:-69656659 | Msa1305850:CDS |
| CCTCCGATGATGGGAAACAC+GGG | 0.635851 | 8_3:+69656266 | None:intergenic |
| TTATAGATGAAAGATATCCA+AGG | 0.636436 | 8_3:-69656635 | Msa1305850:CDS |
| TGGCCAACAGCAGGTCCTGG+TGG | 0.637883 | 8_3:+69656552 | None:intergenic |
| TATAGATGAAAGATATCCAA+GGG | 0.639907 | 8_3:-69656634 | Msa1305850:CDS |
| CAAATCACATAATTAGCACA+TGG | 0.641014 | 8_3:-69649677 | Msa1305850:CDS |
| TCAGATGGAGCTATGAAACC+AGG | 0.644539 | 8_3:-69655212 | Msa1305850:CDS |
| TTATAACACGAACATGACGA+AGG | 0.646033 | 8_3:+69655595 | None:intergenic |
| CTACTACGGCTTCGACCTCG+AGG | 0.646816 | 8_3:+69655967 | None:intergenic |
| TTTGTGATAAATTGATGATG+CGG | 0.657970 | 8_3:+69649733 | None:intergenic |
| TCGGGAGATTGACATGTACC+CGG | 0.659241 | 8_3:-69656415 | Msa1305850:CDS |
| AGGAAAGAAAGGTTTAGAGG+CGG | 0.660970 | 8_3:-69654834 | Msa1305850:CDS |
| ATTATGTGATTTGACGATGG+TGG | 0.666175 | 8_3:+69649687 | None:intergenic |
| TCAGAGGGAGCATTATTCTG+TGG | 0.667797 | 8_3:-69655869 | Msa1305850:intron |
| TGTTTCCCATCATCGGAGGG+AGG | 0.671205 | 8_3:-69656262 | Msa1305850:CDS |
| TGCAGTAGTAAGCCAACTGG+AGG | 0.673279 | 8_3:-69655242 | Msa1305850:intron |
| CTAATTATGTGATTTGACGA+TGG | 0.674436 | 8_3:+69649684 | None:intergenic |
| ACCATGATGATAAACATCAG+AGG | 0.676113 | 8_3:-69655885 | Msa1305850:CDS |
| ATAACACGAACATGACGAAG+GGG | 0.681089 | 8_3:+69655597 | None:intergenic |
| AGTGGAGTCAATCCAAACGG+AGG | 0.684246 | 8_3:-69656530 | Msa1305850:CDS |
| AATCTCAAATCATCTTCACA+AGG | 0.685583 | 8_3:-69649769 | Msa1305850:CDS |
| GCAGGAGCATCATCTGTGCG+TGG | 0.698348 | 8_3:+69654890 | None:intergenic |
| ATTGGATGAAAATGCCGATG+AGG | 0.729485 | 8_3:-69654713 | Msa1305850:CDS |
| TGGAGTCAATCCAAACGGAG+GGG | 0.731491 | 8_3:-69656528 | Msa1305850:CDS |
| CATGCTTGGAAAACTCATAG+CGG | 0.748014 | 8_3:+69654683 | None:intergenic |
| TCTGAATCTAGAGCTACCCG+GGG | 0.750164 | 8_3:-69657201 | Msa1305850:five_prime_UTR |
| GTAATGATGGACAAACTCGG+AGG | 0.761780 | 8_3:-69655427 | Msa1305850:CDS |
| CCAAAATCTAGGTCTCCTCG+AGG | 0.773497 | 8_3:-69655982 | Msa1305850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTAATTTATTATTA+GGG | + | chr8_3:69654247-69654266 | None:intergenic | 0.0% |
| !! | ATTATTATTAATTTATTATT+AGG | + | chr8_3:69654248-69654267 | None:intergenic | 0.0% |
| !!! | TAGGTATAATTTTTATTTTT+AGG | - | chr8_3:69651973-69651992 | Msa1305850:intron | 10.0% |
| !!! | AGGTATAATTTTTATTTTTA+GGG | - | chr8_3:69651974-69651993 | Msa1305850:intron | 10.0% |
| !!! | TTTGTTAACTAAATATTTTT+TGG | - | chr8_3:69651997-69652016 | Msa1305850:intron | 10.0% |
| !!! | ATATTATTTTAAAGTATCTT+TGG | + | chr8_3:69654296-69654315 | None:intergenic | 10.0% |
| !!! | ATCTATATAAATTATTTTTC+GGG | - | chr8_3:69656357-69656376 | Msa1305850:CDS | 10.0% |
| !! | TTTATTAAATATTATATGTG+GGG | + | chr8_3:69657078-69657097 | None:intergenic | 10.0% |
| !! | CATTTATTAAATATTATATG+TGG | + | chr8_3:69657080-69657099 | None:intergenic | 10.0% |
| !! | AAGTGAATAAAAATTTGAAT+TGG | + | chr8_3:69649840-69649859 | None:intergenic | 15.0% |
| !!! | CAAATTTTTATTCACTTATT+AGG | - | chr8_3:69649843-69649862 | Msa1305850:intron | 15.0% |
| !! | AATATAAAGAAGTAAATTAG+AGG | + | chr8_3:69651667-69651686 | None:intergenic | 15.0% |
| !! | AAAATCATTTATATTTGTGT+AGG | - | chr8_3:69651704-69651723 | Msa1305850:intron | 15.0% |
| !! | TTACAACTCAATTAAAAAAT+GGG | + | chr8_3:69652355-69652374 | None:intergenic | 15.0% |
| !! | ATATTTAATTAAACCTTGAT+TGG | + | chr8_3:69652680-69652699 | None:intergenic | 15.0% |
| !! | AATATAATAACAACATAGAT+TGG | + | chr8_3:69653914-69653933 | None:intergenic | 15.0% |
| !!! | TCAATTTTTAAAGTTTCAAA+TGG | - | chr8_3:69654145-69654164 | Msa1305850:intron | 15.0% |
| !! | TTTAAAAGATCAATAATTCT+TGG | - | chr8_3:69655433-69655452 | Msa1305850:CDS | 15.0% |
| !!! | GTATACTATATTTTTTGAAA+TGG | + | chr8_3:69655501-69655520 | None:intergenic | 15.0% |
| !! | AATGTTAAAATCTATAAATC+AGG | - | chr8_3:69655573-69655592 | Msa1305850:CDS | 15.0% |
| !!! | AAATACATAAATATTGATTC+TGG | - | chr8_3:69656020-69656039 | Msa1305850:CDS | 15.0% |
| !! | TAATTTATATAGATTTCTTG+TGG | + | chr8_3:69656351-69656370 | None:intergenic | 15.0% |
| !!! | GTGAATTTTATTTACTAAAG+AGG | + | chr8_3:69650228-69650247 | None:intergenic | 20.0% |
| !! | TTTCATTCATAATTTCTCTA+AGG | + | chr8_3:69650288-69650307 | None:intergenic | 20.0% |
| !!! | ATGTTTGTTTTAGAATTATG+TGG | - | chr8_3:69650568-69650587 | Msa1305850:intron | 20.0% |
| !!! | TGTTTGTTTTAGAATTATGT+GGG | - | chr8_3:69650569-69650588 | Msa1305850:intron | 20.0% |
| !! | TACAATATTGGAAAATCAAA+AGG | + | chr8_3:69651830-69651849 | None:intergenic | 20.0% |
| !!! | TTTTCCAATATTGTACATTT+TGG | - | chr8_3:69651835-69651854 | Msa1305850:intron | 20.0% |
| !!! | TGATACTAAGATTGTTATTA+TGG | - | chr8_3:69651867-69651886 | Msa1305850:intron | 20.0% |
| !!! | GATACTAAGATTGTTATTAT+GGG | - | chr8_3:69651868-69651887 | Msa1305850:intron | 20.0% |
| !!! | GAAAACTTTTCTTTGAATAT+AGG | - | chr8_3:69651954-69651973 | Msa1305850:intron | 20.0% |
| !! | AATTGATGCAAGAAATAATA+TGG | + | chr8_3:69652242-69652261 | None:intergenic | 20.0% |
| !! | CTTACAACTCAATTAAAAAA+TGG | + | chr8_3:69652356-69652375 | None:intergenic | 20.0% |
| !!! | TTAATAATTTGCATGTAATC+AGG | - | chr8_3:69652572-69652591 | Msa1305850:intron | 20.0% |
| !!! | AACTAATTTATCCTTTTACT+CGG | - | chr8_3:69652707-69652726 | Msa1305850:intron | 20.0% |
| !!! | TGCATTTGTACATTTTTATT+CGG | - | chr8_3:69652843-69652862 | Msa1305850:intron | 20.0% |
| !! | AAAAAATCTAAAGGATCATT+AGG | + | chr8_3:69652884-69652903 | None:intergenic | 20.0% |
| !!! | TTTTCATATTGTTGAAATTG+TGG | - | chr8_3:69653501-69653520 | Msa1305850:intron | 20.0% |
| !! | TTTCATATTGTTGAAATTGT+GGG | - | chr8_3:69653502-69653521 | Msa1305850:intron | 20.0% |
| !! | AAATCCTAGCAATAATAATA+AGG | - | chr8_3:69653654-69653673 | Msa1305850:intron | 20.0% |
| !! | AATCCTAGCAATAATAATAA+GGG | - | chr8_3:69653655-69653674 | Msa1305850:intron | 20.0% |
| !! | AACACTATATTAAAGGATTA+GGG | - | chr8_3:69654854-69654873 | Msa1305850:CDS | 20.0% |
| !!! | ATTAGGGTTATATTTAAGAT+TGG | - | chr8_3:69654870-69654889 | Msa1305850:CDS | 20.0% |
| !!! | TTAGGGTTATATTTAAGATT+GGG | - | chr8_3:69654871-69654890 | Msa1305850:CDS | 20.0% |
| !!! | TCAAAGTAAGGTTTTATAAA+AGG | - | chr8_3:69654970-69654989 | Msa1305850:intron | 20.0% |
| !! | CTACAATACTATTAGATATT+TGG | + | chr8_3:69655300-69655319 | None:intergenic | 20.0% |
| !! | TTTATACCAAATATGACATA+AGG | - | chr8_3:69655715-69655734 | Msa1305850:intron | 20.0% |
| !! | ATTGTTACATAACTGTTTAA+GGG | - | chr8_3:69655864-69655883 | Msa1305850:intron | 20.0% |
| !! | AAAAATAAGATAATGCATCA+GGG | + | chr8_3:69656521-69656540 | None:intergenic | 20.0% |
| !! | TAAAAAATCAAGAGAAACAA+AGG | + | chr8_3:69656626-69656645 | None:intergenic | 20.0% |
| !!! | TTTATCTCATCTTTTTTGTT+TGG | + | chr8_3:69656921-69656940 | None:intergenic | 20.0% |
| !! | AAATTTCCTCATTATCTTAA+TGG | + | chr8_3:69656995-69657014 | None:intergenic | 20.0% |
| !! | ATTAAGATAATGAGGAAATT+TGG | - | chr8_3:69656994-69657013 | Msa1305850:intron | 20.0% |
| !!! | CAAATTCAATCTTTTGTAAT+TGG | + | chr8_3:69657042-69657061 | None:intergenic | 20.0% |
| !! | CAATTAATCAAATAACTTCA+AGG | - | chr8_3:69657103-69657122 | Msa1305850:intron | 20.0% |
| !! | ATGTTTCAGATTTATGTTTA+AGG | + | chr8_3:69657260-69657279 | None:intergenic | 20.0% |
| ! | TATTAGGATCATAATTACCT+TGG | - | chr8_3:69649859-69649878 | Msa1305850:intron | 25.0% |
| ! | AAACTAAATGATCTTAACCA+AGG | + | chr8_3:69649879-69649898 | None:intergenic | 25.0% |
| ! | TTCATAGATGAATGAATGAA+TGG | - | chr8_3:69649900-69649919 | Msa1305850:intron | 25.0% |
| !! | AGTTATTGGTTATTGAATCA+TGG | - | chr8_3:69650060-69650079 | Msa1305850:intron | 25.0% |
| ! | TAGAAATGTAGATGATAAGT+AGG | + | chr8_3:69650484-69650503 | None:intergenic | 25.0% |
| ! | ACTTATCATCTACATTTCTA+TGG | - | chr8_3:69650484-69650503 | Msa1305850:intron | 25.0% |
| ! | TTATAGATGAAAGATATCCA+AGG | - | chr8_3:69650700-69650719 | Msa1305850:intron | 25.0% |
| ! | TATAGATGAAAGATATCCAA+GGG | - | chr8_3:69650701-69650720 | Msa1305850:intron | 25.0% |
| !! | ATCACTATAGTTTTCAATGT+TGG | + | chr8_3:69650973-69650992 | None:intergenic | 25.0% |
| ! | GATTATGCATATGATGATTA+TGG | - | chr8_3:69651038-69651057 | Msa1305850:intron | 25.0% |
| ! | GTTAAGATAATCACCTAAAA+AGG | + | chr8_3:69651513-69651532 | None:intergenic | 25.0% |
| ! | ATCATTTATATTTGTGTAGG+CGG | - | chr8_3:69651707-69651726 | Msa1305850:intron | 25.0% |
| ! | AATCAAAAGGATTAATACCA+CGG | + | chr8_3:69651817-69651836 | None:intergenic | 25.0% |
| ! | GAAACCAAAATGTACAATAT+TGG | + | chr8_3:69651842-69651861 | None:intergenic | 25.0% |
| !! | AAGATTGTTATTATGGGATT+AGG | - | chr8_3:69651874-69651893 | Msa1305850:intron | 25.0% |
| !! | AGATTGTTATTATGGGATTA+GGG | - | chr8_3:69651875-69651894 | Msa1305850:intron | 25.0% |
| ! | ATTAGCATGTCTAAATTAGT+TGG | - | chr8_3:69652320-69652339 | Msa1305850:intron | 25.0% |
| ! | TTAGCATGTCTAAATTAGTT+GGG | - | chr8_3:69652321-69652340 | Msa1305850:intron | 25.0% |
| !! | TACATGTGTATTGATAAGAA+TGG | - | chr8_3:69652386-69652405 | Msa1305850:intron | 25.0% |
| ! | TTATCAAATTCAACATCCTT+AGG | - | chr8_3:69652481-69652500 | Msa1305850:intron | 25.0% |
| !! | TTTGTACATTTTTATTCGGT+AGG | - | chr8_3:69652847-69652866 | Msa1305850:intron | 25.0% |
| ! | CATCAGAAGAAAAAATCTAA+AGG | + | chr8_3:69652893-69652912 | None:intergenic | 25.0% |
| !!! | TGAATTCGTACTTTTAGTTT+TGG | - | chr8_3:69653044-69653063 | Msa1305850:intron | 25.0% |
| ! | GGTAGAATTCATTCAAATAT+AGG | + | chr8_3:69653109-69653128 | None:intergenic | 25.0% |
| ! | AAACACAAATAGAAAGCTAT+TGG | + | chr8_3:69653180-69653199 | None:intergenic | 25.0% |
| !!! | ATGCTAATATACCCATTTTT+AGG | - | chr8_3:69653286-69653305 | Msa1305850:intron | 25.0% |
| ! | AAACCAAATCCCTATTTATA+GGG | - | chr8_3:69653602-69653621 | Msa1305850:intron | 25.0% |
| ! | TTTGTGTATCCCTATAAATA+GGG | + | chr8_3:69653614-69653633 | None:intergenic | 25.0% |
| !! | CAAAAGGGAAATTTTATCTT+GGG | + | chr8_3:69654185-69654204 | None:intergenic | 25.0% |
| ! | TTATAATAACTAGTGCAATC+TGG | - | chr8_3:69654569-69654588 | Msa1305850:intron | 25.0% |
| ! | TGTCAACAACACTATATTAA+AGG | - | chr8_3:69654847-69654866 | Msa1305850:CDS | 25.0% |
| ! | CAACACTATATTAAAGGATT+AGG | - | chr8_3:69654853-69654872 | Msa1305850:CDS | 25.0% |
| ! | CTATATCATACTTCAAAGTA+AGG | - | chr8_3:69654958-69654977 | Msa1305850:intron | 25.0% |
| !! | AAGAATTGTCATTTCCTAAA+GGG | - | chr8_3:69655536-69655555 | Msa1305850:intron | 25.0% |
| ! | AGTTTAGTTAATTTCCCTTT+AGG | + | chr8_3:69655553-69655572 | None:intergenic | 25.0% |
| ! | TACAAACCTTATGTCATATT+TGG | + | chr8_3:69655724-69655743 | None:intergenic | 25.0% |
| ! | ATGACATAAGGTTTGTATAA+AGG | - | chr8_3:69655727-69655746 | Msa1305850:CDS | 25.0% |
| ! | CATTGTTACATAACTGTTTA+AGG | - | chr8_3:69655863-69655882 | Msa1305850:intron | 25.0% |
| !! | CAAGATTAGTTGAGAAATTA+GGG | + | chr8_3:69655996-69656015 | None:intergenic | 25.0% |
| !! | TCAAGATTAGTTGAGAAATT+AGG | + | chr8_3:69655997-69656016 | None:intergenic | 25.0% |
| ! | ATTGAATCGATCTTAGTTTA+GGG | + | chr8_3:69656071-69656090 | None:intergenic | 25.0% |
| ! | AATTGAATCGATCTTAGTTT+AGG | + | chr8_3:69656072-69656091 | None:intergenic | 25.0% |
| ! | AGCTAAACATCTAAAGATTT+GGG | + | chr8_3:69656213-69656232 | None:intergenic | 25.0% |
| ! | TAGCTAAACATCTAAAGATT+TGG | + | chr8_3:69656214-69656233 | None:intergenic | 25.0% |
| ! | TTTAGATGTTTAGCTATTCT+TGG | - | chr8_3:69656218-69656237 | Msa1305850:CDS | 25.0% |
| ! | ATAGATTTCTTGTGGTTTAA+AGG | + | chr8_3:69656343-69656362 | None:intergenic | 25.0% |
| ! | GAAAAATAAGATAATGCATC+AGG | + | chr8_3:69656522-69656541 | None:intergenic | 25.0% |
| ! | TTTGAAGACAAGTTAAGTTA+GGG | + | chr8_3:69656602-69656621 | None:intergenic | 25.0% |
| !!! | TTTTGAAGACAAGTTAAGTT+AGG | + | chr8_3:69656603-69656622 | None:intergenic | 25.0% |
| !!! | TAGGTGTTTTGAGTTTTTTA+TGG | + | chr8_3:69656700-69656719 | None:intergenic | 25.0% |
| ! | ATGAGAAAAAAATGTGACTA+TGG | + | chr8_3:69657521-69657540 | None:intergenic | 25.0% |
| !!! | TTTGTGATAAATTGATGATG+CGG | + | chr8_3:69657605-69657624 | None:intergenic | 25.0% |
| ! | ATTTCTCCTTTTCAATTCAC+CGG | - | chr8_3:69649803-69649822 | Msa1305850:intron | 30.0% |
| !! | GAAATTAGTTCTAGAGATGA+TGG | - | chr8_3:69649952-69649971 | Msa1305850:intron | 30.0% |
| !! | ATGGATTGGTTATGTGTAAA+GGG | - | chr8_3:69649971-69649990 | Msa1305850:intron | 30.0% |
| !!! | GAGGATTTTGATTGTATTTG+AGG | - | chr8_3:69649993-69650012 | Msa1305850:intron | 30.0% |
| TTTGAGGATTACATTCGAAT+TGG | - | chr8_3:69650009-69650028 | Msa1305850:intron | 30.0% | |
| TTGAGGATTACATTCGAATT+GGG | - | chr8_3:69650010-69650029 | Msa1305850:intron | 30.0% | |
| TAACAAGGTTCAAAACTCAT+GGG | - | chr8_3:69650037-69650056 | Msa1305850:intron | 30.0% | |
| TCTGTTTGTGCATATATTAC+AGG | - | chr8_3:69650095-69650114 | Msa1305850:intron | 30.0% | |
| CTGTTTGTGCATATATTACA+GGG | - | chr8_3:69650096-69650115 | Msa1305850:intron | 30.0% | |
| TGTTTGTGCATATATTACAG+GGG | - | chr8_3:69650097-69650116 | Msa1305850:intron | 30.0% | |
| TAAAATTCACCTATGTGATG+TGG | - | chr8_3:69650238-69650257 | Msa1305850:intron | 30.0% | |
| AAAATTCACCTATGTGATGT+GGG | - | chr8_3:69650239-69650258 | Msa1305850:intron | 30.0% | |
| AAATAATGAATGATGAGACG+AGG | + | chr8_3:69650363-69650382 | None:intergenic | 30.0% | |
| ATTTCTATGGTAATAGCACA+TGG | - | chr8_3:69650497-69650516 | Msa1305850:intron | 30.0% | |
| TTTCTATGGTAATAGCACAT+GGG | - | chr8_3:69650498-69650517 | Msa1305850:intron | 30.0% | |
| CATGGGTAAAAATATATCGT+TGG | - | chr8_3:69650515-69650534 | Msa1305850:intron | 30.0% | |
| AAAACAAACATCGTTCCAAA+AGG | + | chr8_3:69650559-69650578 | None:intergenic | 30.0% | |
| !!! | TGTTTTAGAATTATGTGGGT+AGG | - | chr8_3:69650573-69650592 | Msa1305850:intron | 30.0% |
| !! | ATATTCATTTTGATGCGCAT+TGG | - | chr8_3:69650596-69650615 | Msa1305850:intron | 30.0% |
| ! | CATGATGGAAATTATTTCTC+TGG | + | chr8_3:69650737-69650756 | None:intergenic | 30.0% |
| ATGAAGATTATCCACTTGAA+AGG | - | chr8_3:69650835-69650854 | Msa1305850:intron | 30.0% | |
| TGAAGATTATCCACTTGAAA+GGG | - | chr8_3:69650836-69650855 | Msa1305850:intron | 30.0% | |
| ATTGAAAACTATAGTGATCG+AGG | - | chr8_3:69650975-69650994 | Msa1305850:intron | 30.0% | |
| CATCATATGCATAATCATCA+CGG | + | chr8_3:69651034-69651053 | None:intergenic | 30.0% | |
| GATTCTGATTATGATAGAGA+TGG | - | chr8_3:69651137-69651156 | Msa1305850:intron | 30.0% | |
| ATGATGATCATCCAAAATCT+AGG | - | chr8_3:69651342-69651361 | Msa1305850:intron | 30.0% | |
| CCTAAAAAAATAGCTTTCTC+AGG | + | chr8_3:69651548-69651567 | None:intergenic | 30.0% | |
| !!! | CCTGAGAAAGCTATTTTTTT+AGG | - | chr8_3:69651545-69651564 | Msa1305850:intron | 30.0% |
| ! | GATTTGGTATAGATCTTCTT+CGG | + | chr8_3:69651616-69651635 | None:intergenic | 30.0% |
| CAAATTAAGTAGCACATACA+AGG | + | chr8_3:69651638-69651657 | None:intergenic | 30.0% | |
| GTTATAAAAGAGAGAAGTTC+TGG | - | chr8_3:69651756-69651775 | Msa1305850:intron | 30.0% | |
| !!! | ATTTATTGATTTTCCTTCCG+TGG | - | chr8_3:69651797-69651816 | Msa1305850:intron | 30.0% |
| ! | CTTGCATCAATTTTGCATTT+CGG | - | chr8_3:69652250-69652269 | Msa1305850:intron | 30.0% |
| GCTAATTAATCCAAAGCAAT+AGG | + | chr8_3:69652306-69652325 | None:intergenic | 30.0% | |
| TAGCATGTCTAAATTAGTTG+GGG | - | chr8_3:69652322-69652341 | Msa1305850:intron | 30.0% | |
| CTTATCAATACACATGTACA+TGG | + | chr8_3:69652384-69652403 | None:intergenic | 30.0% | |
| !!! | GTTCCATTTTGTTTTCTCAT+CGG | - | chr8_3:69652408-69652427 | Msa1305850:intron | 30.0% |
| ATGCCTGTATTATCAATTAC+AGG | - | chr8_3:69652774-69652793 | Msa1305850:intron | 30.0% | |
| ! | GATCCTGTAATTGATAATAC+AGG | + | chr8_3:69652780-69652799 | None:intergenic | 30.0% |
| TCATGTCATTGTGTAGTTAA+AGG | - | chr8_3:69652939-69652958 | Msa1305850:intron | 30.0% | |
| TCATTGTGTAGTTAAAGGAA+GGG | - | chr8_3:69652944-69652963 | Msa1305850:intron | 30.0% | |
| AGGGCATGTATTAAATCATT+TGG | - | chr8_3:69652963-69652982 | Msa1305850:intron | 30.0% | |
| !!! | ATTCGTACTTTTAGTTTTGG+TGG | - | chr8_3:69653047-69653066 | Msa1305850:intron | 30.0% |
| GATATTACTGATGTATTCGA+TGG | - | chr8_3:69653069-69653088 | Msa1305850:intron | 30.0% | |
| CATTATCTAAACAGCGAAAT+TGG | + | chr8_3:69653130-69653149 | None:intergenic | 30.0% | |
| !!! | CTGTTTCACTTTTTTGTCTA+AGG | - | chr8_3:69653244-69653263 | Msa1305850:intron | 30.0% |
| ! | TTTGTCTAAGGTTTCTTCAT+TGG | - | chr8_3:69653256-69653275 | Msa1305850:intron | 30.0% |
| !!! | ATATACCCATTTTTAGGTAG+AGG | - | chr8_3:69653292-69653311 | Msa1305850:intron | 30.0% |
| ! | ATTTGTTAAGTCAAGAGCTT+TGG | + | chr8_3:69653324-69653343 | None:intergenic | 30.0% |
| AAAGCTCTTGACTTAACAAA+TGG | - | chr8_3:69653323-69653342 | Msa1305850:intron | 30.0% | |
| TCTTGACTTAACAAATGGAA+CGG | - | chr8_3:69653328-69653347 | Msa1305850:intron | 30.0% | |
| AAAAGAATAGAACACCTGTT+GGG | + | chr8_3:69653483-69653502 | None:intergenic | 30.0% | |
| AAAAAGAATAGAACACCTGT+TGG | + | chr8_3:69653484-69653503 | None:intergenic | 30.0% | |
| GAAACCAAATCCCTATTTAT+AGG | - | chr8_3:69653601-69653620 | Msa1305850:intron | 30.0% | |
| TATCCCTATAAATAGGGATT+TGG | + | chr8_3:69653608-69653627 | None:intergenic | 30.0% | |
| GTTTGTGTATCCCTATAAAT+AGG | + | chr8_3:69653615-69653634 | None:intergenic | 30.0% | |
| ! | CTAGGATTTGTTCTTGATTT+AGG | + | chr8_3:69653643-69653662 | None:intergenic | 30.0% |
| TGACCCTTATTATTATTGCT+AGG | + | chr8_3:69653661-69653680 | None:intergenic | 30.0% | |
| AAGAAATACAAGACATTGGA+AGG | - | chr8_3:69653765-69653784 | Msa1305850:intron | 30.0% | |
| AATAAAAAATCCCCCTCATT+TGG | - | chr8_3:69653819-69653838 | Msa1305850:intron | 30.0% | |
| ATAAAAAATCCCCCTCATTT+GGG | - | chr8_3:69653820-69653839 | Msa1305850:intron | 30.0% | |
| GGGAACTCAAAAATTGTATT+GGG | - | chr8_3:69653842-69653861 | Msa1305850:intron | 30.0% | |
| GGAACTCAAAAATTGTATTG+GGG | - | chr8_3:69653843-69653862 | Msa1305850:intron | 30.0% | |
| GAACTCAAAAATTGTATTGG+GGG | - | chr8_3:69653844-69653863 | Msa1305850:intron | 30.0% | |
| ! | CCAAAAGGGAAATTTTATCT+TGG | + | chr8_3:69654186-69654205 | None:intergenic | 30.0% |
| ! | CCAAGATAAAATTTCCCTTT+TGG | - | chr8_3:69654183-69654202 | Msa1305850:intron | 30.0% |
| CATAACTGAAAAAAGAGATG+AGG | - | chr8_3:69654774-69654793 | Msa1305850:intron | 30.0% | |
| TTAGGAAATGACAATTCTTG+TGG | + | chr8_3:69655535-69655554 | None:intergenic | 30.0% | |
| ! | CAAGAATTGTCATTTCCTAA+AGG | - | chr8_3:69655535-69655554 | Msa1305850:intron | 30.0% |
| GGAGAATCTAAAAGATTGTT+TGG | - | chr8_3:69655594-69655613 | Msa1305850:CDS | 30.0% | |
| AATCAAACAAAGAGATAGAG+AGG | + | chr8_3:69655686-69655705 | None:intergenic | 30.0% | |
| CATAAGGTTTGTATAAAGGA+TGG | - | chr8_3:69655731-69655750 | Msa1305850:CDS | 30.0% | |
| ! | TCTGAAGTCAATTACATATG+CGG | + | chr8_3:69655832-69655851 | None:intergenic | 30.0% |
| ATTAGGGATTCTTAGTATGA+TGG | + | chr8_3:69655980-69655999 | None:intergenic | 30.0% | |
| CATACTTGAGAACAATCAAA+AGG | - | chr8_3:69656272-69656291 | Msa1305850:CDS | 30.0% | |
| GGGAATAAAGACTCTTAAAT+TGG | - | chr8_3:69656377-69656396 | Msa1305850:CDS | 30.0% | |
| AAAACACCTATGTAGTTATC+TGG | - | chr8_3:69656710-69656729 | Msa1305850:intron | 30.0% | |
| GTTATTTATCTTGCAAGAGA+GGG | + | chr8_3:69656961-69656980 | None:intergenic | 30.0% | |
| TCCTCATTATCTTAATGGTA+GGG | + | chr8_3:69656990-69657009 | None:intergenic | 30.0% | |
| TTCCTCATTATCTTAATGGT+AGG | + | chr8_3:69656991-69657010 | None:intergenic | 30.0% | |
| AAATTTGGCAGACAAGAAAA+TGG | - | chr8_3:69657009-69657028 | Msa1305850:intron | 30.0% | |
| ATATTATATGTGGGGTTCAA+TGG | + | chr8_3:69657070-69657089 | None:intergenic | 30.0% | |
| ! | ATGATGAACTATGCATGTTT+TGG | + | chr8_3:69657147-69657166 | None:intergenic | 30.0% |
| AATCTCATATACATCACCAA+AGG | - | chr8_3:69657221-69657240 | Msa1305850:five_prime_UTR | 30.0% | |
| ATCTCATATACATCACCAAA+GGG | - | chr8_3:69657222-69657241 | Msa1305850:intron | 30.0% | |
| AATCTCAAATCATCTTCACA+AGG | - | chr8_3:69657566-69657585 | Msa1305850:intron | 30.0% | |
| CTAATTATGTGATTTGACGA+TGG | + | chr8_3:69657654-69657673 | None:intergenic | 30.0% | |
| CAAATCACATAATTAGCACA+TGG | - | chr8_3:69657658-69657677 | Msa1305850:five_prime_UTR | 30.0% | |
| AAATCGCGATTGAAGATCTA+GGG | + | chr8_3:69649743-69649762 | None:intergenic | 35.0% | |
| AAAATCGCGATTGAAGATCT+AGG | + | chr8_3:69649744-69649763 | None:intergenic | 35.0% | |
| ! | TAGATCTTCAATCGCGATTT+TGG | - | chr8_3:69649743-69649762 | Msa1305850:CDS | 35.0% |
| TTTGGACACAGCATAATCAT+CGG | - | chr8_3:69649761-69649780 | Msa1305850:CDS | 35.0% | |
| AAGGAGAAATGCAAGAGTAA+GGG | + | chr8_3:69649793-69649812 | None:intergenic | 35.0% | |
| AAAGGAGAAATGCAAGAGTA+AGG | + | chr8_3:69649794-69649813 | None:intergenic | 35.0% | |
| GAAAATCCGGTGAATTGAAA+AGG | + | chr8_3:69649812-69649831 | None:intergenic | 35.0% | |
| TGAATTGGCATGTGAAAATC+CGG | + | chr8_3:69649825-69649844 | None:intergenic | 35.0% | |
| !! | TAGTTCTAGAGATGATGGAT+TGG | - | chr8_3:69649957-69649976 | Msa1305850:intron | 35.0% |
| !! | GATGGATTGGTTATGTGTAA+AGG | - | chr8_3:69649970-69649989 | Msa1305850:intron | 35.0% |
| CTAACAAGGTTCAAAACTCA+TGG | - | chr8_3:69650036-69650055 | Msa1305850:intron | 35.0% | |
| TCAAAACTCATGGGAGTTAT+TGG | - | chr8_3:69650046-69650065 | Msa1305850:intron | 35.0% | |
| GGATAATAACAGCGTAATTG+TGG | - | chr8_3:69650199-69650218 | Msa1305850:intron | 35.0% | |
| AAATTCACCTATGTGATGTG+GGG | - | chr8_3:69650240-69650259 | Msa1305850:intron | 35.0% | |
| ACTTATTCTCTTGAATCCAC+AGG | - | chr8_3:69650395-69650414 | Msa1305850:intron | 35.0% | |
| ! | ATTAAGATGCACCTTCCTTT+TGG | - | chr8_3:69650541-69650560 | Msa1305850:intron | 35.0% |
| ! | TTCCATCATGATGCTTTAGA+TGG | - | chr8_3:69650747-69650766 | Msa1305850:intron | 35.0% |
| ! | TCCATCATGATGCTTTAGAT+GGG | - | chr8_3:69650748-69650767 | Msa1305850:intron | 35.0% |
| TGGTTGTATGGTTCATGATA+AGG | + | chr8_3:69650882-69650901 | None:intergenic | 35.0% | |
| TCATGAACCATACAACCAAA+TGG | - | chr8_3:69650884-69650903 | Msa1305850:intron | 35.0% | |
| AAACCATCCATTTGGTTGTA+TGG | + | chr8_3:69650894-69650913 | None:intergenic | 35.0% | |
| ! | ACAACCAAATGGATGGTTTT+AGG | - | chr8_3:69650895-69650914 | Msa1305850:intron | 35.0% |
| !! | CAACCAAATGGATGGTTTTA+GGG | - | chr8_3:69650896-69650915 | Msa1305850:intron | 35.0% |
| !!! | AAATGGATGGTTTTAGGGAT+CGG | - | chr8_3:69650901-69650920 | Msa1305850:intron | 35.0% |
| TCTCGAAACTTATCATACTC+CGG | + | chr8_3:69650942-69650961 | None:intergenic | 35.0% | |
| GAGTATGATAAGTTTCGAGA+TGG | - | chr8_3:69650942-69650961 | Msa1305850:intron | 35.0% | |
| CATGAGAAGGATTATGATCA+TGG | - | chr8_3:69651101-69651120 | Msa1305850:intron | 35.0% | |
| AGAAGGATTATGATCATGGT+CGG | - | chr8_3:69651105-69651124 | Msa1305850:intron | 35.0% | |
| AAAAAGATCCAAGTCTGCAT+AGG | - | chr8_3:69651231-69651250 | Msa1305850:intron | 35.0% | |
| ACCATGATGATAAACATCAG+AGG | - | chr8_3:69651450-69651469 | Msa1305850:intron | 35.0% | |
| CCATGATGATAAACATCAGA+GGG | - | chr8_3:69651451-69651470 | Msa1305850:intron | 35.0% | |
| ATTCTGTGGTATGTGTTGAA+TGG | - | chr8_3:69651480-69651499 | Msa1305850:intron | 35.0% | |
| ! | GAATGGCGTTATTCCTTTTT+AGG | - | chr8_3:69651497-69651516 | Msa1305850:intron | 35.0% |
| AAGTAGCACATACAAGGATT+TGG | + | chr8_3:69651632-69651651 | None:intergenic | 35.0% | |
| TTATATTTGTGTAGGCGGAA+TGG | - | chr8_3:69651712-69651731 | Msa1305850:intron | 35.0% | |
| TATATTTGTGTAGGCGGAAT+GGG | - | chr8_3:69651713-69651732 | Msa1305850:intron | 35.0% | |
| TATAACACGAACATGACGAA+GGG | + | chr8_3:69651742-69651761 | None:intergenic | 35.0% | |
| TTATAACACGAACATGACGA+AGG | + | chr8_3:69651743-69651762 | None:intergenic | 35.0% | |
| AAAAGGATTAATACCACGGA+AGG | + | chr8_3:69651813-69651832 | None:intergenic | 35.0% | |
| !! | CAAGTAATGATGGACAAACT+CGG | - | chr8_3:69651905-69651924 | Msa1305850:intron | 35.0% |
| TACAGTTCACTTGAAAGAAC+AGG | + | chr8_3:69652047-69652066 | None:intergenic | 35.0% | |
| GCATTACAATACCATCTGAT+TGG | - | chr8_3:69652160-69652179 | Msa1305850:intron | 35.0% | |
| AATAATATGGACCTGATAGC+AGG | + | chr8_3:69652229-69652248 | None:intergenic | 35.0% | |
| TTTCTTCATGCCTATTGCTT+TGG | - | chr8_3:69652293-69652312 | Msa1305850:intron | 35.0% | |
| AGCATGTCTAAATTAGTTGG+GGG | - | chr8_3:69652323-69652342 | Msa1305850:intron | 35.0% | |
| GATAATGAAATATCTGCTGC+AGG | + | chr8_3:69652466-69652485 | None:intergenic | 35.0% | |
| TCAACATCCTTAGGAAAGAA+AGG | - | chr8_3:69652490-69652509 | Msa1305850:intron | 35.0% | |
| CTCTAAACCTTTCTTTCCTA+AGG | + | chr8_3:69652500-69652519 | None:intergenic | 35.0% | |
| CTTAGGAAAGAAAGGTTTAG+AGG | - | chr8_3:69652498-69652517 | Msa1305850:intron | 35.0% | |
| ! | ATTTATCCTTTTACTCGGAG+TGG | - | chr8_3:69652712-69652731 | Msa1305850:intron | 35.0% |
| ! | TTTATCCTTTTACTCGGAGT+GGG | - | chr8_3:69652713-69652732 | Msa1305850:intron | 35.0% |
| CTAAAGGATCATTAGGCATA+AGG | + | chr8_3:69652877-69652896 | None:intergenic | 35.0% | |
| AACTACACAATGACATGAAG+CGG | + | chr8_3:69652937-69652956 | None:intergenic | 35.0% | |
| GTCATTGTGTAGTTAAAGGA+AGG | - | chr8_3:69652943-69652962 | Msa1305850:intron | 35.0% | |
| AGCATCCTCTACCTAAAAAT+GGG | + | chr8_3:69653300-69653319 | None:intergenic | 35.0% | |
| TAGCATCCTCTACCTAAAAA+TGG | + | chr8_3:69653301-69653320 | None:intergenic | 35.0% | |
| ! | AGCATATGCAAAAAGCATAC+TGG | - | chr8_3:69653382-69653401 | Msa1305850:intron | 35.0% |
| ! | GCATATGCAAAAAGCATACT+GGG | - | chr8_3:69653383-69653402 | Msa1305850:intron | 35.0% |
| ! | CATATGCAAAAAGCATACTG+GGG | - | chr8_3:69653384-69653403 | Msa1305850:intron | 35.0% |
| !!! | GAGAGTTTTGGAAAAAAGGA+AGG | - | chr8_3:69653733-69653752 | Msa1305850:intron | 35.0% |
| GTGGAAGAAATACAAGACAT+TGG | - | chr8_3:69653761-69653780 | Msa1305850:intron | 35.0% | |
| TAAAAAATCCCCCTCATTTG+GGG | - | chr8_3:69653821-69653840 | Msa1305850:intron | 35.0% | |
| GGGGAACTCAAAAATTGTAT+TGG | - | chr8_3:69653841-69653860 | Msa1305850:intron | 35.0% | |
| TCAAAAATTGTATTGGGGGA+GGG | - | chr8_3:69653848-69653867 | Msa1305850:intron | 35.0% | |
| ! | GGGAAATTTTATCTTGGGAA+TGG | + | chr8_3:69654180-69654199 | None:intergenic | 35.0% |
| ! | ACTTGTTACGAAGTCCAAAA+GGG | + | chr8_3:69654200-69654219 | None:intergenic | 35.0% |
| !! | GTATCTTTGGAGTATGTCAT+AGG | + | chr8_3:69654283-69654302 | None:intergenic | 35.0% |
| ACTGATCTACAAGAATCACA+AGG | + | chr8_3:69654461-69654480 | None:intergenic | 35.0% | |
| AAGAATCACAAGGGACAATA+TGG | + | chr8_3:69654499-69654518 | None:intergenic | 35.0% | |
| CTGATCTACAAGAATCACAA+GGG | + | chr8_3:69654460-69654479 | None:intergenic | 35.0% | |
| ACTGATCTACAAGAATCACA+AGG | + | chr8_3:69654461-69654480 | None:intergenic | 35.0% | |
| TTTGTGCTAATTTCCTGACT+TGG | - | chr8_3:69654532-69654551 | Msa1305850:CDS | 35.0% | |
| TAATAACTAGTGCAATCTGG+TGG | - | chr8_3:69654572-69654591 | Msa1305850:intron | 35.0% | |
| CAATCTGGTGGAAAATAGTT+GGG | - | chr8_3:69654584-69654603 | Msa1305850:intron | 35.0% | |
| GGGCCTAGTGTATATTATTA+CGG | - | chr8_3:69654891-69654910 | Msa1305850:CDS | 35.0% | |
| AATAAGTGTCCTGGACAATT+GGG | + | chr8_3:69654917-69654936 | None:intergenic | 35.0% | |
| TGCATAAACAATAAGTGTCC+TGG | + | chr8_3:69654926-69654945 | None:intergenic | 35.0% | |
| ! | CCAGACTTTTCATATTAGTG+TGG | + | chr8_3:69655246-69655265 | None:intergenic | 35.0% |
| CCACACTAATATGAAAAGTC+TGG | - | chr8_3:69655243-69655262 | Msa1305850:intron | 35.0% | |
| TGCCAACATGATGATAGATT+TGG | - | chr8_3:69655462-69655481 | Msa1305850:intron | 35.0% | |
| TGCCAAATCTATCATCATGT+TGG | + | chr8_3:69655467-69655486 | None:intergenic | 35.0% | |
| TAAAGGATGGTTAACCACAT+TGG | - | chr8_3:69655744-69655763 | Msa1305850:CDS | 35.0% | |
| AAAGGATGGTTAACCACATT+GGG | - | chr8_3:69655745-69655764 | Msa1305850:CDS | 35.0% | |
| TGGAGAATACAACATTTGGA+GGG | + | chr8_3:69655785-69655804 | None:intergenic | 35.0% | |
| ATGGAGAATACAACATTTGG+AGG | + | chr8_3:69655786-69655805 | None:intergenic | 35.0% | |
| GGTATGGAGAATACAACATT+TGG | + | chr8_3:69655789-69655808 | None:intergenic | 35.0% | |
| GCTATAAGTCCAAGGTATAT+CGG | + | chr8_3:69655810-69655829 | None:intergenic | 35.0% | |
| AGAATTCCATATTGCTCTCA+TGG | - | chr8_3:69655917-69655936 | Msa1305850:CDS | 35.0% | |
| ACTTGAGAACAATCAAAAGG+AGG | - | chr8_3:69656275-69656294 | Msa1305850:CDS | 35.0% | |
| TTCTTGTGGTTTAAAGGCAA+AGG | + | chr8_3:69656337-69656356 | None:intergenic | 35.0% | |
| ! | TTTTCACATTGTGTTTGCCT+TGG | - | chr8_3:69656403-69656422 | Msa1305850:CDS | 35.0% |
| TTTCACATTGTGTTTGCCTT+GGG | - | chr8_3:69656404-69656423 | Msa1305850:CDS | 35.0% | |
| AACACACCACATGGAATTTA+GGG | + | chr8_3:69656653-69656672 | None:intergenic | 35.0% | |
| AAACACACCACATGGAATTT+AGG | + | chr8_3:69656654-69656673 | None:intergenic | 35.0% | |
| ACCTATGTAGTTATCTGGTT+AGG | - | chr8_3:69656715-69656734 | Msa1305850:intron | 35.0% | |
| CCTATGTAGTTATCTGGTTA+GGG | - | chr8_3:69656716-69656735 | Msa1305850:intron | 35.0% | |
| TGCATTTGAAGACACTATAG+TGG | + | chr8_3:69656805-69656824 | None:intergenic | 35.0% | |
| GCTAAAAATATCATATGCGC+AGG | - | chr8_3:69656847-69656866 | Msa1305850:intron | 35.0% | |
| GGTTATTTATCTTGCAAGAG+AGG | + | chr8_3:69656962-69656981 | None:intergenic | 35.0% | |
| TCATTATCTTAATGGTAGGG+TGG | + | chr8_3:69656987-69657006 | None:intergenic | 35.0% | |
| ACCCTACCATTAAGATAATG+AGG | - | chr8_3:69656986-69657005 | Msa1305850:intron | 35.0% | |
| ATTATGTGATTTGACGATGG+TGG | + | chr8_3:69657651-69657670 | None:intergenic | 35.0% | |
| !! | CGATTGAAGATCTAGGGTTT+TGG | + | chr8_3:69649737-69649756 | None:intergenic | 40.0% |
| ! | GATTGGTTATGTGTAAAGGG+AGG | - | chr8_3:69649974-69649993 | Msa1305850:intron | 40.0% |
| AGGATTACATTCGAATTGGG+AGG | - | chr8_3:69650013-69650032 | Msa1305850:intron | 40.0% | |
| GCATATATTACAGGGGAGAA+AGG | - | chr8_3:69650104-69650123 | Msa1305850:intron | 40.0% | |
| ! | ATTCTGAATCTAGAGCTACC+CGG | - | chr8_3:69650132-69650151 | Msa1305850:intron | 40.0% |
| AATTCACCTATGTGATGTGG+GGG | - | chr8_3:69650241-69650260 | Msa1305850:intron | 40.0% | |
| TGTGGGGGAAAGAAACTATT+AGG | - | chr8_3:69650256-69650275 | Msa1305850:intron | 40.0% | |
| GTGGGGGAAAGAAACTATTA+GGG | - | chr8_3:69650257-69650276 | Msa1305850:intron | 40.0% | |
| AAAGAAAGCTAGCTAACCGT+GGG | - | chr8_3:69650305-69650324 | Msa1305850:intron | 40.0% | |
| TGAATGATGAGACGAGGTTT+AGG | + | chr8_3:69650357-69650376 | None:intergenic | 40.0% | |
| AGTTGGACTCACCGAAAATT+TGG | + | chr8_3:69650450-69650469 | None:intergenic | 40.0% | |
| TAGATGATAAGTAGGCAGCA+AGG | + | chr8_3:69650476-69650495 | None:intergenic | 40.0% | |
| CAAACATCGTTCCAAAAGGA+AGG | + | chr8_3:69650555-69650574 | None:intergenic | 40.0% | |
| AAAAAAAGGGGTAAAGTGGG+AGG | + | chr8_3:69650646-69650665 | None:intergenic | 40.0% | |
| !!! | TCCCACTTTACCCCTTTTTT+TGG | - | chr8_3:69650645-69650664 | Msa1305850:intron | 40.0% |
| GCCAAAAAAAGGGGTAAAGT+GGG | + | chr8_3:69650649-69650668 | None:intergenic | 40.0% | |
| TGCCAAAAAAAGGGGTAAAG+TGG | + | chr8_3:69650650-69650669 | None:intergenic | 40.0% | |
| ! | CCATCATGATGCTTTAGATG+GGG | - | chr8_3:69650749-69650768 | Msa1305850:intron | 40.0% |
| GAACCATACAACCAAATGGA+TGG | - | chr8_3:69650888-69650907 | Msa1305850:intron | 40.0% | |
| GATCCCTAAAACCATCCATT+TGG | + | chr8_3:69650902-69650921 | None:intergenic | 40.0% | |
| !!! | AATGGATGGTTTTAGGGATC+GGG | - | chr8_3:69650902-69650921 | Msa1305850:intron | 40.0% |
| CTCGAAACTTATCATACTCC+GGG | + | chr8_3:69650941-69650960 | None:intergenic | 40.0% | |
| GATTATGATAGAGATGGCAG+AGG | - | chr8_3:69651143-69651162 | Msa1305850:intron | 40.0% | |
| ATGGCAGAGGAGATAGTAAT+TGG | - | chr8_3:69651156-69651175 | Msa1305850:intron | 40.0% | |
| GAGACAAGAGATGTCTTAGT+CGG | - | chr8_3:69651207-69651226 | Msa1305850:intron | 40.0% | |
| AGACAAGAGATGTCTTAGTC+GGG | - | chr8_3:69651208-69651227 | Msa1305850:intron | 40.0% | |
| TCATGTTTCCTATGCAGACT+TGG | + | chr8_3:69651242-69651261 | None:intergenic | 40.0% | |
| CTTCGCGATAACTTCTACTA+CGG | + | chr8_3:69651385-69651404 | None:intergenic | 40.0% | |
| TGATAGAAGTGAAAGACGCA+TGG | - | chr8_3:69651427-69651446 | Msa1305850:intron | 40.0% | |
| CCCTCTGATGTTTATCATCA+TGG | + | chr8_3:69651454-69651473 | None:intergenic | 40.0% | |
| TTCACAACAACAGTTGCAGA+TGG | + | chr8_3:69651573-69651592 | None:intergenic | 40.0% | |
| TCTGCAACTGTTGTTGTGAA+AGG | - | chr8_3:69651573-69651592 | Msa1305850:intron | 40.0% | |
| ATATTTGTGTAGGCGGAATG+GGG | - | chr8_3:69651714-69651733 | Msa1305850:intron | 40.0% | |
| ATAACACGAACATGACGAAG+GGG | + | chr8_3:69651741-69651760 | None:intergenic | 40.0% | |
| !!! | GGTGATGGTCTTGTTTTTGA+TGG | - | chr8_3:69651929-69651948 | Msa1305850:intron | 40.0% |
| TCAATGCACATCCAATCAGA+TGG | + | chr8_3:69652174-69652193 | None:intergenic | 40.0% | |
| ! | GCACCGATGAGAAAACAAAA+TGG | + | chr8_3:69652414-69652433 | None:intergenic | 40.0% |
| AGGAAAGAAAGGTTTAGAGG+CGG | - | chr8_3:69652501-69652520 | Msa1305850:intron | 40.0% | |
| ATCAGGTCCAACTCATGTAT+TGG | - | chr8_3:69652589-69652608 | Msa1305850:intron | 40.0% | |
| CGAACAACCAATACATGAGT+TGG | + | chr8_3:69652599-69652618 | None:intergenic | 40.0% | |
| !! | ACTCATGTATTGGTTGTTCG+TGG | - | chr8_3:69652599-69652618 | Msa1305850:intron | 40.0% |
| !! | TGTATTGGTTGTTCGTGGAT+TGG | - | chr8_3:69652604-69652623 | Msa1305850:intron | 40.0% |
| ATTGGATGAAAATGCCGATG+AGG | - | chr8_3:69652622-69652641 | Msa1305850:intron | 40.0% | |
| CATGCTTGGAAAACTCATAG+CGG | + | chr8_3:69652655-69652674 | None:intergenic | 40.0% | |
| ! | TTATCCTTTTACTCGGAGTG+GGG | - | chr8_3:69652714-69652733 | Msa1305850:intron | 40.0% |
| ACTACACAATGACATGAAGC+GGG | + | chr8_3:69652936-69652955 | None:intergenic | 40.0% | |
| AATCTGCCCATTCTTCTCAA+GGG | + | chr8_3:69653354-69653373 | None:intergenic | 40.0% | |
| TCATGCTAACAAGTTCCCTA+AGG | - | chr8_3:69653678-69653697 | Msa1305850:intron | 40.0% | |
| !! | AAGTTCCCTAAGGCTTTGTT+TGG | - | chr8_3:69653688-69653707 | Msa1305850:intron | 40.0% |
| !! | AGTTCCCTAAGGCTTTGTTT+GGG | - | chr8_3:69653689-69653708 | Msa1305850:intron | 40.0% |
| AACTCCCAAACAAAGCCTTA+GGG | + | chr8_3:69653696-69653715 | None:intergenic | 40.0% | |
| AAACTCCCAAACAAAGCCTT+AGG | + | chr8_3:69653697-69653716 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr8_3:69653696-69653715 | Msa1305850:intron | 40.0% |
| !!! | AGCGGAGAGTTTTGGAAAAA+AGG | - | chr8_3:69653729-69653748 | Msa1305850:intron | 40.0% |
| ATACAAGACATTGGAAGGAG+AGG | - | chr8_3:69653770-69653789 | Msa1305850:intron | 40.0% | |
| TACAAGACATTGGAAGGAGA+GGG | - | chr8_3:69653771-69653790 | Msa1305850:intron | 40.0% | |
| AAAAAATCCCCCTCATTTGG+GGG | - | chr8_3:69653822-69653841 | Msa1305850:intron | 40.0% | |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | + | chr8_3:69653834-69653853 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | + | chr8_3:69653835-69653854 | None:intergenic | 40.0% |
| CTCAAAAATTGTATTGGGGG+AGG | - | chr8_3:69653847-69653866 | Msa1305850:intron | 40.0% | |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr8_3:69654072-69654091 | None:intergenic | 40.0% |
| AAACTCCCAAACAAAGCCTA+AGG | - | chr8_3:69654071-69654090 | Msa1305850:intron | 40.0% | |
| AACTCCCAAACAAAGCCTAA+GGG | - | chr8_3:69654072-69654091 | Msa1305850:intron | 40.0% | |
| !! | AGTACCCTTAGGCTTTGTTT+GGG | + | chr8_3:69654079-69654098 | None:intergenic | 40.0% |
| !! | AAGTACCCTTAGGCTTTGTT+TGG | + | chr8_3:69654080-69654099 | None:intergenic | 40.0% |
| ACCTCTTAACAAGTACCCTT+AGG | + | chr8_3:69654090-69654109 | None:intergenic | 40.0% | |
| ! | CACTTGTTACGAAGTCCAAA+AGG | + | chr8_3:69654201-69654220 | None:intergenic | 40.0% |
| ACTTCGTAACAAGTGCACTA+GGG | - | chr8_3:69654206-69654225 | Msa1305850:intron | 40.0% | |
| TTCATGCAAGTTAGCCATGT+TGG | - | chr8_3:69654434-69654453 | Msa1305850:intron | 40.0% | |
| AAGAATCACAAGGACCAACA+TGG | + | chr8_3:69654451-69654470 | None:intergenic | 40.0% | |
| ! | TTTTGTTCGTCAACCAAGTC+AGG | + | chr8_3:69654548-69654567 | None:intergenic | 40.0% |
| GCAATCTGGTGGAAAATAGT+TGG | - | chr8_3:69654583-69654602 | Msa1305850:intron | 40.0% | |
| ACTTGACCATCTCATCTCAT+CGG | + | chr8_3:69654828-69654847 | None:intergenic | 40.0% | |
| GGGCCGTAATAATATACACT+AGG | + | chr8_3:69654897-69654916 | None:intergenic | 40.0% | |
| CAATAAGTGTCCTGGACAAT+TGG | + | chr8_3:69654918-69654937 | None:intergenic | 40.0% | |
| ! | TATTTGGCTTCTACTGTTGC+AGG | + | chr8_3:69655284-69655303 | None:intergenic | 40.0% |
| TCAGATGTTGAACAGCGTTT+AGG | - | chr8_3:69655646-69655665 | Msa1305850:intron | 40.0% | |
| GGAGAATACAACATTTGGAG+GGG | + | chr8_3:69655784-69655803 | None:intergenic | 40.0% | |
| TTCTCCATACCGATATACCT+TGG | - | chr8_3:69655798-69655817 | Msa1305850:intron | 40.0% | |
| AAGTCCAAGGTATATCGGTA+TGG | + | chr8_3:69655805-69655824 | None:intergenic | 40.0% | |
| GAGAACAATCAAAAGGAGGT+TGG | - | chr8_3:69656279-69656298 | Msa1305850:CDS | 40.0% | |
| GAAGGTTAAATGGCATTTCC+AGG | - | chr8_3:69656471-69656490 | Msa1305850:CDS | 40.0% | |
| ATTTCCAGGAAGACAATGTG+TGG | - | chr8_3:69656485-69656504 | Msa1305850:CDS | 40.0% | |
| TTTCCAGGAAGACAATGTGT+GGG | - | chr8_3:69656486-69656505 | Msa1305850:CDS | 40.0% | |
| TTCTTCCTAGACATGCTCTT+AGG | - | chr8_3:69656560-69656579 | Msa1305850:CDS | 40.0% | |
| TAGCTTCCCTAAATTCCATG+TGG | - | chr8_3:69656644-69656663 | Msa1305850:CDS | 40.0% | |
| CAACAAAGAAACACACCACA+TGG | + | chr8_3:69656662-69656681 | None:intergenic | 40.0% | |
| CCCTAACCAGATAACTACAT+AGG | + | chr8_3:69656719-69656738 | None:intergenic | 40.0% | |
| AAGTAGGGGGTTAACTAAGA+TGG | + | chr8_3:69656885-69656904 | None:intergenic | 40.0% | |
| TATCTTAATGGTAGGGTGGA+TGG | + | chr8_3:69656983-69657002 | None:intergenic | 40.0% | |
| CATCACCAAAGGGAAATCAA+TGG | - | chr8_3:69657232-69657251 | Msa1305850:intron | 40.0% | |
| !! | AGGAACCATTGATTTCCCTT+TGG | + | chr8_3:69657240-69657259 | None:intergenic | 40.0% |
| !! | AGATCTAGGGTTTTGGTCTC+TGG | + | chr8_3:69649730-69649749 | None:intergenic | 45.0% |
| TTCGAATTGGGAGGCTAACA+AGG | - | chr8_3:69650022-69650041 | Msa1305850:intron | 45.0% | |
| ! | TTCTGAATCTAGAGCTACCC+GGG | - | chr8_3:69650133-69650152 | Msa1305850:intron | 45.0% |
| TTCTTTCCCCCACATCACAT+AGG | + | chr8_3:69650250-69650269 | None:intergenic | 45.0% | |
| GAAAGAAAGCTAGCTAACCG+TGG | - | chr8_3:69650304-69650323 | Msa1305850:intron | 45.0% | |
| AAGAAAGCTAGCTAACCGTG+GGG | - | chr8_3:69650306-69650325 | Msa1305850:intron | 45.0% | |
| TGAGACGAGGTTTAGGCAAA+TGG | + | chr8_3:69650350-69650369 | None:intergenic | 45.0% | |
| TTGAATCCACAGGCTCTTGA+GGG | - | chr8_3:69650405-69650424 | Msa1305850:intron | 45.0% | |
| ! | CGGTCCATGAGCCAAATTTT+CGG | - | chr8_3:69650436-69650455 | Msa1305850:intron | 45.0% |
| ! | CTCACCGAAAATTTGGCTCA+TGG | + | chr8_3:69650443-69650462 | None:intergenic | 45.0% |
| !!! | ACCCCTTTTTTTGGCAGAGT+CGG | - | chr8_3:69650654-69650673 | Msa1305850:intron | 45.0% |
| ! | ACCGACTCTGCCAAAAAAAG+GGG | + | chr8_3:69650658-69650677 | None:intergenic | 45.0% |
| !! | CACCGACTCTGCCAAAAAAA+GGG | + | chr8_3:69650659-69650678 | None:intergenic | 45.0% |
| GTGGCGCTTATGATGAAAGA+CGG | - | chr8_3:69650676-69650695 | Msa1305850:intron | 45.0% | |
| ! | CCCCATCTAAAGCATCATGA+TGG | + | chr8_3:69650752-69650771 | None:intergenic | 45.0% |
| ! | TCATGATGCTTTAGATGGGG+AGG | - | chr8_3:69650752-69650771 | Msa1305850:intron | 45.0% |
| CGTCTAGATTCCCTTTCAAG+TGG | + | chr8_3:69650849-69650868 | None:intergenic | 45.0% | |
| GCAGAGGAGATAGTAATTGG+AGG | - | chr8_3:69651159-69651178 | Msa1305850:intron | 45.0% | |
| AACGAGAGTGAGAATGGGAA+CGG | + | chr8_3:69651301-69651320 | None:intergenic | 45.0% | |
| ATTTCCACGAGATTGCGAAC+GGG | + | chr8_3:69651324-69651343 | None:intergenic | 45.0% | |
| CATTTCCACGAGATTGCGAA+CGG | + | chr8_3:69651325-69651344 | None:intergenic | 45.0% | |
| !! | TCAGAGGGAGCATTATTCTG+TGG | - | chr8_3:69651466-69651485 | Msa1305850:intron | 45.0% |
| !! | GTAATGATGGACAAACTCGG+AGG | - | chr8_3:69651908-69651927 | Msa1305850:intron | 45.0% |
| TGTTGCAGTAGTAAGCCAAC+TGG | - | chr8_3:69652090-69652109 | Msa1305850:intron | 45.0% | |
| TCAGATGGAGCTATGAAACC+AGG | - | chr8_3:69652123-69652142 | Msa1305850:intron | 45.0% | |
| ATGCTCTTATGACTGTGACC+TGG | + | chr8_3:69652144-69652163 | None:intergenic | 45.0% | |
| ! | GCTACATCAATTTTGCACGC+CGG | - | chr8_3:69652199-69652218 | Msa1305850:intron | 45.0% |
| GGAAAGAAAGGTTTAGAGGC+GGG | - | chr8_3:69652502-69652521 | Msa1305850:intron | 45.0% | |
| ! | ATAGCGGAGCATTTCCTCAT+CGG | + | chr8_3:69652639-69652658 | None:intergenic | 45.0% |
| TTCCAAGCATGCTCCAATCA+AGG | - | chr8_3:69652664-69652683 | Msa1305850:intron | 45.0% | |
| AACCTTGATTGGAGCATGCT+TGG | + | chr8_3:69652669-69652688 | None:intergenic | 45.0% | |
| ! | TATCCTTTTACTCGGAGTGG+GGG | - | chr8_3:69652715-69652734 | Msa1305850:intron | 45.0% |
| AAGTTCACTCACGTCTCAAG+AGG | - | chr8_3:69652817-69652836 | Msa1305850:intron | 45.0% | |
| GAATCTGCCCATTCTTCTCA+AGG | + | chr8_3:69653355-69653374 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGT+GGG | - | chr8_3:69653700-69653719 | Msa1305850:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGTG+GGG | - | chr8_3:69653701-69653720 | Msa1305850:intron | 45.0% |
| GGAAAAAAGGAAGGAGCAAG+TGG | - | chr8_3:69653742-69653761 | Msa1305850:intron | 45.0% | |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | + | chr8_3:69653833-69653852 | None:intergenic | 45.0% |
| ! | ATTGTATTGGGGGAGGGTTT+TGG | - | chr8_3:69653854-69653873 | Msa1305850:intron | 45.0% |
| ! | TTGTATTGGGGGAGGGTTTT+GGG | - | chr8_3:69653855-69653874 | Msa1305850:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr8_3:69654067-69654086 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr8_3:69654068-69654087 | None:intergenic | 45.0% |
| !! | GCCTAAGGGTACTTGTTAAG+AGG | - | chr8_3:69654086-69654105 | Msa1305850:intron | 45.0% |
| ! | GGGTACTTGTTAAGAGGTCA+AGG | - | chr8_3:69654092-69654111 | Msa1305850:intron | 45.0% |
| GACTTCGTAACAAGTGCACT+AGG | - | chr8_3:69654205-69654224 | Msa1305850:intron | 45.0% | |
| ! | CTACCTAGACGTTTTACCTG+AGG | - | chr8_3:69654610-69654629 | Msa1305850:intron | 45.0% |
| CTTCCTCAGGTAAAACGTCT+AGG | + | chr8_3:69654616-69654635 | None:intergenic | 45.0% | |
| ! | CTAGACGTTTTACCTGAGGA+AGG | - | chr8_3:69654614-69654633 | Msa1305850:intron | 45.0% |
| AGAGATGAGGAAGATGAGAG+AGG | - | chr8_3:69654787-69654806 | Msa1305850:intron | 45.0% | |
| CATACACCGATGAGATGAGA+TGG | - | chr8_3:69654819-69654838 | Msa1305850:intron | 45.0% | |
| TTATTACGGCCCAATTGTCC+AGG | - | chr8_3:69654905-69654924 | Msa1305850:intron | 45.0% | |
| TCTACTGTTGCAGGAAAGCA+GGG | + | chr8_3:69655275-69655294 | None:intergenic | 45.0% | |
| TTCTACTGTTGCAGGAAAGC+AGG | + | chr8_3:69655276-69655295 | None:intergenic | 45.0% | |
| CAAGAATCTTAGGCCCAATG+TGG | + | chr8_3:69655761-69655780 | None:intergenic | 45.0% | |
| TTTGGAGGGGCAAGAATCTT+AGG | + | chr8_3:69655771-69655790 | None:intergenic | 45.0% | |
| CATATGCGGCTATAAGTCCA+AGG | + | chr8_3:69655818-69655837 | None:intergenic | 45.0% | |
| TCCATATTGCTCTCATGGCT+AGG | - | chr8_3:69655922-69655941 | Msa1305850:CDS | 45.0% | |
| TCCTAGCCATGAGAGCAATA+TGG | + | chr8_3:69655926-69655945 | None:intergenic | 45.0% | |
| GCGAGAAAAAAGGTAACCCA+AGG | + | chr8_3:69656423-69656442 | None:intergenic | 45.0% | |
| !!! | ACCTTTTTTCTCGCTACAGC+TGG | - | chr8_3:69656429-69656448 | Msa1305850:CDS | 45.0% |
| !!! | CCTTTTTTCTCGCTACAGCT+GGG | - | chr8_3:69656430-69656449 | Msa1305850:CDS | 45.0% |
| !!! | CTTTTTTCTCGCTACAGCTG+GGG | - | chr8_3:69656431-69656450 | Msa1305850:CDS | 45.0% |
| CCATTTAACCTTCGTGCATG+AGG | + | chr8_3:69656464-69656483 | None:intergenic | 45.0% | |
| CCTCATGCACGAAGGTTAAA+TGG | - | chr8_3:69656461-69656480 | Msa1305850:CDS | 45.0% | |
| TTCCAGGAAGACAATGTGTG+GGG | - | chr8_3:69656487-69656506 | Msa1305850:CDS | 45.0% | |
| TAGACATGCTCTTAGGACCT+GGG | - | chr8_3:69656567-69656586 | Msa1305850:CDS | 45.0% | |
| AGTTAGGGAAATTCTACCCC+AGG | + | chr8_3:69656587-69656606 | None:intergenic | 45.0% | |
| CAGAAGATGTCTCAAGTAGG+GGG | + | chr8_3:69656898-69656917 | None:intergenic | 45.0% | |
| GCAGAAGATGTCTCAAGTAG+GGG | + | chr8_3:69656899-69656918 | None:intergenic | 45.0% | |
| GGCAGAAGATGTCTCAAGTA+GGG | + | chr8_3:69656900-69656919 | None:intergenic | 45.0% | |
| TGGCAGAAGATGTCTCAAGT+AGG | + | chr8_3:69656901-69656920 | None:intergenic | 45.0% | |
| TATCTTGCAAGAGAGGGATG+AGG | + | chr8_3:69656955-69656974 | None:intergenic | 45.0% | |
| ! | GGAGCTCTGATTAGGATGTT+GGG | + | chr8_3:69657294-69657313 | None:intergenic | 45.0% |
| ! | TGGAGCTCTGATTAGGATGT+TGG | + | chr8_3:69657295-69657314 | None:intergenic | 45.0% |
| ! | TGTCTAGTGGAGCTCTGATT+AGG | + | chr8_3:69657302-69657321 | None:intergenic | 45.0% |
| TCCGAGAACAAAGCGGTAAA+AGG | - | chr8_3:69657326-69657345 | Msa1305850:intron | 45.0% | |
| !! | GCCTTTTACCGCTTTGTTCT+CGG | + | chr8_3:69657330-69657349 | None:intergenic | 45.0% |
| TTTGGTCTCCTACATCCTCA+TGG | + | chr8_3:69657391-69657410 | None:intergenic | 45.0% | |
| ACATGTATCTCACCCTCCAA+TGG | + | chr8_3:69657417-69657436 | None:intergenic | 45.0% | |
| !! | TATAAAATTAAAAATGATAA+TGG | + | chr8_3:69655076-69655095 | None:intergenic | 5.0% |
| !!! | AATCTATATAAATTATTTTT+CGG | - | chr8_3:69656356-69656375 | Msa1305850:CDS | 5.0% |
| !! | ATTTATTAAATATTATATGT+GGG | + | chr8_3:69657079-69657098 | None:intergenic | 5.0% |
| ! | TCTGAATCTAGAGCTACCCG+GGG | - | chr8_3:69650134-69650153 | Msa1305850:intron | 50.0% |
| CTATGCACTGCATCAAGGCT+GGG | - | chr8_3:69650178-69650197 | Msa1305850:intron | 50.0% | |
| AGAAAGCTAGCTAACCGTGG+GGG | - | chr8_3:69650307-69650326 | Msa1305850:intron | 50.0% | |
| CTTGAATCCACAGGCTCTTG+AGG | - | chr8_3:69650404-69650423 | Msa1305850:intron | 50.0% | |
| AGTAGGCAGCAAGGAACAGT+TGG | + | chr8_3:69650467-69650486 | None:intergenic | 50.0% | |
| AAAGGGGTAAAGTGGGAGGA+AGG | + | chr8_3:69650642-69650661 | None:intergenic | 50.0% | |
| !! | CCACCGACTCTGCCAAAAAA+AGG | + | chr8_3:69650660-69650679 | None:intergenic | 50.0% |
| !!! | CCTTTTTTTGGCAGAGTCGG+TGG | - | chr8_3:69650657-69650676 | Msa1305850:intron | 50.0% |
| CTCTGGTAAACAGCATCCCT+TGG | + | chr8_3:69650720-69650739 | None:intergenic | 50.0% | |
| GCCAGTGGAGTCAATCCAAA+CGG | - | chr8_3:69650802-69650821 | Msa1305850:intron | 50.0% | |
| ! | TCCGTTTGGATTGACTCCAC+TGG | + | chr8_3:69650806-69650825 | None:intergenic | 50.0% |
| AGTGGAGTCAATCCAAACGG+AGG | - | chr8_3:69650805-69650824 | Msa1305850:intron | 50.0% | |
| GTGGAGTCAATCCAAACGGA+GGG | - | chr8_3:69650806-69650825 | Msa1305850:intron | 50.0% | |
| TGGAGTCAATCCAAACGGAG+GGG | - | chr8_3:69650807-69650826 | Msa1305850:intron | 50.0% | |
| TTCATCGTAACCCCTCCGTT+TGG | + | chr8_3:69650820-69650839 | None:intergenic | 50.0% | |
| TCGGGAGATTGACATGTACC+CGG | - | chr8_3:69650920-69650939 | Msa1305850:intron | 50.0% | |
| ACAAACCTGCCAGGTTTGCA+GGG | - | chr8_3:69651003-69651022 | Msa1305850:intron | 50.0% | |
| AGTCCCGTGTTTCCCATCAT+CGG | - | chr8_3:69651066-69651085 | Msa1305850:intron | 50.0% | |
| ACTATCCTCCCTCCGATGAT+GGG | + | chr8_3:69651081-69651100 | None:intergenic | 50.0% | |
| GAGGGAGGATAGTCATGAGA+AGG | - | chr8_3:69651088-69651107 | Msa1305850:intron | 50.0% | |
| ACGAGAGTGAGAATGGGAAC+GGG | + | chr8_3:69651300-69651319 | None:intergenic | 50.0% | |
| ACGGGAACGAGAGTGAGAAT+GGG | + | chr8_3:69651306-69651325 | None:intergenic | 50.0% | |
| AACGGGAACGAGAGTGAGAA+TGG | + | chr8_3:69651307-69651326 | None:intergenic | 50.0% | |
| ! | CCTCGAGGAGACCTAGATTT+TGG | + | chr8_3:69651356-69651375 | None:intergenic | 50.0% |
| CCAAAATCTAGGTCTCCTCG+AGG | - | chr8_3:69651353-69651372 | Msa1305850:intron | 50.0% | |
| ! | AGAAGTTCTGGCATCTCTCG+TGG | - | chr8_3:69651768-69651787 | Msa1305850:intron | 50.0% |
| GGGAGCTGCACAAGTAATGA+TGG | - | chr8_3:69651895-69651914 | Msa1305850:intron | 50.0% | |
| ATGGACAAACTCGGAGGTGA+TGG | - | chr8_3:69651914-69651933 | Msa1305850:intron | 50.0% | |
| TGCAGTAGTAAGCCAACTGG+AGG | - | chr8_3:69652093-69652112 | Msa1305850:intron | 50.0% | |
| TAGTAAGCCAACTGGAGGTG+CGG | - | chr8_3:69652098-69652117 | Msa1305850:intron | 50.0% | |
| TGTTGCCAGACGAAGTCCTT+TGG | - | chr8_3:69653209-69653228 | Msa1305850:intron | 50.0% | |
| CACTTCCAAAGGACTTCGTC+TGG | + | chr8_3:69653217-69653236 | None:intergenic | 50.0% | |
| !! | ACAGAGCGTGTCACTTCCAA+AGG | + | chr8_3:69653228-69653247 | None:intergenic | 50.0% |
| GAACGGCCCTTGAGAAGAAT+GGG | - | chr8_3:69653345-69653364 | Msa1305850:intron | 50.0% | |
| TCTTGCAGCTGCAGCTATTG+AGG | - | chr8_3:69653445-69653464 | Msa1305850:intron | 50.0% | |
| ! | GGCTGCAACATTTTCCCAAC+AGG | - | chr8_3:69653466-69653485 | Msa1305850:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+TGG | - | chr8_3:69653699-69653718 | Msa1305850:intron | 50.0% |
| ACATTGGAAGGAGAGGGCTT+TGG | - | chr8_3:69653777-69653796 | Msa1305850:intron | 50.0% | |
| TTGAGTTCCCCCAAATGAGG+GGG | + | chr8_3:69653832-69653851 | None:intergenic | 50.0% | |
| ! | TGTATTGGGGGAGGGTTTTG+GGG | - | chr8_3:69653856-69653875 | Msa1305850:intron | 50.0% |
| TTTGGGAGTTTGGAGGGGAA+TGG | + | chr8_3:69654062-69654081 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr8_3:69653699-69653718 | None:intergenic | 50.0% |
| GTCTTCACAATGCCTTCCTC+AGG | + | chr8_3:69654629-69654648 | None:intergenic | 50.0% | |
| AGGAAGATGAGAGAGGCAGA+CGG | - | chr8_3:69654794-69654813 | Msa1305850:intron | 50.0% | |
| CTACTGTTGCAGGAAAGCAG+GGG | + | chr8_3:69655274-69655293 | None:intergenic | 50.0% | |
| CCCAGCTGTAGCGAGAAAAA+AGG | + | chr8_3:69656433-69656452 | None:intergenic | 50.0% | |
| TCCAGGAAGACAATGTGTGG+GGG | - | chr8_3:69656488-69656507 | Msa1305850:CDS | 50.0% | |
| ! | CAGGTCCTAAGAGCATGTCT+AGG | + | chr8_3:69656568-69656587 | None:intergenic | 50.0% |
| CTAGACATGCTCTTAGGACC+TGG | - | chr8_3:69656566-69656585 | Msa1305850:CDS | 50.0% | |
| AGACATGCTCTTAGGACCTG+GGG | - | chr8_3:69656568-69656587 | Msa1305850:CDS | 50.0% | |
| ACACGACTCCGAGAACAAAG+CGG | - | chr8_3:69657319-69657338 | Msa1305850:intron | 50.0% | |
| CAAAGCGGTAAAAGGCGACT+AGG | - | chr8_3:69657334-69657353 | Msa1305850:intron | 50.0% | |
| CGTCTACACCATGAGGATGT+AGG | - | chr8_3:69657380-69657399 | Msa1305850:intron | 50.0% | |
| GTAGGAGACCAAACTGCCAT+TGG | - | chr8_3:69657398-69657417 | Msa1305850:intron | 50.0% | |
| GAGACCAAACTGCCATTGGA+GGG | - | chr8_3:69657402-69657421 | Msa1305850:intron | 50.0% | |
| AGGATCCATTTCTTCGCCCC+GGG | + | chr8_3:69650153-69650172 | None:intergenic | 55.0% | |
| CAGGATCCATTTCTTCGCCC+CGG | + | chr8_3:69650154-69650173 | None:intergenic | 55.0% | |
| TGATGCAGTGCATAGCGACC+AGG | + | chr8_3:69650173-69650192 | None:intergenic | 55.0% | |
| GGTCGCTATGCACTGCATCA+AGG | - | chr8_3:69650173-69650192 | Msa1305850:intron | 55.0% | |
| GCTATGCACTGCATCAAGGC+TGG | - | chr8_3:69650177-69650196 | Msa1305850:intron | 55.0% | |
| CCATAACCCTCAAGAGCCTG+TGG | + | chr8_3:69650414-69650433 | None:intergenic | 55.0% | |
| CCACAGGCTCTTGAGGGTTA+TGG | - | chr8_3:69650411-69650430 | Msa1305850:intron | 55.0% | |
| GGCTCTTGAGGGTTATGGTG+CGG | - | chr8_3:69650416-69650435 | Msa1305850:intron | 55.0% | |
| GAGGCTATGACAAACCTGCC+AGG | - | chr8_3:69650994-69651013 | Msa1305850:intron | 55.0% | |
| GACAAACCTGCCAGGTTTGC+AGG | - | chr8_3:69651002-69651021 | Msa1305850:intron | 55.0% | |
| GATGGGAAACACGGGACTTG+TGG | + | chr8_3:69651064-69651083 | None:intergenic | 55.0% | |
| !! | CCTCCGATGATGGGAAACAC+GGG | + | chr8_3:69651072-69651091 | None:intergenic | 55.0% |
| !! | CCCTCCGATGATGGGAAACA+CGG | + | chr8_3:69651073-69651092 | None:intergenic | 55.0% |
| CCGTGTTTCCCATCATCGGA+GGG | - | chr8_3:69651070-69651089 | Msa1305850:intron | 55.0% | |
| TGTTTCCCATCATCGGAGGG+AGG | - | chr8_3:69651073-69651092 | Msa1305850:intron | 55.0% | |
| GACTATCCTCCCTCCGATGA+TGG | + | chr8_3:69651082-69651101 | None:intergenic | 55.0% | |
| CGCGATCTCGTTCTCGATCT+CGG | - | chr8_3:69651267-69651286 | Msa1305850:intron | 55.0% | |
| ! | AGTAAGCCAACTGGAGGTGC+GGG | - | chr8_3:69652099-69652118 | Msa1305850:intron | 55.0% |
| GGACCTGATAGCAGGAAGTC+CGG | + | chr8_3:69652221-69652240 | None:intergenic | 55.0% | |
| CAACCCCCACTCCGAGTAAA+AGG | + | chr8_3:69652721-69652740 | None:intergenic | 55.0% | |
| GACTTCGTCTGGCAACAGCA+AGG | + | chr8_3:69653206-69653225 | None:intergenic | 55.0% | |
| GGAACGGCCCTTGAGAAGAA+TGG | - | chr8_3:69653344-69653363 | Msa1305850:intron | 55.0% | |
| ! | GCAAAAAGCATACTGGGGCC+TGG | - | chr8_3:69653389-69653408 | Msa1305850:intron | 55.0% |
| ! | TGTTTGGGAGTTTGGTGGGG+AGG | - | chr8_3:69653704-69653723 | Msa1305850:intron | 55.0% |
| ! | GTTTGGGAGTTTGGTGGGGA+GGG | - | chr8_3:69653705-69653724 | Msa1305850:intron | 55.0% |
| ! | TTTGGGAGTTTGGTGGGGAG+GGG | - | chr8_3:69653706-69653725 | Msa1305850:intron | 55.0% |
| !! | GTATTGGGGGAGGGTTTTGG+GGG | - | chr8_3:69653857-69653876 | Msa1305850:intron | 55.0% |
| !!! | TATTGGGGGAGGGTTTTGGG+GGG | - | chr8_3:69653858-69653877 | Msa1305850:intron | 55.0% |
| !!! | GGGTTTTGGGGGGTTATGGA+AGG | - | chr8_3:69653868-69653887 | Msa1305850:intron | 55.0% |
| AATGGAGGGGAGGACTTTGG+GGG | + | chr8_3:69654044-69654063 | None:intergenic | 55.0% | |
| GAATGGAGGGGAGGACTTTG+GGG | + | chr8_3:69654045-69654064 | None:intergenic | 55.0% | |
| GGAATGGAGGGGAGGACTTT+GGG | + | chr8_3:69654046-69654065 | None:intergenic | 55.0% | |
| GAGTTTGGAGGGGAATGGAG+GGG | + | chr8_3:69654057-69654076 | None:intergenic | 55.0% | |
| GGAGTTTGGAGGGGAATGGA+GGG | + | chr8_3:69654058-69654077 | None:intergenic | 55.0% | |
| AACCTTCGTGCATGAGGCCA+TGG | + | chr8_3:69656458-69656477 | None:intergenic | 55.0% | |
| !! | AGACAATGTGTGGGGGCACT+TGG | - | chr8_3:69656495-69656514 | Msa1305850:CDS | 55.0% |
| GTTCTCGGAGTCGTGTCTAG+TGG | + | chr8_3:69657315-69657334 | None:intergenic | 55.0% | |
| ACCTGCACGTCTACACCATG+AGG | - | chr8_3:69657373-69657392 | Msa1305850:intron | 55.0% | |
| TCCTCATGGTGTAGACGTGC+AGG | + | chr8_3:69657377-69657396 | None:intergenic | 55.0% | |
| GGAGACCAAACTGCCATTGG+AGG | - | chr8_3:69657401-69657420 | Msa1305850:intron | 55.0% | |
| CTCACCCTCCAATGGCAGTT+TGG | + | chr8_3:69657409-69657428 | None:intergenic | 55.0% | |
| AGCTACCCGGGGCGAAGAAA+TGG | - | chr8_3:69650145-69650164 | Msa1305850:intron | 60.0% | |
| CGGGGCGAAGAAATGGATCC+TGG | - | chr8_3:69650152-69650171 | Msa1305850:intron | 60.0% | |
| CCTTATCCTGACTGCCCCCA+CGG | + | chr8_3:69650324-69650343 | None:intergenic | 60.0% | |
| TTGCCACCAGGACCTGCTGT+TGG | - | chr8_3:69650780-69650799 | Msa1305850:intron | 60.0% | |
| TGACTCCACTGGCCAACAGC+AGG | + | chr8_3:69650795-69650814 | None:intergenic | 60.0% | |
| TCATGCCCTGCAAACCTGGC+AGG | + | chr8_3:69651011-69651030 | None:intergenic | 60.0% | |
| ACGGTCATGCCCTGCAAACC+TGG | + | chr8_3:69651015-69651034 | None:intergenic | 60.0% | |
| CCCGTGTTTCCCATCATCGG+AGG | - | chr8_3:69651069-69651088 | Msa1305850:intron | 60.0% | |
| CGTTCCCGTTCGCAATCTCG+TGG | - | chr8_3:69651317-69651336 | Msa1305850:intron | 60.0% | |
| CTACTACGGCTTCGACCTCG+AGG | + | chr8_3:69651371-69651390 | None:intergenic | 60.0% | |
| TCTGAACCCGCACCTCCAGT+TGG | + | chr8_3:69652108-69652127 | None:intergenic | 60.0% | |
| ! | ACTGGAGGTGCGGGTTCAGA+TGG | - | chr8_3:69652108-69652127 | Msa1305850:intron | 60.0% |
| ACGCCGGACTTCCTGCTATC+AGG | - | chr8_3:69652215-69652234 | Msa1305850:intron | 60.0% | |
| !! | GCAGGAGCATCATCTGTGCG+TGG | + | chr8_3:69652448-69652467 | None:intergenic | 60.0% |
| AGCATACTGGGGCCTGGATC+AGG | - | chr8_3:69653395-69653414 | Msa1305850:intron | 60.0% | |
| GCATACTGGGGCCTGGATCA+GGG | - | chr8_3:69653396-69653415 | Msa1305850:intron | 60.0% | |
| CATACTGGGGCCTGGATCAG+GGG | - | chr8_3:69653397-69653416 | Msa1305850:intron | 60.0% | |
| GTTCCTGACACCCCTGATCC+AGG | + | chr8_3:69653410-69653429 | None:intergenic | 60.0% | |
| !!! | GGGAGGGTTTTGGGGGGTTA+TGG | - | chr8_3:69653864-69653883 | Msa1305850:intron | 60.0% |
| ATGGAGGGGAGGACTTTGGG+GGG | + | chr8_3:69654043-69654062 | None:intergenic | 60.0% | |
| GGGAATGGAGGGGAGGACTT+TGG | + | chr8_3:69654047-69654066 | None:intergenic | 60.0% | |
| TTTGGAGGGGAATGGAGGGG+AGG | + | chr8_3:69654054-69654073 | None:intergenic | 60.0% | |
| GGGAGTTTGGAGGGGAATGG+AGG | + | chr8_3:69654059-69654078 | None:intergenic | 60.0% | |
| CTGTTGCAGGAAAGCAGGGG+CGG | + | chr8_3:69655271-69655290 | None:intergenic | 60.0% | |
| GTCCATGGCCTCATGCACGA+AGG | - | chr8_3:69656453-69656472 | Msa1305850:CDS | 60.0% | |
| GCCCCCACACATTGTCTTCC+TGG | + | chr8_3:69656492-69656511 | None:intergenic | 60.0% | |
| TGGTGTAGACGTGCAGGTCG+AGG | + | chr8_3:69657371-69657390 | None:intergenic | 60.0% | |
| AGCTAACCGTGGGGGCAGTC+AGG | - | chr8_3:69650315-69650334 | Msa1305850:intron | 65.0% | |
| CCGTGGGGGCAGTCAGGATA+AGG | - | chr8_3:69650321-69650340 | Msa1305850:intron | 65.0% | |
| !!! | GGGGAGGCGTTTTTGCCACC+AGG | - | chr8_3:69650768-69650787 | Msa1305850:intron | 65.0% |
| TGGCCAACAGCAGGTCCTGG+TGG | + | chr8_3:69650786-69650805 | None:intergenic | 65.0% | |
| CACTGGCCAACAGCAGGTCC+TGG | + | chr8_3:69650789-69650808 | None:intergenic | 65.0% | |
| CAGGACCTGCTGTTGGCCAG+TGG | - | chr8_3:69650787-69650806 | Msa1305850:intron | 65.0% | |
| ! | GAGTTTGGTGGGGAGGGGAG+CGG | - | chr8_3:69653711-69653730 | Msa1305850:intron | 65.0% |
| ! | GGGAGGGGAGCGGAGAGTTT+TGG | - | chr8_3:69653721-69653740 | Msa1305850:intron | 65.0% |
| ! | AGGGGAGGACTTTGGGGGGT+TGG | + | chr8_3:69654039-69654058 | None:intergenic | 65.0% |
| CTCGCTACAGCTGGGGTCCA+TGG | - | chr8_3:69656438-69656457 | Msa1305850:CDS | 65.0% | |
| CGTGCAGGTCGAGGACGACT+TGG | + | chr8_3:69657362-69657381 | None:intergenic | 65.0% | |
| GAGCGCGTGTCGAGCGTGAG+AGG | + | chr8_3:69649690-69649709 | None:intergenic | 70.0% | |
| !! | GGGCCTGGATCAGGGGTGTC+AGG | - | chr8_3:69653404-69653423 | Msa1305850:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 69649674 | 69657683 | 69649674 | ID=Msa1305850;Name=Msa1305850 |
| chr8_3 | mRNA | 69649674 | 69657683 | 69649674 | ID=Msa1305850-mRNA-1;Parent=Msa1305850;Name=Msa1305850-mRNA-1;_AED=0.18;_eAED=0.18;_QI=156|0.84|0.78|0.85|0.76|0.78|14|0|603 |
| chr8_3 | exon | 69649674 | 69649800 | 69649674 | ID=Msa1305850-mRNA-1:exon:21556;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69652950 | 69652956 | 69652950 | ID=Msa1305850-mRNA-1:exon:21555;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69653914 | 69654049 | 69653914 | ID=Msa1305850-mRNA-1:exon:21554;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69654493 | 69654561 | 69654493 | ID=Msa1305850-mRNA-1:exon:21553;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69654672 | 69654763 | 69654672 | ID=Msa1305850-mRNA-1:exon:21552;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69654834 | 69654921 | 69654834 | ID=Msa1305850-mRNA-1:exon:21551;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69655121 | 69655259 | 69655121 | ID=Msa1305850-mRNA-1:exon:21550;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69655382 | 69655461 | 69655382 | ID=Msa1305850-mRNA-1:exon:21549;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69655539 | 69655631 | 69655539 | ID=Msa1305850-mRNA-1:exon:21548;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69655719 | 69655790 | 69655719 | ID=Msa1305850-mRNA-1:exon:21547;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69655870 | 69656686 | 69655870 | ID=Msa1305850-mRNA-1:exon:21546;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69656900 | 69656940 | 69656900 | ID=Msa1305850-mRNA-1:exon:21545;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69657146 | 69657240 | 69657146 | ID=Msa1305850-mRNA-1:exon:21544;Parent=Msa1305850-mRNA-1 |
| chr8_3 | exon | 69657575 | 69657683 | 69657575 | ID=Msa1305850-mRNA-1:exon:21543;Parent=Msa1305850-mRNA-1 |
| chr8_3 | five_prime_UTR | 69657575 | 69657683 | 69657575 | ID=Msa1305850-mRNA-1:five_prime_utr;Parent=Msa1305850-mRNA-1 |
| chr8_3 | five_prime_UTR | 69657194 | 69657240 | 69657194 | ID=Msa1305850-mRNA-1:five_prime_utr;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69657146 | 69657193 | 69657146 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69656900 | 69656940 | 69656900 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69655870 | 69656686 | 69655870 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69655719 | 69655790 | 69655719 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69655539 | 69655631 | 69655539 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69655382 | 69655461 | 69655382 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69655121 | 69655259 | 69655121 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69654834 | 69654921 | 69654834 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69654672 | 69654763 | 69654672 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69654493 | 69654561 | 69654493 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69653914 | 69654049 | 69653914 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69652950 | 69652956 | 69652950 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| chr8_3 | CDS | 69649674 | 69649800 | 69649674 | ID=Msa1305850-mRNA-1:cds;Parent=Msa1305850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
