AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1324920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1324920 MtrunA17_Chr8g0358191 97.919 865 18 0 1 865 1 865 0.0 1752
Msa1324920 MtrunA17_Chr2g0312131 69.907 864 239 11 19 865 21 880 0.0 1084
Msa1324920 MtrunA17_Chr2g0312151 57.394 852 301 18 24 864 24 824 0.0 882
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1324920 AT1G79090.2 45.433 854 354 21 14 840 13 781 0.0 634
Msa1324920 AT1G79090.1 45.433 854 354 21 14 840 13 781 0.0 634
Msa1324920 AT1G79090.3 45.433 854 354 21 14 840 13 781 0.0 634
Msa1324920 AT4G14990.1 44.651 860 357 23 29 863 20 785 0.0 598
Msa1324920 AT3G22270.1 48.261 690 305 17 188 863 129 780 0.0 580
Msa1324920 AT4G14990.2 44.264 802 330 20 87 863 1 710 0.0 558

Find 250 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCAAGATCTTAATCTTT+TGG 0.196811 8_4:-36016749 Msa1324920:CDS
GAAGATGGTGATTAAATAAA+TGG 0.199044 8_4:+36012417 None:intergenic
GAAGACTTTGGTGCCAAAAT+TGG 0.214292 8_4:+36012863 None:intergenic
TTTGGTTGATCCATTGATTC+TGG 0.218872 8_4:+36012612 None:intergenic
CCAAGATGCGGCTCATATTT+TGG 0.219528 8_4:+36012683 None:intergenic
TAAACACGTCCATCCATAAA+AGG 0.222519 8_4:+36016806 None:intergenic
AATTGGGAAATCGTTCATTT+TGG 0.228135 8_4:-36011320 Msa1324920:CDS
AACTGGCCTGTACTGTAATT+TGG 0.236335 8_4:+36012794 None:intergenic
TGAAGAAAGATCCTTCATTT+TGG 0.246368 8_4:+36012118 None:intergenic
GAGGGGAGCCAGTATTAAAT+TGG 0.256524 8_4:+36012648 None:intergenic
TTCCCAAAAGATTAAGATCT+TGG 0.276626 8_4:+36016746 None:intergenic
AGAAGACATGTCTATGAGTT+TGG 0.276838 8_4:+36010449 None:intergenic
TTTCTTCAGGTTGATACTAT+AGG 0.283219 8_4:-36012065 Msa1324920:CDS
GTGATAATAATCATCAATAT+AGG 0.291904 8_4:+36012199 None:intergenic
CTCTTGCCCTAGGGGTGCAC+TGG 0.295180 8_4:-36010568 Msa1324920:three_prime_UTR
GCATCACAATATGCATTCTT+TGG 0.300944 8_4:-36016022 Msa1324920:CDS
CCACCACTGGCAGAGGAGTT+TGG 0.301095 8_4:+36011987 None:intergenic
AAGAAGAAGGAATGTCCTTT+TGG 0.304468 8_4:-36011808 Msa1324920:CDS
ACCATCCTCAATAGTGATTC+TGG 0.307128 8_4:+36011911 None:intergenic
CTTGTAGAAGATTGCACTTA+AGG 0.308720 8_4:+36011850 None:intergenic
TGATAATAATCATCAATATA+GGG 0.310085 8_4:+36012200 None:intergenic
TGGTTAGCATGTACAGGTTT+AGG 0.324703 8_4:-36010686 Msa1324920:three_prime_UTR
GAGATTTCTTCTGATGATAA+TGG 0.325143 8_4:-36010984 Msa1324920:three_prime_UTR
GTTGAGAGACCCGATGTTTA+CGG 0.327132 8_4:+36012351 None:intergenic
TTCTTCAGGTTGATACTATA+GGG 0.328913 8_4:-36012064 Msa1324920:CDS
CTCCAAGATACAACCCTGTT+TGG 0.338076 8_4:+36012594 None:intergenic
CAAGAATGAAGAAGAAGATT+AGG 0.349735 8_4:+36016843 None:intergenic
AACTTAGCCCAATTTAATAC+TGG 0.355465 8_4:-36012656 Msa1324920:CDS
CAGCGCTCTTCGCCTGTGGC+TGG 0.357870 8_4:-36011078 Msa1324920:CDS
TAAACATCGGGTCTCTCAAC+AGG 0.358638 8_4:-36012348 Msa1324920:CDS
TGAAGCTCTTGTTGCTTGTC+AGG 0.364348 8_4:+36012902 None:intergenic
CTAGTGAACCTGTTCCTAAC+TGG 0.377399 8_4:-36013045 Msa1324920:CDS
TGAGCCACACAGGTTTCTTC+AGG 0.378458 8_4:-36012078 Msa1324920:CDS
CTTGCACGCAAGAGCTCAAC+AGG 0.383233 8_4:+36011150 None:intergenic
CGCTAGGAGCTTCCGTCCCT+TGG 0.384276 8_4:+36011677 None:intergenic
TTGAGAGACCCGATGTTTAC+GGG 0.384740 8_4:+36012352 None:intergenic
TAATTCACCCTACCCTTTGT+AGG 0.386722 8_4:-36017009 None:intergenic
GAAGACATGTCTATGAGTTT+GGG 0.391924 8_4:+36010450 None:intergenic
CAGTTGAACAAAATTGTTAG+TGG 0.392481 8_4:-36014466 Msa1324920:CDS
CCCTTTCAGTTATGTATACA+AGG 0.393704 8_4:-36010639 Msa1324920:three_prime_UTR
AGCTCCTAGCGAAGTATCTT+CGG 0.394291 8_4:-36011665 Msa1324920:CDS
TGCAGCTGCCGTTGCTGCTC+AGG 0.395760 8_4:+36013088 None:intergenic
AAAGTTGTTCAATACAGTTC+AGG 0.397294 8_4:-36012298 Msa1324920:CDS
AAGATGGTGATTAAATAAAT+GGG 0.399467 8_4:+36012418 None:intergenic
TGTATACAAGGTGTGAAGGT+TGG 0.407178 8_4:-36010627 Msa1324920:three_prime_UTR
CAGTTGAACATTCCTTATGC+TGG 0.408226 8_4:-36012776 Msa1324920:CDS
TCCTCCATTTCACACATAGA+AGG 0.409307 8_4:-36012956 Msa1324920:CDS
TTTAATCACCATCTTCCGTC+TGG 0.411992 8_4:-36012410 Msa1324920:CDS
CGGTCCTTCTATGTGTGAAA+TGG 0.413888 8_4:+36012952 None:intergenic
GGAATGGATCTTGGTTCTCT+TGG 0.415037 8_4:-36011495 Msa1324920:CDS
CTGGGTTGACGAAGGTTCTC+AGG 0.418294 8_4:-36013194 Msa1324920:CDS
AACCAAACAGGGTTGTATCT+TGG 0.421123 8_4:-36012596 Msa1324920:CDS
TTAACTAGTTCCTATTCCTA+TGG 0.427455 8_4:+36010511 None:intergenic
ACCGCTACCGAACTTCTAAC+TGG 0.428408 8_4:-36011366 Msa1324920:CDS
GTATACAAGGTGTGAAGGTT+GGG 0.433004 8_4:-36010626 Msa1324920:three_prime_UTR
AAGATTAAGATCTTGGTTGT+TGG 0.433495 8_4:+36016753 None:intergenic
CAACAACTATACCATCATAA+TGG 0.434197 8_4:-36012539 Msa1324920:CDS
AATCAATGGATCAACCAAAC+AGG 0.438580 8_4:-36012608 Msa1324920:CDS
AAGAATGAAGAAGAAGATTA+GGG 0.438698 8_4:+36016844 None:intergenic
GTTGCCGAGGAAGTTGAGTT+GGG 0.442334 8_4:-36015992 Msa1324920:CDS
CACATGTTGACCAGTTTGGT+GGG 0.443086 8_4:-36010543 Msa1324920:three_prime_UTR
TTCAGAGAAGTCCCTTGAGC+AGG 0.448069 8_4:-36011949 Msa1324920:CDS
GGGACACATGTTGACCAGTT+TGG 0.448290 8_4:-36010547 Msa1324920:three_prime_UTR
CCAAAATATGAGCCGCATCT+TGG 0.448655 8_4:-36012683 Msa1324920:CDS
TGGTGGGCAACTCTTGCCCT+AGG 0.450058 8_4:-36010578 Msa1324920:three_prime_UTR
TGATCAAACCAGTTAGGAAC+AGG 0.452768 8_4:+36013037 None:intergenic
AAGCCAGCTGACGCTTGAAC+AGG 0.455440 8_4:+36012458 None:intergenic
ATTCAATTCTGCGTCACACT+TGG 0.457252 8_4:-36012711 Msa1324920:CDS
CAGCATAAGGAATGTTCAAC+TGG 0.458036 8_4:+36012777 None:intergenic
TGTGTCCATTCTTTCCTAGC+GGG 0.459607 8_4:+36011754 None:intergenic
CAGATTCCTCTGCTTCTGAA+TGG 0.459616 8_4:-36013240 Msa1324920:CDS
TGCTGCTAAAGTAGTTAGTA+AGG 0.462439 8_4:-36011178 Msa1324920:CDS
TATCTTCGGTTGCTTGATCC+TGG 0.463629 8_4:-36011651 Msa1324920:CDS
TTGAGAACCAGTTAGAAGTT+CGG 0.463987 8_4:+36011359 None:intergenic
CTCGGAAGTCCTGCTGGAGA+TGG 0.466408 8_4:-36011420 Msa1324920:CDS
GCTGGATTTAACAGCTATGC+TGG 0.469530 8_4:-36011060 Msa1324920:CDS
TGCTGCTGTTGCTGCAACTG+AGG 0.472389 8_4:+36012494 None:intergenic
TGCAGGAGTTATCGGTGATC+GGG 0.474133 8_4:-36014434 Msa1324920:CDS
AGTTGAACATTCCTTATGCT+GGG 0.475705 8_4:-36012775 Msa1324920:CDS
ACACATGTTGACCAGTTTGG+TGG 0.476362 8_4:-36010544 Msa1324920:three_prime_UTR
GAACAAAATGTGGCTGCGAT+TGG 0.476470 8_4:-36011207 Msa1324920:CDS
AGAGGGATGATGTTCCCTAC+TGG 0.478742 8_4:-36013213 Msa1324920:CDS
TATCCTGTTCAAGCGTCAGC+TGG 0.480209 8_4:-36012461 Msa1324920:CDS
GCGTCAGCTGGCTTAATGTC+AGG 0.483312 8_4:-36012449 Msa1324920:CDS
TGGTGCTTGTCTTGCAGCAG+TGG 0.485257 8_4:-36011475 Msa1324920:CDS
CGCTCAGCGCTCTTCGCCTG+TGG 0.486337 8_4:-36011082 Msa1324920:CDS
ATAATCGAATCCAGAATCAA+TGG 0.492251 8_4:-36012622 Msa1324920:CDS
AAAATCAACCCGTAAACATC+GGG 0.492540 8_4:-36012360 Msa1324920:CDS
CACTAGTGGTTAGCATGTAC+AGG 0.493076 8_4:-36010692 Msa1324920:three_prime_UTR
CGAACAATGGCTCCTGCTCA+AGG 0.493113 8_4:+36011937 None:intergenic
GTATTTCAGCCCCACCAAAC+TGG 0.494004 8_4:+36010533 None:intergenic
CTCAGAGCCACCACTGGCAG+AGG 0.494329 8_4:+36011980 None:intergenic
CACTAGAGCGATGTTGGAGT+TGG 0.494465 8_4:+36013062 None:intergenic
CAGGTTCACTAGAGCGATGT+TGG 0.494487 8_4:+36013056 None:intergenic
CATTGCAGACGGATGATGTA+AGG 0.494656 8_4:-36015350 Msa1324920:intron
GGCTGAAATACCATAGGAAT+AGG 0.495436 8_4:-36010521 Msa1324920:three_prime_UTR
CTGCCGTTGCTGCTCAGGAT+AGG 0.495545 8_4:+36013093 None:intergenic
GGTGGGCAACTCTTGCCCTA+GGG 0.503240 8_4:-36010577 Msa1324920:three_prime_UTR
AATTCACCCTACCCTTTGTA+GGG 0.504223 8_4:-36017008 None:intergenic
TGTATCGAAGGAATGGATCT+TGG 0.508446 8_4:-36011504 Msa1324920:CDS
CTCTGCTGCTGCTGAATCAG+AGG 0.508948 8_4:+36011560 None:intergenic
AACTGTTGATCAAACCAGTT+AGG 0.511367 8_4:+36013031 None:intergenic
ACGACTAGCATCTATTTCCA+AGG 0.513088 8_4:-36011694 Msa1324920:CDS
TGGATGATCCAGACGGAAGA+TGG 0.513797 8_4:+36012402 None:intergenic
TAAGAAGTAAATGAAGACTT+TGG 0.515235 8_4:+36012851 None:intergenic
AAATATGAGCCGCATCTTGG+TGG 0.515281 8_4:-36012680 Msa1324920:CDS
TGTTGCCGAGGAAGTTGAGT+TGG 0.515351 8_4:-36015993 Msa1324920:CDS
TAAGAAGACAAGGTCATCCT+TGG 0.516956 8_4:+36011716 None:intergenic
AGGGGAGCCAGTATTAAATT+GGG 0.517070 8_4:+36012649 None:intergenic
GTGCAGGAGTTATCGGTGAT+CGG 0.518077 8_4:-36014435 Msa1324920:CDS
GCTGCAACATATTATTCAGA+AGG 0.518499 8_4:+36012561 None:intergenic
TTGTCTATTCTCTCTAACGA+TGG 0.519497 8_4:+36012382 None:intergenic
TTCAATTCTGCGTCACACTT+GGG 0.523618 8_4:-36012710 Msa1324920:CDS
CTAGTAATAACTTTCTCTGC+CGG 0.526180 8_4:+36011109 None:intergenic
TAACTTTCTCTGCCGGTCGT+TGG 0.528752 8_4:+36011116 None:intergenic
CCAAACTCCTCTGCCAGTGG+TGG 0.529316 8_4:-36011987 Msa1324920:CDS
GAGGGATGATGTTCCCTACT+GGG 0.533048 8_4:-36013212 Msa1324920:CDS
TCTGGATTCGATTATTGAGA+GGG 0.533592 8_4:+36012630 None:intergenic
CCAGAGTATCATGCAGTCAC+TGG 0.534028 8_4:-36011241 Msa1324920:CDS
CCTTGTATACATAACTGAAA+GGG 0.534156 8_4:+36010639 None:intergenic
AGAGGGCGAGGCTGACGAAT+GGG 0.534806 8_4:+36012026 None:intergenic
GGAAAGAATGGACACAAAGC+TGG 0.534908 8_4:-36011747 Msa1324920:CDS
AAACCTGTGTGGCTCAGTAT+TGG 0.535430 8_4:+36012085 None:intergenic
GTGGACCCGCTAGGAAAGAA+TGG 0.535796 8_4:-36011759 Msa1324920:CDS
CTCTGCCGGTCGTTGGTGTG+AGG 0.535838 8_4:+36011123 None:intergenic
TCTTGCCCTAGGGGTGCACT+GGG 0.536125 8_4:-36010567 Msa1324920:three_prime_UTR
TTGTCAGTGTATCGAAGGAA+TGG 0.536739 8_4:-36011511 Msa1324920:CDS
AAACACGTCCATCCATAAAA+GGG 0.539324 8_4:+36016807 None:intergenic
GAACTCAATTCACAAGAAGA+AGG 0.539787 8_4:-36011821 Msa1324920:CDS
CCAGTGACTGCATGATACTC+TGG 0.541700 8_4:+36011241 None:intergenic
AAACAACCTCTTCTTCATTG+TGG 0.543127 8_4:+36015909 None:intergenic
GTGGGCAACTCTTGCCCTAG+GGG 0.543197 8_4:-36010576 Msa1324920:three_prime_UTR
TATTCATGCAATACTTTGTG+AGG 0.544965 8_4:+36011268 None:intergenic
GTCTTCCTCACACCAACGAC+CGG 0.545146 8_4:-36011128 Msa1324920:CDS
ATGTGTCCCAGTGCACCCCT+AGG 0.553291 8_4:+36010561 None:intergenic
TGTGTCTACGAAAAGTCTCA+TGG 0.555839 8_4:+36010713 None:intergenic
AAGTGCAATCTTCTACAAGA+TGG 0.555960 8_4:-36011846 Msa1324920:CDS
AAGAGGGCGAGGCTGACGAA+TGG 0.556679 8_4:+36012025 None:intergenic
CTTCATCTCGTGGACCCGCT+AGG 0.557773 8_4:-36011768 Msa1324920:CDS
ATCCGCACAAGCTCACTACC+AGG 0.557985 8_4:+36011633 None:intergenic
CATCTCCAGCAGGACTTCCG+AGG 0.559113 8_4:+36011421 None:intergenic
GCCGAGGAAGTTGAGTTGGG+GGG 0.559712 8_4:-36015989 Msa1324920:CDS
CCTCCAAACTCCTCTGCCAG+TGG 0.560112 8_4:-36011990 Msa1324920:CDS
GTGTGGCTCAGTATTGGCAC+GGG 0.560334 8_4:+36012091 None:intergenic
CGCAGCCAGAATCACTATTG+AGG 0.560701 8_4:-36011916 Msa1324920:CDS
TCTTCTCCAAATTACAGTAC+AGG 0.561121 8_4:-36012800 Msa1324920:CDS
CTTCCTATCCTGAGCAGCAA+CGG 0.561363 8_4:-36013096 Msa1324920:CDS
GAGAGAGAGAACCCTACAAA+GGG 0.562047 8_4:+36016997 None:intergenic
ATAGGAAGATGTTCTGTACA+AGG 0.562178 8_4:+36013111 None:intergenic
ATCTCCAGCAGGACTTCCGA+GGG 0.562988 8_4:+36011422 None:intergenic
AATTCTGCGTCACACTTGGG+TGG 0.563960 8_4:-36012707 Msa1324920:CDS
CAAATGCCAACACATTCTCA+TGG 0.563991 8_4:+36010842 None:intergenic
ATGCAGTCACTGGTTATACA+AGG 0.564011 8_4:-36011231 Msa1324920:CDS
ACCTTGTATACATAACTGAA+AGG 0.568400 8_4:+36010638 None:intergenic
ACCAGTTAGAAGTTCGGTAG+CGG 0.568400 8_4:+36011365 None:intergenic
GATAATAATCATCAATATAG+GGG 0.569599 8_4:+36012201 None:intergenic
GTGAAACTGTTGATGATGAC+AGG 0.569903 8_4:-36013000 Msa1324920:CDS
TGTGTGGCTCAGTATTGGCA+CGG 0.570357 8_4:+36012090 None:intergenic
GACTGCCAGTGATCTTGCTA+TGG 0.571406 8_4:-36011538 Msa1324920:CDS
GCTTGTGCGGATTGTCTGCA+TGG 0.572543 8_4:-36011622 Msa1324920:CDS
TAGTAATAGTCATGTGAACT+CGG 0.573104 8_4:-36011031 Msa1324920:CDS
TGCTTCTGAATGGTCACAGA+GGG 0.573238 8_4:-36013230 Msa1324920:CDS
GTTGTTTGTCAGTGTATCGA+AGG 0.578563 8_4:-36011516 Msa1324920:CDS
TCAGCTTCAAGAAGAGGGCG+AGG 0.578977 8_4:+36012014 None:intergenic
TTCTGGATTCGATTATTGAG+AGG 0.579609 8_4:+36012629 None:intergenic
ATGTTGCTAGTCCTTCCAAA+AGG 0.580287 8_4:+36011793 None:intergenic
GGAGGATCAGCTTCAAGAAG+AGG 0.581213 8_4:+36012008 None:intergenic
TTCAAATCTAATGATGATGA+TGG 0.581716 8_4:-36010598 Msa1324920:three_prime_UTR
TAACTGAAAGGGAACATCAT+GGG 0.582373 8_4:+36010650 None:intergenic
CGAGAACAGATACTAAAACA+AGG 0.582603 8_4:+36011391 None:intergenic
TCCTTCTATGTGTGAAATGG+AGG 0.583208 8_4:+36012955 None:intergenic
GTTATGTATACAAGGTGTGA+AGG 0.583812 8_4:-36010631 Msa1324920:three_prime_UTR
AATTTAAATTTAGCCCCAGA+AGG 0.584122 8_4:+36012155 None:intergenic
CTGGATTTAACAGCTATGCT+GGG 0.584302 8_4:-36011059 Msa1324920:CDS
AGAACCTTCGTCAACCCAGT+AGG 0.585118 8_4:+36013198 None:intergenic
TTGCCGAGGAAGTTGAGTTG+GGG 0.585256 8_4:-36015991 Msa1324920:CDS
TATGAAGATGTTCTATGCAA+GGG 0.586515 8_4:+36012926 None:intergenic
TCCTCGTTGAACGTAACAGA+AGG 0.588971 8_4:+36015941 None:intergenic
TATACAAGGGGAACAAAATG+TGG 0.589541 8_4:-36011217 Msa1324920:CDS
GTGATTCTGGCTGCGAACAA+TGG 0.590298 8_4:+36011924 None:intergenic
GAGGATCAGCTTCAAGAAGA+GGG 0.592242 8_4:+36012009 None:intergenic
ATAACTGAAAGGGAACATCA+TGG 0.592260 8_4:+36010649 None:intergenic
TGCCGAGGAAGTTGAGTTGG+GGG 0.592626 8_4:-36015990 Msa1324920:CDS
AACAACCATAGCAAGATCAC+TGG 0.593312 8_4:+36011533 None:intergenic
AATTCGCTCAGAGCCACCAC+TGG 0.594495 8_4:+36011974 None:intergenic
GATGTTCTATGCAAGGGCAT+CGG 0.595079 8_4:+36012932 None:intergenic
GAACCTTCGTCAACCCAGTA+GGG 0.595113 8_4:+36013199 None:intergenic
ATATGAAGATGTTCTATGCA+AGG 0.596969 8_4:+36012925 None:intergenic
TTGAACATTCCTTATGCTGG+GGG 0.597694 8_4:-36012773 Msa1324920:CDS
TCTGCTGCTGCTGAATCAGA+GGG 0.597695 8_4:+36011561 None:intergenic
GAGACACTGATCCATTATGA+TGG 0.598684 8_4:+36012528 None:intergenic
GAACAATGGCTCCTGCTCAA+GGG 0.600139 8_4:+36011938 None:intergenic
GCCAGAATCACTATTGAGGA+TGG 0.600876 8_4:-36011912 Msa1324920:CDS
ACATGTTGACCAGTTTGGTG+GGG 0.601818 8_4:-36010542 Msa1324920:three_prime_UTR
CTCCAGCAGGACTTCCGAGG+GGG 0.602256 8_4:+36011424 None:intergenic
GAGAACAGATACTAAAACAA+GGG 0.602558 8_4:+36011392 None:intergenic
TGTGTCCCAGTGCACCCCTA+GGG 0.603607 8_4:+36010562 None:intergenic
AGCAACATCACTTCATCTCG+TGG 0.604594 8_4:-36011778 Msa1324920:CDS
CGACTAGCATCTATTTCCAA+GGG 0.604906 8_4:-36011693 Msa1324920:CDS
TTCTGTTACGTTCAACGAGG+AGG 0.605235 8_4:-36015939 Msa1324920:CDS
AGGGAAGCACCATCTCCAGC+AGG 0.606600 8_4:+36011411 None:intergenic
TGCAATCTTCTACAAGATGG+TGG 0.606608 8_4:-36011843 Msa1324920:CDS
CAAAGCTGGTCTTACTGCCA+AGG 0.607057 8_4:-36011733 Msa1324920:CDS
TAGCTGTTAAATCCAGCCAC+AGG 0.608075 8_4:+36011066 None:intergenic
CTGTGACCATTCAGAAGCAG+AGG 0.609822 8_4:+36013234 None:intergenic
AACAGAAGAATGTGGATGTG+AGG 0.610554 8_4:+36013156 None:intergenic
TGGTGGGGCTGAAATACCAT+AGG 0.610626 8_4:-36010527 Msa1324920:three_prime_UTR
GTTGAACATTCCTTATGCTG+GGG 0.612073 8_4:-36012774 Msa1324920:CDS
GCGCAGAGGAGGAGGCTCTG+AGG 0.612695 8_4:+36011446 None:intergenic
TGCAACTGAGGCAGTAAGTG+AGG 0.614026 8_4:+36012506 None:intergenic
ATCCTGGTAGTGAGCTTGTG+CGG 0.616887 8_4:-36011635 Msa1324920:CDS
GAAAATGCAAGTTGCATCTG+TGG 0.617670 8_4:-36010882 Msa1324920:three_prime_UTR
AGAGAGAGAGAACCCTACAA+AGG 0.620591 8_4:+36016996 None:intergenic
TTGTGTCCATTCTTTCCTAG+CGG 0.620857 8_4:+36011753 None:intergenic
TGCAGTCACTGGTTATACAA+GGG 0.621051 8_4:-36011230 Msa1324920:CDS
ATGTGTGAAATGGAGGAATG+TGG 0.622182 8_4:+36012962 None:intergenic
AAATCTAATGATGATGATGG+TGG 0.623644 8_4:-36010595 Msa1324920:three_prime_UTR
CTGGATTCGATTATTGAGAG+GGG 0.625199 8_4:+36012631 None:intergenic
AATCTAATGATGATGATGGT+GGG 0.626117 8_4:-36010594 Msa1324920:three_prime_UTR
CCACTGGCAGAGGAGTTTGG+AGG 0.626147 8_4:+36011990 None:intergenic
CTGTTGATGATGACAGGAGA+TGG 0.626700 8_4:-36012994 Msa1324920:CDS
GTTCCCTACTGGGTTGACGA+AGG 0.630649 8_4:-36013202 Msa1324920:CDS
GCAGTCACTGGTTATACAAG+GGG 0.630832 8_4:-36011229 Msa1324920:CDS
TAGCATCTATTTCCAAGGGA+CGG 0.631807 8_4:-36011689 Msa1324920:CDS
TTCAGGTTGATACTATAGGG+AGG 0.634635 8_4:-36012061 Msa1324920:CDS
AAACATCGGGTCTCTCAACA+GGG 0.634864 8_4:-36012347 Msa1324920:CDS
GCAACCGAAGATACTTCGCT+AGG 0.636428 8_4:+36011661 None:intergenic
TAAATAAAATAAAAGACATG+AGG 0.637578 8_4:+36010762 None:intergenic
GTTGACGAAGGTTCTCAGGA+TGG 0.639257 8_4:-36013190 Msa1324920:CDS
CCGAGGAAGTTGAGTTGGGG+GGG 0.641319 8_4:-36015988 Msa1324920:CDS
ATCAATGGATCAACCAAACA+GGG 0.642698 8_4:-36012607 Msa1324920:CDS
ATGCTAGTCGTAAGAAGACA+AGG 0.646716 8_4:+36011706 None:intergenic
GCTAAGTTTCCACCAAGATG+CGG 0.646884 8_4:+36012671 None:intergenic
AATGTACTTGAACAGATGCA+AGG 0.647061 8_4:+36010924 None:intergenic
AGATGGTGATTAAATAAATG+GGG 0.649809 8_4:+36012419 None:intergenic
TAGGAAGATGTTCTGTACAA+GGG 0.654837 8_4:+36013112 None:intergenic
AATGCAAGTTGCATCTGTGG+CGG 0.658591 8_4:-36010879 Msa1324920:three_prime_UTR
ATGATTCCATGAGAATGTGT+TGG 0.665587 8_4:-36010848 Msa1324920:three_prime_UTR
CCTCGTTGAACGTAACAGAA+GGG 0.666944 8_4:+36015942 None:intergenic
CTAACGATGGATGATCCAGA+CGG 0.670278 8_4:+36012395 None:intergenic
GTGCCAATACTGAGCCACAC+AGG 0.671643 8_4:-36012088 Msa1324920:CDS
CTTTGGTAAAGATGTTGCCG+AGG 0.671645 8_4:-36016005 Msa1324920:CDS
GTTCTCAGGATGGCAAACGA+TGG 0.677888 8_4:-36013180 Msa1324920:CDS
CCCTTCTGTTACGTTCAACG+AGG 0.684228 8_4:-36015942 Msa1324920:CDS
ATATGAGCAACAGAAGAATG+TGG 0.697566 8_4:+36013148 None:intergenic
CTGCTTCTGAATGGTCACAG+AGG 0.709939 8_4:-36013231 Msa1324920:CDS
TCTCCAGCAGGACTTCCGAG+GGG 0.719904 8_4:+36011423 None:intergenic
CTGCTGCTGCTGAATCAGAG+GGG 0.723332 8_4:+36011562 None:intergenic
GATCAATATCATCTACATCG+AGG 0.731586 8_4:+36011877 None:intergenic
TCAACCTGAAGAAACCTGTG+TGG 0.743908 8_4:+36012074 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTCAAATATAACATT+TGG + chr8_4:36011867-36011886 None:intergenic 10.0%
!!! TTTTTTTTGTAAAATTACTT+TGG - chr8_4:36013096-36013115 Msa1324920:CDS 10.0%
!!! TTTTTTTGTAAAATTACTTT+GGG - chr8_4:36013097-36013116 Msa1324920:CDS 10.0%
!!! TTATAAAGTAAGAATTTTTA+GGG + chr8_4:36013302-36013321 None:intergenic 10.0%
!! AAAAAAATTAATAAAATCAG+AGG + chr8_4:36013472-36013491 None:intergenic 10.0%
!!! TTTTTGTAGTTTTTACTTTA+TGG - chr8_4:36010735-36010754 Msa1324920:three_prime_UTR 15.0%
!!! TTTTGTAGTTTTTACTTTAT+GGG - chr8_4:36010736-36010755 Msa1324920:three_prime_UTR 15.0%
!!! ATAACTGTATTTATTTTGAT+TGG - chr8_4:36010952-36010971 Msa1324920:three_prime_UTR 15.0%
!!! CATTATTTTTCTTTACTTAT+TGG - chr8_4:36011284-36011303 Msa1324920:CDS 15.0%
!! AAATTAGAAAGAAAAAAATG+TGG + chr8_4:36011549-36011568 None:intergenic 15.0%
!!! TTCTAATTTCAAATTTTATG+TGG - chr8_4:36011560-36011579 Msa1324920:CDS 15.0%
!!! TGTTATATTTGAATTTTATC+TGG - chr8_4:36011869-36011888 Msa1324920:CDS 15.0%
!! TTAATTATAGATTAGTATGT+TGG - chr8_4:36012193-36012212 Msa1324920:CDS 15.0%
!!! CATAATTTTTTTTAGTTAAG+AGG + chr8_4:36012242-36012261 None:intergenic 15.0%
!!! TTTTTTGTAAAATTACTTTG+GGG - chr8_4:36013098-36013117 Msa1324920:CDS 15.0%
!!! ATTAACAATGAATTTTAAGT+AGG + chr8_4:36013246-36013265 None:intergenic 15.0%
!!! GTTATAAAGTAAGAATTTTT+AGG + chr8_4:36013303-36013322 None:intergenic 15.0%
!!! AAATTCTTAATATGTCATTT+TGG - chr8_4:36013400-36013419 Msa1324920:intron 15.0%
!!! AATTCTTAATATGTCATTTT+GGG - chr8_4:36013401-36013420 Msa1324920:intron 15.0%
!! AAAAAAAACTCGATAAATAA+CGG + chr8_4:36013530-36013549 None:intergenic 15.0%
!!! TATTTATCGAGTTTTTTTTT+TGG - chr8_4:36013531-36013550 Msa1324920:intron 15.0%
!!! ATTTATCGAGTTTTTTTTTT+GGG - chr8_4:36013532-36013551 Msa1324920:intron 15.0%
!!! TAATTTGTTAGATAACATTT+TGG - chr8_4:36013987-36014006 Msa1324920:intron 15.0%
!! TGATAATAATCATCAATATA+GGG + chr8_4:36015221-36015240 None:intergenic 15.0%
!! TAAATAAAATAAAAGACATG+AGG + chr8_4:36016659-36016678 None:intergenic 15.0%
!!! TTTGTAGTTTTTACTTTATG+GGG - chr8_4:36010737-36010756 Msa1324920:three_prime_UTR 20.0%
!!! TTTTGTTTTTGTTTTTGTTG+TGG - chr8_4:36010781-36010800 Msa1324920:three_prime_UTR 20.0%
!!! TTACTATAAAACAGTGATTT+TGG - chr8_4:36011034-36011053 Msa1324920:CDS 20.0%
!! AAATTATGGATACAATCAAA+TGG + chr8_4:36011821-36011840 None:intergenic 20.0%
!! TCAATAACTATTGCAAATTA+TGG + chr8_4:36011835-36011854 None:intergenic 20.0%
!! TATCAAATTTCAAAATGTTG+AGG + chr8_4:36011913-36011932 None:intergenic 20.0%
!!! AATTTTTTTTAGTTAAGAGG+AGG + chr8_4:36012239-36012258 None:intergenic 20.0%
!! AAATAGATAGGATAGAAATA+AGG - chr8_4:36012293-36012312 Msa1324920:CDS 20.0%
!!! TGTTTAGATATCTGTTTTAT+AGG + chr8_4:36012343-36012362 None:intergenic 20.0%
!! ATTAAAGTAAAGGGAAATAA+GGG + chr8_4:36012838-36012857 None:intergenic 20.0%
!! TAATGTGTTAAAAACTACTT+TGG - chr8_4:36013145-36013164 Msa1324920:CDS 20.0%
!! AATGTGTTAAAAACTACTTT+GGG - chr8_4:36013146-36013165 Msa1324920:CDS 20.0%
!! TAAAAAATAATCTGTAGTTG+TGG - chr8_4:36013491-36013510 Msa1324920:intron 20.0%
!! TCTAAGTGAAATTTGTATTT+AGG - chr8_4:36014033-36014052 Msa1324920:intron 20.0%
!! AAGATGGTGATTAAATAAAT+GGG + chr8_4:36015003-36015022 None:intergenic 20.0%
!! GATAATAATCATCAATATAG+GGG + chr8_4:36015220-36015239 None:intergenic 20.0%
!! GTGATAATAATCATCAATAT+AGG + chr8_4:36015222-36015241 None:intergenic 20.0%
!!! CGTCATTTAAGATTTTTATT+CGG - chr8_4:36015827-36015846 Msa1324920:intron 20.0%
!!! TTGTGATATATTTTACTTTC+AGG - chr8_4:36016596-36016615 Msa1324920:intron 20.0%
!!! GTCTTTTATTTTATTTACGA+CGG - chr8_4:36016662-36016681 Msa1324920:intron 20.0%
!!! TCTTTTATTTTATTTACGAC+GGG - chr8_4:36016663-36016682 Msa1324920:intron 20.0%
! ATATGTATGAATGTGAATGA+AGG + chr8_4:36010482-36010501 None:intergenic 25.0%
! AAGAATGAAGAAGAAGATTA+GGG + chr8_4:36010577-36010596 None:intergenic 25.0%
!! AACCAAGATCTTAATCTTTT+GGG - chr8_4:36010670-36010689 Msa1324920:three_prime_UTR 25.0%
!! AACAGTGATTTTGGATTAAT+AGG - chr8_4:36011043-36011062 Msa1324920:CDS 25.0%
!! ACAGTGATTTTGGATTAATA+GGG - chr8_4:36011044-36011063 Msa1324920:CDS 25.0%
! TCAAATTATCATCTATGTTG+AGG - chr8_4:36011159-36011178 Msa1324920:CDS 25.0%
! TGTTAATGAAAGATCAATCA+AGG + chr8_4:36011771-36011790 None:intergenic 25.0%
! ATGGTTTGAAAAAATGCTTT+GGG + chr8_4:36011802-36011821 None:intergenic 25.0%
! AATGGTTTGAAAAAATGCTT+TGG + chr8_4:36011803-36011822 None:intergenic 25.0%
!!! ATGTTGGTGACTTTTTATTT+TGG - chr8_4:36012209-36012228 Msa1324920:CDS 25.0%
!!! TGTTGGTGACTTTTTATTTT+GGG - chr8_4:36012210-36012229 Msa1324920:CDS 25.0%
!!! TTTAAATGCAGTTTTGATAG+TGG - chr8_4:36012406-36012425 Msa1324920:CDS 25.0%
! ATCAATCAACAGTAAGTTAT+TGG + chr8_4:36012478-36012497 None:intergenic 25.0%
!! AAACAGAATATAACGTTTTC+TGG + chr8_4:36012607-36012626 None:intergenic 25.0%
! CATTAAAGTAAAGGGAAATA+AGG + chr8_4:36012839-36012858 None:intergenic 25.0%
! TTCCAGAACATTAAAGTAAA+GGG + chr8_4:36012847-36012866 None:intergenic 25.0%
! TTTCCAGAACATTAAAGTAA+AGG + chr8_4:36012848-36012867 None:intergenic 25.0%
! ATGTGTTAAAAACTACTTTG+GGG - chr8_4:36013147-36013166 Msa1324920:CDS 25.0%
!! AGTAGGTTTTCAGAAAATAA+TGG + chr8_4:36013229-36013248 None:intergenic 25.0%
! TTAATAAAATCAGAGGAATC+TGG + chr8_4:36013465-36013484 None:intergenic 25.0%
!!! AGTTTTAATGGTTTTACAAG+TGG - chr8_4:36013696-36013715 Msa1324920:intron 25.0%
!! ATTTTTCTGACTCTTTCTTT+TGG + chr8_4:36013736-36013755 None:intergenic 25.0%
!! TTTTAGTAACCACGATAATA+TGG - chr8_4:36013803-36013822 Msa1324920:intron 25.0%
! AACCATAATAATATTTCGTC+TGG - chr8_4:36013850-36013869 Msa1324920:intron 25.0%
! ACCATAATAATATTTCGTCT+GGG - chr8_4:36013851-36013870 Msa1324920:intron 25.0%
!!! TTTTTTGAGTGAACCAATTT+TGG - chr8_4:36014542-36014561 Msa1324920:intron 25.0%
! TAAGAAGTAAATGAAGACTT+TGG + chr8_4:36014570-36014589 None:intergenic 25.0%
! AGATGGTGATTAAATAAATG+GGG + chr8_4:36015002-36015021 None:intergenic 25.0%
! GAAGATGGTGATTAAATAAA+TGG + chr8_4:36015004-36015023 None:intergenic 25.0%
!!! TTCTGATGATAATGGTTTTT+TGG - chr8_4:36016442-36016461 Msa1324920:intron 25.0%
!!! TCTGATGATAATGGTTTTTT+GGG - chr8_4:36016443-36016462 Msa1324920:intron 25.0%
!!! CTTTTATTTTATTTACGACG+GGG - chr8_4:36016664-36016683 Msa1324920:intron 25.0%
!!! TTTTATTTTATTTACGACGG+GGG - chr8_4:36016665-36016684 Msa1324920:intron 25.0%
!! TTCAAATCTAATGATGATGA+TGG - chr8_4:36016820-36016839 Msa1324920:five_prime_UTR 25.0%
GATTGTGATTGTGATGATTA+GGG + chr8_4:36010510-36010529 None:intergenic 30.0%
TGATTGTGATTGTGATGATT+AGG + chr8_4:36010511-36010530 None:intergenic 30.0%
CAAGAATGAAGAAGAAGATT+AGG + chr8_4:36010578-36010597 None:intergenic 30.0%
! GTTTTTCTGTTACCCTTTTA+TGG - chr8_4:36010599-36010618 Msa1324920:three_prime_UTR 30.0%
AAGATTAAGATCTTGGTTGT+TGG + chr8_4:36010668-36010687 None:intergenic 30.0%
! CAACCAAGATCTTAATCTTT+TGG - chr8_4:36010669-36010688 Msa1324920:three_prime_UTR 30.0%
TTCCCAAAAGATTAAGATCT+TGG + chr8_4:36010675-36010694 None:intergenic 30.0%
!! CTTTTGGGAAATCTTACTAA+AGG - chr8_4:36010685-36010704 Msa1324920:three_prime_UTR 30.0%
!! TTGTGGTTTGTTGTTTGATT+AGG - chr8_4:36010798-36010817 Msa1324920:three_prime_UTR 30.0%
!! TGTGGTTTGTTGTTTGATTA+GGG - chr8_4:36010799-36010818 Msa1324920:three_prime_UTR 30.0%
! TTTAGTTTAGTGTTCTTGCA+TGG - chr8_4:36010871-36010890 Msa1324920:three_prime_UTR 30.0%
TATAGATGTGACTGCATTAT+AGG - chr8_4:36010992-36011011 Msa1324920:three_prime_UTR 30.0%
ATAGATGTGACTGCATTATA+GGG - chr8_4:36010993-36011012 Msa1324920:three_prime_UTR 30.0%
! CATTATAGGGTTCTTGATTT+TGG - chr8_4:36011006-36011025 Msa1324920:exon 30.0%
! AAAGTACTCAAACTCATCTT+AGG + chr8_4:36011241-36011260 None:intergenic 30.0%
! ATTTTCTGTTGTTATGCAGA+TGG - chr8_4:36011360-36011379 Msa1324920:CDS 30.0%
!! GAAAAAATGCTTTGGGAAAA+TGG + chr8_4:36011795-36011814 None:intergenic 30.0%
ATTACTCATGTTTGTCCTTT+AGG + chr8_4:36011991-36012010 None:intergenic 30.0%
! CTCAAAATGCTTGAGATTTT+TGG - chr8_4:36012166-36012185 Msa1324920:CDS 30.0%
TAGAAATAAGGTACAGTTAG+TGG - chr8_4:36012305-36012324 Msa1324920:CDS 30.0%
ACAGATATCTAAACAGTTAG+TGG - chr8_4:36012348-36012367 Msa1324920:CDS 30.0%
AGTGGTAAACTTGATTGATA+AGG - chr8_4:36012424-36012443 Msa1324920:CDS 30.0%
! TAACTTACTGTTGATTGATC+AGG - chr8_4:36012479-36012498 Msa1324920:CDS 30.0%
! AACTTACTGTTGATTGATCA+GGG - chr8_4:36012480-36012499 Msa1324920:CDS 30.0%
TTCCCTTTACTTTAATGTTC+TGG - chr8_4:36012842-36012861 Msa1324920:CDS 30.0%
CAGTTGAACAAAATTGTTAG+TGG - chr8_4:36012952-36012971 Msa1324920:CDS 30.0%
!! ATTTTGGGTCTTCAAAATCA+AGG - chr8_4:36013416-36013435 Msa1324920:intron 30.0%
!! TTTTGGGTCTTCAAAATCAA+GGG - chr8_4:36013417-36013436 Msa1324920:intron 30.0%
TTCAAAATCAAGGGGAAATT+GGG - chr8_4:36013426-36013445 Msa1324920:intron 30.0%
!!! AAGCTAGCTTGTAGTTTTAA+TGG - chr8_4:36013684-36013703 Msa1324920:intron 30.0%
AGAAAGAGTCAGAAAAATGT+TGG - chr8_4:36013738-36013757 Msa1324920:intron 30.0%
GAAAGAGTCAGAAAAATGTT+GGG - chr8_4:36013739-36013758 Msa1324920:intron 30.0%
!! AAAACTTGTTGAAATCACTG+AGG + chr8_4:36013770-36013789 None:intergenic 30.0%
!! GATTTCAACAAGTTTTGTCT+TGG - chr8_4:36013774-36013793 Msa1324920:intron 30.0%
TCCCAGACGAAATATTATTA+TGG + chr8_4:36013855-36013874 None:intergenic 30.0%
TTATGAATGACCACAAAACA+AGG + chr8_4:36013883-36013902 None:intergenic 30.0%
!! TTGTTTTGTGGTCATTCATA+AGG - chr8_4:36013882-36013901 Msa1324920:intron 30.0%
AAATTATCCATTAACCTGAC+TGG + chr8_4:36013973-36013992 None:intergenic 30.0%
! TTTATATCCCCTTTTATGCA+TGG - chr8_4:36014068-36014087 Msa1324920:intron 30.0%
TATGAAGATGTTCTATGCAA+GGG + chr8_4:36014495-36014514 None:intergenic 30.0%
ATATGAAGATGTTCTATGCA+AGG + chr8_4:36014496-36014515 None:intergenic 30.0%
AACTTAGCCCAATTTAATAC+TGG - chr8_4:36014762-36014781 Msa1324920:intron 30.0%
ATAATCGAATCCAGAATCAA+TGG - chr8_4:36014796-36014815 Msa1324920:intron 30.0%
CAACAACTATACCATCATAA+TGG - chr8_4:36014879-36014898 Msa1324920:intron 30.0%
AAAAATCAACCCGTAAACAT+CGG - chr8_4:36015057-36015076 Msa1324920:intron 30.0%
AAAGTTGTTCAATACAGTTC+AGG - chr8_4:36015120-36015139 Msa1324920:intron 30.0%
AATTTAAATTTAGCCCCAGA+AGG + chr8_4:36015266-36015285 None:intergenic 30.0%
!!! AAAGATCCTTCATTTTGGTT+GGG + chr8_4:36015298-36015317 None:intergenic 30.0%
! TGAAGAAAGATCCTTCATTT+TGG + chr8_4:36015303-36015322 None:intergenic 30.0%
!! TTTCTTCAGGTTGATACTAT+AGG - chr8_4:36015353-36015372 Msa1324920:intron 30.0%
!! TTCTTCAGGTTGATACTATA+GGG - chr8_4:36015354-36015373 Msa1324920:intron 30.0%
GAGAACAGATACTAAAACAA+GGG + chr8_4:36016029-36016048 None:intergenic 30.0%
! AATTGGGAAATCGTTCATTT+TGG - chr8_4:36016098-36016117 Msa1324920:intron 30.0%
TATTCATGCAATACTTTGTG+AGG + chr8_4:36016153-36016172 None:intergenic 30.0%
TAGTAATAGTCATGTGAACT+CGG - chr8_4:36016387-36016406 Msa1324920:intron 30.0%
GAGATTTCTTCTGATGATAA+TGG - chr8_4:36016434-36016453 Msa1324920:intron 30.0%
!! ATTTTGTAGCAGTCTAAAAC+TGG - chr8_4:36016514-36016533 Msa1324920:intron 30.0%
!!! TTTATTTTATTTACGACGGG+GGG - chr8_4:36016666-36016685 Msa1324920:intron 30.0%
CCTTGTATACATAACTGAAA+GGG + chr8_4:36016782-36016801 None:intergenic 30.0%
ACCTTGTATACATAACTGAA+AGG + chr8_4:36016783-36016802 None:intergenic 30.0%
!! AAATCTAATGATGATGATGG+TGG - chr8_4:36016823-36016842 Msa1324920:five_prime_UTR 30.0%
!! AATCTAATGATGATGATGGT+GGG - chr8_4:36016824-36016843 Msa1324920:five_prime_UTR 30.0%
TTAACTAGTTCCTATTCCTA+TGG + chr8_4:36016910-36016929 None:intergenic 30.0%
! TTCTGTTACCCTTTTATGGA+TGG - chr8_4:36010603-36010622 Msa1324920:three_prime_UTR 35.0%
AAACACGTCCATCCATAAAA+GGG + chr8_4:36010614-36010633 None:intergenic 35.0%
TAAACACGTCCATCCATAAA+AGG + chr8_4:36010615-36010634 None:intergenic 35.0%
GCATCACAATATGCATTCTT+TGG - chr8_4:36011396-36011415 Msa1324920:CDS 35.0%
! GTTTTTCCACAATGAAGAAG+AGG - chr8_4:36011503-36011522 Msa1324920:CDS 35.0%
AAACAACCTCTTCTTCATTG+TGG + chr8_4:36011512-36011531 None:intergenic 35.0%
GATCAATCAAGGATAACAGT+TGG + chr8_4:36011760-36011779 None:intergenic 35.0%
ATGTTGAGGATTTACATCGA+TGG + chr8_4:36011899-36011918 None:intergenic 35.0%
TATCCATACCTTCGAAAAAG+TGG + chr8_4:36012122-36012141 None:intergenic 35.0%
AAATAAGGTACAGTTAGTGG+AGG - chr8_4:36012308-36012327 Msa1324920:CDS 35.0%
CCAAATTTACTAACCAACTC+CGG - chr8_4:36012568-36012587 Msa1324920:CDS 35.0%
!! TAAAATTACTTTGGGGCTTG+AGG - chr8_4:36013105-36013124 Msa1324920:CDS 35.0%
TTTGGGTCTTCAAAATCAAG+GGG - chr8_4:36013418-36013437 Msa1324920:intron 35.0%
CTTCAAAATCAAGGGGAAAT+TGG - chr8_4:36013425-36013444 Msa1324920:intron 35.0%
CACTTGTAAAGATACGTGTT+TGG + chr8_4:36013641-36013660 None:intergenic 35.0%
CAAACACGTATCTTTACAAG+TGG - chr8_4:36013639-36013658 Msa1324920:intron 35.0%
TTTACAAGTGGAAAGCCTTT+GGG - chr8_4:36013651-36013670 Msa1324920:intron 35.0%
!! AATGGTTTTACAAGTGGAGA+AGG - chr8_4:36013702-36013721 Msa1324920:intron 35.0%
AACCACGATAATATGGTAGA+AGG - chr8_4:36013810-36013829 Msa1324920:intron 35.0%
ACCACGATAATATGGTAGAA+GGG - chr8_4:36013811-36013830 Msa1324920:intron 35.0%
ATATACACCAGTCAGGTTAA+TGG - chr8_4:36013963-36013982 Msa1324920:intron 35.0%
!!! AACATTTTGGAGTTTCGACT+TGG - chr8_4:36014000-36014019 Msa1324920:intron 35.0%
CAAGATTCCATGCATAAAAG+GGG + chr8_4:36014078-36014097 None:intergenic 35.0%
GCAAGATTCCATGCATAAAA+GGG + chr8_4:36014079-36014098 None:intergenic 35.0%
AGCAAGATTCCATGCATAAA+AGG + chr8_4:36014080-36014099 None:intergenic 35.0%
ATATGAGCAACAGAAGAATG+TGG + chr8_4:36014273-36014292 None:intergenic 35.0%
TAGGAAGATGTTCTGTACAA+GGG + chr8_4:36014309-36014328 None:intergenic 35.0%
ATAGGAAGATGTTCTGTACA+AGG + chr8_4:36014310-36014329 None:intergenic 35.0%
AACTGTTGATCAAACCAGTT+AGG + chr8_4:36014390-36014409 None:intergenic 35.0%
TCTTCTCCAAATTACAGTAC+AGG - chr8_4:36014618-36014637 Msa1324920:intron 35.0%
AGTTGAACATTCCTTATGCT+GGG - chr8_4:36014643-36014662 Msa1324920:intron 35.0%
TCTGGATTCGATTATTGAGA+GGG + chr8_4:36014791-36014810 None:intergenic 35.0%
TTCTGGATTCGATTATTGAG+AGG + chr8_4:36014792-36014811 None:intergenic 35.0%
!! TTTGGTTGATCCATTGATTC+TGG + chr8_4:36014809-36014828 None:intergenic 35.0%
AATCAATGGATCAACCAAAC+AGG - chr8_4:36014810-36014829 Msa1324920:intron 35.0%
ATCAATGGATCAACCAAACA+GGG - chr8_4:36014811-36014830 Msa1324920:intron 35.0%
GCTGCAACATATTATTCAGA+AGG + chr8_4:36014860-36014879 None:intergenic 35.0%
TTGTCTATTCTCTCTAACGA+TGG + chr8_4:36015039-36015058 None:intergenic 35.0%
AAAATCAACCCGTAAACATC+GGG - chr8_4:36015058-36015077 Msa1324920:intron 35.0%
!! TTGAACAACTTTCGCTTTTC+TGG + chr8_4:36015112-36015131 None:intergenic 35.0%
!!! GTTTTTTTGCAAGAGAAGCT+TGG + chr8_4:36015244-36015263 None:intergenic 35.0%
TCTCTTGCAAAAAAACCTTC+TGG - chr8_4:36015248-36015267 Msa1324920:intron 35.0%
CTCTTGCAAAAAAACCTTCT+GGG - chr8_4:36015249-36015268 Msa1324920:intron 35.0%
TCTTGCAAAAAAACCTTCTG+GGG - chr8_4:36015250-36015269 Msa1324920:intron 35.0%
! ATTTTGCCCAACCAAAATGA+AGG - chr8_4:36015289-36015308 Msa1324920:intron 35.0%
!! GAAAGATCCTTCATTTTGGT+TGG + chr8_4:36015299-36015318 None:intergenic 35.0%
GATCAATATCATCTACATCG+AGG + chr8_4:36015544-36015563 None:intergenic 35.0%
CTTGTAGAAGATTGCACTTA+AGG + chr8_4:36015571-36015590 None:intergenic 35.0%
AAGTGCAATCTTCTACAAGA+TGG - chr8_4:36015572-36015591 Msa1324920:intron 35.0%
GAACTCAATTCACAAGAAGA+AGG - chr8_4:36015597-36015616 Msa1324920:intron 35.0%
! AAGAAGAAGGAATGTCCTTT+TGG - chr8_4:36015610-36015629 Msa1324920:intron 35.0%
CGAGAACAGATACTAAAACA+AGG + chr8_4:36016030-36016049 None:intergenic 35.0%
TTGAGAACCAGTTAGAAGTT+CGG + chr8_4:36016062-36016081 None:intergenic 35.0%
AGCTGCTTCGAACAAAAAAT+TGG - chr8_4:36016081-36016100 Msa1324920:intron 35.0%
GCTGCTTCGAACAAAAAATT+GGG - chr8_4:36016082-36016101 Msa1324920:intron 35.0%
TATACAAGGGGAACAAAATG+TGG - chr8_4:36016201-36016220 Msa1324920:intron 35.0%
TGCTGCTAAAGTAGTTAGTA+AGG - chr8_4:36016240-36016259 Msa1324920:intron 35.0%
CTAGTAATAACTTTCTCTGC+CGG + chr8_4:36016312-36016331 None:intergenic 35.0%
AATGTACTTGAACAGATGCA+AGG + chr8_4:36016497-36016516 None:intergenic 35.0%
ATGATTCCATGAGAATGTGT+TGG - chr8_4:36016570-36016589 Msa1324920:intron 35.0%
TAACTGAAAGGGAACATCAT+GGG + chr8_4:36016771-36016790 None:intergenic 35.0%
ATAACTGAAAGGGAACATCA+TGG + chr8_4:36016772-36016791 None:intergenic 35.0%
CCCTTTCAGTTATGTATACA+AGG - chr8_4:36016779-36016798 Msa1324920:CDS 35.0%
GTTATGTATACAAGGTGTGA+AGG - chr8_4:36016787-36016806 Msa1324920:CDS 35.0%
GAAGACATGTCTATGAGTTT+GGG + chr8_4:36016971-36016990 None:intergenic 35.0%
AGAAGACATGTCTATGAGTT+TGG + chr8_4:36016972-36016991 None:intergenic 35.0%
CACAGACATTGGATATGACA+CGG + chr8_4:36011192-36011211 None:intergenic 40.0%
TAGGTACAACCTATGAAGCA+CGG + chr8_4:36011222-36011241 None:intergenic 40.0%
GTTTCGTCAAAAGCAACAGT+TGG + chr8_4:36011704-36011723 None:intergenic 40.0%
! TTGACTTGACCATCAAAGCA+GGG + chr8_4:36011947-36011966 None:intergenic 40.0%
! GTACTTTTCCACATTGCAGA+CGG - chr8_4:36012057-36012076 Msa1324920:CDS 40.0%
!!! TCTCACAACCACTTTTTCGA+AGG - chr8_4:36012111-36012130 Msa1324920:CDS 40.0%
!!! CAACCACTTTTTCGAAGGTA+TGG - chr8_4:36012116-36012135 Msa1324920:CDS 40.0%
! CCGGAGTTGGTTAGTAAATT+TGG + chr8_4:36012571-36012590 None:intergenic 40.0%
! CCAAAAAGTGCAGGAGTTAT+CGG - chr8_4:36012976-36012995 Msa1324920:CDS 40.0%
! CTTTTTCTCTCCCCTCTATA+CGG - chr8_4:36013328-36013347 Msa1324920:intron 40.0%
! TTTTTCTCTCCCCTCTATAC+GGG - chr8_4:36013329-36013348 Msa1324920:intron 40.0%
AATAGGGAGAAAACCAAGTG+TGG + chr8_4:36013364-36013383 None:intergenic 40.0%
CACACTCTGCATTCTGAATA+GGG + chr8_4:36013380-36013399 None:intergenic 40.0%
TCACACTCTGCATTCTGAAT+AGG + chr8_4:36013381-36013400 None:intergenic 40.0%
CTTTACAAGTGGAAAGCCTT+TGG - chr8_4:36013650-36013669 Msa1324920:intron 40.0%
CCACGATAATATGGTAGAAG+GGG - chr8_4:36013812-36013831 Msa1324920:intron 40.0%
CACGATAATATGGTAGAAGG+GGG - chr8_4:36013813-36013832 Msa1324920:intron 40.0%
!!! TGGGAAATTGCCTTGTTTTG+TGG - chr8_4:36013870-36013889 Msa1324920:intron 40.0%
TGGTCATTCATAAGGTCTGT+AGG - chr8_4:36013890-36013909 Msa1324920:intron 40.0%
GACATAGATATACACCAGTC+AGG - chr8_4:36013956-36013975 Msa1324920:intron 40.0%
AACAGAAGAATGTGGATGTG+AGG + chr8_4:36014265-36014284 None:intergenic 40.0%
TGATCAAACCAGTTAGGAAC+AGG + chr8_4:36014384-36014403 None:intergenic 40.0%
ATGTGTGAAATGGAGGAATG+TGG + chr8_4:36014459-36014478 None:intergenic 40.0%
TCCTCCATTTCACACATAGA+AGG - chr8_4:36014462-36014481 Msa1324920:CDS 40.0%
TCCTTCTATGTGTGAAATGG+AGG + chr8_4:36014466-36014485 None:intergenic 40.0%
!! GAAGACTTTGGTGCCAAAAT+TGG + chr8_4:36014558-36014577 None:intergenic 40.0%
! AACTGGCCTGTACTGTAATT+TGG + chr8_4:36014627-36014646 None:intergenic 40.0%
CAGCATAAGGAATGTTCAAC+TGG + chr8_4:36014644-36014663 None:intergenic 40.0%
CAGTTGAACATTCCTTATGC+TGG - chr8_4:36014642-36014661 Msa1324920:intron 40.0%
GTTGAACATTCCTTATGCTG+GGG - chr8_4:36014644-36014663 Msa1324920:intron 40.0%
TTGAACATTCCTTATGCTGG+GGG - chr8_4:36014645-36014664 Msa1324920:intron 40.0%
ATTCAATTCTGCGTCACACT+TGG - chr8_4:36014707-36014726 Msa1324920:intron 40.0%
TTCAATTCTGCGTCACACTT+GGG - chr8_4:36014708-36014727 Msa1324920:intron 40.0%
AGGGGAGCCAGTATTAAATT+GGG + chr8_4:36014772-36014791 None:intergenic 40.0%
CTGGATTCGATTATTGAGAG+GGG + chr8_4:36014790-36014809 None:intergenic 40.0%
AACCAAACAGGGTTGTATCT+TGG - chr8_4:36014822-36014841 Msa1324920:intron 40.0%
GAGACACTGATCCATTATGA+TGG + chr8_4:36014893-36014912 None:intergenic 40.0%
TTTAATCACCATCTTCCGTC+TGG - chr8_4:36015008-36015027 Msa1324920:intron 40.0%
!! TTCAGGTTGATACTATAGGG+AGG - chr8_4:36015357-36015376 Msa1324920:intron 40.0%
ACCATCCTCAATAGTGATTC+TGG + chr8_4:36015510-36015529 None:intergenic 40.0%
TGCAATCTTCTACAAGATGG+TGG - chr8_4:36015575-36015594 Msa1324920:intron 40.0%
! AGAAGGAATGTCCTTTTGGA+AGG - chr8_4:36015614-36015633 Msa1324920:intron 40.0%
ATGTTGCTAGTCCTTCCAAA+AGG + chr8_4:36015628-36015647 None:intergenic 40.0%
TTGTGTCCATTCTTTCCTAG+CGG + chr8_4:36015668-36015687 None:intergenic 40.0%
TAAGAAGACAAGGTCATCCT+TGG + chr8_4:36015705-36015724 None:intergenic 40.0%
ATGCTAGTCGTAAGAAGACA+AGG + chr8_4:36015715-36015734 None:intergenic 40.0%
ACGACTAGCATCTATTTCCA+AGG - chr8_4:36015724-36015743 Msa1324920:intron 40.0%
CGACTAGCATCTATTTCCAA+GGG - chr8_4:36015725-36015744 Msa1324920:intron 40.0%
TAGCATCTATTTCCAAGGGA+CGG - chr8_4:36015729-36015748 Msa1324920:intron 40.0%
AACAACCATAGCAAGATCAC+TGG + chr8_4:36015888-36015907 None:intergenic 40.0%
GTTGTTTGTCAGTGTATCGA+AGG - chr8_4:36015902-36015921 Msa1324920:intron 40.0%
TTGTCAGTGTATCGAAGGAA+TGG - chr8_4:36015907-36015926 Msa1324920:intron 40.0%
TGTATCGAAGGAATGGATCT+TGG - chr8_4:36015914-36015933 Msa1324920:intron 40.0%
!! GGAAATCGTTCATTTTGGCA+GGG - chr8_4:36016103-36016122 Msa1324920:intron 40.0%
! ATGCAGTCACTGGTTATACA+AGG - chr8_4:36016187-36016206 Msa1324920:intron 40.0%
! TGCAGTCACTGGTTATACAA+GGG - chr8_4:36016188-36016207 Msa1324920:intron 40.0%
CTGGATTTAACAGCTATGCT+GGG - chr8_4:36016359-36016378 Msa1324920:intron 40.0%
GAAAATGCAAGTTGCATCTG+TGG - chr8_4:36016536-36016555 Msa1324920:intron 40.0%
CAAATGCCAACACATTCTCA+TGG + chr8_4:36016579-36016598 None:intergenic 40.0%
TGTGTCTACGAAAAGTCTCA+TGG + chr8_4:36016708-36016727 None:intergenic 40.0%
! ACTTTTCGTAGACACACTAG+TGG - chr8_4:36016712-36016731 Msa1324920:intron 40.0%
TGGTTAGCATGTACAGGTTT+AGG - chr8_4:36016732-36016751 Msa1324920:intron 40.0%
TGTATACAAGGTGTGAAGGT+TGG - chr8_4:36016791-36016810 Msa1324920:CDS 40.0%
GTATACAAGGTGTGAAGGTT+GGG - chr8_4:36016792-36016811 Msa1324920:CDS 40.0%
GGCTGAAATACCATAGGAAT+AGG - chr8_4:36016897-36016916 Msa1324920:intron 40.0%
TAGTAAAAGCCGTGTCTGTC+TGG - chr8_4:36011074-36011093 Msa1324920:CDS 45.0%
TAATCACATGTCTCAGCGTC+GGG + chr8_4:36011119-36011138 None:intergenic 45.0%
GTAATCACATGTCTCAGCGT+CGG + chr8_4:36011120-36011139 None:intergenic 45.0%
ACGGATACGAACACAGACAT+TGG + chr8_4:36011203-36011222 None:intergenic 45.0%
TGTTCGTATCCGTGCTTCAT+AGG - chr8_4:36011210-36011229 Msa1324920:CDS 45.0%
CTTTGGTAAAGATGTTGCCG+AGG - chr8_4:36011413-36011432 Msa1324920:CDS 45.0%
CCTCGTTGAACGTAACAGAA+GGG + chr8_4:36011479-36011498 None:intergenic 45.0%
TCCTCGTTGAACGTAACAGA+AGG + chr8_4:36011480-36011499 None:intergenic 45.0%
TTCTGTTACGTTCAACGAGG+AGG - chr8_4:36011479-36011498 Msa1324920:CDS 45.0%
!! CAGTTGGAGCATTGATGCTT+TGG + chr8_4:36011744-36011763 None:intergenic 45.0%
! GAACGTTTTCCCTGCTTTGA+TGG - chr8_4:36011935-36011954 Msa1324920:CDS 45.0%
!! GTTGACTTGACCATCAAAGC+AGG + chr8_4:36011948-36011967 None:intergenic 45.0%
TGTCCTTTAGGCAGAACAGA+GGG + chr8_4:36011979-36011998 None:intergenic 45.0%
TTGTCCTTTAGGCAGAACAG+AGG + chr8_4:36011980-36011999 None:intergenic 45.0%
TACATCATCCGTCTGCAATG+TGG + chr8_4:36012068-36012087 None:intergenic 45.0%
CATTGCAGACGGATGATGTA+AGG - chr8_4:36012068-36012087 Msa1324920:CDS 45.0%
! AGTTATTGGCCTGCTTCTAC+AGG + chr8_4:36012464-36012483 None:intergenic 45.0%
! TTCTGGCTGCTTGATGTTTC+CGG + chr8_4:36012590-36012609 None:intergenic 45.0%
! GTTAGTGGACCAAAAAGTGC+AGG - chr8_4:36012967-36012986 Msa1324920:CDS 45.0%
! CCGATAACTCCTGCACTTTT+TGG + chr8_4:36012979-36012998 None:intergenic 45.0%
! TTTAGGGTGAGTGCTGCAAA+TGG + chr8_4:36013286-36013305 None:intergenic 45.0%
CGTATAGAGGGGAGAGAAAA+AGG + chr8_4:36013330-36013349 None:intergenic 45.0%
CCCCTTCTACCATATTATCG+TGG + chr8_4:36013815-36013834 None:intergenic 45.0%
CAGATTCCTCTGCTTCTGAA+TGG - chr8_4:36014178-36014197 Msa1324920:intron 45.0%
TGCTTCTGAATGGTCACAGA+GGG - chr8_4:36014188-36014207 Msa1324920:intron 45.0%
CTAGTGAACCTGTTCCTAAC+TGG - chr8_4:36014373-36014392 Msa1324920:intron 45.0%
!! CTGTTGATGATGACAGGAGA+TGG - chr8_4:36014424-36014443 Msa1324920:CDS 45.0%
CGGTCCTTCTATGTGTGAAA+TGG + chr8_4:36014469-36014488 None:intergenic 45.0%
! GATGTTCTATGCAAGGGCAT+CGG + chr8_4:36014489-36014508 None:intergenic 45.0%
! TGAAGCTCTTGTTGCTTGTC+AGG + chr8_4:36014519-36014538 None:intergenic 45.0%
TTTACTTCTTATCCTCCCCC+TGG - chr8_4:36014579-36014598 Msa1324920:intron 45.0%
TTACTTCTTATCCTCCCCCT+GGG - chr8_4:36014580-36014599 Msa1324920:intron 45.0%
! CCAAGATGCGGCTCATATTT+TGG + chr8_4:36014738-36014757 None:intergenic 45.0%
CCAAAATATGAGCCGCATCT+TGG - chr8_4:36014735-36014754 Msa1324920:intron 45.0%
AAATATGAGCCGCATCTTGG+TGG - chr8_4:36014738-36014757 Msa1324920:intron 45.0%
GCTAAGTTTCCACCAAGATG+CGG + chr8_4:36014750-36014769 None:intergenic 45.0%
GAGGGGAGCCAGTATTAAAT+TGG + chr8_4:36014773-36014792 None:intergenic 45.0%
CTCCAAGATACAACCCTGTT+TGG + chr8_4:36014827-36014846 None:intergenic 45.0%
CTAACGATGGATGATCCAGA+CGG + chr8_4:36015026-36015045 None:intergenic 45.0%
TTGAGAGACCCGATGTTTAC+GGG + chr8_4:36015069-36015088 None:intergenic 45.0%
GTTGAGAGACCCGATGTTTA+CGG + chr8_4:36015070-36015089 None:intergenic 45.0%
TAAACATCGGGTCTCTCAAC+AGG - chr8_4:36015070-36015089 Msa1324920:intron 45.0%
AAACATCGGGTCTCTCAACA+GGG - chr8_4:36015071-36015090 Msa1324920:intron 45.0%
!!! ACTTTCGCTTTTCTGGCTAC+TGG + chr8_4:36015105-36015124 None:intergenic 45.0%
AAACCTGTGTGGCTCAGTAT+TGG + chr8_4:36015336-36015355 None:intergenic 45.0%
TCAACCTGAAGAAACCTGTG+TGG + chr8_4:36015347-36015366 None:intergenic 45.0%
GAGGATCAGCTTCAAGAAGA+GGG + chr8_4:36015412-36015431 None:intergenic 45.0%
GCCAGAATCACTATTGAGGA+TGG - chr8_4:36015506-36015525 Msa1324920:intron 45.0%
AGCAACATCACTTCATCTCG+TGG - chr8_4:36015640-36015659 Msa1324920:intron 45.0%
TGTGTCCATTCTTTCCTAGC+GGG + chr8_4:36015667-36015686 None:intergenic 45.0%
GGAAAGAATGGACACAAAGC+TGG - chr8_4:36015671-36015690 Msa1324920:intron 45.0%
! AGCTCCTAGCGAAGTATCTT+CGG - chr8_4:36015753-36015772 Msa1324920:intron 45.0%
TATCTTCGGTTGCTTGATCC+TGG - chr8_4:36015767-36015786 Msa1324920:intron 45.0%
! GGAATGGATCTTGGTTCTCT+TGG - chr8_4:36015923-36015942 Msa1324920:CDS 45.0%
ACCAGTTAGAAGTTCGGTAG+CGG + chr8_4:36016056-36016075 None:intergenic 45.0%
!! GGGAAATCGTTCATTTTGGC+AGG - chr8_4:36016102-36016121 Msa1324920:intron 45.0%
! GCAGTCACTGGTTATACAAG+GGG - chr8_4:36016189-36016208 Msa1324920:intron 45.0%
GAACAAAATGTGGCTGCGAT+TGG - chr8_4:36016211-36016230 Msa1324920:intron 45.0%
TAGCTGTTAAATCCAGCCAC+AGG + chr8_4:36016355-36016374 None:intergenic 45.0%
GCTGGATTTAACAGCTATGC+TGG - chr8_4:36016358-36016377 Msa1324920:intron 45.0%
AATGCAAGTTGCATCTGTGG+CGG - chr8_4:36016539-36016558 Msa1324920:intron 45.0%
CACTAGTGGTTAGCATGTAC+AGG - chr8_4:36016726-36016745 Msa1324920:intron 45.0%
ACACATGTTGACCAGTTTGG+TGG - chr8_4:36016874-36016893 Msa1324920:five_prime_UTR 45.0%
CACATGTTGACCAGTTTGGT+GGG - chr8_4:36016875-36016894 Msa1324920:five_prime_UTR 45.0%
! ACATGTTGACCAGTTTGGTG+GGG - chr8_4:36016876-36016895 Msa1324920:five_prime_UTR 45.0%
!! TATTAAAAAATAAAATAGAT+AGG - chr8_4:36012281-36012300 Msa1324920:CDS 5.0%
AGTACGACACCAGACAGACA+CGG + chr8_4:36011086-36011105 None:intergenic 50.0%
TGTTGCCGAGGAAGTTGAGT+TGG - chr8_4:36011425-36011444 Msa1324920:CDS 50.0%
GTTGCCGAGGAAGTTGAGTT+GGG - chr8_4:36011426-36011445 Msa1324920:CDS 50.0%
! TTGCCGAGGAAGTTGAGTTG+GGG - chr8_4:36011427-36011446 Msa1324920:CDS 50.0%
CCCTTCTGTTACGTTCAACG+AGG - chr8_4:36011476-36011495 Msa1324920:CDS 50.0%
CTTCCCTCTGTTCTGCCTAA+AGG - chr8_4:36011973-36011992 Msa1324920:CDS 50.0%
TCTGTGTTGCCTGTAGAAGC+AGG - chr8_4:36012452-36012471 Msa1324920:CDS 50.0%
CTGCTTGATGTTTCCGGAGT+TGG + chr8_4:36012584-36012603 None:intergenic 50.0%
GTGCAGGAGTTATCGGTGAT+CGG - chr8_4:36012983-36013002 Msa1324920:CDS 50.0%
TGCAGGAGTTATCGGTGATC+GGG - chr8_4:36012984-36013003 Msa1324920:CDS 50.0%
! TTTGGGGCTTGAGGTGCTTA+GGG - chr8_4:36013114-36013133 Msa1324920:CDS 50.0%
TAGGTGTGTCCCGTATAGAG+GGG + chr8_4:36013341-36013360 None:intergenic 50.0%
GTAGGTGTGTCCCGTATAGA+GGG + chr8_4:36013342-36013361 None:intergenic 50.0%
GGGAGAAAACCAAGTGTGGT+AGG + chr8_4:36013360-36013379 None:intergenic 50.0%
ACAAGTGGAAAGCCTTTGGG+TGG - chr8_4:36013654-36013673 Msa1324920:intron 50.0%
CAAGTGGAAAGCCTTTGGGT+GGG - chr8_4:36013655-36013674 Msa1324920:intron 50.0%
CTGTGACCATTCAGAAGCAG+AGG + chr8_4:36014187-36014206 None:intergenic 50.0%
CTGCTTCTGAATGGTCACAG+AGG - chr8_4:36014187-36014206 Msa1324920:intron 50.0%
AGAGGGATGATGTTCCCTAC+TGG - chr8_4:36014205-36014224 Msa1324920:intron 50.0%
GAGGGATGATGTTCCCTACT+GGG - chr8_4:36014206-36014225 Msa1324920:intron 50.0%
GAACCTTCGTCAACCCAGTA+GGG + chr8_4:36014222-36014241 None:intergenic 50.0%
AGAACCTTCGTCAACCCAGT+AGG + chr8_4:36014223-36014242 None:intergenic 50.0%
GTTGACGAAGGTTCTCAGGA+TGG - chr8_4:36014228-36014247 Msa1324920:intron 50.0%
GTTCTCAGGATGGCAAACGA+TGG - chr8_4:36014238-36014257 Msa1324920:intron 50.0%
CTTCCTATCCTGAGCAGCAA+CGG - chr8_4:36014322-36014341 Msa1324920:intron 50.0%
CACTAGAGCGATGTTGGAGT+TGG + chr8_4:36014359-36014378 None:intergenic 50.0%
CAGGTTCACTAGAGCGATGT+TGG + chr8_4:36014365-36014384 None:intergenic 50.0%
TACTTCTTATCCTCCCCCTG+GGG - chr8_4:36014581-36014600 Msa1324920:intron 50.0%
ATTGTTGAGACCTACCCCCA+GGG + chr8_4:36014599-36014618 None:intergenic 50.0%
AATTCTGCGTCACACTTGGG+TGG - chr8_4:36014711-36014730 Msa1324920:intron 50.0%
TGCAACTGAGGCAGTAAGTG+AGG + chr8_4:36014915-36014934 None:intergenic 50.0%
TATCCTGTTCAAGCGTCAGC+TGG - chr8_4:36014957-36014976 Msa1324920:intron 50.0%
TGGATGATCCAGACGGAAGA+TGG + chr8_4:36015019-36015038 None:intergenic 50.0%
!! TGTGTGGCTCAGTATTGGCA+CGG + chr8_4:36015331-36015350 None:intergenic 50.0%
TGAGCCACACAGGTTTCTTC+AGG - chr8_4:36015340-36015359 Msa1324920:CDS 50.0%
GGAGGATCAGCTTCAAGAAG+AGG + chr8_4:36015413-36015432 None:intergenic 50.0%
TTCAGAGAAGTCCCTTGAGC+AGG - chr8_4:36015469-36015488 Msa1324920:intron 50.0%
GAACAATGGCTCCTGCTCAA+GGG + chr8_4:36015483-36015502 None:intergenic 50.0%
! GTGATTCTGGCTGCGAACAA+TGG + chr8_4:36015497-36015516 None:intergenic 50.0%
CGCAGCCAGAATCACTATTG+AGG - chr8_4:36015502-36015521 Msa1324920:intron 50.0%
!! CAAAGCTGGTCTTACTGCCA+AGG - chr8_4:36015685-36015704 Msa1324920:intron 50.0%
GCAACCGAAGATACTTCGCT+AGG + chr8_4:36015760-36015779 None:intergenic 50.0%
! ATCCTGGTAGTGAGCTTGTG+CGG - chr8_4:36015783-36015802 Msa1324920:intron 50.0%
TCTGCTGCTGCTGAATCAGA+GGG + chr8_4:36015860-36015879 None:intergenic 50.0%
GACTGCCAGTGATCTTGCTA+TGG - chr8_4:36015880-36015899 Msa1324920:intron 50.0%
ACCGCTACCGAACTTCTAAC+TGG - chr8_4:36016052-36016071 Msa1324920:intron 50.0%
CCAGTGACTGCATGATACTC+TGG + chr8_4:36016180-36016199 None:intergenic 50.0%
! CCAGAGTATCATGCAGTCAC+TGG - chr8_4:36016177-36016196 Msa1324920:intron 50.0%
TAACTTTCTCTGCCGGTCGT+TGG + chr8_4:36016305-36016324 None:intergenic 50.0%
GGGACACATGTTGACCAGTT+TGG - chr8_4:36016871-36016890 Msa1324920:five_prime_UTR 50.0%
GTATTTCAGCCCCACCAAAC+TGG + chr8_4:36016888-36016907 None:intergenic 50.0%
TGGTGGGGCTGAAATACCAT+AGG - chr8_4:36016891-36016910 Msa1324920:intron 50.0%
!! TGCCGAGGAAGTTGAGTTGG+GGG - chr8_4:36011428-36011447 Msa1324920:CDS 55.0%
!! CTTTGGGGCTTGAGGTGCTT+AGG - chr8_4:36013113-36013132 Msa1324920:CDS 55.0%
GGTAGGTGTGTCCCGTATAG+AGG + chr8_4:36013343-36013362 None:intergenic 55.0%
! GTTCCCTACTGGGTTGACGA+AGG - chr8_4:36014216-36014235 Msa1324920:intron 55.0%
! CTGGGTTGACGAAGGTTCTC+AGG - chr8_4:36014224-36014243 Msa1324920:intron 55.0%
ACTTCTTATCCTCCCCCTGG+GGG - chr8_4:36014582-36014601 Msa1324920:intron 55.0%
TTGTTGAGACCTACCCCCAG+GGG + chr8_4:36014598-36014617 None:intergenic 55.0%
GATTGTTGAGACCTACCCCC+AGG + chr8_4:36014600-36014619 None:intergenic 55.0%
ATGTGAGCTCCCCCAGCATA+AGG + chr8_4:36014657-36014676 None:intergenic 55.0%
TTATGCTGGGGGAGCTCACA+TGG - chr8_4:36014656-36014675 Msa1324920:intron 55.0%
TGCTGCTGTTGCTGCAACTG+AGG + chr8_4:36014927-36014946 None:intergenic 55.0%
AAGCCAGCTGACGCTTGAAC+AGG + chr8_4:36014963-36014982 None:intergenic 55.0%
! GCGTCAGCTGGCTTAATGTC+AGG - chr8_4:36014969-36014988 Msa1324920:intron 55.0%
!! GTGTGGCTCAGTATTGGCAC+GGG + chr8_4:36015330-36015349 None:intergenic 55.0%
GTGCCAATACTGAGCCACAC+AGG - chr8_4:36015330-36015349 Msa1324920:CDS 55.0%
TCAGCTTCAAGAAGAGGGCG+AGG + chr8_4:36015407-36015426 None:intergenic 55.0%
AATTCGCTCAGAGCCACCAC+TGG + chr8_4:36015447-36015466 None:intergenic 55.0%
CGAACAATGGCTCCTGCTCA+AGG + chr8_4:36015484-36015503 None:intergenic 55.0%
GTGGACCCGCTAGGAAAGAA+TGG - chr8_4:36015659-36015678 Msa1324920:intron 55.0%
ATCCGCACAAGCTCACTACC+AGG + chr8_4:36015788-36015807 None:intergenic 55.0%
! GCTTGTGCGGATTGTCTGCA+TGG - chr8_4:36015796-36015815 Msa1324920:intron 55.0%
CTGCTGCTGCTGAATCAGAG+GGG + chr8_4:36015859-36015878 None:intergenic 55.0%
CTCTGCTGCTGCTGAATCAG+AGG + chr8_4:36015861-36015880 None:intergenic 55.0%
TGGTGCTTGTCTTGCAGCAG+TGG - chr8_4:36015943-36015962 Msa1324920:CDS 55.0%
ATCTCCAGCAGGACTTCCGA+GGG + chr8_4:36015999-36016018 None:intergenic 55.0%
CTTGCACGCAAGAGCTCAAC+AGG + chr8_4:36016271-36016290 None:intergenic 55.0%
GTCTTCCTCACACCAACGAC+CGG - chr8_4:36016290-36016309 Msa1324920:intron 55.0%
!! GCCGAGGAAGTTGAGTTGGG+GGG - chr8_4:36011429-36011448 Msa1324920:CDS 60.0%
CCCCCCCAACTCAACTTCCT+CGG + chr8_4:36011433-36011452 None:intergenic 60.0%
!! CCGAGGAAGTTGAGTTGGGG+GGG - chr8_4:36011430-36011449 Msa1324920:CDS 60.0%
! GGGCTTGAGGTGCTTAGGGT+GGG - chr8_4:36013118-36013137 Msa1324920:CDS 60.0%
CGGGACACACCTACCACACT+TGG - chr8_4:36013348-36013367 Msa1324920:intron 60.0%
AGCTTGCAGCACCCACCCAA+AGG + chr8_4:36013669-36013688 None:intergenic 60.0%
CTGCCGTTGCTGCTCAGGAT+AGG + chr8_4:36014328-36014347 None:intergenic 60.0%
TGTTGAGACCTACCCCCAGG+GGG + chr8_4:36014597-36014616 None:intergenic 60.0%
AGAGGGCGAGGCTGACGAAT+GGG + chr8_4:36015395-36015414 None:intergenic 60.0%
AAGAGGGCGAGGCTGACGAA+TGG + chr8_4:36015396-36015415 None:intergenic 60.0%
CCACTGGCAGAGGAGTTTGG+AGG + chr8_4:36015431-36015450 None:intergenic 60.0%
CCTCCAAACTCCTCTGCCAG+TGG - chr8_4:36015428-36015447 Msa1324920:intron 60.0%
CCACCACTGGCAGAGGAGTT+TGG + chr8_4:36015434-36015453 None:intergenic 60.0%
CCAAACTCCTCTGCCAGTGG+TGG - chr8_4:36015431-36015450 Msa1324920:intron 60.0%
CTTCATCTCGTGGACCCGCT+AGG - chr8_4:36015650-36015669 Msa1324920:intron 60.0%
TCTCCAGCAGGACTTCCGAG+GGG + chr8_4:36015998-36016017 None:intergenic 60.0%
CATCTCCAGCAGGACTTCCG+AGG + chr8_4:36016000-36016019 None:intergenic 60.0%
CTCGGAAGTCCTGCTGGAGA+TGG - chr8_4:36015998-36016017 Msa1324920:CDS 60.0%
!! AGGGAAGCACCATCTCCAGC+AGG + chr8_4:36016010-36016029 None:intergenic 60.0%
! TGGTGGGCAACTCTTGCCCT+AGG - chr8_4:36016840-36016859 Msa1324920:five_prime_UTR 60.0%
GGTGGGCAACTCTTGCCCTA+GGG - chr8_4:36016841-36016860 Msa1324920:five_prime_UTR 60.0%
GTGGGCAACTCTTGCCCTAG+GGG - chr8_4:36016842-36016861 Msa1324920:five_prime_UTR 60.0%
! TCTTGCCCTAGGGGTGCACT+GGG - chr8_4:36016851-36016870 Msa1324920:five_prime_UTR 60.0%
TGTGTCCCAGTGCACCCCTA+GGG + chr8_4:36016859-36016878 None:intergenic 60.0%
ATGTGTCCCAGTGCACCCCT+AGG + chr8_4:36016860-36016879 None:intergenic 60.0%
! GGGGCTTGAGGTGCTTAGGG+TGG - chr8_4:36013117-36013136 Msa1324920:CDS 65.0%
TGCAGCTGCCGTTGCTGCTC+AGG + chr8_4:36014333-36014352 None:intergenic 65.0%
CTTATCCTCCCCCTGGGGGT+AGG - chr8_4:36014586-36014605 Msa1324920:intron 65.0%
CTCAGAGCCACCACTGGCAG+AGG + chr8_4:36015441-36015460 None:intergenic 65.0%
CGCTAGGAGCTTCCGTCCCT+TGG + chr8_4:36015744-36015763 None:intergenic 65.0%
CTCCAGCAGGACTTCCGAGG+GGG + chr8_4:36015997-36016016 None:intergenic 65.0%
CTCTGCCGGTCGTTGGTGTG+AGG + chr8_4:36016298-36016317 None:intergenic 65.0%
! CTCTTGCCCTAGGGGTGCAC+TGG - chr8_4:36016850-36016869 Msa1324920:five_prime_UTR 65.0%
TGAGACCTACCCCCAGGGGG+AGG + chr8_4:36014594-36014613 None:intergenic 70.0%
GCGCAGAGGAGGAGGCTCTG+AGG + chr8_4:36015975-36015994 None:intergenic 70.0%
CGCTCAGCGCTCTTCGCCTG+TGG - chr8_4:36016336-36016355 Msa1324920:intron 70.0%
CAGCGCTCTTCGCCTGTGGC+TGG - chr8_4:36016340-36016359 Msa1324920:intron 70.0%
CCTCCTCCTCTGCGCCCCCT+CGG - chr8_4:36015980-36015999 Msa1324920:CDS 75.0%
! CTTCCGAGGGGGCGCAGAGG+AGG + chr8_4:36015986-36016005 None:intergenic 75.0%
! GGACTTCCGAGGGGGCGCAG+AGG + chr8_4:36015989-36016008 None:intergenic 75.0%
CGCCCCCTCGGAAGTCCTGC+TGG - chr8_4:36015992-36016011 Msa1324920:CDS 75.0%
!! CCGAGGGGGCGCAGAGGAGG+AGG + chr8_4:36015983-36016002 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 36010423 36017017 36010423 ID=Msa1324920;Name=Msa1324920
chr8_4 mRNA 36010423 36017017 36010423 ID=Msa1324920-mRNA-1;Parent=Msa1324920;Name=Msa1324920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=130|1|1|1|0.8|0.66|6|591|865
chr8_4 exon 36010423 36013259 36010423 ID=Msa1324920-mRNA-1:exon:11260;Parent=Msa1324920-mRNA-1
chr8_4 exon 36014422 36014485 36014422 ID=Msa1324920-mRNA-1:exon:11259;Parent=Msa1324920-mRNA-1
chr8_4 exon 36015308 36015364 36015308 ID=Msa1324920-mRNA-1:exon:11258;Parent=Msa1324920-mRNA-1
chr8_4 exon 36015916 36016061 36015916 ID=Msa1324920-mRNA-1:exon:11257;Parent=Msa1324920-mRNA-1
chr8_4 exon 36016734 36016896 36016734 ID=Msa1324920-mRNA-1:exon:11256;Parent=Msa1324920-mRNA-1
chr8_4 exon 36016966 36017017 36016966 ID=Msa1324920-mRNA-1:exon:11255;Parent=Msa1324920-mRNA-1
chr8_4 five_prime_UTR 36016966 36017017 36016966 ID=Msa1324920-mRNA-1:five_prime_utr;Parent=Msa1324920-mRNA-1
chr8_4 five_prime_UTR 36016819 36016896 36016819 ID=Msa1324920-mRNA-1:five_prime_utr;Parent=Msa1324920-mRNA-1
chr8_4 CDS 36016734 36016818 36016734 ID=Msa1324920-mRNA-1:cds;Parent=Msa1324920-mRNA-1
chr8_4 CDS 36015916 36016061 36015916 ID=Msa1324920-mRNA-1:cds;Parent=Msa1324920-mRNA-1
chr8_4 CDS 36015308 36015364 36015308 ID=Msa1324920-mRNA-1:cds;Parent=Msa1324920-mRNA-1
chr8_4 CDS 36014422 36014485 36014422 ID=Msa1324920-mRNA-1:cds;Parent=Msa1324920-mRNA-1
chr8_4 CDS 36011014 36013259 36011014 ID=Msa1324920-mRNA-1:cds;Parent=Msa1324920-mRNA-1
chr8_4 three_prime_UTR 36010423 36011013 36010423 ID=Msa1324920-mRNA-1:three_prime_utr;Parent=Msa1324920-mRNA-1
Gene Sequence

>Msa1324920

ATGGACGTGTTTAATGCTGCTGCTGTTGATTCTCTTGTTGCTTCCAACAACCAAGATCTTAATCTTTTGGGAAATCTTACTAAAGATGGTGCATTATTTGATGCATCACAATATGCATTCTTTGGTAAAGATGTTGCCGAGGAAGTTGAGTTGGGGGGGTTAGATGATGTAAATGATTATATCCCTTCTGTTACGTTCAACGAGGAGGAGTTTTTCCACAATGAAGAAGAGACGGATGATGTAAGGTCTCTTTCTGATATTGATGATCTCACAACCACTTTTTCGAAGTTGAACAAAATTGTTAGTGGACCAAAAAGTGCAGGAGTTATCGGTGATCGGGTGTCAAGAGAAAATTCCTCTGCTTCTGAATGGTCACAGAGGGATGATGTTCCCTACTGGGTTGACGAAGGTTCTCAGGATGGCAAACGATGGTCCTCACATCCACATTCTTCTGTTGCTCATATACAAGAATCAAAGCCCTTGTACAGAACATCTTCCTATCCTGAGCAGCAACGGCAGCTGCAACACCAACTCCAACATCGCTCTAGTGAACCTGTTCCTAACTGGTTTGATCAACAGTTGTATGATAGTGAAACTGTTGATGATGACAGGAGATGGTCGTCGCATCCACATTCCTCCATTTCACACATAGAAGGACCGATGCCCTTGCATAGAACATCTTCATATCCTGACAAGCAACAAGAGCTTCATCGTTTTTTGAGTGAACCAATTTTGGCACCAAAGTCTTCATTTACTTCTTATCCTCCCCCTGGGGGTAGGTCTCAACAATCTTCTCCAAATTACAGTACAGGCCAGTTGAACATTCCTTATGCTGGGGGAGCTCACATGGCATTGTCATCACAAAATCGCTCTCATCTATTCAATTCTGCGTCACACTTGGGTGGACCAAAATATGAGCCGCATCTTGGTGGAAACTTAGCCCAATTTAATACTGGCTCCCCTCTCAATAATCGAATCCAGAATCAATGGATCAACCAAACAGGGTTGTATCTTGGAGATAATTCAAACCTTCTGAATAATATGTTGCAGCAACAACTATACCATCATAATGGATCAGTGTCTCCTCACTTACTGCCTCAGTTGCAGCAACAGCAGCACAGATTGCATTATCCTGTTCAAGCGTCAGCTGGCTTAATGTCAGGTTTACAGCCCCATTTATTTAATCACCATCTTCCGTCTGGATCATCCATCGTTAGAGAGAATAGACAAAAATCAACCCGTAAACATCGGGTCTCTCAACAGGGTTCTAATGCCAGTAGCCAGAAAAGCGAAAGTTGTTCAATACAGTTCAGGTCGAAGTATATGTCTAGCGAAGAAATTGAGAGTATTCTTAAAATGCAGCTTGCTGCTGTTACTCATTTTAATGACCCCTATATTGATGATTATTATCACCAAGCTTCTCTTGCAAAAAAACCTTCTGGGGCTAAATTTAAATTTTCATTTTGCCCAACCAAAATGAAGGATCTTTCTTCACGAGCCCGTGCCAATACTGAGCCACACAGGTTTCTTCAGGTTGATACTATAGGGAGGATTTCGTACTTGCCCATTCGTCAGCCTCGCCCTCTTCTTGAAGCTGATCCTCCAAACTCCTCTGCCAGTGGTGGCTCTGAGCGAATTATTTCAGAGAAGTCCCTTGAGCAGGAGCCATTGTTCGCAGCCAGAATCACTATTGAGGATGGTCTCTGTCTTCTCCTCGATGTAGATGATATTGATCGTTTCCTTAAGTGCAATCTTCTACAAGATGGTGGAACTCAATTCACAAGAAGAAGGAATGTCCTTTTGGAAGGACTAGCAACATCACTTCATCTCGTGGACCCGCTAGGAAAGAATGGACACAAAGCTGGTCTTACTGCCAAGGATGACCTTGTCTTCTTACGACTAGCATCTATTTCCAAGGGACGGAAGCTCCTAGCGAAGTATCTTCGGTTGCTTGATCCTGGTAGTGAGCTTGTGCGGATTGTCTGCATGGCTATATTTCGTCATTTAAGATTTTTATTCGGTAGTATCCCCTCTGATTCAGCAGCAGCAGAGACTGCCAGTGATCTTGCTATGGTTGTTTGTCAGTGTATCGAAGGAATGGATCTTGGTTCTCTTGGTGCTTGTCTTGCAGCAGTGGTTTGTTCCTCAGAGCCTCCTCCTCTGCGCCCCCTCGGAAGTCCTGCTGGAGATGGTGCTTCCCTTGTTTTAGTATCTGTTCTCGAGACCGCTACCGAACTTCTAACTGGTTCTCAAGCTGCTTCGAACAAAAAATTGGGAAATCGTTCATTTTGGCAGGGCTCATTTGATGAATTTTTTGATCTCCTCACAAAGTATTGCATGAATAAGTACCAGAGTATCATGCAGTCACTGGTTATACAAGGGGAACAAAATGTGGCTGCGATTGGATCAGATGCTGCTAAAGTAGTTAGTAAGGAAATGCCTGTTGAGCTCTTGCGTGCAAGTCTTCCTCACACCAACGACCGGCAGAGAAAGTTATTACTAGATTTCGCTCAGCGCTCTTCGCCTGTGGCTGGATTTAACAGCTATGCTGGGAGCAGTAGTAATAGTCATGTGAACTCGGAGACAGTGCTTAGTTGA
Protein sequence

>Msa1324920

MDVFNAAAVDSLVASNNQDLNLLGNLTKDGALFDASQYAFFGKDVAEEVELGGLDDVNDYIPSVTFNEEEFFHNEEETDDVRSLSDIDDLTTTFSKLNKIVSGPKSAGVIGDRVSRENSSASEWSQRDDVPYWVDEGSQDGKRWSSHPHSSVAHIQESKPLYRTSSYPEQQRQLQHQLQHRSSEPVPNWFDQQLYDSETVDDDRRWSSHPHSSISHIEGPMPLHRTSSYPDKQQELHRFLSEPILAPKSSFTSYPPPGGRSQQSSPNYSTGQLNIPYAGGAHMALSSQNRSHLFNSASHLGGPKYEPHLGGNLAQFNTGSPLNNRIQNQWINQTGLYLGDNSNLLNNMLQQQLYHHNGSVSPHLLPQLQQQQHRLHYPVQASAGLMSGLQPHLFNHHLPSGSSIVRENRQKSTRKHRVSQQGSNASSQKSESCSIQFRSKYMSSEEIESILKMQLAAVTHFNDPYIDDYYHQASLAKKPSGAKFKFSFCPTKMKDLSSRARANTEPHRFLQVDTIGRISYLPIRQPRPLLEADPPNSSASGGSERIISEKSLEQEPLFAARITIEDGLCLLLDVDDIDRFLKCNLLQDGGTQFTRRRNVLLEGLATSLHLVDPLGKNGHKAGLTAKDDLVFLRLASISKGRKLLAKYLRLLDPGSELVRIVCMAIFRHLRFLFGSIPSDSAAAETASDLAMVVCQCIEGMDLGSLGACLAAVVCSSEPPPLRPLGSPAGDGASLVLVSVLETATELLTGSQAASNKKLGNRSFWQGSFDEFFDLLTKYCMNKYQSIMQSLVIQGEQNVAAIGSDAAKVVSKEMPVELLRASLPHTNDRQRKLLLDFAQRSSPVAGFNSYAGSSSNSHVNSETVLS*