AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1306310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1306310 MtrunA17_Chr8g0353071 99.693 326 1 0 1 326 1 326 0.0 680
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1306310 AT2G40030.2 61.468 327 120 4 1 326 1 322 2.65e-126 397
Msa1306310 AT2G40030.1 61.468 327 120 4 1 326 1 322 7.03e-126 397

Find 300 sgRNAs with CRISPR-Local

Find 993 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGTTCCGCAAATATAATT+TGG 0.131545 8_4:-1181923 Msa1306310:three_prime_UTR
GTTGACTCGCATGGCTAATT+TGG 0.135785 8_4:+1193035 None:intergenic
CAAAGATGCATGACGGATTT+TGG 0.146184 8_4:-1190360 Msa1306310:CDS
TCGCGAAAATGCTGCATATT+TGG 0.188279 8_4:-1186762 Msa1306310:three_prime_UTR
TAATTCCTGAATTTGCTTAA+TGG 0.189166 8_4:+1181719 None:intergenic
CCAGTACCGGTGATTCTTAT+TGG 0.224768 8_4:-1187943 Msa1306310:three_prime_UTR
CACATTTGATCAAGCGATTC+AGG 0.227895 8_4:-1181682 Msa1306310:intron
TCCATCATCCAGTTTGAATA+TGG 0.267312 8_4:-1187116 Msa1306310:three_prime_UTR
GACAAGGTAATTCAACAAAT+TGG 0.271179 8_4:-1187458 Msa1306310:three_prime_UTR
CTCAAAGGATGCTTCTTTCA+TGG 0.272458 8_4:-1187305 Msa1306310:three_prime_UTR
CTTGGGCTTCCACTTGAGTT+TGG 0.274442 8_4:-1192998 Msa1306310:CDS
CGCTGCTAAAGCTGAGGTTT+TGG 0.285822 8_4:-1188149 Msa1306310:three_prime_UTR
CTTACCTCAGAGATTAATTT+CGG 0.295804 8_4:+1194790 None:intergenic
GATAGTGCACCGGAGGATTA+TGG 0.300127 8_4:-1188344 Msa1306310:three_prime_UTR
GTCAATCAAATCTCCAAGTT+TGG 0.306711 8_4:+1187502 None:intergenic
TAATGCCACTACATCCCTTT+TGG 0.310765 8_4:-1193250 Msa1306310:CDS
TTTCCTCAAATGTGATCCTT+TGG 0.310771 8_4:+1188500 None:intergenic
GTCCAAGCAGCAATTCTTCC+TGG 0.316906 8_4:-1186983 Msa1306310:three_prime_UTR
TTATGCCATTAAGCAAATTC+AGG 0.328916 8_4:-1181724 Msa1306310:three_prime_UTR
ACATAATGCTTACAATTTCA+TGG 0.331187 8_4:+1193187 None:intergenic
ATGCTGCACAAGTTTCTATT+CGG 0.331630 8_4:-1190435 Msa1306310:CDS
GATTATCCCTCTGCTGAGTT+TGG 0.333927 8_4:-1187332 Msa1306310:three_prime_UTR
CATTCAAGATATTGAACTTC+CGG 0.335773 8_4:-1187549 Msa1306310:three_prime_UTR
TAATTCACCATTAGAAGATT+TGG 0.339231 8_4:+1181863 None:intergenic
CAACTGGCTAATCCTTTCCT+TGG 0.340656 8_4:-1193016 Msa1306310:CDS
CAGTTCCGCAAATATAATTT+GGG 0.341582 8_4:-1181922 Msa1306310:three_prime_UTR
TTCCTCAAATGTGATCCTTT+GGG 0.345387 8_4:+1188501 None:intergenic
ACTTGATGAGACTCAAAGTT+TGG 0.345795 8_4:+1188768 None:intergenic
TCAAATCAGGGGAACTTCTA+AGG 0.346971 8_4:-1188706 Msa1306310:CDS
TATGACTTGTGGCGGAAATT+TGG 0.347283 8_4:-1180757 Msa1306310:three_prime_UTR
TAAGCAAATTCAGGAATTAC+TGG 0.347803 8_4:-1181715 Msa1306310:three_prime_UTR
TGAATTTGCTTAATGGCATA+AGG 0.348126 8_4:+1181726 None:intergenic
CCCCTTGTGTAACGTTCCTT+TGG 0.351503 8_4:-1183094 Msa1306310:three_prime_UTR
CCTTTCTCGTTCGATTGTAC+TGG 0.352620 8_4:-1187890 Msa1306310:three_prime_UTR
TTCCTCTCTCAAAGAGTTGT+TGG 0.355481 8_4:+1187426 None:intergenic
TCCTTTGCAAGGTGAACTTC+AGG 0.367786 8_4:-1186850 Msa1306310:three_prime_UTR
ACATGGCTAGGATGATAAAT+AGG 0.368151 8_4:+1192812 None:intergenic
ATCTCCAGTGATCACATTCC+GGG 0.369096 8_4:+1188567 None:intergenic
ACTGGCACAGACAGGCAATT+TGG 0.369458 8_4:+1188982 None:intergenic
ATGATTGTTTCTAACAGAAC+TGG 0.372759 8_4:+1183017 None:intergenic
CATCTCCAGTGATCACATTC+CGG 0.375541 8_4:+1188566 None:intergenic
TTGACTCGCATGGCTAATTT+GGG 0.377914 8_4:+1193036 None:intergenic
AAAATTACACGACGATCATT+TGG 0.378614 8_4:+1186821 None:intergenic
CAGTGAAAAGGGTTATAAAT+AGG 0.379830 8_4:-1187652 Msa1306310:three_prime_UTR
TCACTGAGGGAGGGCTCAAA+GGG 0.385792 8_4:-1188391 Msa1306310:three_prime_UTR
AACTGGCTAATCCTTTCCTT+GGG 0.386695 8_4:-1193015 Msa1306310:CDS
CAGCCAGGACTTTAGTCGTT+TGG 0.388826 8_4:+1183051 None:intergenic
AGCTGATGGGGCTTGTTACT+TGG 0.388870 8_4:-1190401 Msa1306310:CDS
TGCTGCACAAGTTTCTATTC+GGG 0.390438 8_4:-1190434 Msa1306310:CDS
TTTGAATATGGCATACAATC+TGG 0.393145 8_4:-1187104 Msa1306310:three_prime_UTR
TTCAAAGCAAAATTTATAAC+CGG 0.397809 8_4:+1187530 None:intergenic
TCGATCAGTATCTTCAAATC+AGG 0.399203 8_4:-1188719 Msa1306310:CDS
GATTAGGCAGAGGGAAATCT+TGG 0.400028 8_4:-1187855 Msa1306310:three_prime_UTR
ATTGTATGCCATATTCAAAC+TGG 0.400497 8_4:+1187108 None:intergenic
GTTGTTTATCAGAAAGGGTT+CGG 0.403083 8_4:-1188598 Msa1306310:CDS
ACGAAGAAGTTCGTTTAAGT+TGG 0.405034 8_4:+1195013 None:intergenic
CAATATCCAGGGCAGTGAAA+AGG 0.409438 8_4:-1187664 Msa1306310:three_prime_UTR
AGAACTGGTGGCTCAACAAT+TGG 0.415224 8_4:-1187579 Msa1306310:three_prime_UTR
AAGTTTCTTCTTCCGACTAA+AGG 0.416698 8_4:+1184150 None:intergenic
TTGTTTATCAGAAAGGGTTC+GGG 0.417716 8_4:-1188597 Msa1306310:CDS
GCTATTTCATTTATAATTGA+AGG 0.424062 8_4:+1187806 None:intergenic
CTAGGATGATAAATAGGAAC+TGG 0.424619 8_4:+1192818 None:intergenic
TAAAGGAATTAAGTTTCTCT+TGG 0.426089 8_4:+1184167 None:intergenic
GAATGCACCAACTCTTCATA+TGG 0.426147 8_4:+1187275 None:intergenic
GATGTTGTTATTTGCTATGA+TGG 0.428131 8_4:-1187164 Msa1306310:three_prime_UTR
GAAACAAAGAAGAAACTTGC+GGG 0.430427 8_4:-1189057 Msa1306310:CDS
CTCACTGAGGGAGGGCTCAA+AGG 0.431129 8_4:-1188392 Msa1306310:three_prime_UTR
CACCAGCAGGGAATAAGTGC+TGG 0.431400 8_4:+1187072 None:intergenic
CGAACCCATGTGTTCGTGCC+AGG 0.432945 8_4:+1181894 None:intergenic
TATAAGAAAATAAATGAAGT+TGG 0.433590 8_4:-1188541 Msa1306310:three_prime_UTR
CTTTGCGTCTTCGCTGCTGC+TGG 0.434222 8_4:+1185632 None:intergenic
ACCTTTGTTGCGTCAGCTGA+GGG 0.434810 8_4:-1187612 Msa1306310:three_prime_UTR
GAATTTGCTTAATGGCATAA+GGG 0.435352 8_4:+1181727 None:intergenic
TCAAGGACTGCTTTATAAGC+AGG 0.435383 8_4:+1187011 None:intergenic
CATCCACTATTTACAGAAGT+TGG 0.435821 8_4:-1188461 Msa1306310:three_prime_UTR
AAGAAGAAACTTGCGGGAAA+GGG 0.436242 8_4:-1189051 Msa1306310:CDS
TTGTGTAACGTTCCTTTGGC+CGG 0.438585 8_4:-1183090 Msa1306310:three_prime_UTR
GGCTTGTTACTTGGCACTAA+AGG 0.439166 8_4:-1190392 Msa1306310:CDS
CCAATAAGAATCACCGGTAC+TGG 0.444285 8_4:+1187943 None:intergenic
CCACTAATATGTGGACCACT+AGG 0.447790 8_4:-1188220 Msa1306310:three_prime_UTR
AGGGTTATAAATAGGAGCAT+TGG 0.451263 8_4:-1187644 Msa1306310:three_prime_UTR
GGGTTATAAATAGGAGCATT+GGG 0.451667 8_4:-1187643 Msa1306310:three_prime_UTR
AACCCGTCCAAATCTTCTAA+TGG 0.452809 8_4:-1181870 Msa1306310:three_prime_UTR
CCACCAACTTCTGTAAATAG+TGG 0.452837 8_4:+1188458 None:intergenic
GCTTTGAAGTCAACCAAACT+TGG 0.454148 8_4:-1187515 Msa1306310:three_prime_UTR
CAACAACCTTCCCTTCCAAA+AGG 0.455890 8_4:+1193235 None:intergenic
GTATCAATCAAATGAAGAAC+AGG 0.457075 8_4:+1181762 None:intergenic
TATTTAAATGATTGTGATTG+TGG 0.461604 8_4:-1186797 Msa1306310:three_prime_UTR
TGTTGGGATCCGCTTCAGTA+TGG 0.462471 8_4:-1193217 Msa1306310:CDS
AATATCCAGGGCAGTGAAAA+GGG 0.463892 8_4:-1187663 Msa1306310:three_prime_UTR
ACCTTCTTCAAGCAGTGGCT+TGG 0.464036 8_4:-1191449 Msa1306310:CDS
CTGGAGGACGATACTTGATT+AGG 0.464920 8_4:-1187871 Msa1306310:three_prime_UTR
CACCTTTGTTGCGTCAGCTG+AGG 0.466066 8_4:-1187613 Msa1306310:three_prime_UTR
TTAAACAAAGTGGCGATGCT+TGG 0.466810 8_4:-1181809 Msa1306310:three_prime_UTR
AATATAATTTGGGTTAATCC+TGG 0.467249 8_4:-1181912 Msa1306310:three_prime_UTR
AGGACGTTGTTTATCAGAAA+GGG 0.467254 8_4:-1188603 Msa1306310:CDS
GCTGAGTTTGGTTTGCTCAA+AGG 0.469853 8_4:-1187320 Msa1306310:three_prime_UTR
AAAGAAGAAACTTGCGGGAA+AGG 0.471811 8_4:-1189052 Msa1306310:CDS
CACACTATTCAAGAACTTGA+TGG 0.472726 8_4:-1187198 Msa1306310:three_prime_UTR
ATTAACCCAAATTATATTTG+CGG 0.472742 8_4:+1181917 None:intergenic
ATCGATTTACCGAGTAAGCT+AGG 0.474755 8_4:+1195170 None:intergenic
AATTAGCCATGCGAGTCAAC+TGG 0.475512 8_4:-1193032 Msa1306310:CDS
CGATCAAACCCTAGCTTACT+CGG 0.476936 8_4:-1195179 Msa1306310:intron
TTATTCCAAGGGATTGGTTG+AGG 0.477376 8_4:-1187399 Msa1306310:three_prime_UTR
AATTGAAGGTAAAATATCTC+TGG 0.478141 8_4:+1187820 None:intergenic
GTCATCAGAAGTTCAAGATC+TGG 0.480082 8_4:-1188795 Msa1306310:CDS
TCTTGTGGCACTTCCGAAGC+AGG 0.481323 8_4:-1192965 Msa1306310:CDS
GCCCAGCACTTATTCCCTGC+TGG 0.483746 8_4:-1187074 Msa1306310:three_prime_UTR
CCTAGTGGTCCACATATTAG+TGG 0.484770 8_4:+1188220 None:intergenic
GACAGGCAATTTGGTGGTAC+AGG 0.485362 8_4:+1188991 None:intergenic
GTGACTGAGGGTAAAACAAA+TGG 0.488393 8_4:+1188173 None:intergenic
AATAACAACATCACGGAGAA+TGG 0.488776 8_4:+1187175 None:intergenic
TCCAAGCAGCAATTCTTCCT+GGG 0.490021 8_4:-1186982 Msa1306310:three_prime_UTR
CAATTCTCAGAAAATTGCTT+AGG 0.490203 8_4:-1188827 Msa1306310:CDS
GCCATATTCAAACTGGATGA+TGG 0.490417 8_4:+1187115 None:intergenic
AAGGAGTGCTTGTGGGTAGT+TGG 0.490476 8_4:+1188292 None:intergenic
TTGTCACATTCGTCTTAAAG+AGG 0.493353 8_4:-1185584 Msa1306310:intron
CGGAATGTGATCACTGGAGA+TGG 0.494264 8_4:-1188565 Msa1306310:exon
CGGGAGGTCAAAACAGCTGA+TGG 0.495038 8_4:-1190415 Msa1306310:CDS
GAGGGGAATGTACAAAGAAC+TGG 0.496006 8_4:-1187594 Msa1306310:three_prime_UTR
AATTATTTCTCTCGTTGCAA+TGG 0.496906 8_4:+1187253 None:intergenic
AGTTTCTTCTTTGTTTCTTG+AGG 0.498946 8_4:+1189063 None:intergenic
CAGGTACCTTCTTCAAGCAG+TGG 0.500311 8_4:-1191454 Msa1306310:CDS
TGCCCAAAGGATCACATTTG+AGG 0.501548 8_4:-1188503 Msa1306310:three_prime_UTR
ACACCTACAGGCTCACCAGC+AGG 0.504468 8_4:+1187059 None:intergenic
TCAGTAAGAATGGTGGCAAA+AGG 0.504697 8_4:-1180816 Msa1306310:three_prime_UTR
TTCTAATGGTGAATTAGCAC+TGG 0.505257 8_4:-1181856 Msa1306310:three_prime_UTR
GCCAATGCCTGCTTTACTCA+AGG 0.506133 8_4:-1187966 Msa1306310:three_prime_UTR
ATTTACCAAGGTATTCATCA+TGG 0.507351 8_4:-1193277 Msa1306310:exon
TGCTTGCAAGGAGTGCTTGT+GGG 0.508010 8_4:+1188285 None:intergenic
AACAAAGTGGCGATGCTTGG+AGG 0.509129 8_4:-1181806 Msa1306310:three_prime_UTR
AAGTTCTTGAATAGTGTGCC+TGG 0.510073 8_4:+1187203 None:intergenic
CCCCAGGAAGAATTGCTGCT+TGG 0.511813 8_4:+1186981 None:intergenic
CCAGTACAATCGAACGAGAA+AGG 0.512042 8_4:+1187890 None:intergenic
CAAATGAAGAACAGGAAGGC+AGG 0.515857 8_4:+1181770 None:intergenic
TGGTGTCAGTATCATGTCTT+CGG 0.516184 8_4:-1188950 Msa1306310:intron
TCTTCCCGGAATGTGATCAC+TGG 0.517593 8_4:-1188571 Msa1306310:exon
CCTTGCAGCATCAGTAAGAA+TGG 0.518047 8_4:-1180826 Msa1306310:three_prime_UTR
GAGGACGTTGTTTATCAGAA+AGG 0.518542 8_4:-1188604 Msa1306310:CDS
CTGACACCATCTGAAACTAC+TGG 0.520358 8_4:+1188964 None:intergenic
TTCCTCAACAAAAGCGTGGT+TGG 0.522349 8_4:-1188634 Msa1306310:CDS
TCTCAGAAAATTGCTTAGGA+AGG 0.522723 8_4:-1188823 Msa1306310:CDS
TTTAAAATATATCCATCTTG+AGG 0.523464 8_4:+1189021 None:intergenic
TGAGCCCTCCCTCAGTGAGT+AGG 0.523565 8_4:+1188396 None:intergenic
AAAATTAATCCACTAATATG+TGG 0.526626 8_4:-1188229 Msa1306310:three_prime_UTR
GTAACGTTCCTTTGGCCGGA+TGG 0.527495 8_4:-1183086 Msa1306310:three_prime_UTR
TTAATCCTGGCACGAACACA+TGG 0.527795 8_4:-1181899 Msa1306310:three_prime_UTR
TGGTCTAAATCAACACCATC+CGG 0.531100 8_4:+1183071 None:intergenic
TCGAGCTTTGCTTCCTTGTG+AGG 0.532221 8_4:-1190293 Msa1306310:intron
CTCCGGTGCACTATCTGACC+AGG 0.532474 8_4:+1188352 None:intergenic
AACAACCTTCCCTTCCAAAA+GGG 0.533947 8_4:+1193236 None:intergenic
AGAAACTTAATTCCTTTAGT+CGG 0.533976 8_4:-1184162 Msa1306310:three_prime_UTR
CACCATTAGAAGATTTGGAC+GGG 0.535250 8_4:+1181868 None:intergenic
TAGAGTAGCAGCAAATCAAA+TGG 0.535766 8_4:-1188011 Msa1306310:three_prime_UTR
TTCAACTCAGTAACATGGCT+AGG 0.537230 8_4:+1192800 None:intergenic
GAGTGCTTGTGGGTAGTTGG+CGG 0.538116 8_4:+1188295 None:intergenic
GTAATCCCACACTAAATCCA+TGG 0.539218 8_4:+1187696 None:intergenic
CGATCAGTATCTTCAAATCA+GGG 0.539398 8_4:-1188718 Msa1306310:CDS
AGACCAAACGACTAAAGTCC+TGG 0.539427 8_4:-1183054 Msa1306310:three_prime_UTR
CCACTATTTACAGAAGTTGG+TGG 0.541071 8_4:-1188458 Msa1306310:three_prime_UTR
TGCACCGGAGGATTATGGAC+GGG 0.542650 8_4:-1188339 Msa1306310:three_prime_UTR
CTGGGCAGATCATGTCAGCC+AGG 0.542984 8_4:+1183036 None:intergenic
TTTGCCCATGGATTTAGTGT+GGG 0.543769 8_4:-1187701 Msa1306310:three_prime_UTR
ATCTTCCATGATGAATACCT+TGG 0.544269 8_4:+1193272 None:intergenic
CACTAATATGTGGACCACTA+GGG 0.544416 8_4:-1188219 Msa1306310:three_prime_UTR
GCACTCCTTGCAAGCACTTG+TGG 0.544514 8_4:-1188278 Msa1306310:three_prime_UTR
CAAGGACTGCTTTATAAGCA+GGG 0.545811 8_4:+1187012 None:intergenic
TTTAGATCCATATGAAGAGT+TGG 0.546852 8_4:-1187282 Msa1306310:three_prime_UTR
TACATCCTCAACCAATCCCT+TGG 0.547154 8_4:+1187394 None:intergenic
GTTGAAGAAAATACTGAGCC+TGG 0.547593 8_4:-1192783 Msa1306310:CDS
ATTTGCCCATGGATTTAGTG+TGG 0.549495 8_4:-1187702 Msa1306310:three_prime_UTR
GCTTTACTCAAGGCCAGTAC+CGG 0.550010 8_4:-1187956 Msa1306310:three_prime_UTR
TAAATGATTGTGATTGTGGA+AGG 0.551263 8_4:-1186793 Msa1306310:three_prime_UTR
GCCTTGAGTAAAGCAGGCAT+TGG 0.552361 8_4:+1187965 None:intergenic
GTATACCACAAGTGCTTGCA+AGG 0.553202 8_4:+1188273 None:intergenic
TCGATTTACCGAGTAAGCTA+GGG 0.554187 8_4:+1195171 None:intergenic
TTCTCGTTCGATTGTACTGG+AGG 0.555688 8_4:-1187887 Msa1306310:three_prime_UTR
ATCCTTTGGGCAACCTCAAG+CGG 0.557432 8_4:+1188514 None:intergenic
CCCTTCCAAAAGGGATGTAG+TGG 0.558987 8_4:+1193245 None:intergenic
AAACTTTGAGTCTCATCAAG+TGG 0.559410 8_4:-1188766 Msa1306310:CDS
CAGCAGCGAAGACGCAAAGA+TGG 0.559986 8_4:-1185628 Msa1306310:three_prime_UTR
AAACTTGTGCTTGACATACA+AGG 0.560154 8_4:-1188431 Msa1306310:three_prime_UTR
GTGATATTGAAACACACTAC+GGG 0.560230 8_4:-1188677 Msa1306310:CDS
TTCCCTGCTGGTGAGCCTGT+AGG 0.561793 8_4:-1187062 Msa1306310:three_prime_UTR
TTTCTGAGAATTGTCAAGGC+CGG 0.564527 8_4:+1188837 None:intergenic
GGCCAACAACTCTTTGAGAG+AGG 0.565104 8_4:-1187428 Msa1306310:three_prime_UTR
GCCAAGCCACTGCTTGAAGA+AGG 0.565357 8_4:+1191448 None:intergenic
GCTTTAGCAGCGAGTGACTG+AGG 0.565556 8_4:+1188160 None:intergenic
AAAGAAGCTGTTAAACAAAG+TGG 0.566078 8_4:-1181819 Msa1306310:three_prime_UTR
GGCACAGACAGGCAATTTGG+TGG 0.568422 8_4:+1188985 None:intergenic
GACGATACTTGATTAGGCAG+AGG 0.568804 8_4:-1187865 Msa1306310:three_prime_UTR
CTGAAACTACTGGCACAGAC+AGG 0.569055 8_4:+1188974 None:intergenic
GGGAGGTCAAAACAGCTGAT+GGG 0.570348 8_4:-1190414 Msa1306310:CDS
ACCAGCAGGGAATAAGTGCT+GGG 0.571692 8_4:+1187073 None:intergenic
GTACTGGCCTTGAGTAAAGC+AGG 0.572233 8_4:+1187959 None:intergenic
TGTGATACAACCCTTTCTGA+TGG 0.573002 8_4:-1187732 Msa1306310:three_prime_UTR
TGAAGTTGGAATTCCGCTTG+AGG 0.574102 8_4:-1188527 Msa1306310:three_prime_UTR
CCATTCTTACTGATGCTGCA+AGG 0.574624 8_4:+1180826 None:intergenic
AAGCAAATTCAGGAATTACT+GGG 0.575096 8_4:-1181714 Msa1306310:three_prime_UTR
GTTGCAGCTAAGACACCTAC+AGG 0.575255 8_4:+1187047 None:intergenic
CCCCTCAGCTGACGCAACAA+AGG 0.575410 8_4:+1187611 None:intergenic
CAACTTCTCAGCTCTCATAG+TGG 0.575975 8_4:-1188106 Msa1306310:three_prime_UTR
TATCCCCGTCCATAATCCTC+CGG 0.576650 8_4:+1188335 None:intergenic
GGCAATTTGGTGGTACAGGA+AGG 0.577934 8_4:+1188995 None:intergenic
TGCTGCTTGGACTAGCATCA+AGG 0.578423 8_4:+1186994 None:intergenic
AAGAATCTGCGGATAACTGA+AGG 0.580368 8_4:+1188074 None:intergenic
GAGTAAGTCGGCTGTTGACA+AGG 0.580785 8_4:-1187474 Msa1306310:three_prime_UTR
ACTTGTGGCGGAAATTTGGT+TGG 0.582618 8_4:-1180753 Msa1306310:three_prime_UTR
ATGGAAAACATATTTGCCCA+TGG 0.583160 8_4:-1187713 Msa1306310:three_prime_UTR
TCCTGAAGTTCACCTTGCAA+AGG 0.583380 8_4:+1186849 None:intergenic
ATAATTGACCGCTCTTCTAG+AGG 0.585222 8_4:-1187236 Msa1306310:three_prime_UTR
AGTAAAGCAGGCATTGGCAA+AGG 0.585696 8_4:+1187971 None:intergenic
AAAGATGGTACTGAAGATGC+AGG 0.587110 8_4:-1185613 Msa1306310:three_prime_UTR
AGATGTCCAATAAGAATCAC+CGG 0.588457 8_4:+1187937 None:intergenic
GCAAGCAGCTTAAGCAGACC+AGG 0.588483 8_4:+1192765 None:intergenic
TCACATCGTCCAAACTCAAG+TGG 0.591702 8_4:+1192989 None:intergenic
GACCACGGATTGCAAGTCGT+TGG 0.594166 8_4:+1188740 None:intergenic
CCAAGCAGCAATTCTTCCTG+GGG 0.594852 8_4:-1186981 Msa1306310:three_prime_UTR
ATTGAAGTGTTTCTATGACA+AGG 0.595063 8_4:-1187357 Msa1306310:three_prime_UTR
TTGATCGTTGTTGAGAAAAG+CGG 0.595167 8_4:+1195195 None:intergenic
GATTGACTCAAAGAGTAAGT+CGG 0.596752 8_4:-1187486 Msa1306310:three_prime_UTR
TCACCATTAGAAGATTTGGA+CGG 0.598086 8_4:+1181867 None:intergenic
TCAGGAAATACTCCTTTGCA+AGG 0.598960 8_4:-1186861 Msa1306310:intron
CTTTAGCAGCGAGTGACTGA+GGG 0.598983 8_4:+1188161 None:intergenic
TCTAGAGGATTATCTGAACC+AGG 0.599943 8_4:-1187221 Msa1306310:three_prime_UTR
AATCAACACCATCCGGCCAA+AGG 0.600375 8_4:+1183078 None:intergenic
AGAAACAAAGAAGAAACTTG+CGG 0.607155 8_4:-1189058 Msa1306310:CDS
TACAGGTGGTTATAAAACAC+TGG 0.609039 8_4:-1180724 Msa1306310:three_prime_UTR
ACGATACTTGATTAGGCAGA+GGG 0.609749 8_4:-1187864 Msa1306310:three_prime_UTR
AGCTAGGTGATCGAAACCTA+CGG 0.611249 8_4:-1194981 Msa1306310:intron
TGATTGTTTCTAACAGAACT+GGG 0.613043 8_4:+1183018 None:intergenic
TCAAGTGGAAGCCCAAGGAA+AGG 0.613967 8_4:+1193004 None:intergenic
GAAGTTCAATATATCCAAAG+TGG 0.616166 8_4:+1192840 None:intergenic
AGCAAACCAAACTCAGCAGA+GGG 0.616589 8_4:+1187326 None:intergenic
CACCTACAGGCTCACCAGCA+GGG 0.617416 8_4:+1187060 None:intergenic
TGCACAAGTTTCTATTCGGG+AGG 0.617450 8_4:-1190431 Msa1306310:CDS
GCACCGGAGGATTATGGACG+GGG 0.618401 8_4:-1188338 Msa1306310:three_prime_UTR
GTCAACCTACTCACTGAGGG+AGG 0.618704 8_4:-1188401 Msa1306310:three_prime_UTR
TAATCCCACACTAAATCCAT+GGG 0.618923 8_4:+1187697 None:intergenic
GGAGGTCAAAACAGCTGATG+GGG 0.620131 8_4:-1190413 Msa1306310:CDS
GGAATGTGATCACTGGAGAT+GGG 0.620522 8_4:-1188564 Msa1306310:exon
CGTGATATTGAAACACACTA+CGG 0.621124 8_4:-1188678 Msa1306310:CDS
TCCGAAGCAGGAAAATGCGA+AGG 0.622217 8_4:-1192953 Msa1306310:intron
ACTAATATGTGGACCACTAG+GGG 0.624249 8_4:-1188218 Msa1306310:three_prime_UTR
CCAAAGGAACGTTACACAAG+GGG 0.624956 8_4:+1183094 None:intergenic
TCTGTGCCAGTAGTTTCAGA+TGG 0.625840 8_4:-1188970 Msa1306310:CDS
CTCAACAATGAAATCTAGTG+CGG 0.626114 8_4:+1186703 None:intergenic
ATTGAGAAAAGTAAGCCTCA+AGG 0.626350 8_4:-1186729 Msa1306310:three_prime_UTR
GTCACTCGCTGCTAAAGCTG+AGG 0.627721 8_4:-1188155 Msa1306310:three_prime_UTR
TCAACCTACTCACTGAGGGA+GGG 0.629308 8_4:-1188400 Msa1306310:three_prime_UTR
GTATAGAACCACACCTCACA+AGG 0.629692 8_4:+1190280 None:intergenic
AACCTGGTCAGATAGTGCAC+CGG 0.629946 8_4:-1188354 Msa1306310:three_prime_UTR
TATTTGCGGAACTGATACGA+GGG 0.630635 8_4:+1181931 None:intergenic
GCAAGTAGTATGACTTGTGG+CGG 0.632064 8_4:-1180765 Msa1306310:three_prime_UTR
CAAGCAGCAATTCTTCCTGG+GGG 0.637266 8_4:-1186980 Msa1306310:three_prime_UTR
CTGTTAGAAACAATCATCCA+AGG 0.639450 8_4:-1183011 Msa1306310:intron
GGGCACACTTATCTTAAACC+TGG 0.639531 8_4:-1188370 Msa1306310:three_prime_UTR
AAATATGGCTATCGCTATGG+GGG 0.640574 8_4:-1190325 Msa1306310:CDS
GGCGTGTAGCCATACTGAAG+CGG 0.641119 8_4:+1193208 None:intergenic
CCTTTGTTGCGTCAGCTGAG+GGG 0.642002 8_4:-1187611 Msa1306310:three_prime_UTR
TTCATACTAACCTCACAGCA+AGG 0.643227 8_4:+1191409 None:intergenic
CTGGTCAGATAGTGCACCGG+AGG 0.646054 8_4:-1188351 Msa1306310:three_prime_UTR
TTCCGCTTGAGGTTGCCCAA+AGG 0.646417 8_4:-1188516 Msa1306310:three_prime_UTR
GATTAGCCAGTTGACTCGCA+TGG 0.647379 8_4:+1193026 None:intergenic
GGCCAAAGGAACGTTACACA+AGG 0.647881 8_4:+1183092 None:intergenic
CCATCAAAATCCGCCCCTAG+TGG 0.648212 8_4:+1188205 None:intergenic
AAAATATGGCTATCGCTATG+GGG 0.650684 8_4:-1190326 Msa1306310:CDS
TTTATAAGCAGGGTTTGACA+TGG 0.651336 8_4:+1187022 None:intergenic
GAGTGACAATAAAGAATCTG+CGG 0.651356 8_4:+1188063 None:intergenic
TATGTCAACCTACTCACTGA+GGG 0.651372 8_4:-1188404 Msa1306310:three_prime_UTR
GTGCACCGGAGGATTATGGA+CGG 0.653169 8_4:-1188340 Msa1306310:three_prime_UTR
AATCTAGTGCGGCATCCTTG+AGG 0.653964 8_4:+1186714 None:intergenic
TTGAAGATACTGATCGACCA+CGG 0.655043 8_4:+1188725 None:intergenic
CATAGCAAATAACAACATCA+CGG 0.655514 8_4:+1187168 None:intergenic
TCAAAGTCAAAGATGCATGA+CGG 0.656266 8_4:-1190367 Msa1306310:CDS
CAAACTCAAGTGGAAGCCCA+AGG 0.657522 8_4:+1192999 None:intergenic
TTTGGACGATGTGAATCTTG+TGG 0.658502 8_4:-1192980 Msa1306310:CDS
GTGCTTGCAAGGAGTGCTTG+TGG 0.660090 8_4:+1188284 None:intergenic
GAGCAAACCAAACTCAGCAG+AGG 0.660308 8_4:+1187325 None:intergenic
ATATTTGCGGAACTGATACG+AGG 0.660644 8_4:+1181930 None:intergenic
TTGTGCTTGACATACAAGGA+AGG 0.662825 8_4:-1188427 Msa1306310:three_prime_UTR
GTGTGTTTCAATATCACGTG+CGG 0.667024 8_4:+1188683 None:intergenic
ATTATTATCTCCTTGCTGTG+AGG 0.667844 8_4:-1191419 Msa1306310:intron
TGCAGCATCAGTAAGAATGG+TGG 0.671319 8_4:-1180823 Msa1306310:three_prime_UTR
CAATCAAATGAAGAACAGGA+AGG 0.673458 8_4:+1181766 None:intergenic
GGGAATGTACAAAGAACTGG+TGG 0.673825 8_4:-1187591 Msa1306310:three_prime_UTR
GCCAAAGGAACGTTACACAA+GGG 0.679298 8_4:+1183093 None:intergenic
CAGATAATCCTCTAGAAGAG+CGG 0.680363 8_4:+1187228 None:intergenic
TTAGCAAGTAGTATGACTTG+TGG 0.683505 8_4:-1180768 Msa1306310:three_prime_UTR
ATGATTCCTCAACAAAAGCG+TGG 0.685634 8_4:-1188638 Msa1306310:CDS
TAATCCTGGCACGAACACAT+GGG 0.693126 8_4:-1181898 Msa1306310:three_prime_UTR
CAGGTGCTACAGATTTACCA+AGG 0.695771 8_4:-1193289 Msa1306310:five_prime_UTR
CTTGCGATTGAAGAAAACCA+AGG 0.707699 8_4:-1192747 Msa1306310:intron
CACTGAGGGAGGGCTCAAAG+GGG 0.709032 8_4:-1188390 Msa1306310:three_prime_UTR
GATCAGTATCTTCAAATCAG+GGG 0.722908 8_4:-1188717 Msa1306310:CDS
TAAGACGAATGTGACAAACA+AGG 0.725781 8_4:+1185590 None:intergenic
AATATGTGGACCACTAGGGG+CGG 0.731668 8_4:-1188215 Msa1306310:three_prime_UTR
TGATATTGAAACACACTACG+GGG 0.732606 8_4:-1188676 Msa1306310:CDS
GTATGTCAACCTACTCACTG+AGG 0.759905 8_4:-1188405 Msa1306310:three_prime_UTR
TTTGCTATGATGGAACTGTG+AGG 0.778791 8_4:-1187154 Msa1306310:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAATTAAAAAATCAT+TGG + chr8_4:1182586-1182605 None:intergenic 10.0%
!!! ATAATTTTTAAACTTCAAAA+AGG - chr8_4:1184733-1184752 Msa1306310:intron 10.0%
!!! AAATTTGTTTAAATTTTCAA+AGG + chr8_4:1185288-1185307 None:intergenic 10.0%
!! AACAAATAGAATATTAAATT+CGG + chr8_4:1185387-1185406 None:intergenic 10.0%
!!! TTATGTCAATTTTATTTATT+TGG - chr8_4:1190290-1190309 Msa1306310:intron 10.0%
!!! TATGTCAATTTTATTTATTT+GGG - chr8_4:1190291-1190310 Msa1306310:intron 10.0%
!!! AATTTTTTTAATACATGTTT+AGG - chr8_4:1190408-1190427 Msa1306310:CDS 10.0%
!!! TTTTATAATTTAAAAAGCTT+AGG - chr8_4:1194575-1194594 Msa1306310:intron 10.0%
!! TAATAATTTCAACAGAATTA+AGG + chr8_4:1182613-1182632 None:intergenic 15.0%
!! TAATTCTGTTGAAATTATTA+AGG - chr8_4:1182613-1182632 Msa1306310:intron 15.0%
!! ATGTTATATTTCAAAAGAAT+TGG - chr8_4:1183077-1183096 Msa1306310:three_prime_UTR 15.0%
!! TGTTATATTTCAAAAGAATT+GGG - chr8_4:1183078-1183097 Msa1306310:three_prime_UTR 15.0%
!! TTAGATAAGAATAAACAAAT+AGG + chr8_4:1183334-1183353 None:intergenic 15.0%
!! AAAAAAGGAAAATATAACAA+CGG + chr8_4:1183383-1183402 None:intergenic 15.0%
!!! ACTCATTTATAACAATTTTT+TGG + chr8_4:1183647-1183666 None:intergenic 15.0%
!! AACTATGTTTAACAATAATT+GGG - chr8_4:1185036-1185055 Msa1306310:intron 15.0%
!!! GAAAATTTAAACAAATTTTG+AGG - chr8_4:1185290-1185309 Msa1306310:intron 15.0%
!!! TTTTTTGTTTATCATTTACT+TGG - chr8_4:1185912-1185931 Msa1306310:intron 15.0%
!! GGTAAGATATAAATAATAAT+AGG - chr8_4:1186039-1186058 Msa1306310:intron 15.0%
!! AAGATATAAATAATAATAGG+AGG - chr8_4:1186042-1186061 Msa1306310:intron 15.0%
!! AATTTAAATGAAGAAATGTA+AGG - chr8_4:1186264-1186283 Msa1306310:intron 15.0%
!! TATAAGAAAATAAATGAAGT+TGG - chr8_4:1187423-1187442 Msa1306310:three_prime_UTR 15.0%
!! GGATTATAAAAAAAAAAACA+CGG + chr8_4:1190729-1190748 None:intergenic 15.0%
!! AAACAAAAGACAAAAAAATT+AGG + chr8_4:1190832-1190851 None:intergenic 15.0%
!! ATGAAAAGAAAAAAAAAACA+CGG + chr8_4:1190978-1190997 None:intergenic 15.0%
!! TACAACAAAAAATTATAAGA+AGG - chr8_4:1191579-1191598 Msa1306310:intron 15.0%
!! TTGTAAAACAAATATTGATA+TGG - chr8_4:1192172-1192191 Msa1306310:intron 15.0%
!!! TCTTTTGTAGAATTTATATA+TGG - chr8_4:1192199-1192218 Msa1306310:intron 15.0%
!!! TAATATTTTCTTGTTATATC+TGG - chr8_4:1193091-1193110 Msa1306310:intron 15.0%
!! AATAAAAATTATAACAGAGA+TGG + chr8_4:1193587-1193606 None:intergenic 15.0%
!!! ATTCTTTTTAAGATGTAAAT+TGG - chr8_4:1193883-1193902 Msa1306310:intron 15.0%
!!! TGATTTTTTATATAGTTACA+TGG - chr8_4:1194807-1194826 Msa1306310:five_prime_UTR 15.0%
!!! TTCTTATTTTCTGTTTTTTG+TGG - chr8_4:1181107-1181126 Msa1306310:intron 20.0%
!!! TGTTAAGTGTGTTTTTATTT+TGG - chr8_4:1181252-1181271 Msa1306310:intron 20.0%
!! AAAAATGATTCAATGTAGTT+GGG - chr8_4:1181820-1181839 Msa1306310:three_prime_UTR 20.0%
!!! ATAAACATGCATGATTTTTT+GGG - chr8_4:1181887-1181906 Msa1306310:three_prime_UTR 20.0%
!! TTTGTAGTTGTCAATTATTA+TGG - chr8_4:1182282-1182301 Msa1306310:intron 20.0%
!!! GTCAATTATTATGGATATTT+TGG - chr8_4:1182291-1182310 Msa1306310:intron 20.0%
!!! CTGAATCATTATTAATTTTC+AGG - chr8_4:1183101-1183120 Msa1306310:three_prime_UTR 20.0%
!! AAAAGAGACAACATTAAAAA+AGG + chr8_4:1183398-1183417 None:intergenic 20.0%
!!! TCAAATTTTAAGGTGTTTTA+GGG + chr8_4:1183870-1183889 None:intergenic 20.0%
!!! TTAAAATTTGAGCTTTTACA+GGG - chr8_4:1183879-1183898 Msa1306310:intron 20.0%
!! ATAAAAGCAAATCATATGAT+TGG + chr8_4:1184581-1184600 None:intergenic 20.0%
!! GAACTATGTTTAACAATAAT+TGG - chr8_4:1185035-1185054 Msa1306310:intron 20.0%
!!! TCTTTTTTGCTTTCTATTTT+TGG - chr8_4:1185359-1185378 Msa1306310:intron 20.0%
!!! GATAGTTATATTTTCCTTTT+AGG - chr8_4:1185500-1185519 Msa1306310:intron 20.0%
!! AACAAAATAACAATGAAAAC+CGG + chr8_4:1185709-1185728 None:intergenic 20.0%
!!! TTTTTTCTCTTTGAATTTCA+AGG - chr8_4:1185945-1185964 Msa1306310:intron 20.0%
!! TATCAGTATCTGAATTAATA+TGG + chr8_4:1186175-1186194 None:intergenic 20.0%
!! CATTTCTTCATTTAAATTTC+TGG + chr8_4:1186262-1186281 None:intergenic 20.0%
!! AAGAAATACAAATCATCTAT+AGG + chr8_4:1186423-1186442 None:intergenic 20.0%
!! TTTGTATTTCTTATATTTCC+CGG - chr8_4:1186431-1186450 Msa1306310:intron 20.0%
!!! TTTAAAATATATCCATCTTG+AGG + chr8_4:1186946-1186965 None:intergenic 20.0%
!! AAAATTAATCCACTAATATG+TGG - chr8_4:1187735-1187754 Msa1306310:three_prime_UTR 20.0%
!!! GCTATTTCATTTATAATTGA+AGG + chr8_4:1188161-1188180 None:intergenic 20.0%
!! TTCAAAGCAAAATTTATAAC+CGG + chr8_4:1188437-1188456 None:intergenic 20.0%
!! AATAATTTCTTAGTGAATAG+TGG - chr8_4:1189018-1189037 Msa1306310:CDS 20.0%
!!! TATTTACACATTTTATCTTC+AGG - chr8_4:1189085-1189104 Msa1306310:CDS 20.0%
!! TATTTAAATGATTGTGATTG+TGG - chr8_4:1189167-1189186 Msa1306310:intron 20.0%
!! TATAAAAAAAACATCAATGC+TGG + chr8_4:1189670-1189689 None:intergenic 20.0%
!! AAAATTGATATAGACAAATC+AGG + chr8_4:1189779-1189798 None:intergenic 20.0%
!! AAATGTAATCAAACAAAACT+TGG + chr8_4:1189869-1189888 None:intergenic 20.0%
!!! TTTAAAATATTCTAGAGAGA+CGG + chr8_4:1190492-1190511 None:intergenic 20.0%
!! ACAAAAGACAAACAAAAATT+AGG + chr8_4:1190577-1190596 None:intergenic 20.0%
!!! TTTGTTTGTCTTTTGTTTTT+AGG - chr8_4:1190581-1190600 Msa1306310:intron 20.0%
!!! TTTAAAATATTCTAGAGAGA+CGG + chr8_4:1190492-1190511 None:intergenic 20.0%
!!! TTTTTGAGTGTTATAATGTT+AGG - chr8_4:1190849-1190868 Msa1306310:intron 20.0%
!!! TTATTGTGTTAAAATGCTTT+TGG - chr8_4:1191700-1191719 Msa1306310:intron 20.0%
!! ATTCAGTTCTCTTAAAAAAT+GGG + chr8_4:1191842-1191861 None:intergenic 20.0%
!! AATTCAGTTCTCTTAAAAAA+TGG + chr8_4:1191843-1191862 None:intergenic 20.0%
!! TCATTGAAAAATGAGTTTAA+AGG + chr8_4:1192985-1193004 None:intergenic 20.0%
!!! TTTTCAATGAACTATTTATC+TGG - chr8_4:1192995-1193014 Msa1306310:CDS 20.0%
!! TGCATATAAATAAAAGGAAT+GGG + chr8_4:1193796-1193815 None:intergenic 20.0%
!! ATGCATATAAATAAAAGGAA+TGG + chr8_4:1193797-1193816 None:intergenic 20.0%
!! TCAGAATGCATATAAATAAA+AGG + chr8_4:1193802-1193821 None:intergenic 20.0%
!! AAAAGAATATGAAATAGACA+TGG + chr8_4:1193871-1193890 None:intergenic 20.0%
!! AATGTAATTGCAAACAAATA+TGG + chr8_4:1193928-1193947 None:intergenic 20.0%
!!! CATATATTTTTGTCATAAAC+AGG - chr8_4:1194007-1194026 Msa1306310:intron 20.0%
!! ATTAACCCAAATTATATTTG+CGG + chr8_4:1194050-1194069 None:intergenic 20.0%
! AGAACAAAAAAACGCAAAAT+GGG + chr8_4:1181091-1181110 None:intergenic 25.0%
! AAGAACAAAAAAACGCAAAA+TGG + chr8_4:1181092-1181111 None:intergenic 25.0%
!!! TTTCTGTTTTTTGTGGTTTT+AGG - chr8_4:1181114-1181133 Msa1306310:intron 25.0%
!!! TTCTGTTTTTTGTGGTTTTA+GGG - chr8_4:1181115-1181134 Msa1306310:intron 25.0%
! TCGTTGAAAATCATCATTTA+AGG - chr8_4:1181303-1181322 Msa1306310:intron 25.0%
! CGTTGAAAATCATCATTTAA+GGG - chr8_4:1181304-1181323 Msa1306310:intron 25.0%
! GAAAAATGATTCAATGTAGT+TGG - chr8_4:1181819-1181838 Msa1306310:three_prime_UTR 25.0%
! AAAATGATTCAATGTAGTTG+GGG - chr8_4:1181821-1181840 Msa1306310:three_prime_UTR 25.0%
!!! GATAAACATGCATGATTTTT+TGG - chr8_4:1181886-1181905 Msa1306310:three_prime_UTR 25.0%
!!! ACTTTGTGTTTTCTAAGAAA+TGG - chr8_4:1181920-1181939 Msa1306310:three_prime_UTR 25.0%
! ATATTATTCAAGTGCTTTGA+TGG - chr8_4:1182122-1182141 Msa1306310:intron 25.0%
! ATTCTACAAGAGAAACTATT+AGG - chr8_4:1182380-1182399 Msa1306310:intron 25.0%
! AGAAACTATTAGGAAAGATT+TGG - chr8_4:1182390-1182409 Msa1306310:intron 25.0%
! TTCCATCATAAACCATATTT+CGG + chr8_4:1182432-1182451 None:intergenic 25.0%
! ACATAATGCTTACAATTTCA+TGG + chr8_4:1182780-1182799 None:intergenic 25.0%
!! AACTTTTGAATGATGTTTAG+TGG - chr8_4:1183286-1183305 Msa1306310:intron 25.0%
!!! TTTTTTATTTCCACAATGAC+TGG + chr8_4:1183611-1183630 None:intergenic 25.0%
! TTATAAATGAGTGTACATGT+GGG - chr8_4:1183655-1183674 Msa1306310:intron 25.0%
!!! CTCAAATTTTAAGGTGTTTT+AGG + chr8_4:1183871-1183890 None:intergenic 25.0%
!! CTGTAAAAGCTCAAATTTTA+AGG + chr8_4:1183880-1183899 None:intergenic 25.0%
!! CTTAAAATTTGAGCTTTTAC+AGG - chr8_4:1183878-1183897 Msa1306310:intron 25.0%
! TTTATTAATTCAGATCCACT+AGG - chr8_4:1184028-1184047 Msa1306310:intron 25.0%
! CAGGAATTACTATACAATTT+AGG + chr8_4:1184134-1184153 None:intergenic 25.0%
!!! CATTAGATTTTGATACAAGA+AGG - chr8_4:1184167-1184186 Msa1306310:three_prime_UTR 25.0%
! TAAATCCTAAAGTATACCAT+CGG + chr8_4:1184811-1184830 None:intergenic 25.0%
! TTATAAATCATTGCCCTTAT+CGG + chr8_4:1184966-1184985 None:intergenic 25.0%
!! GCATATCTAAACATGTATTT+TGG - chr8_4:1185058-1185077 Msa1306310:intron 25.0%
! ATCCTAAATATGATTGTGAT+GGG + chr8_4:1185193-1185212 None:intergenic 25.0%
! AATCTTGTGCCAAAAAAAAT+TGG + chr8_4:1185235-1185254 None:intergenic 25.0%
!!! AATTTTTTTTGGCACAAGAT+TGG - chr8_4:1185234-1185253 Msa1306310:intron 25.0%
!! TATCATACCTTGTTATAGAA+CGG - chr8_4:1185442-1185461 Msa1306310:intron 25.0%
!! TATTTTCATATTAGTGTCCA+AGG - chr8_4:1185472-1185491 Msa1306310:intron 25.0%
! AATATAACTATCATGAACCT+TGG + chr8_4:1185492-1185511 None:intergenic 25.0%
!!! ATAGCCATATTTTTCTAGAA+AGG + chr8_4:1185631-1185650 None:intergenic 25.0%
! CATATAAAAGCCAGAAAAAA+GGG + chr8_4:1185779-1185798 None:intergenic 25.0%
! TCATATAAAAGCCAGAAAAA+AGG + chr8_4:1185780-1185799 None:intergenic 25.0%
! AATTGAAGCAATCCATATAT+AGG - chr8_4:1185859-1185878 Msa1306310:intron 25.0%
! AATTGATCATCCTCTTTATT+CGG - chr8_4:1185989-1186008 Msa1306310:intron 25.0%
! TAAAACATTTCCGAATAAAG+AGG + chr8_4:1186002-1186021 None:intergenic 25.0%
!! CAGATACTGATAATGAATTA+TGG - chr8_4:1186183-1186202 Msa1306310:intron 25.0%
! TTGTATTTCTTATATTTCCC+GGG - chr8_4:1186432-1186451 Msa1306310:intron 25.0%
! TTTAGAAGGATCAATTTATG+AGG - chr8_4:1186531-1186550 Msa1306310:intron 25.0%
! ATAAATCAGAATCTAATGAC+AGG + chr8_4:1186832-1186851 None:intergenic 25.0%
! AATTGAAGGTAAAATATCTC+TGG + chr8_4:1188147-1188166 None:intergenic 25.0%
!! AATATGTTTTCCATCAGAAA+GGG + chr8_4:1188245-1188264 None:intergenic 25.0%
!! AAATATGTTTTCCATCAGAA+AGG + chr8_4:1188246-1188265 None:intergenic 25.0%
!!! ATTCAACAAATTGGCTTTTT+AGG - chr8_4:1188515-1188534 Msa1306310:three_prime_UTR 25.0%
! ACATAAACAATCACAAATCT+AGG - chr8_4:1189620-1189639 Msa1306310:intron 25.0%
! TGTTAACAGAATAAGTGAAT+TGG + chr8_4:1189803-1189822 None:intergenic 25.0%
!! ATTCTGTTAACATTCGATTT+TGG - chr8_4:1189811-1189830 Msa1306310:intron 25.0%
!! TTCTGTTAACATTCGATTTT+GGG - chr8_4:1189812-1189831 Msa1306310:intron 25.0%
!! TTTATGATGAACCATTTTCT+GGG - chr8_4:1189912-1189931 Msa1306310:intron 25.0%
!! TAAAAGGCTAAGCTTTTAAA+TGG - chr8_4:1189949-1189968 Msa1306310:intron 25.0%
! AAGTATGTCACTACATATAA+GGG + chr8_4:1190082-1190101 None:intergenic 25.0%
! ATCAAATTACAAAGAGGATA+TGG + chr8_4:1190106-1190125 None:intergenic 25.0%
!!! TATCGTATTGGTTTAATGTT+AGG - chr8_4:1190638-1190657 Msa1306310:intron 25.0%
!!! TATCGTATTGGTTTAATGTT+AGG - chr8_4:1190638-1190657 Msa1306310:intron 25.0%
!! TTGAAGATCTGAAATTGATA+AGG - chr8_4:1191036-1191055 Msa1306310:intron 25.0%
!!! GAAACTAGCTTTATATTGAA+AGG - chr8_4:1191263-1191282 Msa1306310:intron 25.0%
! TGAACTGAGTTTAATAACAT+TGG - chr8_4:1191504-1191523 Msa1306310:intron 25.0%
!!! ATTGATTTATCATTTTGAGC+AGG - chr8_4:1191725-1191744 Msa1306310:intron 25.0%
! TAAAGGAATTAAGTTTCTCT+TGG + chr8_4:1191800-1191819 None:intergenic 25.0%
! AGAAACTTAATTCCTTTAGT+CGG - chr8_4:1191802-1191821 Msa1306310:intron 25.0%
! TTCAGTTCTCTTAAAAAATG+GGG + chr8_4:1191841-1191860 None:intergenic 25.0%
!! AGAGAACTGAATTAATTTTC+AGG - chr8_4:1191850-1191869 Msa1306310:intron 25.0%
! CAGTGAATCAAAAATGTATA+TGG + chr8_4:1191892-1191911 None:intergenic 25.0%
! TGATTCTTAATTGTAGTCAT+AGG - chr8_4:1191964-1191983 Msa1306310:intron 25.0%
!!! AACAGCTTCTATTTCTATTA+TGG + chr8_4:1192261-1192280 None:intergenic 25.0%
!!! AGGCAATATAATGTGTTTTT+TGG + chr8_4:1192644-1192663 None:intergenic 25.0%
!!! TTTGTTTTCCTCTTGTTTTT+GGG + chr8_4:1192667-1192686 None:intergenic 25.0%
!!! ATTTGTTTTCCTCTTGTTTT+TGG + chr8_4:1192668-1192687 None:intergenic 25.0%
! GTATTGTTAAATCGATACAT+GGG - chr8_4:1193017-1193036 Msa1306310:CDS 25.0%
! TATTGTTAAATCGATACATG+GGG - chr8_4:1193018-1193037 Msa1306310:CDS 25.0%
!! AAGGATAAAAAGGACATTTT+AGG - chr8_4:1193052-1193071 Msa1306310:CDS 25.0%
!!! ATGGAAAAACAATTTTGGTT+AGG + chr8_4:1193258-1193277 None:intergenic 25.0%
!! AGCAAATGGAAAAACAATTT+TGG + chr8_4:1193263-1193282 None:intergenic 25.0%
! GATTATTGTGAATCAAATCT+TGG + chr8_4:1193440-1193459 None:intergenic 25.0%
! ATATTGCAATACAGATCATA+AGG + chr8_4:1193679-1193698 None:intergenic 25.0%
! GCATATAAATAAAAGGAATG+GGG + chr8_4:1193795-1193814 None:intergenic 25.0%
!!! TTTGCAATTACATTTGTTGT+TGG - chr8_4:1193934-1193953 Msa1306310:intron 25.0%
!! AATATAATTTGGGTTAATCC+TGG - chr8_4:1194052-1194071 Msa1306310:intron 25.0%
! TAATTCACCATTAGAAGATT+TGG + chr8_4:1194104-1194123 None:intergenic 25.0%
!! TAATTCCTGAATTTGCTTAA+TGG + chr8_4:1194248-1194267 None:intergenic 25.0%
! CAAAATCAGCTTATAAGATA+AGG + chr8_4:1194605-1194624 None:intergenic 25.0%
!!! TATCTTATAAGCTGATTTTG+TGG - chr8_4:1194605-1194624 Msa1306310:intron 25.0%
!! TGATTTTGTGGAGTTTAATT+TGG - chr8_4:1194617-1194636 Msa1306310:intron 25.0%
!!! AAACTCAGTTTTTAGGATAT+GGG + chr8_4:1194643-1194662 None:intergenic 25.0%
!!! AAAACTCAGTTTTTAGGATA+TGG + chr8_4:1194644-1194663 None:intergenic 25.0%
!! AATCAGAAAACTCAGTTTTT+AGG + chr8_4:1194650-1194669 None:intergenic 25.0%
!! AAACTGAGTTTTCTGATTTT+TGG - chr8_4:1194652-1194671 Msa1306310:intron 25.0%
! AATATACGTATTATGAGACA+AGG + chr8_4:1194852-1194871 None:intergenic 25.0%
!!! TTTTTCGACCAAAAAAACTA+TGG - chr8_4:1194989-1195008 Msa1306310:five_prime_UTR 25.0%
!!! AATCATAGCCATAGTTTTTT+TGG + chr8_4:1195000-1195019 None:intergenic 25.0%
!!! AATTTGGTTGGTTTTAATAC+AGG - chr8_4:1195223-1195242 Msa1306310:five_prime_UTR 25.0%
AGACAGTGAAAAACAAACAA+CGG + chr8_4:1180915-1180934 None:intergenic 30.0%
!! TTGTTTGTTTTTCACTGTCT+AGG - chr8_4:1180915-1180934 Msa1306310:intron 30.0%
!! TGTTTGTTTTTCACTGTCTA+GGG - chr8_4:1180916-1180935 Msa1306310:intron 30.0%
! TTTTCCGAAATTAATCTCTG+AGG - chr8_4:1181170-1181189 Msa1306310:intron 30.0%
CTTACCTCAGAGATTAATTT+CGG + chr8_4:1181177-1181196 None:intergenic 30.0%
GTGAATTCTTAGTGTATGTT+TGG - chr8_4:1181446-1181465 Msa1306310:intron 30.0%
! AAGCTACAAAATGTAGCTTT+TGG - chr8_4:1181568-1181587 Msa1306310:intron 30.0%
!! AGCTTTTGGAAAATCACAAT+TGG - chr8_4:1181582-1181601 Msa1306310:intron 30.0%
ATGTTTGGTATCAAGATGTT+CGG - chr8_4:1181697-1181716 Msa1306310:three_prime_UTR 30.0%
ATTTAACCCAACTCCTTAAA+TGG + chr8_4:1181863-1181882 None:intergenic 30.0%
!!! ATGCATGATTTTTTGGGTTA+GGG - chr8_4:1181893-1181912 Msa1306310:three_prime_UTR 30.0%
ACCAATTAGTACCCTAATTA+AGG - chr8_4:1181966-1181985 Msa1306310:intron 30.0%
CCAATTAGTACCCTAATTAA+GGG - chr8_4:1181967-1181986 Msa1306310:intron 30.0%
!! ACAAAAGTGTCCCTTAATTA+GGG + chr8_4:1181980-1181999 None:intergenic 30.0%
!! AACAAAAGTGTCCCTTAATT+AGG + chr8_4:1181981-1182000 None:intergenic 30.0%
!!! TAAGGGACACTTTTGTTATT+CGG - chr8_4:1181984-1182003 Msa1306310:intron 30.0%
AGATAATCTCGTATCTGTAA+TGG - chr8_4:1182007-1182026 Msa1306310:intron 30.0%
TATTTGTTTGTGCTGTCTTT+GGG - chr8_4:1182321-1182340 Msa1306310:intron 30.0%
TAATGAGTTAGACCGAAATA+TGG - chr8_4:1182417-1182436 Msa1306310:intron 30.0%
! TGGTTTATGATGGAACATTA+TGG - chr8_4:1182437-1182456 Msa1306310:intron 30.0%
TCATTGGAACAGAAAATTAC+TGG + chr8_4:1182570-1182589 None:intergenic 30.0%
CATGATTATGAGTTATCTGT+TGG - chr8_4:1182652-1182671 Msa1306310:intron 30.0%
! ATTTACCAAGGTATTCATCA+TGG - chr8_4:1182687-1182706 Msa1306310:intron 30.0%
! GATGCAGTACTCTAAAAAAA+AGG + chr8_4:1182897-1182916 None:intergenic 30.0%
TTCCTTTATTGTCATTCTGA+TGG - chr8_4:1183050-1183069 Msa1306310:three_prime_UTR 30.0%
TTCCATCAGAATGACAATAA+AGG + chr8_4:1183055-1183074 None:intergenic 30.0%
!! TATTAATTTTCAGGCCACTT+TGG - chr8_4:1183110-1183129 Msa1306310:three_prime_UTR 30.0%
GAAGTTCAATATATCCAAAG+TGG + chr8_4:1183127-1183146 None:intergenic 30.0%
! TTTTCTTCAACTCAGTAACA+TGG + chr8_4:1183172-1183191 None:intergenic 30.0%
! TCAAACCAGAAAAAACCTTT+TGG - chr8_4:1183454-1183473 Msa1306310:intron 30.0%
! CAAACCAGAAAAAACCTTTT+GGG - chr8_4:1183455-1183474 Msa1306310:intron 30.0%
GTTATAAATGAGTGTACATG+TGG - chr8_4:1183654-1183673 Msa1306310:intron 30.0%
TCATATTACATTGACCAAAC+AGG - chr8_4:1184085-1184104 Msa1306310:intron 30.0%
CATATTACATTGACCAAACA+GGG - chr8_4:1184086-1184105 Msa1306310:intron 30.0%
TATAGTAATTCCTGCTTTCA+TGG - chr8_4:1184140-1184159 Msa1306310:three_prime_UTR 30.0%
!! TCAAACACAATGGATTAAGA+AGG + chr8_4:1184199-1184218 None:intergenic 30.0%
! AAGTCTAGTTCAACAAACTA+AGG + chr8_4:1184384-1184403 None:intergenic 30.0%
CATTGATAAATAGATTGCTG+TGG - chr8_4:1184406-1184425 Msa1306310:intron 30.0%
ATATTTAGAGGGTCATACTA+AGG - chr8_4:1184665-1184684 Msa1306310:intron 30.0%
TATTTAGAGGGTCATACTAA+GGG - chr8_4:1184666-1184685 Msa1306310:intron 30.0%
! ATAGAAATAGTGCTGGAAAA+TGG + chr8_4:1184768-1184787 None:intergenic 30.0%
AAATCCTAAAGTATACCATC+GGG + chr8_4:1184810-1184829 None:intergenic 30.0%
TCTCAGATGCTATCTAAATA+TGG + chr8_4:1184834-1184853 None:intergenic 30.0%
TGTCATGTATATAGTTGATC+AGG - chr8_4:1184893-1184912 Msa1306310:intron 30.0%
GTCATGTATATAGTTGATCA+GGG - chr8_4:1184894-1184913 Msa1306310:intron 30.0%
!! GTATTTAAAAGTGCCAAGAT+AGG - chr8_4:1185108-1185127 Msa1306310:intron 30.0%
AACCCATCACAATCATATTT+AGG - chr8_4:1185188-1185207 Msa1306310:intron 30.0%
GATCCTAAATATGATTGTGA+TGG + chr8_4:1185194-1185213 None:intergenic 30.0%
!!! AGGTGCTTTGTTTTTTTCAT+TGG - chr8_4:1185310-1185329 Msa1306310:intron 30.0%
ATTTGTTCTTACCCATTTCT+TGG - chr8_4:1185400-1185419 Msa1306310:intron 30.0%
! TGGACCTTTCTAGAAAAATA+TGG - chr8_4:1185624-1185643 Msa1306310:three_prime_UTR 30.0%
AAAAATATGGCTATCGCTAT+GGG - chr8_4:1185637-1185656 Msa1306310:three_prime_UTR 30.0%
CAATGAAAGATGCCTATATA+TGG + chr8_4:1185874-1185893 None:intergenic 30.0%
GTTTATCATTTACTTGGAGT+TGG - chr8_4:1185918-1185937 Msa1306310:intron 30.0%
AAAGAGGATGATCAATTACT+GGG + chr8_4:1185986-1186005 None:intergenic 30.0%
TAAAGAGGATGATCAATTAC+TGG + chr8_4:1185987-1186006 None:intergenic 30.0%
!!! GGAAATGTTTTAGTTAGTGT+GGG - chr8_4:1186010-1186029 Msa1306310:intron 30.0%
ATCTGAATTAATATGGTCTC+AGG + chr8_4:1186168-1186187 None:intergenic 30.0%
AGATTGTAATACTGTAACAG+CGG + chr8_4:1186227-1186246 None:intergenic 30.0%
TACAAATCATCTATAGGACA+TGG + chr8_4:1186417-1186436 None:intergenic 30.0%
!! AAAGAATGCGTTGACTATTA+GGG + chr8_4:1186512-1186531 None:intergenic 30.0%
!! AAAAGAATGCGTTGACTATT+AGG + chr8_4:1186513-1186532 None:intergenic 30.0%
! CAATTTATGAGGCATTCAAA+TGG - chr8_4:1186542-1186561 Msa1306310:intron 30.0%
!! ATGCTTATGTTTTTACGTTC+CGG - chr8_4:1186800-1186819 Msa1306310:three_prime_UTR 30.0%
TTATATGTCAAATGTCTACC+AGG - chr8_4:1186855-1186874 Msa1306310:three_prime_UTR 30.0%
! AGTTTCTTCTTTGTTTCTTG+AGG + chr8_4:1186904-1186923 None:intergenic 30.0%
AGAAACAAAGAAGAAACTTG+CGG - chr8_4:1186906-1186925 Msa1306310:intron 30.0%
!! CAATTTTCTGAGAATTGTCA+AGG + chr8_4:1187134-1187153 None:intergenic 30.0%
CAATTCTCAGAAAATTGCTT+AGG - chr8_4:1187137-1187156 Msa1306310:three_prime_UTR 30.0%
!!! TGCCTCAATTTTTTTTAGCA+AGG - chr8_4:1188181-1188200 Msa1306310:three_prime_UTR 30.0%
!!! GCCTCAATTTTTTTTAGCAA+GGG - chr8_4:1188182-1188201 Msa1306310:three_prime_UTR 30.0%
ACCCTTGCTAAAAAAAATTG+AGG + chr8_4:1188186-1188205 None:intergenic 30.0%
! TACAAGACTTTTCAATATCC+AGG - chr8_4:1188288-1188307 Msa1306310:three_prime_UTR 30.0%
! ACAAGACTTTTCAATATCCA+GGG - chr8_4:1188289-1188308 Msa1306310:three_prime_UTR 30.0%
CAGTGAAAAGGGTTATAAAT+AGG - chr8_4:1188312-1188331 Msa1306310:three_prime_UTR 30.0%
CATTCAAGATATTGAACTTC+CGG - chr8_4:1188415-1188434 Msa1306310:three_prime_UTR 30.0%
GACAAGGTAATTCAACAAAT+TGG - chr8_4:1188506-1188525 Msa1306310:three_prime_UTR 30.0%
!!! AGAGGAAAGTTTTATTCCAA+GGG - chr8_4:1188554-1188573 Msa1306310:three_prime_UTR 30.0%
!!! AAAGTTTTATTCCAAGGGAT+TGG - chr8_4:1188559-1188578 Msa1306310:exon 30.0%
! ATTGAAGTGTTTCTATGACA+AGG - chr8_4:1188607-1188626 Msa1306310:CDS 30.0%
TTTAGATCCATATGAAGAGT+TGG - chr8_4:1188682-1188701 Msa1306310:CDS 30.0%
CATAGCAAATAACAACATCA+CGG + chr8_4:1188799-1188818 None:intergenic 30.0%
!! GATGTTGTTATTTGCTATGA+TGG - chr8_4:1188800-1188819 Msa1306310:CDS 30.0%
ATTGTATGCCATATTCAAAC+TGG + chr8_4:1188859-1188878 None:intergenic 30.0%
TTTGAATATGGCATACAATC+TGG - chr8_4:1188860-1188879 Msa1306310:intron 30.0%
AAAATTACACGACGATCATT+TGG + chr8_4:1189146-1189165 None:intergenic 30.0%
TAAATGATTGTGATTGTGGA+AGG - chr8_4:1189171-1189190 Msa1306310:intron 30.0%
TATTACTGTACTAGTGTTAC+TGG + chr8_4:1189397-1189416 None:intergenic 30.0%
GAAAAGTTACAAATGATCAC+TGG - chr8_4:1189453-1189472 Msa1306310:intron 30.0%
TTTCAGTATGGCAGTTATTA+GGG + chr8_4:1189500-1189519 None:intergenic 30.0%
AATTAAACTGAGTAGGGAAA+TGG + chr8_4:1189546-1189565 None:intergenic 30.0%
GTGTCTAATTAAACTGAGTA+GGG + chr8_4:1189552-1189571 None:intergenic 30.0%
TGTGTCTAATTAAACTGAGT+AGG + chr8_4:1189553-1189572 None:intergenic 30.0%
AGTTTAATTAGACACACAGA+TGG - chr8_4:1189557-1189576 Msa1306310:intron 30.0%
GTTTAATTAGACACACAGAT+GGG - chr8_4:1189558-1189577 Msa1306310:intron 30.0%
AGTTACAACAAAAGACAAAC+TGG - chr8_4:1189582-1189601 Msa1306310:intron 30.0%
TCTAATTAAGCAAACTCATG+AGG + chr8_4:1189701-1189720 None:intergenic 30.0%
! TCATGAGTTTGCTTAATTAG+AGG - chr8_4:1189700-1189719 Msa1306310:intron 30.0%
! ATGGATTAACCATGGTTAAT+TGG - chr8_4:1189735-1189754 Msa1306310:intron 30.0%
ACAAAGTAACCAATTAACCA+TGG + chr8_4:1189747-1189766 None:intergenic 30.0%
! TCTGTTAACATTCGATTTTG+GGG - chr8_4:1189813-1189832 Msa1306310:intron 30.0%
AATCAAACAAAACTTGGAGA+AGG + chr8_4:1189863-1189882 None:intergenic 30.0%
! GTTTATGATGAACCATTTTC+TGG - chr8_4:1189911-1189930 Msa1306310:intron 30.0%
TACAAAGACAAAACCATTCA+TGG + chr8_4:1189983-1190002 None:intergenic 30.0%
TCATATCAGCATAAACTAAG+AGG + chr8_4:1190058-1190077 None:intergenic 30.0%
CAAGTATGTCACTACATATA+AGG + chr8_4:1190083-1190102 None:intergenic 30.0%
ACACAGATCAAATTACAAAG+AGG + chr8_4:1190112-1190131 None:intergenic 30.0%
AATGAAAACAAAACATGCAG+AGG + chr8_4:1190516-1190535 None:intergenic 30.0%
TTTCATTATCAGATATGCAG+TGG - chr8_4:1190529-1190548 Msa1306310:intron 30.0%
TTCATTATCAGATATGCAGT+GGG - chr8_4:1190530-1190549 Msa1306310:intron 30.0%
!! TAGGAGAGTGTTATAATGTT+AGG - chr8_4:1190600-1190619 Msa1306310:intron 30.0%
AACCAATACGATATCAAATG+TGG + chr8_4:1190631-1190650 None:intergenic 30.0%
TAATGAAACAAAACATGCAG+AGG + chr8_4:1190774-1190793 None:intergenic 30.0%
TTTCATTATCAGATATGCAG+TGG - chr8_4:1190529-1190548 Msa1306310:intron 30.0%
TTCATTATCAGATATGCAGT+GGG - chr8_4:1190530-1190549 Msa1306310:intron 30.0%
AACCAATACGATATCAAATG+TGG + chr8_4:1190631-1190650 None:intergenic 30.0%
GAGATCGATGGATATAAAAA+GGG - chr8_4:1191058-1191077 Msa1306310:intron 30.0%
! TTTGAGATATGAGAATGTTG+TGG - chr8_4:1191128-1191147 Msa1306310:intron 30.0%
AGTTTCTAATTGACCAGTTT+AGG + chr8_4:1191249-1191268 None:intergenic 30.0%
TGGTAAAGATATTACTCTGT+TGG - chr8_4:1191327-1191346 Msa1306310:intron 30.0%
! TTGTATGTTTTGTGCTAGAT+TGG - chr8_4:1191425-1191444 Msa1306310:CDS 30.0%
!! ATAACATTGGTTGATAGTGA+AGG - chr8_4:1191517-1191536 Msa1306310:intron 30.0%
! TAAGTTTCTCTTGGCATTTT+TGG + chr8_4:1191791-1191810 None:intergenic 30.0%
CTTGAAGTAATTAATTGCTC+TGG - chr8_4:1191938-1191957 Msa1306310:intron 30.0%
TTAGTATCAAAAAGCCAATC+AGG - chr8_4:1192005-1192024 Msa1306310:intron 30.0%
! GATGTTCTTTGTTACTTGTT+TGG - chr8_4:1192065-1192084 Msa1306310:intron 30.0%
TCCATTCCATGTAAAAACTA+TGG - chr8_4:1192417-1192436 Msa1306310:intron 30.0%
! ACCATAGTTTTTACATGGAA+TGG + chr8_4:1192421-1192440 None:intergenic 30.0%
AGAAGGAAAAATAGACAAGA+CGG + chr8_4:1192830-1192849 None:intergenic 30.0%
!! TGATTGTTTCTAACAGAACT+GGG + chr8_4:1192949-1192968 None:intergenic 30.0%
!! ATGATTGTTTCTAACAGAAC+TGG + chr8_4:1192950-1192969 None:intergenic 30.0%
GAGTTTAAAGGAAAATACCT+TGG + chr8_4:1192973-1192992 None:intergenic 30.0%
GGTATTGTTAAATCGATACA+TGG - chr8_4:1193016-1193035 Msa1306310:CDS 30.0%
TTAGATAGGGAAGGATAAAA+AGG - chr8_4:1193042-1193061 Msa1306310:CDS 30.0%
TATCTGGTAGAAACTGTTAA+TGG - chr8_4:1193107-1193126 Msa1306310:intron 30.0%
TCATTTAGTTATTGAGACTC+AGG + chr8_4:1193766-1193785 None:intergenic 30.0%
ATAAATAAAAGGAATGGGGA+GGG + chr8_4:1193791-1193810 None:intergenic 30.0%
TATAAATAAAAGGAATGGGG+AGG + chr8_4:1193792-1193811 None:intergenic 30.0%
TTAAGAAATGTTAGAGTCGT+GGG + chr8_4:1193825-1193844 None:intergenic 30.0%
CTAACATTTCTTAACTAGTG+AGG - chr8_4:1193831-1193850 Msa1306310:intron 30.0%
! ATATGGACTACAAAGAAAGT+TGG + chr8_4:1193911-1193930 None:intergenic 30.0%
TCAGTTCCGCAAATATAATT+TGG - chr8_4:1194041-1194060 Msa1306310:intron 30.0%
CAGTTCCGCAAATATAATTT+GGG - chr8_4:1194042-1194061 Msa1306310:intron 30.0%
AAAGAAGCTGTTAAACAAAG+TGG - chr8_4:1194145-1194164 Msa1306310:intron 30.0%
GTATCAATCAAATGAAGAAC+AGG + chr8_4:1194205-1194224 None:intergenic 30.0%
! GAATTTGCTTAATGGCATAA+GGG + chr8_4:1194240-1194259 None:intergenic 30.0%
! TGAATTTGCTTAATGGCATA+AGG + chr8_4:1194241-1194260 None:intergenic 30.0%
TTATGCCATTAAGCAAATTC+AGG - chr8_4:1194240-1194259 Msa1306310:intron 30.0%
TAAGCAAATTCAGGAATTAC+TGG - chr8_4:1194249-1194268 Msa1306310:intron 30.0%
AAGCAAATTCAGGAATTACT+GGG - chr8_4:1194250-1194269 Msa1306310:intron 30.0%
TGCAAAAAAGTTGACAAACT+AGG - chr8_4:1194676-1194695 Msa1306310:intron 30.0%
AAATCAAGCTTCAGCATAAA+TGG + chr8_4:1194793-1194812 None:intergenic 30.0%
AAAATATCACAAGAGACAAG+AGG + chr8_4:1194973-1194992 None:intergenic 30.0%
TAACTAGTAGACTAAGATCA+AGG + chr8_4:1195056-1195075 None:intergenic 30.0%
TTGAAAAAAAGCTGAGAGAG+TGG + chr8_4:1180747-1180766 None:intergenic 35.0%
TTGATCGTTGTTGAGAAAAG+CGG + chr8_4:1180772-1180791 None:intergenic 35.0%
ACGAAGAAGTTCGTTTAAGT+TGG + chr8_4:1180954-1180973 None:intergenic 35.0%
AAATCGAAGTAACTAACCGT+AGG + chr8_4:1181002-1181021 None:intergenic 35.0%
!! GCTTTGTTCAATGTTCGTTT+TGG - chr8_4:1181063-1181082 Msa1306310:intron 35.0%
!! TAATCTCTGAGGTAAGAAAC+AGG - chr8_4:1181181-1181200 Msa1306310:intron 35.0%
AAAGCTACAAAGTGCATGTT+TGG - chr8_4:1181515-1181534 Msa1306310:intron 35.0%
AAAGTGCATGTTTGGTATCT+CGG - chr8_4:1181523-1181542 Msa1306310:intron 35.0%
TTGTAGCTTCTGCAAAATGA+TGG + chr8_4:1181557-1181576 None:intergenic 35.0%
TCATCGTGATACCAAAACAT+AGG - chr8_4:1181605-1181624 Msa1306310:intron 35.0%
! TTTTGGCAAAGCCTATGTTT+TGG + chr8_4:1181619-1181638 None:intergenic 35.0%
GTTTGGATTTACAGTGAGTT+TGG + chr8_4:1181666-1181685 None:intergenic 35.0%
TGTAAATCCAAACATGCACT+TGG - chr8_4:1181673-1181692 Msa1306310:intron 35.0%
AAACATACCAAGTGCATGTT+TGG + chr8_4:1181683-1181702 None:intergenic 35.0%
AAACATGCACTTGGTATGTT+TGG - chr8_4:1181682-1181701 Msa1306310:intron 35.0%
! TACCTTTTTCCAGCCATTTA+AGG - chr8_4:1181847-1181866 Msa1306310:three_prime_UTR 35.0%
!!! CATGCATGATTTTTTGGGTT+AGG - chr8_4:1181892-1181911 Msa1306310:three_prime_UTR 35.0%
! CCCTTAATTAGGGTACTAAT+TGG + chr8_4:1181970-1181989 None:intergenic 35.0%
TTGAACACACAGTTTCTGTT+TGG - chr8_4:1182089-1182108 Msa1306310:intron 35.0%
! TTCAAGTGCTTTGATGGTTA+TGG - chr8_4:1182128-1182147 Msa1306310:intron 35.0%
! TCAAGTGCTTTGATGGTTAT+GGG - chr8_4:1182129-1182148 Msa1306310:intron 35.0%
TTGATGTATGACTTCTGAAC+TGG - chr8_4:1182152-1182171 Msa1306310:intron 35.0%
GACAACTACAAATGTCTGAA+AGG + chr8_4:1182274-1182293 None:intergenic 35.0%
GTATTTGTTTGTGCTGTCTT+TGG - chr8_4:1182320-1182339 Msa1306310:intron 35.0%
ATTTGTTTGTGCTGTCTTTG+GGG - chr8_4:1182322-1182341 Msa1306310:intron 35.0%
GACCGAAATATGGTTTATGA+TGG - chr8_4:1182427-1182446 Msa1306310:intron 35.0%
GAATTCAACAACAACAACCA+AGG + chr8_4:1182505-1182524 None:intergenic 35.0%
CAGAAAATTACTGGAAAGGT+TGG + chr8_4:1182561-1182580 None:intergenic 35.0%
GGAACAGAAAATTACTGGAA+AGG + chr8_4:1182565-1182584 None:intergenic 35.0%
ATTATGAGTTATCTGTTGGC+AGG - chr8_4:1182656-1182675 Msa1306310:intron 35.0%
ATCTTCCATGATGAATACCT+TGG + chr8_4:1182695-1182714 None:intergenic 35.0%
CTAGGATGATAAATAGGAAC+TGG + chr8_4:1183149-1183168 None:intergenic 35.0%
ACATGGCTAGGATGATAAAT+AGG + chr8_4:1183155-1183174 None:intergenic 35.0%
! AAACCAAGGTATCACTGAAA+AGG - chr8_4:1183231-1183250 Msa1306310:intron 35.0%
! ATTCCTTTTCAGTGATACCT+TGG + chr8_4:1183237-1183256 None:intergenic 35.0%
AAGCACAAAAGACATTTGTG+TGG + chr8_4:1183435-1183454 None:intergenic 35.0%
!!! CATACCCAAAAGGTTTTTTC+TGG + chr8_4:1183462-1183481 None:intergenic 35.0%
!! AAAAACCTTTTGGGTATGAG+TGG - chr8_4:1183464-1183483 Msa1306310:intron 35.0%
!! AAAACCTTTTGGGTATGAGT+GGG - chr8_4:1183465-1183484 Msa1306310:intron 35.0%
! TTAGTTGTGGTTTGCAGAAT+AGG + chr8_4:1183549-1183568 None:intergenic 35.0%
AAAATGAGACCACTTAGTTG+TGG + chr8_4:1183562-1183581 None:intergenic 35.0%
TTCTTATACTCCAGTCATTG+TGG - chr8_4:1183598-1183617 Msa1306310:intron 35.0%
TGCAAAACACAGAAAAACGA+AGG + chr8_4:1183993-1184012 None:intergenic 35.0%
TAATTCAGATCCACTAGGAA+AGG - chr8_4:1184033-1184052 Msa1306310:intron 35.0%
TCCATTGTGTTTGATCTTAC+TGG - chr8_4:1184205-1184224 Msa1306310:three_prime_UTR 35.0%
!!! GAAGGCATTTTCTCTGTAAT+AGG - chr8_4:1184236-1184255 Msa1306310:intron 35.0%
TGAAACTCTTTCTCTGATAC+TGG - chr8_4:1184475-1184494 Msa1306310:intron 35.0%
! ATTATTATCTCCTTGCTGTG+AGG - chr8_4:1184545-1184564 Msa1306310:intron 35.0%
TGAGTCTGAAGGATATTTAG+AGG - chr8_4:1184653-1184672 Msa1306310:intron 35.0%
GAGTCTGAAGGATATTTAGA+GGG - chr8_4:1184654-1184673 Msa1306310:intron 35.0%
AATCCTAAAGTATACCATCG+GGG + chr8_4:1184809-1184828 None:intergenic 35.0%
AAAGCTGATGATTCTAGTAG+TGG + chr8_4:1184942-1184961 None:intergenic 35.0%
! AATCATCAGCTTTTCCGATA+AGG - chr8_4:1184949-1184968 Msa1306310:intron 35.0%
! ATCATCAGCTTTTCCGATAA+GGG - chr8_4:1184950-1184969 Msa1306310:intron 35.0%
AAATACGTTACCAACAGTTC+TGG + chr8_4:1185094-1185113 None:intergenic 35.0%
AATACCACCAATATGTATGC+AGG + chr8_4:1185136-1185155 None:intergenic 35.0%
!!! ACTTCCCAGCCAATTTTTTT+TGG - chr8_4:1185223-1185242 Msa1306310:intron 35.0%
TGTGCCAAAAAAAATTGGCT+GGG + chr8_4:1185230-1185249 None:intergenic 35.0%
TTGTGCCAAAAAAAATTGGC+TGG + chr8_4:1185231-1185250 None:intergenic 35.0%
AAAGGAACCAAATCATCACT+GGG + chr8_4:1185270-1185289 None:intergenic 35.0%
!! TTGGCTTGTTTGCTTAATTG+TGG - chr8_4:1185329-1185348 Msa1306310:intron 35.0%
CACAGATTTAGCCAAGAAAT+GGG + chr8_4:1185414-1185433 None:intergenic 35.0%
ACACAGATTTAGCCAAGAAA+TGG + chr8_4:1185415-1185434 None:intergenic 35.0%
TGCAGCATTAACATCCTAAA+AGG + chr8_4:1185517-1185536 None:intergenic 35.0%
ATGCTGCACAAGTTTCTATT+CGG - chr8_4:1185529-1185548 Msa1306310:intron 35.0%
TCAAAGTCAAAGATGCATGA+CGG - chr8_4:1185597-1185616 Msa1306310:three_prime_UTR 35.0%
GAAAAATATGGCTATCGCTA+TGG - chr8_4:1185636-1185655 Msa1306310:three_prime_UTR 35.0%
AAAATATGGCTATCGCTATG+GGG - chr8_4:1185638-1185657 Msa1306310:three_prime_UTR 35.0%
!!! GTTTGCAATTCCCTTTTTTC+TGG - chr8_4:1185766-1185785 Msa1306310:intron 35.0%
AAGAGGATGATCAATTACTG+GGG + chr8_4:1185985-1186004 None:intergenic 35.0%
!!! CGGAAATGTTTTAGTTAGTG+TGG - chr8_4:1186009-1186028 Msa1306310:intron 35.0%
TTTAGTTAGTGTGGGAGATT+TGG - chr8_4:1186018-1186037 Msa1306310:intron 35.0%
AAGTAGCAGTGGTATTTGAA+TGG - chr8_4:1186066-1186085 Msa1306310:intron 35.0%
AATATGGTCTCAGGATCAAA+AGG + chr8_4:1186159-1186178 None:intergenic 35.0%
TAGAGTAACAGCTGTAAATC+CGG + chr8_4:1186330-1186349 None:intergenic 35.0%
TTAATATCATTCCTCTTCCC+GGG + chr8_4:1186452-1186471 None:intergenic 35.0%
GTTAATATCATTCCTCTTCC+CGG + chr8_4:1186453-1186472 None:intergenic 35.0%
! GTCAACGCATTCTTTTTAGA+AGG - chr8_4:1186517-1186536 Msa1306310:intron 35.0%
TGTCATAGGCTCAGAATATA+AGG + chr8_4:1186687-1186706 None:intergenic 35.0%
ATGAATTCCAACAGTGTCAT+AGG + chr8_4:1186701-1186720 None:intergenic 35.0%
ATCTAATGACAGGTTTCAAC+CGG + chr8_4:1186822-1186841 None:intergenic 35.0%
! TCTTGATAATTTCCATTGCC+TGG + chr8_4:1186876-1186895 None:intergenic 35.0%
GAAACAAAGAAGAAACTTGC+GGG - chr8_4:1186907-1186926 Msa1306310:intron 35.0%
! AAGGGATATTTTCCTCAAGA+TGG - chr8_4:1186931-1186950 Msa1306310:intron 35.0%
!! ATGTATCTCTCTGAAATTGC+AGG - chr8_4:1187102-1187121 Msa1306310:three_prime_UTR 35.0%
TCTCAGAAAATTGCTTAGGA+AGG - chr8_4:1187141-1187160 Msa1306310:three_prime_UTR 35.0%
ACTTGATGAGACTCAAAGTT+TGG + chr8_4:1187199-1187218 None:intergenic 35.0%
AAACTTTGAGTCTCATCAAG+TGG - chr8_4:1187198-1187217 Msa1306310:three_prime_UTR 35.0%
TCGATCAGTATCTTCAAATC+AGG - chr8_4:1187245-1187264 Msa1306310:three_prime_UTR 35.0%
CGATCAGTATCTTCAAATCA+GGG - chr8_4:1187246-1187265 Msa1306310:three_prime_UTR 35.0%
GATCAGTATCTTCAAATCAG+GGG - chr8_4:1187247-1187266 Msa1306310:three_prime_UTR 35.0%
CGTGATATTGAAACACACTA+CGG - chr8_4:1187286-1187305 Msa1306310:three_prime_UTR 35.0%
GTGATATTGAAACACACTAC+GGG - chr8_4:1187287-1187306 Msa1306310:three_prime_UTR 35.0%
TGATATTGAAACACACTACG+GGG - chr8_4:1187288-1187307 Msa1306310:three_prime_UTR 35.0%
AGGACGTTGTTTATCAGAAA+GGG - chr8_4:1187361-1187380 Msa1306310:three_prime_UTR 35.0%
GTTGTTTATCAGAAAGGGTT+CGG - chr8_4:1187366-1187385 Msa1306310:three_prime_UTR 35.0%
TTGTTTATCAGAAAGGGTTC+GGG - chr8_4:1187367-1187386 Msa1306310:three_prime_UTR 35.0%
TTCCTCAAATGTGATCCTTT+GGG + chr8_4:1187466-1187485 None:intergenic 35.0%
TTTCCTCAAATGTGATCCTT+TGG + chr8_4:1187467-1187486 None:intergenic 35.0%
CATCCACTATTTACAGAAGT+TGG - chr8_4:1187503-1187522 Msa1306310:three_prime_UTR 35.0%
AAACTTGTGCTTGACATACA+AGG - chr8_4:1187533-1187552 Msa1306310:three_prime_UTR 35.0%
!! GTGGATTAATTTTGACAGTG+TGG + chr8_4:1187728-1187747 None:intergenic 35.0%
GAGTGACAATAAAGAATCTG+CGG + chr8_4:1187904-1187923 None:intergenic 35.0%
TAGAGTAGCAGCAAATCAAA+TGG - chr8_4:1187953-1187972 Msa1306310:three_prime_UTR 35.0%
AGATGTCCAATAAGAATCAC+CGG + chr8_4:1188030-1188049 None:intergenic 35.0%
ATGGAAAACATATTTGCCCA+TGG - chr8_4:1188251-1188270 Msa1306310:three_prime_UTR 35.0%
TAATCCCACACTAAATCCAT+GGG + chr8_4:1188270-1188289 None:intergenic 35.0%
! AGGGTTATAAATAGGAGCAT+TGG - chr8_4:1188320-1188339 Msa1306310:three_prime_UTR 35.0%
!! GGGTTATAAATAGGAGCATT+GGG - chr8_4:1188321-1188340 Msa1306310:three_prime_UTR 35.0%
GTCAATCAAATCTCCAAGTT+TGG + chr8_4:1188465-1188484 None:intergenic 35.0%
! GATTGACTCAAAGAGTAAGT+CGG - chr8_4:1188478-1188497 Msa1306310:three_prime_UTR 35.0%
!!! GAGAGGAAAGTTTTATTCCA+AGG - chr8_4:1188553-1188572 Msa1306310:three_prime_UTR 35.0%
CACACTATTCAAGAACTTGA+TGG - chr8_4:1188766-1188785 Msa1306310:CDS 35.0%
AATAACAACATCACGGAGAA+TGG + chr8_4:1188792-1188811 None:intergenic 35.0%
TCCATCATCCAGTTTGAATA+TGG - chr8_4:1188848-1188867 Msa1306310:intron 35.0%
TTTATAAGCAGGGTTTGACA+TGG + chr8_4:1188945-1188964 None:intergenic 35.0%
ATTGAGAAAAGTAAGCCTCA+AGG - chr8_4:1189235-1189254 Msa1306310:intron 35.0%
CTCAACAATGAAATCTAGTG+CGG + chr8_4:1189264-1189283 None:intergenic 35.0%
TATGGCAGTTATTAGGGATA+GGG + chr8_4:1189494-1189513 None:intergenic 35.0%
GTTTCAGTATGGCAGTTATT+AGG + chr8_4:1189501-1189520 None:intergenic 35.0%
CAGTTATAGACCAATGAGAT+TGG - chr8_4:1189643-1189662 Msa1306310:intron 35.0%
! TTGCTAACATGGATTAACCA+TGG - chr8_4:1189727-1189746 Msa1306310:intron 35.0%
! TTGATTACATTTGTGTCGAC+AGG - chr8_4:1189877-1189896 Msa1306310:intron 35.0%
! AGGCTAAGCTTTTAAATGGA+TGG - chr8_4:1189953-1189972 Msa1306310:intron 35.0%
! GGCTAAGCTTTTAAATGGAT+GGG - chr8_4:1189954-1189973 Msa1306310:intron 35.0%
! GCTAAGCTTTTAAATGGATG+GGG - chr8_4:1189955-1189974 Msa1306310:intron 35.0%
! CTAAGCTTTTAAATGGATGG+GGG - chr8_4:1189956-1189975 Msa1306310:intron 35.0%
CTAAATAGCACTTTGCTCAA+AGG + chr8_4:1190013-1190032 None:intergenic 35.0%
!! CTTTGAGCAAAGTGCTATTT+AGG - chr8_4:1190011-1190030 Msa1306310:intron 35.0%
TATGTACTCCGTATTTCGTT+GGG - chr8_4:1190196-1190215 Msa1306310:intron 35.0%
TAAGACGAATGTGACAAACA+AGG + chr8_4:1190377-1190396 None:intergenic 35.0%
TTGTCACATTCGTCTTAAAG+AGG - chr8_4:1190380-1190399 Msa1306310:CDS 35.0%
! ACATGTTTAGGATTTGATGC+AGG - chr8_4:1190420-1190439 Msa1306310:CDS 35.0%
GAGTGTTATAATGTTAGGTC+TGG - chr8_4:1190605-1190624 Msa1306310:intron 35.0%
! TTTGAGATAACTTGCCTGTT+TGG - chr8_4:1190694-1190713 Msa1306310:intron 35.0%
! TTGAGATAACTTGCCTGTTT+GGG - chr8_4:1190695-1190714 Msa1306310:intron 35.0%
GAGTGTTATAATGTTAGGTC+TGG - chr8_4:1190605-1190624 Msa1306310:intron 35.0%
! TTTGAGATAACTTGCCTGTT+TGG - chr8_4:1190694-1190713 Msa1306310:intron 35.0%
! TTGAGATAACTTGCCTGTTT+GGG - chr8_4:1190695-1190714 Msa1306310:intron 35.0%
GAAATTGATAAGGAGATCGA+TGG - chr8_4:1191046-1191065 Msa1306310:intron 35.0%
GGAGATCGATGGATATAAAA+AGG - chr8_4:1191057-1191076 Msa1306310:intron 35.0%
AGGGTCTTTATTGTGAATGT+CGG - chr8_4:1191077-1191096 Msa1306310:intron 35.0%
AGAATGTTGTGGAGGATAAT+TGG - chr8_4:1191139-1191158 Msa1306310:intron 35.0%
TGTTAGAAGTCAAACAACAC+AGG - chr8_4:1191215-1191234 Msa1306310:intron 35.0%
CAGAGTAATATCTTTACCAG+TGG + chr8_4:1191326-1191345 None:intergenic 35.0%
AAACCGTCAAAGTCACTATT+AGG + chr8_4:1191381-1191400 None:intergenic 35.0%
!! AGTGACTTTGACGGTTTTAT+AGG - chr8_4:1191384-1191403 Msa1306310:intron 35.0%
TGACAATAAGTTGTTCAGAC+AGG - chr8_4:1191460-1191479 Msa1306310:intron 35.0%
AAGTTTCTTCTTCCGACTAA+AGG + chr8_4:1191817-1191836 None:intergenic 35.0%
GACTACAATTTATGCCTGAT+TGG + chr8_4:1192022-1192041 None:intergenic 35.0%
ATCAGGCATAAATTGTAGTC+TGG - chr8_4:1192022-1192041 Msa1306310:intron 35.0%
TCAGGCATAAATTGTAGTCT+GGG - chr8_4:1192023-1192042 Msa1306310:intron 35.0%
GAAAAAGATGTGCGACAAAA+AGG + chr8_4:1192107-1192126 None:intergenic 35.0%
! TGTCGCACATCTTTTTCTTA+TGG - chr8_4:1192110-1192129 Msa1306310:intron 35.0%
!!! TCTAGTCTTGCATTTTTCAG+AGG - chr8_4:1192225-1192244 Msa1306310:intron 35.0%
!!! CTAGTCTTGCATTTTTCAGA+GGG - chr8_4:1192226-1192245 Msa1306310:intron 35.0%
AATCAAGGACTGGAACAATA+AGG + chr8_4:1192381-1192400 None:intergenic 35.0%
AAGGTACAGCATGATAATCA+AGG + chr8_4:1192396-1192415 None:intergenic 35.0%
! GTTTTTACATGGAATGGAGA+AGG + chr8_4:1192415-1192434 None:intergenic 35.0%
! GAGACACCATAGTTTTTACA+TGG + chr8_4:1192426-1192445 None:intergenic 35.0%
TGCACAATAGAATCTTCTCT+TGG - chr8_4:1192514-1192533 Msa1306310:intron 35.0%
TTCCAATGAACAAAGCAACA+TGG - chr8_4:1192584-1192603 Msa1306310:intron 35.0%
!! AACCATGTTGCTTTGTTCAT+TGG + chr8_4:1192589-1192608 None:intergenic 35.0%
! TTTTAACCAACCCCAAAAGT+GGG + chr8_4:1192618-1192637 None:intergenic 35.0%
CTGTTAGAAACAATCATCCA+AGG - chr8_4:1192953-1192972 Msa1306310:intron 35.0%
!! AAGGACATTTTAGGTAATGC+TGG - chr8_4:1193061-1193080 Msa1306310:CDS 35.0%
GGTAGAAACTGTTAATGGAA+AGG - chr8_4:1193112-1193131 Msa1306310:intron 35.0%
! ATTGATAAAGTGGAGCATCA+CGG + chr8_4:1193412-1193431 None:intergenic 35.0%
! CTTGGATTGCATTGATAAAG+TGG + chr8_4:1193422-1193441 None:intergenic 35.0%
AAGACATAGCAAGAAAATGC+AGG - chr8_4:1193636-1193655 Msa1306310:intron 35.0%
AGACATAGCAAGAAAATGCA+GGG - chr8_4:1193637-1193656 Msa1306310:intron 35.0%
GTTAAGAAATGTTAGAGTCG+TGG + chr8_4:1193826-1193845 None:intergenic 35.0%
TCACCATTAGAAGATTTGGA+CGG + chr8_4:1194100-1194119 None:intergenic 35.0%
TTCTAATGGTGAATTAGCAC+TGG - chr8_4:1194108-1194127 Msa1306310:intron 35.0%
CAATCAAATGAAGAACAGGA+AGG + chr8_4:1194201-1194220 None:intergenic 35.0%
CGCACGTTTAGTAAACATAA+AGG - chr8_4:1194376-1194395 Msa1306310:intron 35.0%
TGATTCCTACTCACAGTAAA+GGG + chr8_4:1194522-1194541 None:intergenic 35.0%
AACTAGGAAGCCAAGATTTA+TGG - chr8_4:1194692-1194711 Msa1306310:intron 35.0%
CTGCATATTGCCATAAATCT+TGG + chr8_4:1194705-1194724 None:intergenic 35.0%
TCATGCTTAGATCGTTATGT+AGG - chr8_4:1194759-1194778 Msa1306310:intron 35.0%
! ATACGTATATTCTGAGAGAC+TGG - chr8_4:1194861-1194880 Msa1306310:intron 35.0%
! TCTTTTCTTCACCGTTCTTT+TGG - chr8_4:1194914-1194933 Msa1306310:intron 35.0%
! AAAGCACCAAAACAGACAAA+AGG + chr8_4:1194950-1194969 None:intergenic 35.0%
TTAGTTGTAGCCTCAACATT+AGG - chr8_4:1195073-1195092 Msa1306310:intron 35.0%
TAGTTGTAGCCTCAACATTA+GGG - chr8_4:1195074-1195093 Msa1306310:intron 35.0%
AACATAAACCCCTAATGTTG+AGG + chr8_4:1195086-1195105 None:intergenic 35.0%
TTAGCAAGTAGTATGACTTG+TGG - chr8_4:1195196-1195215 Msa1306310:five_prime_UTR 35.0%
!!! TTGGTTGGTTTTAATACAGG+TGG - chr8_4:1195226-1195245 Msa1306310:five_prime_UTR 35.0%
TACAGGTGGTTATAAAACAC+TGG - chr8_4:1195240-1195259 Msa1306310:five_prime_UTR 35.0%
TCGATTTACCGAGTAAGCTA+GGG + chr8_4:1180796-1180815 None:intergenic 40.0%
! ATCGATTTACCGAGTAAGCT+AGG + chr8_4:1180797-1180816 None:intergenic 40.0%
! TCTTCGTGTTTTCTTCAGCT+AGG - chr8_4:1180967-1180986 Msa1306310:intron 40.0%
GTTTGGATGAGTTGTGAGTT+TGG - chr8_4:1181463-1181482 Msa1306310:intron 40.0%
TGAGTTTGGCGAAATCTTAG+TGG - chr8_4:1181477-1181496 Msa1306310:intron 40.0%
AGCTTCTGCAAAATGATGGT+GGG + chr8_4:1181553-1181572 None:intergenic 40.0%
TAGCTTCTGCAAAATGATGG+TGG + chr8_4:1181554-1181573 None:intergenic 40.0%
CATAGGCTTTGCCAAAATTG+CGG - chr8_4:1181622-1181641 Msa1306310:intron 40.0%
TGCATGCATGTTTCGTATCA+CGG + chr8_4:1181731-1181750 None:intergenic 40.0%
CTCCTTAAATGGCTGGAAAA+AGG + chr8_4:1181852-1181871 None:intergenic 40.0%
TTTCCAGCCATTTAAGGAGT+TGG - chr8_4:1181853-1181872 Msa1306310:three_prime_UTR 40.0%
TTCCAGCCATTTAAGGAGTT+GGG - chr8_4:1181854-1181873 Msa1306310:three_prime_UTR 40.0%
TTGTTCACCCATGTGTTCTT+GGG - chr8_4:1182175-1182194 Msa1306310:intron 40.0%
CCATAATCCCAAGAACACAT+GGG + chr8_4:1182185-1182204 None:intergenic 40.0%
GGGATTATGGCTATTTGTCA+AGG - chr8_4:1182195-1182214 Msa1306310:intron 40.0%
GTTGAGCAATATGCGATATC+TGG - chr8_4:1182244-1182263 Msa1306310:intron 40.0%
AAGGCTTATCTCACAAAGTG+GGG + chr8_4:1182486-1182505 None:intergenic 40.0%
CAAGGCTTATCTCACAAAGT+GGG + chr8_4:1182487-1182506 None:intergenic 40.0%
! TAATGCCACTACATCCCTTT+TGG - chr8_4:1182714-1182733 Msa1306310:intron 40.0%
AACAACCTTCCCTTCCAAAA+GGG + chr8_4:1182731-1182750 None:intergenic 40.0%
!! TTTTGGAAGGGAAGGTTGTT+GGG - chr8_4:1182731-1182750 Msa1306310:intron 40.0%
! TTGACTCGCATGGCTAATTT+GGG + chr8_4:1182931-1182950 None:intergenic 40.0%
AACTGGCTAATCCTTTCCTT+GGG - chr8_4:1182949-1182968 Msa1306310:intron 40.0%
TTTGGACGATGTGAATCTTG+TGG - chr8_4:1182984-1183003 Msa1306310:intron 40.0%
TTCAACTCAGTAACATGGCT+AGG + chr8_4:1183167-1183186 None:intergenic 40.0%
GTTGAAGAAAATACTGAGCC+TGG - chr8_4:1183181-1183200 Msa1306310:intron 40.0%
CTTGCGATTGAAGAAAACCA+AGG - chr8_4:1183217-1183236 Msa1306310:intron 40.0%
TTCTGCAAACCACAACTAAG+TGG - chr8_4:1183550-1183569 Msa1306310:intron 40.0%
! TGTTCCTTTGTTGTCAAGAG+AGG - chr8_4:1183680-1183699 Msa1306310:intron 40.0%
ACATCCTCTCTTGACAACAA+AGG + chr8_4:1183687-1183706 None:intergenic 40.0%
TAATTTCACACTGCGTTGTG+CGG - chr8_4:1183800-1183819 Msa1306310:intron 40.0%
!! GCTTTTACAGGGACTTTTTC+AGG - chr8_4:1183890-1183909 Msa1306310:intron 40.0%
ATAGGTTCACAAAACAGGGA+AGG + chr8_4:1183968-1183987 None:intergenic 40.0%
GGAGATAGGTTCACAAAACA+GGG + chr8_4:1183972-1183991 None:intergenic 40.0%
AGGAGATAGGTTCACAAAAC+AGG + chr8_4:1183973-1183992 None:intergenic 40.0%
CACAGAAAAACGAAGGAGAT+AGG + chr8_4:1183986-1184005 None:intergenic 40.0%
TTAAATGCGACCTTTCCTAG+TGG + chr8_4:1184046-1184065 None:intergenic 40.0%
TTGACCAAACAGGGTAAACA+AGG - chr8_4:1184095-1184114 Msa1306310:intron 40.0%
! CAAACCTTGTTTACCCTGTT+TGG + chr8_4:1184102-1184121 None:intergenic 40.0%
CAAACAGGGTAAACAAGGTT+TGG - chr8_4:1184100-1184119 Msa1306310:intron 40.0%
CTAATGAAGTCCATGAAAGC+AGG + chr8_4:1184153-1184172 None:intergenic 40.0%
GCCAGTAAGATCAAACACAA+TGG + chr8_4:1184209-1184228 None:intergenic 40.0%
! ATCTTACTGGCTGTAAGAGA+AGG - chr8_4:1184218-1184237 Msa1306310:three_prime_UTR 40.0%
!! TGTTGTTAGTTTGTGCCAAC+TGG - chr8_4:1184295-1184314 Msa1306310:intron 40.0%
TAAATAGATTGCTGTGGCAG+AGG - chr8_4:1184412-1184431 Msa1306310:intron 40.0%
!! ATACTGGCTCACAATCTTTC+AGG - chr8_4:1184491-1184510 Msa1306310:intron 40.0%
TTCATACTAACCTCACAGCA+AGG + chr8_4:1184558-1184577 None:intergenic 40.0%
ATGTCATGTGTTGAGTCTGA+AGG - chr8_4:1184642-1184661 Msa1306310:intron 40.0%
GAAACGGATAGAAATAGTGC+TGG + chr8_4:1184775-1184794 None:intergenic 40.0%
TAGTTGATCAGGGAACCATT+TGG - chr8_4:1184904-1184923 Msa1306310:intron 40.0%
TGGTTGCAATTGTGACCAAA+TGG + chr8_4:1184922-1184941 None:intergenic 40.0%
CAAACAATCACCAGAACTGT+TGG - chr8_4:1185081-1185100 Msa1306310:intron 40.0%
ATAGGAGCCTGCATACATAT+TGG - chr8_4:1185126-1185145 Msa1306310:intron 40.0%
AATCATCACTGGGATGCAAA+TGG + chr8_4:1185260-1185279 None:intergenic 40.0%
TTTGCATCCCAGTGATGATT+TGG - chr8_4:1185260-1185279 Msa1306310:intron 40.0%
CAAAGGAACCAAATCATCAC+TGG + chr8_4:1185271-1185290 None:intergenic 40.0%
CCAAGTTCCGTTCTATAACA+AGG + chr8_4:1185452-1185471 None:intergenic 40.0%
! CCTTGTTATAGAACGGAACT+TGG - chr8_4:1185449-1185468 Msa1306310:intron 40.0%
TGCTGCACAAGTTTCTATTC+GGG - chr8_4:1185530-1185549 Msa1306310:intron 40.0%
!!! CAAAGATGCATGACGGATTT+TGG - chr8_4:1185604-1185623 Msa1306310:three_prime_UTR 40.0%
AAATATGGCTATCGCTATGG+GGG - chr8_4:1185639-1185658 Msa1306310:intron 40.0%
TAATAGGAGGAAAGTAGCAG+TGG - chr8_4:1186055-1186074 Msa1306310:intron 40.0%
AGCAGTGGTATTTGAATGGT+TGG - chr8_4:1186070-1186089 Msa1306310:intron 40.0%
GCAGTGGTATTTGAATGGTT+GGG - chr8_4:1186071-1186090 Msa1306310:intron 40.0%
TGTGAACTCTCTGAATCTCA+AGG - chr8_4:1186294-1186313 Msa1306310:intron 40.0%
ATCTCAAGGATGAATTCCTC+CGG - chr8_4:1186308-1186327 Msa1306310:intron 40.0%
TTCTTATATTTCCCGGGAAG+AGG - chr8_4:1186438-1186457 Msa1306310:intron 40.0%
ATAAAGCAGAGTGAACCGAA+AGG + chr8_4:1186644-1186663 None:intergenic 40.0%
TTCGGTTCACTCTGCTTTAT+AGG - chr8_4:1186644-1186663 Msa1306310:intron 40.0%
TCGGTTCACTCTGCTTTATA+GGG - chr8_4:1186645-1186664 Msa1306310:intron 40.0%
GACAGTCAACAGATTCACTT+TGG + chr8_4:1186741-1186760 None:intergenic 40.0%
! TGAATCTGTTGACTGTCACA+TGG - chr8_4:1186744-1186763 Msa1306310:three_prime_UTR 40.0%
! GAATCTGTTGACTGTCACAT+GGG - chr8_4:1186745-1186764 Msa1306310:three_prime_UTR 40.0%
! AATCTGTTGACTGTCACATG+GGG - chr8_4:1186746-1186765 Msa1306310:three_prime_UTR 40.0%
AAAGAAGAAACTTGCGGGAA+AGG - chr8_4:1186912-1186931 Msa1306310:intron 40.0%
AAGAAGAAACTTGCGGGAAA+GGG - chr8_4:1186913-1186932 Msa1306310:intron 40.0%
! TGGTGTCAGTATCATGTCTT+CGG - chr8_4:1187014-1187033 Msa1306310:three_prime_UTR 40.0%
! TTTCTGAGAATTGTCAAGGC+CGG + chr8_4:1187130-1187149 None:intergenic 40.0%
GTCATCAGAAGTTCAAGATC+TGG - chr8_4:1187169-1187188 Msa1306310:three_prime_UTR 40.0%
TTGAAGATACTGATCGACCA+CGG + chr8_4:1187242-1187261 None:intergenic 40.0%
TCAAATCAGGGGAACTTCTA+AGG - chr8_4:1187258-1187277 Msa1306310:three_prime_UTR 40.0%
GTGTGTTTCAATATCACGTG+CGG + chr8_4:1187284-1187303 None:intergenic 40.0%
ATGATTCCTCAACAAAAGCG+TGG - chr8_4:1187326-1187345 Msa1306310:three_prime_UTR 40.0%
AAGCGTGGTTGGAAAAAATG+AGG - chr8_4:1187341-1187360 Msa1306310:three_prime_UTR 40.0%
GAGGACGTTGTTTATCAGAA+AGG - chr8_4:1187360-1187379 Msa1306310:three_prime_UTR 40.0%
CCACCAACTTCTGTAAATAG+TGG + chr8_4:1187509-1187528 None:intergenic 40.0%
CCACTATTTACAGAAGTTGG+TGG - chr8_4:1187506-1187525 Msa1306310:three_prime_UTR 40.0%
TTGTGCTTGACATACAAGGA+AGG - chr8_4:1187537-1187556 Msa1306310:three_prime_UTR 40.0%
TATGTCAACCTACTCACTGA+GGG - chr8_4:1187560-1187579 Msa1306310:three_prime_UTR 40.0%
! TTTTGACAGTGTGGTCATCA+TGG + chr8_4:1187719-1187738 None:intergenic 40.0%
CACTAATATGTGGACCACTA+GGG - chr8_4:1187745-1187764 Msa1306310:three_prime_UTR 40.0%
ACTAATATGTGGACCACTAG+GGG - chr8_4:1187746-1187765 Msa1306310:three_prime_UTR 40.0%
GTGACTGAGGGTAAAACAAA+TGG + chr8_4:1187794-1187813 None:intergenic 40.0%
AAGAATCTGCGGATAACTGA+AGG + chr8_4:1187893-1187912 None:intergenic 40.0%
!!! GCTCGTCAAGAGTTGTTTTT+TGG - chr8_4:1187929-1187948 Msa1306310:three_prime_UTR 40.0%
ACGATACTTGATTAGGCAGA+GGG - chr8_4:1188100-1188119 Msa1306310:three_prime_UTR 40.0%
!!! TTTTTTTAGCAAGGGTCCTC+AGG - chr8_4:1188190-1188209 Msa1306310:three_prime_UTR 40.0%
AAAAAATTGAGTGCCTCCTG+AGG + chr8_4:1188209-1188228 None:intergenic 40.0%
TGTGATACAACCCTTTCTGA+TGG - chr8_4:1188232-1188251 Msa1306310:three_prime_UTR 40.0%
ATTTGCCCATGGATTTAGTG+TGG - chr8_4:1188262-1188281 Msa1306310:three_prime_UTR 40.0%
TTTGCCCATGGATTTAGTGT+GGG - chr8_4:1188263-1188282 Msa1306310:three_prime_UTR 40.0%
GTAATCCCACACTAAATCCA+TGG + chr8_4:1188271-1188290 None:intergenic 40.0%
AATATCCAGGGCAGTGAAAA+GGG - chr8_4:1188301-1188320 Msa1306310:three_prime_UTR 40.0%
!! GCTTTGAAGTCAACCAAACT+TGG - chr8_4:1188449-1188468 Msa1306310:three_prime_UTR 40.0%
TTCCTCTCTCAAAGAGTTGT+TGG + chr8_4:1188541-1188560 None:intergenic 40.0%
!! TTATTCCAAGGGATTGGTTG+AGG - chr8_4:1188565-1188584 Msa1306310:exon 40.0%
CTCAAAGGATGCTTCTTTCA+TGG - chr8_4:1188659-1188678 Msa1306310:CDS 40.0%
GAATGCACCAACTCTTCATA+TGG + chr8_4:1188692-1188711 None:intergenic 40.0%
ATAATTGACCGCTCTTCTAG+AGG - chr8_4:1188728-1188747 Msa1306310:CDS 40.0%
! CAGATAATCCTCTAGAAGAG+CGG + chr8_4:1188739-1188758 None:intergenic 40.0%
TCTAGAGGATTATCTGAACC+AGG - chr8_4:1188743-1188762 Msa1306310:CDS 40.0%
AAGTTCTTGAATAGTGTGCC+TGG + chr8_4:1188764-1188783 None:intergenic 40.0%
! TTTGCTATGATGGAACTGTG+AGG - chr8_4:1188810-1188829 Msa1306310:CDS 40.0%
GCCATATTCAAACTGGATGA+TGG + chr8_4:1188852-1188871 None:intergenic 40.0%
CAAGGACTGCTTTATAAGCA+GGG + chr8_4:1188955-1188974 None:intergenic 40.0%
TCAAGGACTGCTTTATAAGC+AGG + chr8_4:1188956-1188975 None:intergenic 40.0%
TATTACCTTCATAAACCCCC+AGG + chr8_4:1189002-1189021 None:intergenic 40.0%
TCAGGAAATACTCCTTTGCA+AGG - chr8_4:1189103-1189122 Msa1306310:intron 40.0%
TCGCGAAAATGCTGCATATT+TGG - chr8_4:1189202-1189221 Msa1306310:intron 40.0%
!! AGTGTTACTGGTTCTAACAC+TGG + chr8_4:1189385-1189404 None:intergenic 40.0%
GTATGGCAGTTATTAGGGAT+AGG + chr8_4:1189495-1189514 None:intergenic 40.0%
GCCATACTGAAACAAATAGC+CGG - chr8_4:1189508-1189527 Msa1306310:intron 40.0%
TCCGGCTATTTGTTTCAGTA+TGG + chr8_4:1189512-1189531 None:intergenic 40.0%
GAAATGGATGTTTGGGTATC+CGG + chr8_4:1189530-1189549 None:intergenic 40.0%
GAGTAGGGAAATGGATGTTT+GGG + chr8_4:1189537-1189556 None:intergenic 40.0%
TGAGTAGGGAAATGGATGTT+TGG + chr8_4:1189538-1189557 None:intergenic 40.0%
!! TTAGAGGCTTGTTGCTAACA+TGG - chr8_4:1189716-1189735 Msa1306310:intron 40.0%
!!! AACATTCGATTTTGGGGTTG+AGG - chr8_4:1189819-1189838 Msa1306310:intron 40.0%
!!! AGCCTTTTAAAGCTAGTCCT+TGG + chr8_4:1189938-1189957 None:intergenic 40.0%
CTATGTACTCCGTATTTCGT+TGG - chr8_4:1190195-1190214 Msa1306310:intron 40.0%
ATGTACTCCGTATTTCGTTG+GGG - chr8_4:1190197-1190216 Msa1306310:intron 40.0%
! GTTTTACCCCCAACGAAATA+CGG + chr8_4:1190207-1190226 None:intergenic 40.0%
! AAAGATGGTACTGAAGATGC+AGG - chr8_4:1190351-1190370 Msa1306310:CDS 40.0%
ATGTTCCTATATCATGCAGC+TGG - chr8_4:1190444-1190463 Msa1306310:CDS 40.0%
! TATCAGATATGCAGTGGGTT+TGG - chr8_4:1190535-1190554 Msa1306310:intron 40.0%
GGCCACATTTGATATCGTAT+TGG - chr8_4:1190626-1190645 Msa1306310:intron 40.0%
AGCAAAACAGAGGTTAGAGT+AGG + chr8_4:1190670-1190689 None:intergenic 40.0%
! TACTCTAACCTCTGTTTTGC+TGG - chr8_4:1190669-1190688 Msa1306310:intron 40.0%
CTCAAAATCCAGCAAAACAG+AGG + chr8_4:1190680-1190699 None:intergenic 40.0%
CACGGTTAATAAACCCAAAC+AGG + chr8_4:1190711-1190730 None:intergenic 40.0%
GGCCACATTTGATATCGTAT+TGG - chr8_4:1190626-1190645 Msa1306310:intron 40.0%
AGCAAAACAGAGGTTAGAGT+AGG + chr8_4:1190670-1190689 None:intergenic 40.0%
! TACTCTAACCTCTGTTTTGC+TGG - chr8_4:1190669-1190688 Msa1306310:intron 40.0%
CTCAAAATCCAGCAAAACAG+AGG + chr8_4:1190680-1190699 None:intergenic 40.0%
CACGGTTAATAAACCCAAAC+AGG + chr8_4:1190711-1190730 None:intergenic 40.0%
GGGTCTTTATTGTGAATGTC+GGG - chr8_4:1191078-1191097 Msa1306310:intron 40.0%
GAGATATGAGAATGTTGTGG+AGG - chr8_4:1191131-1191150 Msa1306310:intron 40.0%
GAGCCTAATAGTGACTTTGA+CGG - chr8_4:1191375-1191394 Msa1306310:intron 40.0%
CATACCAGTAACAGCATATG+TGG + chr8_4:1191486-1191505 None:intergenic 40.0%
! TTTTGAGCAGGTGAAGTTAG+AGG - chr8_4:1191737-1191756 Msa1306310:intron 40.0%
CAGGCATAAATTGTAGTCTG+GGG - chr8_4:1192024-1192043 Msa1306310:intron 40.0%
ACAGCATGATAATCAAGGAC+TGG + chr8_4:1192391-1192410 None:intergenic 40.0%
GTAGGAAAGAAAGCAAGGAA+TGG + chr8_4:1192550-1192569 None:intergenic 40.0%
TTTAACCAACCCCAAAAGTG+GGG + chr8_4:1192617-1192636 None:intergenic 40.0%
! CTTTTAACCAACCCCAAAAG+TGG + chr8_4:1192619-1192638 None:intergenic 40.0%
TATTGCCTCCCAAAAACAAG+AGG - chr8_4:1192656-1192675 Msa1306310:intron 40.0%
!!! GTTTTCCTCTTGTTTTTGGG+AGG + chr8_4:1192664-1192683 None:intergenic 40.0%
AGCAAAACTCACTGCAAAGA+AGG + chr8_4:1192847-1192866 None:intergenic 40.0%
TGGTCTAAATCAACACCATC+CGG + chr8_4:1192896-1192915 None:intergenic 40.0%
TCGATACATGGGGTTTAGAT+AGG - chr8_4:1193028-1193047 Msa1306310:CDS 40.0%
CGATACATGGGGTTTAGATA+GGG - chr8_4:1193029-1193048 Msa1306310:CDS 40.0%
AACTGCACTTGTATTGTGCA+TGG - chr8_4:1193149-1193168 Msa1306310:intron 40.0%
! TATGAGTGTCAAAGGAGTGT+CGG + chr8_4:1193205-1193224 None:intergenic 40.0%
ATGTGTCGTATGAGTGTCAA+AGG + chr8_4:1193213-1193232 None:intergenic 40.0%
! TTTTTGTCACAGCATGAAGC+TGG - chr8_4:1193547-1193566 Msa1306310:intron 40.0%
ATTGCAATATCCCTCGTGTT+AGG - chr8_4:1193689-1193708 Msa1306310:intron 40.0%
TTGCAATATCCCTCGTGTTA+GGG - chr8_4:1193690-1193709 Msa1306310:intron 40.0%
TATTTGCGGAACTGATACGA+GGG + chr8_4:1194036-1194055 None:intergenic 40.0%
ATATTTGCGGAACTGATACG+AGG + chr8_4:1194037-1194056 None:intergenic 40.0%
AACCCGTCCAAATCTTCTAA+TGG - chr8_4:1194094-1194113 Msa1306310:intron 40.0%
CACCATTAGAAGATTTGGAC+GGG + chr8_4:1194099-1194118 None:intergenic 40.0%
TTAAACAAAGTGGCGATGCT+TGG - chr8_4:1194155-1194174 Msa1306310:intron 40.0%
CACATTTGATCAAGCGATTC+AGG - chr8_4:1194282-1194301 Msa1306310:intron 40.0%
CTGATTCCTACTCACAGTAA+AGG + chr8_4:1194523-1194542 None:intergenic 40.0%
CTTTACTGTGAGTAGGAATC+AGG - chr8_4:1194521-1194540 Msa1306310:intron 40.0%
!! GGCTTTTGGTGACATATAGT+TGG - chr8_4:1194542-1194561 Msa1306310:intron 40.0%
! ATTCCTCTGGTTTGTGCATT+TGG - chr8_4:1194732-1194751 Msa1306310:intron 40.0%
GCAGCATACAACCAAAAGAA+CGG + chr8_4:1194928-1194947 None:intergenic 40.0%
! ATGCTGCCTTTTGTCTGTTT+TGG - chr8_4:1194941-1194960 Msa1306310:intron 40.0%
! TTTTGTCAGCTACTGAGCTT+AGG - chr8_4:1195018-1195037 Msa1306310:five_prime_UTR 40.0%
AGTTGTAGCCTCAACATTAG+GGG - chr8_4:1195075-1195094 Msa1306310:intron 40.0%
TCAGTAAGAATGGTGGCAAA+AGG - chr8_4:1195148-1195167 Msa1306310:intron 40.0%
! TATGACTTGTGGCGGAAATT+TGG - chr8_4:1195207-1195226 Msa1306310:five_prime_UTR 40.0%
CGATCAAACCCTAGCTTACT+CGG - chr8_4:1180785-1180804 Msa1306310:three_prime_UTR 45.0%
AGCTAGGTGATCGAAACCTA+CGG - chr8_4:1180983-1181002 Msa1306310:intron 45.0%
CATGCACTATCCCGTTGTAT+TGG - chr8_4:1181745-1181764 Msa1306310:three_prime_UTR 45.0%
AACCCAACTCCTTAAATGGC+TGG + chr8_4:1181859-1181878 None:intergenic 45.0%
AAATGTGCCTTTGCGTTGTC+TGG - chr8_4:1182065-1182084 Msa1306310:intron 45.0%
GTTCAAACCAGACAACGCAA+AGG + chr8_4:1182075-1182094 None:intergenic 45.0%
GTTGTTCACCCATGTGTTCT+TGG - chr8_4:1182174-1182193 Msa1306310:intron 45.0%
CCCATGTGTTCTTGGGATTA+TGG - chr8_4:1182182-1182201 Msa1306310:intron 45.0%
GCCATAATCCCAAGAACACA+TGG + chr8_4:1182186-1182205 None:intergenic 45.0%
CTTATCTCACAAAGTGGGGT+CGG + chr8_4:1182482-1182501 None:intergenic 45.0%
CCAAGGCTTATCTCACAAAG+TGG + chr8_4:1182488-1182507 None:intergenic 45.0%
CCACTTTGTGAGATAAGCCT+TGG - chr8_4:1182485-1182504 Msa1306310:intron 45.0%
! CAGGTGCTACAGATTTACCA+AGG - chr8_4:1182675-1182694 Msa1306310:intron 45.0%
!! CCACTACATCCCTTTTGGAA+GGG - chr8_4:1182719-1182738 Msa1306310:intron 45.0%
!! TACATCCCTTTTGGAAGGGA+AGG - chr8_4:1182723-1182742 Msa1306310:intron 45.0%
CAACAACCTTCCCTTCCAAA+AGG + chr8_4:1182732-1182751 None:intergenic 45.0%
!! CTTTTGGAAGGGAAGGTTGT+TGG - chr8_4:1182730-1182749 Msa1306310:intron 45.0%
!! GTTGACTCGCATGGCTAATT+TGG + chr8_4:1182932-1182951 None:intergenic 45.0%
AATTAGCCATGCGAGTCAAC+TGG - chr8_4:1182932-1182951 Msa1306310:intron 45.0%
CAACTGGCTAATCCTTTCCT+TGG - chr8_4:1182948-1182967 Msa1306310:intron 45.0%
TCACATCGTCCAAACTCAAG+TGG + chr8_4:1182978-1182997 None:intergenic 45.0%
! ACCTTCGCATTTTCCTGCTT+CGG + chr8_4:1183015-1183034 None:intergenic 45.0%
TACTCCCACTCATACCCAAA+AGG + chr8_4:1183472-1183491 None:intergenic 45.0%
! TTGGGTATGAGTGGGAGTAT+TGG - chr8_4:1183473-1183492 Msa1306310:intron 45.0%
!! TGGGTATGAGTGGGAGTATT+GGG - chr8_4:1183474-1183493 Msa1306310:intron 45.0%
ACAAAACAGGGAAGGAGATG+GGG + chr8_4:1183960-1183979 None:intergenic 45.0%
CACAAAACAGGGAAGGAGAT+GGG + chr8_4:1183961-1183980 None:intergenic 45.0%
TCACAAAACAGGGAAGGAGA+TGG + chr8_4:1183962-1183981 None:intergenic 45.0%
GTTTGTGCCAACTGGTATTG+CGG - chr8_4:1184303-1184322 Msa1306310:intron 45.0%
ATCTGACAGCTGCAAATAGC+TGG + chr8_4:1184335-1184354 None:intergenic 45.0%
ATACTGTCTAGAGACACCAG+CGG - chr8_4:1184985-1185004 Msa1306310:intron 45.0%
!! ACCAGCGGTGTCATCATAAT+TGG - chr8_4:1185000-1185019 Msa1306310:intron 45.0%
!! CCAGCGGTGTCATCATAATT+GGG - chr8_4:1185001-1185020 Msa1306310:intron 45.0%
ATGTATGCAGGCTCCTATCT+TGG + chr8_4:1185124-1185143 None:intergenic 45.0%
TGCACAAGTTTCTATTCGGG+AGG - chr8_4:1185533-1185552 Msa1306310:intron 45.0%
!! GGCTTGTTACTTGGCACTAA+AGG - chr8_4:1185572-1185591 Msa1306310:intron 45.0%
GTATAGAACCACACCTCACA+AGG + chr8_4:1185687-1185706 None:intergenic 45.0%
! TGTGAGGTGTGGTTCTATAC+CGG - chr8_4:1185687-1185706 Msa1306310:intron 45.0%
GTGGTATTTGAATGGTTGGG+AGG - chr8_4:1186074-1186093 Msa1306310:intron 45.0%
TACAACCTATCCTGGAGCTT+TGG - chr8_4:1186097-1186116 Msa1306310:intron 45.0%
ACAACCTATCCTGGAGCTTT+GGG - chr8_4:1186098-1186117 Msa1306310:intron 45.0%
AGTAACAGCTGTAAATCCGG+AGG + chr8_4:1186327-1186346 None:intergenic 45.0%
ATTTCGCCATTCATGGGAAG+AGG + chr8_4:1186618-1186637 None:intergenic 45.0%
!! AGGAGCATTTCGCCATTCAT+GGG + chr8_4:1186624-1186643 None:intergenic 45.0%
!! AAGGAGCATTTCGCCATTCA+TGG + chr8_4:1186625-1186644 None:intergenic 45.0%
GAATGGCGAAATGCTCCTTT+CGG - chr8_4:1186626-1186645 Msa1306310:intron 45.0%
CGGTTCACTCTGCTTTATAG+GGG - chr8_4:1186646-1186665 Msa1306310:intron 45.0%
TTCTGAGCCTATGACACTGT+TGG - chr8_4:1186691-1186710 Msa1306310:intron 45.0%
GTCAAATGTCTACCAGGCAA+TGG - chr8_4:1186861-1186880 Msa1306310:intron 45.0%
TCTGTGCCAGTAGTTTCAGA+TGG - chr8_4:1186994-1187013 Msa1306310:three_prime_UTR 45.0%
! CTGACACCATCTGAAACTAC+TGG + chr8_4:1187003-1187022 None:intergenic 45.0%
TCAGTATCATGTCTTCGGTG+AGG - chr8_4:1187019-1187038 Msa1306310:three_prime_UTR 45.0%
!! CTCTCTGAAATTGCAGGATC+CGG - chr8_4:1187108-1187127 Msa1306310:three_prime_UTR 45.0%
! TTCCTCAACAAAAGCGTGGT+TGG - chr8_4:1187330-1187349 Msa1306310:three_prime_UTR 45.0%
! TTCCAACCACGCTTTTGTTG+AGG + chr8_4:1187335-1187354 None:intergenic 45.0%
ATCTCCAGTGATCACATTCC+GGG + chr8_4:1187400-1187419 None:intergenic 45.0%
CATCTCCAGTGATCACATTC+CGG + chr8_4:1187401-1187420 None:intergenic 45.0%
GGAATGTGATCACTGGAGAT+GGG - chr8_4:1187400-1187419 Msa1306310:three_prime_UTR 45.0%
TGAAGTTGGAATTCCGCTTG+AGG - chr8_4:1187437-1187456 Msa1306310:three_prime_UTR 45.0%
TGCCCAAAGGATCACATTTG+AGG - chr8_4:1187461-1187480 Msa1306310:three_prime_UTR 45.0%
GTATGTCAACCTACTCACTG+AGG - chr8_4:1187559-1187578 Msa1306310:three_prime_UTR 45.0%
GGGCACACTTATCTTAAACC+TGG - chr8_4:1187594-1187613 Msa1306310:three_prime_UTR 45.0%
GTATACCACAAGTGCTTGCA+AGG + chr8_4:1187694-1187713 None:intergenic 45.0%
CCTAGTGGTCCACATATTAG+TGG + chr8_4:1187747-1187766 None:intergenic 45.0%
CCACTAATATGTGGACCACT+AGG - chr8_4:1187744-1187763 Msa1306310:three_prime_UTR 45.0%
CAACTTCTCAGCTCTCATAG+TGG - chr8_4:1187858-1187877 Msa1306310:three_prime_UTR 45.0%
!! AGTAAAGCAGGCATTGGCAA+AGG + chr8_4:1187996-1188015 None:intergenic 45.0%
CCAATAAGAATCACCGGTAC+TGG + chr8_4:1188024-1188043 None:intergenic 45.0%
!! CCAGTACCGGTGATTCTTAT+TGG - chr8_4:1188021-1188040 Msa1306310:three_prime_UTR 45.0%
CCAGTACAATCGAACGAGAA+AGG + chr8_4:1188077-1188096 None:intergenic 45.0%
CCTTTCTCGTTCGATTGTAC+TGG - chr8_4:1188074-1188093 Msa1306310:three_prime_UTR 45.0%
TTCTCGTTCGATTGTACTGG+AGG - chr8_4:1188077-1188096 Msa1306310:three_prime_UTR 45.0%
CTGGAGGACGATACTTGATT+AGG - chr8_4:1188093-1188112 Msa1306310:three_prime_UTR 45.0%
GACGATACTTGATTAGGCAG+AGG - chr8_4:1188099-1188118 Msa1306310:three_prime_UTR 45.0%
GATTAGGCAGAGGGAAATCT+TGG - chr8_4:1188109-1188128 Msa1306310:three_prime_UTR 45.0%
CAATATCCAGGGCAGTGAAA+AGG - chr8_4:1188300-1188319 Msa1306310:three_prime_UTR 45.0%
! TATAACCCTTTTCACTGCCC+TGG + chr8_4:1188309-1188328 None:intergenic 45.0%
GAGGGGAATGTACAAAGAAC+TGG - chr8_4:1188370-1188389 Msa1306310:three_prime_UTR 45.0%
GGGAATGTACAAAGAACTGG+TGG - chr8_4:1188373-1188392 Msa1306310:three_prime_UTR 45.0%
AGAACTGGTGGCTCAACAAT+TGG - chr8_4:1188385-1188404 Msa1306310:three_prime_UTR 45.0%
TACATCCTCAACCAATCCCT+TGG + chr8_4:1188573-1188592 None:intergenic 45.0%
GATTATCCCTCTGCTGAGTT+TGG - chr8_4:1188632-1188651 Msa1306310:CDS 45.0%
AGCAAACCAAACTCAGCAGA+GGG + chr8_4:1188641-1188660 None:intergenic 45.0%
!! GCTGAGTTTGGTTTGCTCAA+AGG - chr8_4:1188644-1188663 Msa1306310:CDS 45.0%
TCCAAGCAGCAATTCTTCCT+GGG - chr8_4:1188982-1189001 Msa1306310:CDS 45.0%
TTCTTCCTGGGGGTTTATGA+AGG - chr8_4:1188994-1189013 Msa1306310:CDS 45.0%
TCCTTTGCAAGGTGAACTTC+AGG - chr8_4:1189114-1189133 Msa1306310:intron 45.0%
TCCTGAAGTTCACCTTGCAA+AGG + chr8_4:1189118-1189137 None:intergenic 45.0%
GCAGTTATTAGGGATAGGGA+AGG + chr8_4:1189490-1189509 None:intergenic 45.0%
CAATGCTGGTCCAATCTCAT+TGG + chr8_4:1189656-1189675 None:intergenic 45.0%
! ATGAACCATTTTCTGGGCCA+AGG - chr8_4:1189918-1189937 Msa1306310:intron 45.0%
!! GGCCAAGGACTAGCTTTAAA+AGG - chr8_4:1189933-1189952 Msa1306310:intron 45.0%
TGTACTCCGTATTTCGTTGG+GGG - chr8_4:1190198-1190217 Msa1306310:intron 45.0%
TTGTGCCAGCTGCATGATAT+AGG + chr8_4:1190452-1190471 None:intergenic 45.0%
TTGTTGACCTCCGTAAACCT+TGG - chr8_4:1191291-1191310 Msa1306310:intron 45.0%
TGTTGACCTCCGTAAACCTT+GGG - chr8_4:1191292-1191311 Msa1306310:intron 45.0%
! GTTTTCACCCCCAAGGTTTA+CGG + chr8_4:1191304-1191323 None:intergenic 45.0%
CACACGTAGGAAAGAAAGCA+AGG + chr8_4:1192555-1192574 None:intergenic 45.0%
! ATGGTTTTTCCCCCCACTTT+TGG - chr8_4:1192603-1192622 Msa1306310:intron 45.0%
!! TGGTTTTTCCCCCCACTTTT+GGG - chr8_4:1192604-1192623 Msa1306310:intron 45.0%
TTAACCAACCCCAAAAGTGG+GGG + chr8_4:1192616-1192635 None:intergenic 45.0%
CCAAAGGAACGTTACACAAG+GGG + chr8_4:1192873-1192892 None:intergenic 45.0%
GCCAAAGGAACGTTACACAA+GGG + chr8_4:1192874-1192893 None:intergenic 45.0%
TTGTGTAACGTTCCTTTGGC+CGG - chr8_4:1192874-1192893 Msa1306310:intron 45.0%
AGACCAAACGACTAAAGTCC+TGG - chr8_4:1192910-1192929 Msa1306310:intron 45.0%
ACATGGGGTTTAGATAGGGA+AGG - chr8_4:1193033-1193052 Msa1306310:CDS 45.0%
TATTGTGCATGGACACCTCT+AGG - chr8_4:1193160-1193179 Msa1306310:intron 45.0%
GACACTCATACGACACATGT+CGG - chr8_4:1193215-1193234 Msa1306310:CDS 45.0%
GTTATATAGCTGCCAGACAC+CGG + chr8_4:1193301-1193320 None:intergenic 45.0%
! GTTGACTCCCCTATTAGAGT+AGG - chr8_4:1193386-1193405 Msa1306310:intron 45.0%
ATCACGGCCTACTCTAATAG+GGG + chr8_4:1193396-1193415 None:intergenic 45.0%
CATCACGGCCTACTCTAATA+GGG + chr8_4:1193397-1193416 None:intergenic 45.0%
TGCAAGAACTCAATGCAAGG+TGG + chr8_4:1193511-1193530 None:intergenic 45.0%
GAGTGCAAGAACTCAATGCA+AGG + chr8_4:1193514-1193533 None:intergenic 45.0%
TTAATCCTGGCACGAACACA+TGG - chr8_4:1194065-1194084 Msa1306310:intron 45.0%
TAATCCTGGCACGAACACAT+GGG - chr8_4:1194066-1194085 Msa1306310:intron 45.0%
CAAATGAAGAACAGGAAGGC+AGG + chr8_4:1194197-1194216 None:intergenic 45.0%
ACTAAACGTGCGTGTTCACA+AGG + chr8_4:1194368-1194387 None:intergenic 45.0%
TCCTACTCACAGTAAAGGGA+GGG + chr8_4:1194518-1194537 None:intergenic 45.0%
TTCCTACTCACAGTAAAGGG+AGG + chr8_4:1194519-1194538 None:intergenic 45.0%
! GTGAGTAGGAATCAGGCTTT+TGG - chr8_4:1194528-1194547 Msa1306310:intron 45.0%
ATGCAGTGTTTGCATTCCTC+TGG - chr8_4:1194719-1194738 Msa1306310:intron 45.0%
TCTCCAAATGCACAAACCAG+AGG + chr8_4:1194738-1194757 None:intergenic 45.0%
AGACAAGGAGCAAAAAGCAG+AGG + chr8_4:1194837-1194856 None:intergenic 45.0%
CCATTCTTACTGATGCTGCA+AGG + chr8_4:1195141-1195160 None:intergenic 45.0%
CCTTGCAGCATCAGTAAGAA+TGG - chr8_4:1195138-1195157 Msa1306310:intron 45.0%
TGCAGCATCAGTAAGAATGG+TGG - chr8_4:1195141-1195160 Msa1306310:intron 45.0%
! GCAAGTAGTATGACTTGTGG+CGG - chr8_4:1195199-1195218 Msa1306310:five_prime_UTR 45.0%
! ACTTGTGGCGGAAATTTGGT+TGG - chr8_4:1195211-1195230 Msa1306310:five_prime_UTR 45.0%
!!! TTTTTTTTTTTTTTTCATTT+TGG - chr8_4:1181795-1181814 Msa1306310:three_prime_UTR 5.0%
GTGCATGTTTGGTATCTCGG+CGG - chr8_4:1181526-1181545 Msa1306310:intron 50.0%
! ACAGTGACACGCCGCAATTT+TGG + chr8_4:1181636-1181655 None:intergenic 50.0%
GCACTATCCCGTTGTATTGG+AGG - chr8_4:1181748-1181767 Msa1306310:three_prime_UTR 50.0%
ATCCCGTTGTATTGGAGGTG+AGG - chr8_4:1181753-1181772 Msa1306310:three_prime_UTR 50.0%
TCCCGTTGTATTGGAGGTGA+GGG - chr8_4:1181754-1181773 Msa1306310:three_prime_UTR 50.0%
ACCCTCACCTCCAATACAAC+GGG + chr8_4:1181758-1181777 None:intergenic 50.0%
CACCCTCACCTCCAATACAA+CGG + chr8_4:1181759-1181778 None:intergenic 50.0%
! GCCACTACATCCCTTTTGGA+AGG - chr8_4:1182718-1182737 Msa1306310:intron 50.0%
CCCTTCCAAAAGGGATGTAG+TGG + chr8_4:1182722-1182741 None:intergenic 50.0%
TGTTGGGATCCGCTTCAGTA+TGG - chr8_4:1182747-1182766 Msa1306310:intron 50.0%
!! GATTAGCCAGTTGACTCGCA+TGG + chr8_4:1182941-1182960 None:intergenic 50.0%
TCAAGTGGAAGCCCAAGGAA+AGG + chr8_4:1182963-1182982 None:intergenic 50.0%
CAAACTCAAGTGGAAGCCCA+AGG + chr8_4:1182968-1182987 None:intergenic 50.0%
CTTGGGCTTCCACTTGAGTT+TGG - chr8_4:1182966-1182985 Msa1306310:intron 50.0%
TCCGAAGCAGGAAAATGCGA+AGG - chr8_4:1183011-1183030 Msa1306310:intron 50.0%
ATAGAGGAGCGGTCTCATTC+AGG - chr8_4:1183774-1183793 Msa1306310:intron 50.0%
TAGAGGAGCGGTCTCATTCA+GGG - chr8_4:1183775-1183794 Msa1306310:intron 50.0%
GCAGTAACCGCAATACCAGT+TGG + chr8_4:1184313-1184332 None:intergenic 50.0%
CAGGTACCTTCTTCAAGCAG+TGG - chr8_4:1184510-1184529 Msa1306310:intron 50.0%
ACCTTCTTCAAGCAGTGGCT+TGG - chr8_4:1184515-1184534 Msa1306310:intron 50.0%
! CGGGGCACTTGTTAAGGAAA+CGG + chr8_4:1184791-1184810 None:intergenic 50.0%
TTCCTTAACAAGTGCCCCGA+TGG - chr8_4:1184792-1184811 Msa1306310:intron 50.0%
! TACCATCGGGGCACTTGTTA+AGG + chr8_4:1184797-1184816 None:intergenic 50.0%
GTGCCCCGATGGTATACTTT+AGG - chr8_4:1184803-1184822 Msa1306310:intron 50.0%
CCCAATTATGATGACACCGC+TGG + chr8_4:1185004-1185023 None:intergenic 50.0%
GGAGCCTGCATACATATTGG+TGG - chr8_4:1185129-1185148 Msa1306310:intron 50.0%
GGGAGGTCAAAACAGCTGAT+GGG - chr8_4:1185550-1185569 Msa1306310:intron 50.0%
GGAGGTCAAAACAGCTGATG+GGG - chr8_4:1185551-1185570 Msa1306310:intron 50.0%
!! AGCTGATGGGGCTTGTTACT+TGG - chr8_4:1185563-1185582 Msa1306310:intron 50.0%
TCGAGCTTTGCTTCCTTGTG+AGG - chr8_4:1185671-1185690 Msa1306310:intron 50.0%
CTTTGCTTCCTTGTGAGGTG+TGG - chr8_4:1185676-1185695 Msa1306310:intron 50.0%
! TTGGGAGGTACAACCTATCC+TGG - chr8_4:1186089-1186108 Msa1306310:intron 50.0%
TACAAGACTCCCAAAGCTCC+AGG + chr8_4:1186110-1186129 None:intergenic 50.0%
CATTCATGGGAAGAGGATGC+TGG + chr8_4:1186611-1186630 None:intergenic 50.0%
CAGCATCCTCTTCCCATGAA+TGG - chr8_4:1186609-1186628 Msa1306310:intron 50.0%
! GGCAATTTGGTGGTACAGGA+AGG + chr8_4:1186972-1186991 None:intergenic 50.0%
! GACAGGCAATTTGGTGGTAC+AGG + chr8_4:1186976-1186995 None:intergenic 50.0%
ACTGGCACAGACAGGCAATT+TGG + chr8_4:1186985-1187004 None:intergenic 50.0%
CTGAAACTACTGGCACAGAC+AGG + chr8_4:1186993-1187012 None:intergenic 50.0%
!! AAGGGTTCGGGTTTTCTTCC+CGG - chr8_4:1187379-1187398 Msa1306310:three_prime_UTR 50.0%
TCTTCCCGGAATGTGATCAC+TGG - chr8_4:1187393-1187412 Msa1306310:three_prime_UTR 50.0%
CGGAATGTGATCACTGGAGA+TGG - chr8_4:1187399-1187418 Msa1306310:three_prime_UTR 50.0%
ATCCTTTGGGCAACCTCAAG+CGG + chr8_4:1187453-1187472 None:intergenic 50.0%
TCAACCTACTCACTGAGGGA+GGG - chr8_4:1187564-1187583 Msa1306310:three_prime_UTR 50.0%
AACCTGGTCAGATAGTGCAC+CGG - chr8_4:1187610-1187629 Msa1306310:three_prime_UTR 50.0%
GATAGTGCACCGGAGGATTA+TGG - chr8_4:1187620-1187639 Msa1306310:three_prime_UTR 50.0%
TATCCCCGTCCATAATCCTC+CGG + chr8_4:1187632-1187651 None:intergenic 50.0%
!! AAGGAGTGCTTGTGGGTAGT+TGG + chr8_4:1187675-1187694 None:intergenic 50.0%
!! TGCTTGCAAGGAGTGCTTGT+GGG + chr8_4:1187682-1187701 None:intergenic 50.0%
AATATGTGGACCACTAGGGG+CGG - chr8_4:1187749-1187768 Msa1306310:three_prime_UTR 50.0%
CTTTAGCAGCGAGTGACTGA+GGG + chr8_4:1187806-1187825 None:intergenic 50.0%
! CGCTGCTAAAGCTGAGGTTT+TGG - chr8_4:1187815-1187834 Msa1306310:three_prime_UTR 50.0%
GCCAATGCCTGCTTTACTCA+AGG - chr8_4:1187998-1188017 Msa1306310:three_prime_UTR 50.0%
GCCTTGAGTAAAGCAGGCAT+TGG + chr8_4:1188002-1188021 None:intergenic 50.0%
!! GTACTGGCCTTGAGTAAAGC+AGG + chr8_4:1188008-1188027 None:intergenic 50.0%
GCTTTACTCAAGGCCAGTAC+CGG - chr8_4:1188008-1188027 Msa1306310:three_prime_UTR 50.0%
! TTTTAGCAAGGGTCCTCAGG+AGG - chr8_4:1188193-1188212 Msa1306310:three_prime_UTR 50.0%
ACCTTTGTTGCGTCAGCTGA+GGG - chr8_4:1188352-1188371 Msa1306310:three_prime_UTR 50.0%
GAGTAAGTCGGCTGTTGACA+AGG - chr8_4:1188490-1188509 Msa1306310:three_prime_UTR 50.0%
! GGCCAACAACTCTTTGAGAG+AGG - chr8_4:1188536-1188555 Msa1306310:three_prime_UTR 50.0%
GAGCAAACCAAACTCAGCAG+AGG + chr8_4:1188642-1188661 None:intergenic 50.0%
ACCAGCAGGGAATAAGTGCT+GGG + chr8_4:1188894-1188913 None:intergenic 50.0%
GTTGCAGCTAAGACACCTAC+AGG + chr8_4:1188920-1188939 None:intergenic 50.0%
!! TGCTGCTTGGACTAGCATCA+AGG + chr8_4:1188973-1188992 None:intergenic 50.0%
GTCCAAGCAGCAATTCTTCC+TGG - chr8_4:1188981-1189000 Msa1306310:CDS 50.0%
CCAAGCAGCAATTCTTCCTG+GGG - chr8_4:1188983-1189002 Msa1306310:CDS 50.0%
CAAGCAGCAATTCTTCCTGG+GGG - chr8_4:1188984-1189003 Msa1306310:CDS 50.0%
AATCTAGTGCGGCATCCTTG+AGG + chr8_4:1189253-1189272 None:intergenic 50.0%
!!! TCGATTTTGGGGTTGAGGTC+TGG - chr8_4:1189824-1189843 Msa1306310:intron 50.0%
!!! CGATTTTGGGGTTGAGGTCT+GGG - chr8_4:1189825-1189844 Msa1306310:intron 50.0%
CTAGTCCTTGGCCCAGAAAA+TGG + chr8_4:1189926-1189945 None:intergenic 50.0%
AATGGATGGGGGTCCATGAA+TGG - chr8_4:1189967-1189986 Msa1306310:intron 50.0%
ACAGGCTCTGTGACCTAAAC+TGG - chr8_4:1191233-1191252 Msa1306310:intron 50.0%
GTTGACCTCCGTAAACCTTG+GGG - chr8_4:1191293-1191312 Msa1306310:intron 50.0%
TTGACCTCCGTAAACCTTGG+GGG - chr8_4:1191294-1191313 Msa1306310:intron 50.0%
CAGGCCACATATGCTGTTAC+TGG - chr8_4:1191479-1191498 Msa1306310:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr8_4:1192470-1192489 Msa1306310:intron 50.0%
GGAACAAGAAGCTCACACGT+AGG + chr8_4:1192568-1192587 None:intergenic 50.0%
!! GGTTTTTCCCCCCACTTTTG+GGG - chr8_4:1192605-1192624 Msa1306310:intron 50.0%
TAACCAACCCCAAAAGTGGG+GGG + chr8_4:1192615-1192634 None:intergenic 50.0%
CCCCTTGTGTAACGTTCCTT+TGG - chr8_4:1192870-1192889 Msa1306310:intron 50.0%
GGCCAAAGGAACGTTACACA+AGG + chr8_4:1192875-1192894 None:intergenic 50.0%
AATCAACACCATCCGGCCAA+AGG + chr8_4:1192889-1192908 None:intergenic 50.0%
CAGCCAGGACTTTAGTCGTT+TGG + chr8_4:1192916-1192935 None:intergenic 50.0%
!! CCAAGGAGTGTCGAAGCAAA+TGG + chr8_4:1193277-1193296 None:intergenic 50.0%
CCATTTGCTTCGACACTCCT+TGG - chr8_4:1193274-1193293 Msa1306310:exon 50.0%
GCATCACGGCCTACTCTAAT+AGG + chr8_4:1193398-1193417 None:intergenic 50.0%
ACCCTCAATCGCTAGTACCT+CGG + chr8_4:1193720-1193739 None:intergenic 50.0%
AACAAAGTGGCGATGCTTGG+AGG - chr8_4:1194158-1194177 Msa1306310:intron 50.0%
TCCCTCCCTTTACTGTGAGT+AGG - chr8_4:1194514-1194533 Msa1306310:intron 50.0%
GTATTGGAGGTGAGGGTGAG+TGG - chr8_4:1181761-1181780 Msa1306310:three_prime_UTR 55.0%
ACAAAGTGGGGTCGGCTACA+TGG + chr8_4:1182474-1182493 None:intergenic 55.0%
GGCGTGTAGCCATACTGAAG+CGG + chr8_4:1182759-1182778 None:intergenic 55.0%
TCTTGTGGCACTTCCGAAGC+AGG - chr8_4:1182999-1183018 Msa1306310:intron 55.0%
GCAAGCAGCTTAAGCAGACC+AGG + chr8_4:1183202-1183221 None:intergenic 55.0%
CTGACTGCTACGAGCTGTCA+AGG + chr8_4:1183721-1183740 None:intergenic 55.0%
TGACAGCTCGTAGCAGTCAG+TGG - chr8_4:1183721-1183740 Msa1306310:intron 55.0%
GGTGTGGCGTCTCAGAATAG+AGG - chr8_4:1183758-1183777 Msa1306310:intron 55.0%
GGCGTCTCAGAATAGAGGAG+CGG - chr8_4:1183763-1183782 Msa1306310:intron 55.0%
! ACTGCGTTGTGCGGTTTTCG+TGG - chr8_4:1183809-1183828 Msa1306310:intron 55.0%
GTGGCGCTATTGAGTGCGAT+GGG - chr8_4:1183828-1183847 Msa1306310:intron 55.0%
GCCAAGCCACTGCTTGAAGA+AGG + chr8_4:1184519-1184538 None:intergenic 55.0%
CGGGAGGTCAAAACAGCTGA+TGG - chr8_4:1185549-1185568 Msa1306310:intron 55.0%
GACTCCCAAAGCTCCAGGAT+AGG + chr8_4:1186105-1186124 None:intergenic 55.0%
TGGGAAGAGGATGCTGGCAA+AGG + chr8_4:1186605-1186624 None:intergenic 55.0%
GGCACAGACAGGCAATTTGG+TGG + chr8_4:1186982-1187001 None:intergenic 55.0%
AGCCAACGACTTGCAATCCG+TGG - chr8_4:1187222-1187241 Msa1306310:three_prime_UTR 55.0%
! GACCACGGATTGCAAGTCGT+TGG + chr8_4:1187227-1187246 None:intergenic 55.0%
TTCCGCTTGAGGTTGCCCAA+AGG - chr8_4:1187448-1187467 Msa1306310:three_prime_UTR 55.0%
GTCAACCTACTCACTGAGGG+AGG - chr8_4:1187563-1187582 Msa1306310:three_prime_UTR 55.0%
TCACTGAGGGAGGGCTCAAA+GGG - chr8_4:1187573-1187592 Msa1306310:three_prime_UTR 55.0%
GTGCACCGGAGGATTATGGA+CGG - chr8_4:1187624-1187643 Msa1306310:three_prime_UTR 55.0%
TGCACCGGAGGATTATGGAC+GGG - chr8_4:1187625-1187644 Msa1306310:three_prime_UTR 55.0%
GAGTGCTTGTGGGTAGTTGG+CGG + chr8_4:1187672-1187691 None:intergenic 55.0%
!! GTGCTTGCAAGGAGTGCTTG+TGG + chr8_4:1187683-1187702 None:intergenic 55.0%
GCACTCCTTGCAAGCACTTG+TGG - chr8_4:1187686-1187705 Msa1306310:three_prime_UTR 55.0%
CCATCAAAATCCGCCCCTAG+TGG + chr8_4:1187762-1187781 None:intergenic 55.0%
!! CCACTAGGGGCGGATTTTGA+TGG - chr8_4:1187759-1187778 Msa1306310:three_prime_UTR 55.0%
GCTTTAGCAGCGAGTGACTG+AGG + chr8_4:1187807-1187826 None:intergenic 55.0%
GTCACTCGCTGCTAAAGCTG+AGG - chr8_4:1187809-1187828 Msa1306310:three_prime_UTR 55.0%
CACCTTTGTTGCGTCAGCTG+AGG - chr8_4:1188351-1188370 Msa1306310:three_prime_UTR 55.0%
CCTTTGTTGCGTCAGCTGAG+GGG - chr8_4:1188353-1188372 Msa1306310:three_prime_UTR 55.0%
CACCAGCAGGGAATAAGTGC+TGG + chr8_4:1188895-1188914 None:intergenic 55.0%
CCCCAGGAAGAATTGCTGCT+TGG + chr8_4:1188986-1189005 None:intergenic 55.0%
CAGCAGCGAAGACGCAAAGA+TGG - chr8_4:1190336-1190355 Msa1306310:CDS 55.0%
TTCACCCCCAAGGTTTACGG+AGG + chr8_4:1191301-1191320 None:intergenic 55.0%
ACCTTGGGGGTGAAAACCAC+TGG - chr8_4:1191307-1191326 Msa1306310:intron 55.0%
! ACCAGTGGTTTTCACCCCCA+AGG + chr8_4:1191311-1191330 None:intergenic 55.0%
!!! TTTCCCCCCACTTTTGGGGT+TGG - chr8_4:1192609-1192628 Msa1306310:intron 55.0%
GTAACGTTCCTTTGGCCGGA+TGG - chr8_4:1192878-1192897 Msa1306310:intron 55.0%
!! GCATGGACACCTCTAGGACT+AGG - chr8_4:1193166-1193185 Msa1306310:intron 55.0%
!! CTCTAGGACTAGGTGTGTCG+CGG - chr8_4:1193176-1193195 Msa1306310:intron 55.0%
TGCTTCGACACTCCTTGGAC+CGG - chr8_4:1193279-1193298 Msa1306310:exon 55.0%
CTCGGGTTACCCTAACACGA+GGG + chr8_4:1193702-1193721 None:intergenic 55.0%
! ACCCGAGGTACTAGCGATTG+AGG - chr8_4:1193715-1193734 Msa1306310:intron 55.0%
CCCTCAATCGCTAGTACCTC+GGG + chr8_4:1193719-1193738 None:intergenic 55.0%
! CCCGAGGTACTAGCGATTGA+GGG - chr8_4:1193716-1193735 Msa1306310:intron 55.0%
TGAGACGCCACACCGCATGT+GGG + chr8_4:1183752-1183771 None:intergenic 60.0%
CGTGGCGCTATTGAGTGCGA+TGG - chr8_4:1183827-1183846 Msa1306310:intron 60.0%
TGAGCCCTCCCTCAGTGAGT+AGG + chr8_4:1187571-1187590 None:intergenic 60.0%
CTCACTGAGGGAGGGCTCAA+AGG - chr8_4:1187572-1187591 Msa1306310:three_prime_UTR 60.0%
CACTGAGGGAGGGCTCAAAG+GGG - chr8_4:1187574-1187593 Msa1306310:three_prime_UTR 60.0%
CTCCGGTGCACTATCTGACC+AGG + chr8_4:1187615-1187634 None:intergenic 60.0%
CTGGTCAGATAGTGCACCGG+AGG - chr8_4:1187613-1187632 Msa1306310:three_prime_UTR 60.0%
GCACCGGAGGATTATGGACG+GGG - chr8_4:1187626-1187645 Msa1306310:three_prime_UTR 60.0%
CCCCTCAGCTGACGCAACAA+AGG + chr8_4:1188356-1188375 None:intergenic 60.0%
GCCCAGCACTTATTCCCTGC+TGG - chr8_4:1188890-1188909 Msa1306310:intron 60.0%
TTCCCTGCTGGTGAGCCTGT+AGG - chr8_4:1188902-1188921 Msa1306310:intron 60.0%
CACCTACAGGCTCACCAGCA+GGG + chr8_4:1188907-1188926 None:intergenic 60.0%
ACACCTACAGGCTCACCAGC+AGG + chr8_4:1188908-1188927 None:intergenic 60.0%
CTTTGCGTCTTCGCTGCTGC+TGG + chr8_4:1190335-1190354 None:intergenic 60.0%
CTGGGCAGATCATGTCAGCC+AGG + chr8_4:1192931-1192950 None:intergenic 60.0%
CGCGACACACCTAGTCCTAG+AGG + chr8_4:1193178-1193197 None:intergenic 60.0%
ACACTCCTTGGACCGGTGTC+TGG - chr8_4:1193286-1193305 Msa1306310:five_prime_UTR 60.0%
CCTCGGGTTACCCTAACACG+AGG + chr8_4:1193703-1193722 None:intergenic 60.0%
CCTCGTGTTAGGGTAACCCG+AGG - chr8_4:1193700-1193719 Msa1306310:intron 60.0%
CGAACCCATGTGTTCGTGCC+AGG + chr8_4:1194073-1194092 None:intergenic 60.0%
GGCGCTGCACACAGCACAAA+AGG + chr8_4:1195120-1195139 None:intergenic 60.0%
TCAGTGGCTGCCCCCACATG+CGG - chr8_4:1183737-1183756 Msa1306310:intron 65.0%
AGACGCCACACCGCATGTGG+GGG + chr8_4:1183750-1183769 None:intergenic 65.0%
GAGACGCCACACCGCATGTG+GGG + chr8_4:1183751-1183770 None:intergenic 65.0%
CTGAGACGCCACACCGCATG+TGG + chr8_4:1183753-1183772 None:intergenic 65.0%
AGCTGCCAGACACCGGTCCA+AGG + chr8_4:1193294-1193313 None:intergenic 65.0%
GGCTGCCCCCACATGCGGTG+TGG - chr8_4:1183742-1183761 Msa1306310:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 1180721 1195265 1180721 ID=Msa1306310;Name=Msa1306310
chr8_4 mRNA 1180721 1195265 1180721 ID=Msa1306310-mRNA-1;Parent=Msa1306310;Name=Msa1306310-mRNA-1;_AED=0.04;_eAED=0.04;_QI=238|1|1|1|0.8|0.68|16|2505|330
chr8_4 exon 1180721 1180850 1180721 ID=Msa1306310-mRNA-1:exon:250;Parent=Msa1306310-mRNA-1
chr8_4 exon 1181683 1181957 1181683 ID=Msa1306310-mRNA-1:exon:249;Parent=Msa1306310-mRNA-1
chr8_4 exon 1183012 1183130 1183012 ID=Msa1306310-mRNA-1:exon:248;Parent=Msa1306310-mRNA-1
chr8_4 exon 1184115 1184239 1184115 ID=Msa1306310-mRNA-1:exon:247;Parent=Msa1306310-mRNA-1
chr8_4 exon 1185585 1185657 1185585 ID=Msa1306310-mRNA-1:exon:246;Parent=Msa1306310-mRNA-1
chr8_4 exon 1186704 1186879 1186704 ID=Msa1306310-mRNA-1:exon:245;Parent=Msa1306310-mRNA-1
chr8_4 exon 1186971 1188862 1186971 ID=Msa1306310-mRNA-1:exon:244;Parent=Msa1306310-mRNA-1
chr8_4 exon 1188951 1189109 1188951 ID=Msa1306310-mRNA-1:exon:243;Parent=Msa1306310-mRNA-1
chr8_4 exon 1190294 1190464 1190294 ID=Msa1306310-mRNA-1:exon:242;Parent=Msa1306310-mRNA-1
chr8_4 exon 1191420 1191473 1191420 ID=Msa1306310-mRNA-1:exon:241;Parent=Msa1306310-mRNA-1
chr8_4 exon 1192748 1192863 1192748 ID=Msa1306310-mRNA-1:exon:240;Parent=Msa1306310-mRNA-1
chr8_4 exon 1192954 1193080 1192954 ID=Msa1306310-mRNA-1:exon:239;Parent=Msa1306310-mRNA-1
chr8_4 exon 1193200 1193308 1193200 ID=Msa1306310-mRNA-1:exon:238;Parent=Msa1306310-mRNA-1
chr8_4 exon 1194795 1194850 1194795 ID=Msa1306310-mRNA-1:exon:237;Parent=Msa1306310-mRNA-1
chr8_4 exon 1194982 1195049 1194982 ID=Msa1306310-mRNA-1:exon:236;Parent=Msa1306310-mRNA-1
chr8_4 exon 1195180 1195265 1195180 ID=Msa1306310-mRNA-1:exon:235;Parent=Msa1306310-mRNA-1
chr8_4 five_prime_UTR 1195180 1195265 1195180 ID=Msa1306310-mRNA-1:five_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 five_prime_UTR 1194982 1195049 1194982 ID=Msa1306310-mRNA-1:five_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 five_prime_UTR 1194795 1194850 1194795 ID=Msa1306310-mRNA-1:five_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 five_prime_UTR 1193281 1193308 1193281 ID=Msa1306310-mRNA-1:five_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 CDS 1193200 1193280 1193200 ID=Msa1306310-mRNA-1:cds;Parent=Msa1306310-mRNA-1
chr8_4 CDS 1192954 1193080 1192954 ID=Msa1306310-mRNA-1:cds;Parent=Msa1306310-mRNA-1
chr8_4 CDS 1192748 1192863 1192748 ID=Msa1306310-mRNA-1:cds;Parent=Msa1306310-mRNA-1
chr8_4 CDS 1191420 1191473 1191420 ID=Msa1306310-mRNA-1:cds;Parent=Msa1306310-mRNA-1
chr8_4 CDS 1190294 1190464 1190294 ID=Msa1306310-mRNA-1:cds;Parent=Msa1306310-mRNA-1
chr8_4 CDS 1188951 1189109 1188951 ID=Msa1306310-mRNA-1:cds;Parent=Msa1306310-mRNA-1
chr8_4 CDS 1188578 1188862 1188578 ID=Msa1306310-mRNA-1:cds;Parent=Msa1306310-mRNA-1
chr8_4 three_prime_UTR 1186971 1188577 1186971 ID=Msa1306310-mRNA-1:three_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 three_prime_UTR 1186704 1186879 1186704 ID=Msa1306310-mRNA-1:three_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 three_prime_UTR 1185585 1185657 1185585 ID=Msa1306310-mRNA-1:three_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 three_prime_UTR 1184115 1184239 1184115 ID=Msa1306310-mRNA-1:three_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 three_prime_UTR 1183012 1183130 1183012 ID=Msa1306310-mRNA-1:three_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 three_prime_UTR 1181683 1181957 1181683 ID=Msa1306310-mRNA-1:three_prime_utr;Parent=Msa1306310-mRNA-1
chr8_4 three_prime_UTR 1180721 1180850 1180721 ID=Msa1306310-mRNA-1:three_prime_utr;Parent=Msa1306310-mRNA-1
Gene Sequence

>Msa1306310

ATGGAAGATAATGCCACTACATCCCTTTTGGAAGGGAAGGTTGTTGGGATCCGCTTCAGTATGGCTACACGCCATGAAATTAGTACTGCATCAATTAGTGATTCCCAAATTAGCCATGCGAGTCAACTGGCTAATCCTTTCCTTGGGCTTCCACTTGAGTTTGGACGATGTGAATCTTGTGGCACTTCCGAAGCAGGAAAATGCGAAGGCCACTTTGGATATATTGAACTTCCAGTTCCTATTTATCATCCTAGCCATGTTACTGAGTTGAAGAAAATACTGAGCCTGGTCTGCTTAAGCTGCTTGCGATTGAAGAAAACCAAGGTACCTTCTTCAAGCAGTGGCTTGGCACAGAGATTATTATCTCCTTGCTGTGAGGATGTTAATGCTGCACAAGTTTCTATTCGGGAGGTCAAAACAGCTGATGGGGCTTGTTACTTGGCACTAAAGGTGTCAAAGTCAAAGATGCATGACGGATTTTGGACCTTTCTAGAAAAATATGGCTATCGCTATGGGGGAGATCATACTCGAGCTTTGCTTCCTTGTGAGGCAATGGAAATTATCAAGAGACTTCCTCAAGAAACAAAGAAGAAACTTGCGGGAAAGGGATATTTTCCTCAAGATGGATATATTTTAAAATACCTTCCTGTACCACCAAATTGCCTGTCTGTGCCAGTAGTTTCAGATGGTGTCAGTATCATGTCTTCGGATCCGGCCTTGACAATTCTCAGAAAATTGCTTAGGAAGGTTGAAGTCATCAGAAGTTCAAGATCTGGTGAACCAAACTTTGAGTCTCATCAAGTGGAAGCCAACGACTTGCAATCCGTGGTCGATCAGTATCTTCAAATCAGGGGAACTTCTAAGGCCGCACGTGATATTGAAACACACTACGGGGTTAACAAAGAGCTGAATGATTCCTCAACAAAAGCGTGGTTGGAAAAAATGAGGACGTTGTTTATCAGAAAGGGTTCGGGTTTTCTTCCCGGAATGTGA
Protein sequence

>Msa1306310

MEDNATTSLLEGKVVGIRFSMATRHEISTASISDSQISHASQLANPFLGLPLEFGRCESCGTSEAGKCEGHFGYIELPVPIYHPSHVTELKKILSLVCLSCLRLKKTKVPSSSSGLAQRLLSPCCEDVNAAQVSIREVKTADGACYLALKVSKSKMHDGFWTFLEKYGYRYGGDHTRALLPCEAMEIIKRLPQETKKKLAGKGYFPQDGYILKYLPVPPNCLSVPVVSDGVSIMSSDPALTILRKLLRKVEVIRSSRSGEPNFESHQVEANDLQSVVDQYLQIRGTSKAARDIETHYGVNKELNDSSTKAWLEKMRTLFIRKGSGFLPGM*