AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0097360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097360 MtrunA17_Chr1g0152641 94.600 926 12 1 481 1368 369 1294 0.0 1816
Msa0097360 MtrunA17_Chr1g0152641 82.877 438 42 2 1 437 1 406 0.0 668
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097360 AT1G27750.1 39.443 431 212 11 426 843 280 674 1.42e-79 286
Msa0097360 AT1G27750.1 37.173 382 186 7 33 400 1 342 9.39e-64 238
Msa0097360 AT1G27750.1 64.912 114 40 0 1253 1366 960 1073 5.96e-37 152

Find 383 sgRNAs with CRISPR-Local

Find 9 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAAAACACACTGATTAAT+TGG 0.118102 1_3:-3173116 None:intergenic
GGACTGCCATTAAAATTATT+TGG 0.169076 1_3:-3176909 None:intergenic
CCAGTCAGAGTTTGTTTCTT+TGG 0.173598 1_3:-3180883 None:intergenic
TTAATGAATTTAAAATAATT+TGG 0.188073 1_3:+3181121 Msa0097360:three_prime_UTR
CGGGATTATCTTGCATATTC+AGG 0.209808 1_3:-3170097 None:intergenic
TGAAACCTAATATGGCTTTC+AGG 0.210970 1_3:-3174725 None:intergenic
TGTGTAACCTGAATTCTATT+TGG 0.228137 1_3:-3175672 None:intergenic
GGATGAGGAGGTGGCATTTC+AGG 0.246362 1_3:-3177053 None:intergenic
GGTTTCCTTCCTCCAACTTC+TGG 0.249117 1_3:-3176575 None:intergenic
ATGAGAGGAACAAGAATATA+TGG 0.254780 1_3:+3172598 Msa0097360:CDS
TCTCTATTTGAAACCTAATA+TGG 0.258138 1_3:-3174733 None:intergenic
GACATCATTTCCCTCAAATA+AGG 0.259090 1_3:-3170051 None:intergenic
TAGATATTGTTGCTGCTTCT+AGG 0.262723 1_3:+3174669 Msa0097360:CDS
ACGATTCTCAGCATTCATTC+TGG 0.263588 1_3:-3176486 None:intergenic
ATCAAGGAAAGTAGTTTATA+AGG 0.265694 1_3:+3175003 Msa0097360:CDS
TATAATAATTGTCCAATCAT+AGG 0.283265 1_3:+3180907 Msa0097360:exon
CTTTGAGTGTGCGTTGCTTA+TGG 0.283920 1_3:+3175051 Msa0097360:CDS
ACATGCCTGAAAGCCATATT+AGG 0.285770 1_3:+3174720 Msa0097360:CDS
AAACTACTTTCCTTGATTCA+TGG 0.286044 1_3:-3174997 None:intergenic
AGAATTGCTTGCAGCTTGTT+TGG 0.287198 1_3:+3170232 Msa0097360:CDS
TGCAATACTGATGTAGTTTC+CGG 0.293300 1_3:-3174020 None:intergenic
AGTATTTGCAACCTTGCTAT+TGG 0.294882 1_3:+3175517 Msa0097360:CDS
GCACAAAACAATTTGACTTT+TGG 0.299113 1_3:-3174624 None:intergenic
CTTACAACATTAACTGTTCC+TGG 0.300190 1_3:-3175163 None:intergenic
GTTACTGAAACAGGTATAAA+AGG 0.303148 1_3:-3176930 None:intergenic
TCAGTATTGCAAGGAATTCT+TGG 0.304409 1_3:+3174032 Msa0097360:CDS
ATTCCATATTGACTGGTTCT+TGG 0.304749 1_3:-3177178 None:intergenic
CCCAATTAATCAGTGTGTTT+TGG 0.306483 1_3:+3173115 Msa0097360:CDS
TGGGGATCCCATTGGCCATT+TGG 0.306521 1_3:-3176837 None:intergenic
ATCTGATTGCCTAATTGCTT+TGG 0.311134 1_3:+3180854 Msa0097360:CDS
TGATGAAGCAGTTCACCTTT+TGG 0.316077 1_3:+3170337 Msa0097360:CDS
TCCTTGCCGTGTAAAATTCA+TGG 0.316278 1_3:+3174868 Msa0097360:CDS
AGTAGTTATAGCCCACATTT+TGG 0.319325 1_3:+3175139 Msa0097360:CDS
CAGTCAGAGTTTGTTTCTTT+GGG 0.319557 1_3:-3180882 None:intergenic
ATAGAATCGTTACATGATTT+AGG 0.319970 1_3:-3170377 None:intergenic
GCAGGTTCGCACTTTGATAA+TGG 0.322912 1_3:+3174320 Msa0097360:intron
CAAGCTGCAAGCAATTCTTT+TGG 0.324769 1_3:-3170227 None:intergenic
GCGTTTAGTCATGTCTAATT+TGG 0.326423 1_3:-3177564 None:intergenic
ATGACGGAGGCAGCTTCTTC+AGG 0.326720 1_3:-3175085 None:intergenic
TGTCAGTAGAGCTGTCAAAA+TGG 0.327794 1_3:+3181029 Msa0097360:three_prime_UTR
CCAAGTATTATAGTGTAGTT+TGG 0.328852 1_3:+3181342 Msa0097360:three_prime_UTR
TTAGAACAGCAGTAGACTTT+AGG 0.328999 1_3:+3174444 Msa0097360:CDS
CCATTTGGAGGAACATAAAC+AGG 0.332353 1_3:-3176822 None:intergenic
ACCTTGAGGTCCAGGTGAGC+AGG 0.334241 1_3:-3175226 None:intergenic
CTGTCTTCACTTGTGGAAGA+TGG 0.345349 1_3:-3179004 None:intergenic
GCTCAAGGAGGATGCTGATT+TGG 0.345568 1_3:+3173082 Msa0097360:CDS
TTTGCCCGCCCCTGCTCACC+TGG 0.346260 1_3:+3175216 Msa0097360:CDS
CAATATGCATAACTGGAGTT+TGG 0.346438 1_3:+3169857 Msa0097360:CDS
GGCAGCGGAGGAGGAGGAGG+TGG 0.350860 1_3:-3177152 None:intergenic
GCAGCTTGTTTGGAACTCTT+AGG 0.356964 1_3:+3170242 Msa0097360:CDS
GCTCATCATCTGTGAGGAAC+TGG 0.357067 1_3:-3175489 None:intergenic
TCCGAGGAACTTGAAAATAT+TGG 0.357853 1_3:+3174161 Msa0097360:CDS
CTTGTTCGACTGCTGTCGGC+AGG 0.360408 1_3:-3175295 None:intergenic
TGTAAGTGGGCATGGTTATA+TGG 0.362725 1_3:+3175180 Msa0097360:CDS
TGTCCAAGAACCAGTCAATA+TGG 0.363409 1_3:+3177175 Msa0097360:CDS
TTTGAATCGCATCGGAGATA+TGG 0.363635 1_3:-3170454 None:intergenic
ACCAGTCAATATGGAATGTT+CGG 0.365855 1_3:+3177184 Msa0097360:CDS
TCTGGCATCTCTCTTGAATC+AGG 0.366858 1_3:-3176557 None:intergenic
TGGAGCTGTCAGCAATGTTC+TGG 0.367185 1_3:+3174562 Msa0097360:CDS
AAATAGCAGCCTTGCCCATA+TGG 0.375358 1_3:-3180778 None:intergenic
ACACGGCAAGGAAAATTTCC+AGG 0.384319 1_3:-3174857 None:intergenic
GCATTACAACAGTTTGGTAT+TGG 0.386020 1_3:-3176887 None:intergenic
CCAGTCAATATGGAATGTTC+GGG 0.387918 1_3:+3177185 Msa0097360:CDS
TCATTATCAATATGCATAAC+TGG 0.389024 1_3:+3169850 Msa0097360:CDS
AACTCCACTTGCTCAAATAC+AGG 0.389251 1_3:+3176950 Msa0097360:CDS
TATAACTACTTCTTTCTCTT+CGG 0.390507 1_3:-3175126 None:intergenic
AGTTGAGTACAGAAGGATAA+TGG 0.390614 1_3:+3174808 Msa0097360:CDS
GGAGAACCAGGTGGAGGAGG+TGG 0.392145 1_3:-3177128 None:intergenic
TTGGAAATGTTTCCAGTCAA+TGG 0.392647 1_3:+3174957 Msa0097360:CDS
AGCGGAGGAGGAGGAGGTGG+AGG 0.392797 1_3:-3177149 None:intergenic
CTCATCCTTGGCCCATTGAC+TGG 0.394751 1_3:-3174969 None:intergenic
TGGATGTGGGACTTGGTAGT+AGG 0.395415 1_3:+3174888 Msa0097360:CDS
TGGGTAAAACCAAAGCAATT+AGG 0.396740 1_3:-3180863 None:intergenic
TATTTGGCATTACAACAGTT+TGG 0.396919 1_3:-3176893 None:intergenic
CCAACATCAGCTGTAATTAG+AGG 0.399422 1_3:+3169984 Msa0097360:CDS
TTTAGGAGTAATTCATTTGA+TGG 0.402515 1_3:+3174461 Msa0097360:CDS
AATCCATGTTATGCTAATCT+AGG 0.403204 1_3:-3181066 None:intergenic
CAATCTCTACACAGCAATCC+AGG 0.404185 1_3:+3176401 Msa0097360:intron
ATTGGTGAAAGATCACAAAA+AGG 0.404198 1_3:+3174179 Msa0097360:CDS
CACCTCTGTCTCAATCAAAC+TGG 0.404936 1_3:+3176528 Msa0097360:CDS
CGATTCTCAGCATTCATTCT+GGG 0.408688 1_3:-3176485 None:intergenic
TTCCAGTCATATAATTATCA+TGG 0.412885 1_3:-3175387 None:intergenic
TTGCTGCTTCTAGGCAGCTA+TGG 0.414015 1_3:+3174678 Msa0097360:CDS
TCTTGGACAGGCAGCGGAGG+AGG 0.414387 1_3:-3177161 None:intergenic
ACAGGCAGCGGAGGAGGAGG+AGG 0.414418 1_3:-3177155 None:intergenic
TCCCAGCTTCAAAATCCATA+TGG 0.416213 1_3:+3180763 Msa0097360:CDS
AGAAAGTGAGAGCTAGTTTC+CGG 0.416983 1_3:-3168114 None:intergenic
GGAGGTCATGGCAGTGGTGG+TGG 0.418324 1_3:-3168031 None:intergenic
GCAAGTGGAGTTACTGAAAC+AGG 0.422828 1_3:-3176939 None:intergenic
TGAGAGCTAGTTTCCGGTTG+TGG 0.423031 1_3:-3168108 None:intergenic
AAAGAGCTGTTTGCTTATGC+TGG 0.423377 1_3:+3170475 Msa0097360:CDS
GCTGTCAAAATGGGTTAATC+TGG 0.423521 1_3:+3181039 Msa0097360:three_prime_UTR
GGAGGAATCTGCTGGTTATA+CGG 0.423902 1_3:-3176987 None:intergenic
CCTGTTTATGTTCCTCCAAA+TGG 0.424400 1_3:+3176822 Msa0097360:CDS
TGTCTTCACTTGTGGAAGAT+GGG 0.425821 1_3:-3179003 None:intergenic
TGGACAGGCAGCGGAGGAGG+AGG 0.427001 1_3:-3177158 None:intergenic
GAACCAGGTGGAGGAGGTGG+AGG 0.428076 1_3:-3177125 None:intergenic
ATGCATATTGATAATGACTT+TGG 0.428778 1_3:-3169844 None:intergenic
TGCTGCTTCTAGGCAGCTAT+GGG 0.429660 1_3:+3174679 Msa0097360:CDS
CAATGATCTTACCCTATGAT+TGG 0.430206 1_3:-3180919 None:intergenic
AGGAGGTGGCAAGGATGATA+AGG 0.430608 1_3:-3177027 None:intergenic
GGATGTGGGACTTGGTAGTA+GGG 0.431978 1_3:+3174889 Msa0097360:CDS
CCAAACTACACTATAATACT+TGG 0.433213 1_3:-3181342 None:intergenic
TGGTGACATAAAACGATGAT+TGG 0.434920 1_3:-3174591 None:intergenic
TTGAGCTCATTATCTACAAC+TGG 0.436565 1_3:-3173065 None:intergenic
CCTCATGCTCGAGCTTTACA+TGG 0.436914 1_3:+3175268 Msa0097360:CDS
ATTCGTGAAGATTGAAGAAT+CGG 0.439710 1_3:-3174114 None:intergenic
TTTAGTCATGTCTAATTTGG+TGG 0.445286 1_3:-3177561 None:intergenic
GAGGTCCAGGTGAGCAGGGG+CGG 0.445937 1_3:-3175221 None:intergenic
AGGACCCCTCACTGCGGAAG+TGG 0.446266 1_3:+3173949 Msa0097360:CDS
CTCAAGGTCAGCAACTCTGC+TGG 0.447124 1_3:+3175241 Msa0097360:CDS
GATTTAATTCCTCGATATGC+TGG 0.447516 1_3:+3169792 Msa0097360:CDS
GGAGGATGTGGATGAGGAGG+TGG 0.447643 1_3:-3177062 None:intergenic
GGAGGAGGTGGAGGAGAACC+AGG 0.447790 1_3:-3177140 None:intergenic
TGACGGAGGCAGCTTCTTCA+GGG 0.449440 1_3:-3175084 None:intergenic
GGTCATGGCAGTGGTGGTGG+TGG 0.452029 1_3:-3168028 None:intergenic
ACCGTCGCAATCGCCACAAC+CGG 0.453422 1_3:+3168095 Msa0097360:CDS
ATATGGCTTTCAGGCATGTC+AGG 0.453605 1_3:-3174716 None:intergenic
TCCGTGCATTATGTATACTT+AGG 0.456018 1_3:+3170189 Msa0097360:CDS
CCGTGCATTATGTATACTTA+GGG 0.456433 1_3:+3170190 Msa0097360:CDS
CTCCATGATAATTATATGAC+TGG 0.461826 1_3:+3175385 Msa0097360:CDS
AAGAATCTGCGTGGTTGTCC+AGG 0.462528 1_3:+3175640 Msa0097360:CDS
TTGTGGAAGATGGGATTAAA+CGG 0.462840 1_3:-3178994 None:intergenic
GGAGGAGAACCAGGTGGAGG+AGG 0.463281 1_3:-3177131 None:intergenic
TCAAGGAAAGTAGTTTATAA+GGG 0.463944 1_3:+3175004 Msa0097360:CDS
TAACTGATTGTTTATTCCAT+GGG 0.465945 1_3:-3176856 None:intergenic
AGTTGCTGACCTTGAGGTCC+AGG 0.466436 1_3:-3175234 None:intergenic
ACAGTTTGGTATTGGTTCAC+AGG 0.468977 1_3:-3176879 None:intergenic
TGGAAATGTTTCCAGTCAAT+GGG 0.469071 1_3:+3174958 Msa0097360:CDS
AGAAAATTCTGATCAAGATC+AGG 0.469122 1_3:-3168273 None:intergenic
ATAGAAACTATGTGATTCCT+AGG 0.469211 1_3:+3174135 Msa0097360:CDS
GTTGAATGTAGTAATGTTGA+CGG 0.469298 1_3:+3175601 Msa0097360:CDS
GTTCCTCCACCTCCTCCACC+TGG 0.470971 1_3:+3177122 Msa0097360:CDS
TCTAGTTCTCATATTTATGT+TGG 0.471081 1_3:+3174938 Msa0097360:CDS
AGGTCCAGGTGAGCAGGGGC+GGG 0.471251 1_3:-3175220 None:intergenic
AGGTGAGCAGGGGCGGGCAA+AGG 0.471496 1_3:-3175214 None:intergenic
TCAAGTTCCTCGGAGATCCT+AGG 0.472209 1_3:-3174152 None:intergenic
AGGTTTCAAATAGAGAGGTT+TGG 0.472541 1_3:+3174740 Msa0097360:CDS
TGAGAAGGAGGATGTGGATG+AGG 0.472640 1_3:-3177068 None:intergenic
CTCGCTCACTAATGCTTCAC+CGG 0.475487 1_3:+3174001 Msa0097360:CDS
TTTATATTCTTCCCATCGAA+TGG 0.476813 1_3:+3174776 Msa0097360:CDS
CCTCTAATTACAGCTGATGT+TGG 0.476989 1_3:-3169984 None:intergenic
GGCATTTCAGGCTGAGGAGG+TGG 0.477115 1_3:-3177041 None:intergenic
GTCAGTAGAGCTGTCAAAAT+GGG 0.477979 1_3:+3181030 Msa0097360:three_prime_UTR
GTAACTGATTGTTTATTCCA+TGG 0.480937 1_3:-3176857 None:intergenic
GACTGAATTTGTTGTGGTGG+TGG 0.482115 1_3:-3176783 None:intergenic
CCATTGGAGTTATTTGGAAA+CGG 0.482552 1_3:-3167930 None:intergenic
TCAAGAGAGATGCCAGAAGT+TGG 0.484043 1_3:+3176563 Msa0097360:CDS
ATATTGACTGGTTCTTGGAC+AGG 0.484939 1_3:-3177173 None:intergenic
CCAAAACACACTGATTAATT+GGG 0.485325 1_3:-3173115 None:intergenic
AGCATATCGAGGAATTAAAT+CGG 0.487296 1_3:-3169790 None:intergenic
GGCATTGACTAGTAAGGAAG+AGG 0.488253 1_3:+3169878 Msa0097360:CDS
TCAGGTAGAGGTGGCTGAGA+AGG 0.488262 1_3:-3177083 None:intergenic
GATGCGGCTTCCAAAGCTGT+TGG 0.489612 1_3:-3169822 None:intergenic
TACCCTTCTGTCTTCACTTG+TGG 0.490001 1_3:-3179011 None:intergenic
GAGTTTGGCATTGACTAGTA+AGG 0.490812 1_3:+3169872 Msa0097360:CDS
TGGTCACTGTCCAACAGCTT+TGG 0.492119 1_3:+3169812 Msa0097360:CDS
AGAGTCCACTTCCGCAGTGA+GGG 0.492249 1_3:-3173954 None:intergenic
TCCAAATAACTCCAATGGAG+GGG 0.493073 1_3:+3167935 Msa0097360:exon
GGAGGTGGAGGAACCAAGGG+GGG 0.493285 1_3:-3177113 None:intergenic
TGCTGGTTATACGGTTGCAT+TGG 0.493720 1_3:-3176978 None:intergenic
TGTTCCTCCAAATGGCCAAT+GGG 0.493777 1_3:+3176830 Msa0097360:CDS
GGAGGAGGTGGAGGAACCAA+GGG 0.493778 1_3:-3177116 None:intergenic
AACCTTGCTATTGGAAACTC+TGG 0.496041 1_3:+3175526 Msa0097360:CDS
AAGGGTGGTGGTACAATTGA+GGG 0.497200 1_3:-3177008 None:intergenic
TAAGGGTGGTGGTACAATTG+AGG 0.497304 1_3:-3177009 None:intergenic
GGAACAGCATTCTGATTCCC+TGG 0.498113 1_3:-3176419 None:intergenic
AAAGCTCGACACTGTGCACC+TGG 0.500196 1_3:+3174839 Msa0097360:CDS
GGAGAGTGGTGAGTTTGTTA+CGG 0.500670 1_3:-3168007 None:intergenic
ATTGATAATGACTTTGGATG+CGG 0.503938 1_3:-3169838 None:intergenic
TTATTCCATGGGGATCCCAT+TGG 0.504735 1_3:-3176845 None:intergenic
GATAAATGATCATAACCATC+AGG 0.505244 1_3:-3176596 None:intergenic
CCCTGCTCACCTGGACCTCA+AGG 0.505509 1_3:+3175225 Msa0097360:CDS
CATCATTTGCTCTACCCAAA+AGG 0.506800 1_3:-3170352 None:intergenic
ATCGGAGATATGGTTGTCAT+TGG 0.507376 1_3:-3170444 None:intergenic
CCTTGAGGTCCAGGTGAGCA+GGG 0.507405 1_3:-3175225 None:intergenic
GGCAGTGCAATGGCGGAGAT+CGG 0.507776 1_3:+3172556 Msa0097360:intron
GGTGGCTGAGAAGGAGGATG+TGG 0.507911 1_3:-3177074 None:intergenic
GGAGGTGGCAAGGATGATAA+GGG 0.509170 1_3:-3177026 None:intergenic
AGGTCTGTGGGCGTTGAGAA+AGG 0.509962 1_3:+3174353 Msa0097360:CDS
GGTGACATAAAACGATGATT+GGG 0.510137 1_3:-3174590 None:intergenic
TTGATAATGGAGGGGTATCA+AGG 0.510443 1_3:+3174333 Msa0097360:CDS
TTCAATTCAGAAAAGACCTC+GGG 0.511163 1_3:-3170116 None:intergenic
TATAATATTAATCAAAACAT+AGG 0.511615 1_3:+3175361 Msa0097360:CDS
TTGCTTTAGTTGAGTACAGA+AGG 0.512345 1_3:+3174801 Msa0097360:CDS
GGAACAGTTAATGTTGTAAG+TGG 0.512377 1_3:+3175166 Msa0097360:CDS
CCCGAACATTCCATATTGAC+TGG 0.512561 1_3:-3177185 None:intergenic
CGTATCATATTTAAAACAGA+GGG 0.512778 1_3:+3180719 Msa0097360:CDS
TGTTAGATGTTCCACACCTA+GGG 0.514051 1_3:+3174388 Msa0097360:CDS
ATGAGATTCTCCATGAATCA+AGG 0.515198 1_3:+3174987 Msa0097360:CDS
ACTGGTTCTTGGACAGGCAG+CGG 0.518144 1_3:-3177167 None:intergenic
ACTAAAGCAAATCCATTCGA+TGG 0.521176 1_3:-3174788 None:intergenic
CCCAGCTTCAAAATCCATAT+GGG 0.521252 1_3:+3180764 Msa0097360:CDS
TGGTTATGATCATTTATCAC+TGG 0.521982 1_3:+3176601 Msa0097360:CDS
GTTAATGTTGTAAGTGGGCA+TGG 0.522278 1_3:+3175172 Msa0097360:CDS
GGAAGGCATCAAAGAGATTG+AGG 0.522895 1_3:+3170403 Msa0097360:CDS
ATGTTCCTCCAAATGGCCAA+TGG 0.523209 1_3:+3176829 Msa0097360:CDS
TTCGCTTGTAACCTTCATAG+AGG 0.523556 1_3:-3168212 None:intergenic
TTCATGGAGAATCTCATCCT+TGG 0.523979 1_3:-3174981 None:intergenic
TGGAGGAGGTGGAGGAACCA+AGG 0.525420 1_3:-3177117 None:intergenic
ATTCTGATCAAGATCAGGTA+TGG 0.525681 1_3:-3168268 None:intergenic
ATAATAATTGTCCAATCATA+GGG 0.525955 1_3:+3180908 Msa0097360:exon
GCAACAATATCTACAGCAGC+AGG 0.529464 1_3:-3174659 None:intergenic
CATTCTTGTTCGACTGCTGT+CGG 0.530579 1_3:-3175299 None:intergenic
TAAACCTGAAAACCGTGCTA+TGG 0.530588 1_3:+3176451 Msa0097360:CDS
CTTAGGCTCCACCACAAAAG+AGG 0.531128 1_3:+3170259 Msa0097360:CDS
CCAAAGAAACAAACTCTGAC+TGG 0.531250 1_3:+3180883 Msa0097360:CDS
TCCGGTTGTGGCGATTGCGA+CGG 0.532016 1_3:-3168096 None:intergenic
GGATCCCATTGGCCATTTGG+AGG 0.532445 1_3:-3176834 None:intergenic
AGGATGTTCGACGGAGGTCA+TGG 0.532696 1_3:-3168043 None:intergenic
CCGTGTAAAATTCATGGATG+TGG 0.532850 1_3:+3174874 Msa0097360:CDS
GCAGTGGTGGTGGTGGAGAG+TGG 0.533264 1_3:-3168021 None:intergenic
TCTTGAGACAACGGCGGAGT+AGG 0.534365 1_3:-3168147 None:intergenic
CATGCATACTCTGGAGCACA+TGG 0.538597 1_3:+3176750 Msa0097360:CDS
ATATGGGATTCAAATGATCC+AGG 0.538735 1_3:+3172615 Msa0097360:CDS
GGTGGAGGAGAACCAGGTGG+AGG 0.538781 1_3:-3177134 None:intergenic
GAGGAGGTGGAGGAACCAAG+GGG 0.539236 1_3:-3177115 None:intergenic
AGAGAGATGCCAGAAGTTGG+AGG 0.541099 1_3:+3176566 Msa0097360:CDS
GGTAGTAGGGGTGCAGTGAA+TGG 0.541975 1_3:+3174902 Msa0097360:CDS
CCGTTTCCAAATAACTCCAA+TGG 0.542175 1_3:+3167930 Msa0097360:exon
ACTGTTCCTGGACCAAAATG+TGG 0.542196 1_3:-3175151 None:intergenic
TTAGTCATGTCTAATTTGGT+GGG 0.542281 1_3:-3177560 None:intergenic
TTGTTCGACTGCTGTCGGCA+GGG 0.543735 1_3:-3175294 None:intergenic
GAGACAACGGCGGAGTAGGT+AGG 0.544305 1_3:-3168143 None:intergenic
ACATAAACAGGGCGGGTGAA+AGG 0.544648 1_3:-3176810 None:intergenic
GGTTGTGTCTCAGGTAGAGG+TGG 0.544798 1_3:-3177092 None:intergenic
AAATTCATGGATGTGGGACT+TGG 0.545243 1_3:+3174881 Msa0097360:CDS
AATTTGTTGTGGTGGTGGAA+TGG 0.545481 1_3:-3176778 None:intergenic
TGAGAGGAACAAGAATATAT+GGG 0.545922 1_3:+3172599 Msa0097360:CDS
CTCATCATCTGTGAGGAACT+GGG 0.546150 1_3:-3175488 None:intergenic
AATTAGGCAATCAGATGGAT+CGG 0.546397 1_3:-3180847 None:intergenic
CTGCTTTGGCAGTGCAATGG+CGG 0.547460 1_3:+3172549 Msa0097360:intron
AGACAACGGCGGAGTAGGTA+GGG 0.547594 1_3:-3168142 None:intergenic
GGTAGAGGTGGCTGAGAAGG+AGG 0.549030 1_3:-3177080 None:intergenic
GCAATTCGAAACCTCTATGA+AGG 0.549036 1_3:+3168201 Msa0097360:CDS
TGGAGGAAGATTGTTTCTGA+AGG 0.550894 1_3:-3168248 None:intergenic
ATCATGTAACGATTCTATTG+AGG 0.551269 1_3:+3170382 Msa0097360:CDS
GGCATCAAAGAGATTGAGGT+TGG 0.551976 1_3:+3170407 Msa0097360:CDS
GTTCCCTGTATTTGAGCAAG+TGG 0.552530 1_3:-3176954 None:intergenic
AATTGTTATCCACAGAGTGT+TGG 0.552606 1_3:-3175452 None:intergenic
GAGTGGTGAGTTTGTTACGG+TGG 0.552609 1_3:-3168004 None:intergenic
TTCGACGGAGGTCATGGCAG+TGG 0.554697 1_3:-3168037 None:intergenic
GCAGTGAATGGTGTTGCAGT+TGG 0.555294 1_3:+3174914 Msa0097360:CDS
ATTAGGCAATCAGATGGATC+GGG 0.556059 1_3:-3180846 None:intergenic
AATGTTCCACATGCATACTC+TGG 0.558674 1_3:+3176741 Msa0097360:CDS
GATATGGTTGTCATTGGTGA+CGG 0.559004 1_3:-3170438 None:intergenic
GCTTCTAGGCAGCTATGGGT+AGG 0.560484 1_3:+3174683 Msa0097360:CDS
CACTGCATCTTCCTCACGCG+TGG 0.561946 1_3:-3175425 None:intergenic
GGTTGTGGCGATTGCGACGG+TGG 0.562189 1_3:-3168093 None:intergenic
TGCTTGTGTCAACCGTGCAA+TGG 0.563500 1_3:-3175551 None:intergenic
AGTTTCAAATGCAATACCAT+TGG 0.564003 1_3:-3169904 None:intergenic
AGGAGGTGGAGGAACCAAGG+GGG 0.564199 1_3:-3177114 None:intergenic
TGATGGCTTACAGAGTCCCT+AGG 0.566602 1_3:-3174404 None:intergenic
GGTGGCATTTCAGGCTGAGG+AGG 0.567538 1_3:-3177044 None:intergenic
TCTACTGCTGTTCTAACTGT+AGG 0.567594 1_3:-3174437 None:intergenic
TGTTGTGGTGGTGGAATGGA+AGG 0.570607 1_3:-3176774 None:intergenic
TTCAGGCTGAGGAGGTGGCA+AGG 0.570796 1_3:-3177036 None:intergenic
GATGACTGAATTTGTTGTGG+TGG 0.571692 1_3:-3176786 None:intergenic
AGATGCCAGAAGTTGGAGGA+AGG 0.572164 1_3:+3176570 Msa0097360:CDS
CCATGTTATGCTAATCTAGG+TGG 0.573066 1_3:-3181063 None:intergenic
ATGTTAGATGTTCCACACCT+AGG 0.573238 1_3:+3174387 Msa0097360:CDS
CCAAATAACTCCAATGGAGG+GGG 0.574194 1_3:+3167936 Msa0097360:exon
GGCAAGGATGATAAGGGTGG+TGG 0.574411 1_3:-3177020 None:intergenic
TTCCAAATAACTCCAATGGA+GGG 0.575011 1_3:+3167934 Msa0097360:exon
TTAAAACAGAGGGATTGTGC+TGG 0.575704 1_3:+3180729 Msa0097360:CDS
CTGGCATCTCTCTTGAATCA+GGG 0.576031 1_3:-3176556 None:intergenic
TTTGTGCATGGAATTTCACT+AGG 0.576978 1_3:+3168502 Msa0097360:CDS
AAAGCAATTAGGCAATCAGA+TGG 0.578734 1_3:-3180852 None:intergenic
GTTCGCACTTTGATAATGGA+GGG 0.579237 1_3:+3174324 Msa0097360:CDS
CAGCAGAGTTGCTGACCTTG+AGG 0.579302 1_3:-3175240 None:intergenic
GACGGAGGTCATGGCAGTGG+TGG 0.579639 1_3:-3168034 None:intergenic
GTTTCTGTAATTGATTGCTG+TGG 0.580557 1_3:+3168553 Msa0097360:CDS
AGTGGAAGGAGCAAGTGAGA+AGG 0.581627 1_3:+3173148 Msa0097360:CDS
TTTCAATTCAGAAAAGACCT+CGG 0.581829 1_3:-3170117 None:intergenic
CTAAAGCAAATCCATTCGAT+GGG 0.582079 1_3:-3174787 None:intergenic
AGTTGTAGATAATGAGCTCA+AGG 0.582591 1_3:+3173067 Msa0097360:CDS
ATGGAGGAATCGTTTGTGCA+TGG 0.582833 1_3:+3168490 Msa0097360:CDS
AACCAGAGTTTCCAATAGCA+AGG 0.582905 1_3:-3175528 None:intergenic
GAAACTCTGGTTCCATTGCA+CGG 0.582971 1_3:+3175539 Msa0097360:CDS
AAGTGAGAAGGCGAAGAGGA+TGG 0.584005 1_3:+3173160 Msa0097360:CDS
ATATTAGGTTTCAAATAGAG+AGG 0.584199 1_3:+3174735 Msa0097360:CDS
GGTTCGCACTTTGATAATGG+AGG 0.586764 1_3:+3174323 Msa0097360:intron
GGAGGTGGCATTTCAGGCTG+AGG 0.587108 1_3:-3177047 None:intergenic
GCAGCTATGGGTAGGTTGTG+TGG 0.588471 1_3:+3174691 Msa0097360:CDS
CTTCCACAAGTGAAGACAGA+AGG 0.588817 1_3:+3179008 Msa0097360:CDS
GAAGGAGGATGTGGATGAGG+AGG 0.590166 1_3:-3177065 None:intergenic
TAGGTGTGGAACATCTAACA+TGG 0.590234 1_3:-3174385 None:intergenic
GGAGATGACTGAATTTGTTG+TGG 0.590494 1_3:-3176789 None:intergenic
TGATAACTCACTCTATGAGA+TGG 0.590864 1_3:-3177626 None:intergenic
CCACCTAGATTAGCATAACA+TGG 0.591134 1_3:+3181063 Msa0097360:three_prime_UTR
ATGCACAAACGATTCCTCCA+TGG 0.591547 1_3:-3168488 None:intergenic
TGGAGGAACATAAACAGGGC+GGG 0.592018 1_3:-3176817 None:intergenic
TTGGCTGCACTTGAAGTGGA+AGG 0.592746 1_3:+3173134 Msa0097360:CDS
CCTCTGTCGAGGTCCTCTAG+TGG 0.592856 1_3:+3174542 Msa0097360:CDS
GATGCTGATTTGGAAGTGAA+TGG 0.593487 1_3:+3173092 Msa0097360:CDS
TTAGGCTCCACCACAAAAGA+GGG 0.593890 1_3:+3170260 Msa0097360:CDS
GAGTCCACTTCCGCAGTGAG+GGG 0.593964 1_3:-3173953 None:intergenic
GATTCTCAGCATTCATTCTG+GGG 0.594852 1_3:-3176484 None:intergenic
TTTCCAAATAACTCCAATGG+AGG 0.595541 1_3:+3167933 Msa0097360:exon
AGGAACTGGGAGCTACTATG+AGG 0.596083 1_3:-3175475 None:intergenic
CTGTAGGTGAGAACATCTGA+TGG 0.596367 1_3:-3174421 None:intergenic
TCTATATAAGGTTCTTAACA+AGG 0.597267 1_3:+3173929 Msa0097360:intron
CAGAGTCCACTTCCGCAGTG+AGG 0.597909 1_3:-3173955 None:intergenic
GAGCAAGTGAGAAGGCGAAG+AGG 0.600193 1_3:+3173156 Msa0097360:CDS
GAGCACATTTCAAGTGAATG+AGG 0.600845 1_3:-3180807 None:intergenic
TTGCGCTTCTTCCACGCGTG+AGG 0.601033 1_3:+3175414 Msa0097360:CDS
TGGAGGGGTATCAAGGTCTG+TGG 0.602251 1_3:+3174340 Msa0097360:CDS
CTTGAGGTCCAGGTGAGCAG+GGG 0.603640 1_3:-3175224 None:intergenic
AACTGATTGTTTATTCCATG+GGG 0.603764 1_3:-3176855 None:intergenic
TGCCAGTTTGATTGAGACAG+AGG 0.607596 1_3:-3176530 None:intergenic
GGCTCGAGTGTACAGGAGGA+GGG 0.608545 1_3:+3173023 Msa0097360:intron
TGTTTCCAGTCAATGGGCCA+AGG 0.609197 1_3:+3174964 Msa0097360:CDS
AATGCTGAGAATCGTAGTAG+TGG 0.609669 1_3:+3176494 Msa0097360:CDS
AAATGCAAATGGGATGTGGT+TGG 0.611558 1_3:+3175575 Msa0097360:CDS
TTCGCACTTTGATAATGGAG+GGG 0.612231 1_3:+3174325 Msa0097360:CDS
ATTTCAATTCACCTCTGTCG+AGG 0.612569 1_3:+3174531 Msa0097360:CDS
AATCGTAGTAGTGGAGGACA+TGG 0.615602 1_3:+3176503 Msa0097360:CDS
CGTGTAAAATTCATGGATGT+GGG 0.615653 1_3:+3174875 Msa0097360:CDS
CCATGTAAAGCTCGAGCATG+AGG 0.615971 1_3:-3175268 None:intergenic
CCCTAAGTATACATAATGCA+CGG 0.616376 1_3:-3170190 None:intergenic
GTTATCCACAGAGTGTTGGA+TGG 0.618028 1_3:-3175448 None:intergenic
CTTCAAAATCCATATGGGCA+AGG 0.618521 1_3:+3180769 Msa0097360:CDS
TCGTATCATATTTAAAACAG+AGG 0.620721 1_3:+3180718 Msa0097360:CDS
TGTAACGATTCTATTGAGGA+AGG 0.622487 1_3:+3170386 Msa0097360:CDS
CTGATCAAGATCAGGTATGG+AGG 0.624099 1_3:-3168265 None:intergenic
TACTGTAGAATTGAAAACCA+TGG 0.624291 1_3:+3168471 Msa0097360:intron
GGAGGGGTATCAAGGTCTGT+GGG 0.624939 1_3:+3174341 Msa0097360:CDS
CATGTTATGCTAATCTAGGT+GGG 0.625285 1_3:-3181062 None:intergenic
TACGAGTGTACAAAGAATTG+TGG 0.625707 1_3:+3169767 Msa0097360:CDS
GGTTCTTGGACAGGCAGCGG+AGG 0.625958 1_3:-3177164 None:intergenic
TTATCACTGGATCCTCGTCA+AGG 0.626365 1_3:+3176614 Msa0097360:CDS
TTCCACAAGTGAAGACAGAA+GGG 0.627444 1_3:+3179009 Msa0097360:CDS
GAAACTACATCAGTATTGCA+AGG 0.628178 1_3:+3174023 Msa0097360:CDS
GAACAGTTAATGTTGTAAGT+GGG 0.628522 1_3:+3175167 Msa0097360:CDS
AGTGGGCATGGTTATATGGA+TGG 0.629622 1_3:+3175184 Msa0097360:CDS
ACTCCACTTGCTCAAATACA+GGG 0.632303 1_3:+3176951 Msa0097360:CDS
TGCAATGGCGGAGATCGGCA+AGG 0.634386 1_3:+3172561 Msa0097360:CDS
GCTGAGAATCGTAGTAGTGG+AGG 0.635313 1_3:+3176497 Msa0097360:CDS
AGAATTTCATCTTGAGACAA+CGG 0.635627 1_3:-3168156 None:intergenic
CAATTGAGGGAGGAATCTGC+TGG 0.635898 1_3:-3176995 None:intergenic
CTGTTCCTGGACCAAAATGT+GGG 0.637100 1_3:-3175150 None:intergenic
AGGTGTGGAACATCTAACAT+GGG 0.637555 1_3:-3174384 None:intergenic
CTCATGCTCGAGCTTTACAT+GGG 0.638164 1_3:+3175269 Msa0097360:CDS
CAGTGCCATCCAACACTCTG+TGG 0.639870 1_3:+3175443 Msa0097360:CDS
GCTTACAGAGTCCCTAGGTG+TGG 0.640367 1_3:-3174399 None:intergenic
AATCTCTACACAGCAATCCA+GGG 0.642848 1_3:+3176402 Msa0097360:intron
GGTGGTGGTACAATTGAGGG+AGG 0.643179 1_3:-3177005 None:intergenic
CCCTGCCACTGATACTGCAG+CGG 0.643320 1_3:-3177212 None:intergenic
CTGTCTCAGATGCAACATGA+CGG 0.643549 1_3:-3175101 None:intergenic
AGTCAAGCAACTTCTTACAT+CGG 0.645362 1_3:-3173980 None:intergenic
GTGGTATTGAAAACAATGAG+AGG 0.645610 1_3:+3172583 Msa0097360:CDS
AATCTGCTTTGGCAGTGCAA+TGG 0.647018 1_3:+3172546 Msa0097360:intron
GGGAGACAAGCTCCATAGCA+CGG 0.648777 1_3:-3176463 None:intergenic
ATTGCTGACAGCTCCACTAG+AGG 0.648794 1_3:-3174555 None:intergenic
GGTGGCAAGGATGATAAGGG+TGG 0.650804 1_3:-3177023 None:intergenic
GATGTGGGACTTGGTAGTAG+GGG 0.651389 1_3:+3174890 Msa0097360:CDS
GGAGGTGGAGGAGAACCAGG+TGG 0.651816 1_3:-3177137 None:intergenic
CTAAGATCAATCACAGCGAG+AGG 0.651860 1_3:-3175028 None:intergenic
ATTCTCAGCATTCATTCTGG+GGG 0.654459 1_3:-3176483 None:intergenic
AAAGAGGGATCTTCTAACGA+AGG 0.656688 1_3:+3170275 Msa0097360:CDS
AATGGCCAATGGGATCCCCA+TGG 0.657343 1_3:+3176840 Msa0097360:CDS
GCTCTCATCGCATCTTCGAG+AGG 0.658656 1_3:+3168297 Msa0097360:CDS
AGTAAGGAAGAGGATTCCAA+TGG 0.660967 1_3:+3169888 Msa0097360:CDS
GTTGGAGGAAGGAAACCTGA+TGG 0.663261 1_3:+3176581 Msa0097360:CDS
CATTTGGAGGAACATAAACA+GGG 0.672619 1_3:-3176821 None:intergenic
GGACAGTGACCAGCATATCG+AGG 0.676518 1_3:-3169801 None:intergenic
CCACTAGAGGACCTCGACAG+AGG 0.689252 1_3:-3174542 None:intergenic
AAAATATTACCTCCTTGACG+AGG 0.701198 1_3:-3176626 None:intergenic
TCACTGGATCCTCGTCAAGG+AGG 0.702847 1_3:+3176617 Msa0097360:CDS
TCTCAGATGCAACATGACGG+AGG 0.707723 1_3:-3175098 None:intergenic
GGTGTGGAACATCTAACATG+GGG 0.713861 1_3:-3174383 None:intergenic
TGTGCTCCAGAGTATGCATG+TGG 0.715249 1_3:-3176747 None:intergenic
TCATTAGCTCATCATCTGTG+AGG 0.715984 1_3:-3175495 None:intergenic
AATGGCGGAGATCGGCAAGG+TGG 0.720279 1_3:+3172564 Msa0097360:CDS
ACAGTCTTAAAGAATCTGCG+TGG 0.720622 1_3:+3175631 Msa0097360:CDS
TGTAGAATTGAAAACCATGG+AGG 0.722204 1_3:+3168474 Msa0097360:intron
TTGGAGGAACATAAACAGGG+CGG 0.723997 1_3:-3176818 None:intergenic
ATTTCATCTTGAGACAACGG+CGG 0.724403 1_3:-3168153 None:intergenic
CAGTCAATATGGAATGTTCG+GGG 0.727149 1_3:+3177186 Msa0097360:CDS
TGTAGATAATGAGCTCAAGG+AGG 0.733608 1_3:+3173070 Msa0097360:CDS
GAATATGCAAGATAATCCCG+AGG 0.739409 1_3:+3170100 Msa0097360:CDS
TGTGATTCCTAGGATCTCCG+AGG 0.750807 1_3:+3174145 Msa0097360:CDS
TTAACAAGGACCCCTCACTG+CGG 0.803441 1_3:+3173943 Msa0097360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GTTAAAAACAAGGAAAGTTA+AGG - chr1_3:3167891-3167910 None:intergenic 25.0%
!! CAAACTAACAGTAAATTTTG+TGG + chr1_3:3181278-3181297 Msa0097360:three_prime_UTR 25.0%
AGAGTGATGTGTTAAAAACA+AGG - chr1_3:3167901-3167920 None:intergenic 30.0%
AATCCATGTTATGCTAATCT+AGG - chr1_3:3181069-3181088 None:intergenic 30.0%
CCAAACTACACTATAATACT+TGG - chr1_3:3181345-3181364 None:intergenic 30.0%
CCAAGTATTATAGTGTAGTT+TGG + chr1_3:3181342-3181361 Msa0097360:three_prime_UTR 30.0%
CCATGTTATGCTAATCTAGG+TGG - chr1_3:3181066-3181085 None:intergenic 40.0%
CCACCTAGATTAGCATAACA+TGG + chr1_3:3181063-3181082 Msa0097360:three_prime_UTR 40.0%
!!! TTAATGAATTTAAAATAATT+TGG + chr1_3:3181121-3181140 Msa0097360:three_prime_UTR 5.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 3167879 3181371 3167879 ID=Msa0097360;Name=Msa0097360
chr1_3 mRNA 3167879 3181371 3167879 ID=Msa0097360-mRNA-1;Parent=Msa0097360;Name=Msa0097360-mRNA-1;_AED=0.09;_eAED=0.09;_QI=70|0.45|0.66|0.75|0.90|0.91|12|460|1368
chr1_3 exon 3167879 3168318 3167879 ID=Msa0097360-mRNA-1:exon:888;Parent=Msa0097360-mRNA-1
chr1_3 exon 3168479 3168574 3168479 ID=Msa0097360-mRNA-1:exon:889;Parent=Msa0097360-mRNA-1
chr1_3 exon 3169763 3170496 3169763 ID=Msa0097360-mRNA-1:exon:890;Parent=Msa0097360-mRNA-1
chr1_3 exon 3172561 3172659 3172561 ID=Msa0097360-mRNA-1:exon:891;Parent=Msa0097360-mRNA-1
chr1_3 exon 3173038 3173181 3173038 ID=Msa0097360-mRNA-1:exon:892;Parent=Msa0097360-mRNA-1
chr1_3 exon 3173939 3174200 3173939 ID=Msa0097360-mRNA-1:exon:893;Parent=Msa0097360-mRNA-1
chr1_3 exon 3174324 3175686 3174324 ID=Msa0097360-mRNA-1:exon:894;Parent=Msa0097360-mRNA-1
chr1_3 exon 3176415 3176638 3176415 ID=Msa0097360-mRNA-1:exon:895;Parent=Msa0097360-mRNA-1
chr1_3 exon 3176739 3177219 3176739 ID=Msa0097360-mRNA-1:exon:896;Parent=Msa0097360-mRNA-1
chr1_3 exon 3177556 3177637 3177556 ID=Msa0097360-mRNA-1:exon:897;Parent=Msa0097360-mRNA-1
chr1_3 exon 3178983 3179030 3178983 ID=Msa0097360-mRNA-1:exon:898;Parent=Msa0097360-mRNA-1
chr1_3 exon 3180708 3181371 3180708 ID=Msa0097360-mRNA-1:exon:899;Parent=Msa0097360-mRNA-1
chr1_3 five_prime_UTR 3167879 3167948 3167879 ID=Msa0097360-mRNA-1:five_prime_utr;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3167949 3168318 3167949 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3168479 3168574 3168479 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3169763 3170496 3169763 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3172561 3172659 3172561 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3173038 3173181 3173038 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3173939 3174200 3173939 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3174324 3175686 3174324 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3176415 3176638 3176415 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3176739 3177219 3176739 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3177556 3177637 3177556 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3178983 3179030 3178983 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 CDS 3180708 3180911 3180708 ID=Msa0097360-mRNA-1:cds;Parent=Msa0097360-mRNA-1
chr1_3 three_prime_UTR 3180912 3181371 3180912 ID=Msa0097360-mRNA-1:three_prime_utr;Parent=Msa0097360-mRNA-1
Gene Sequence

>Msa0097360

ATGGAGGGGGAGAATCTTCTTAACACAACAAAACTCAAACGACAACATACAGAAACCACCGTAACAAACTCACCACTCTCCACCACCACCACTGCCATGACCTCCGTCGAACATCCTCTAAAAAAGCGAAAGCTCTACGATTCTCCACCGTCGCAATCGCCACAACCGGAAACTAGCTCTCACTTTCTGCAAACCCTACCTACTCCGCCGTTGTCTCAAGATGAAATTCTCGCGAAACGCAGAAACAAAGACGCAATTCGAAACCTCTATGAAGGTTACAAGCGAATTAAACGTTGCATCCTTCAGAAACAATCTTCCTCCATACCTGATCTTGATCAGAATTTTCTTGCTCTCATCGCATCTTCGAGAGAATTGAAAACCATGGAGGAATCGTTTGTGCATGGAATTTCACTAGGTTCTGTTGTTTGTTTGCCTCAAAATGTAGTTTCTGTAATTGATTGCTGTGGTTGTACGAGTGTACAAAGAATTGTGGCCGATTTAATTCCTCGATATGCTGGTCACTGTCCAACAGCTTTGGAAGCCGCATCCAAAGTCATTATCAATATGCATAACTGGAGTTTGGCATTGACTAGTAAGGAAGAGGATTCCAATGGTATTGCATTTGAAACTGCTAAAGCATGTATTTTCGGATTGGCTGATATTTGCTGCATTGCTTCTTCAGTAGCACCAACATCAGCTGTAATTAGAGGAATTCGCTCAACAGTTTTTCAAAATGTGCTCACCTTTTTTGTTGCCTTATTTGAGGGAAATGATGTCTTAAAGATGATTGACAAGAATTTCCTGAATATGCAAGATAATCCCGAGGTCTTTTCTGAATTGAAAGAAAAGGTTTTAGATGAAGATGATTCTTCATTGACTAAATTGTCTAAGTTCCGTGCATTATGTATACTTAGGGTATTCTTCTCTTGTCCAAAAGAATTGCTTGCAGCTTGTTTGGAACTCTTAGGCTCCACCACAAAAGAGGGATCTTCTAACGAAGGACAGCGTTTTCTGAGCATGGTGACTAGCATGCTTAATTATGATGAAGCAGTTCACCTTTTGGGTAGAGCAAATGATGGACCTAAATCATGTAACGATTCTATTGAGGAAGGCATCAAAGAGATTGAGGTTGGCGAGAAAGCCGTCACCAATGACAACCATATCTCCGATGCGATTCAAAAGAGCTGTTTGCTTATGCTGTGCAATGGCGGAGATCGGCAAGGTGGTATTGAAAACAATGAGAGGAACAAGAATATATGGGATTCAAATGATCCAGGAAAAAAGGAGCTCATATCGAAGGAGGAGGGAGTGAATGAGAAAGAGAGTCCAGTTGTAGATAATGAGCTCAAGGAGGATGCTGATTTGGAAGTGAATGGCCCAATTAATCAGTGTGTTTTGGCTGCACTTGAAGTGGAAGGAGCAAGTGAGAAGGCGAAGAGGATGGTTCTTAACAAGGACCCCTCACTGCGGAAGTGGACTCTGCGCCGATGTAAGAAGTTGCTTGACTCGCTCACTAATGCTTCACCGGAAACTACATCAGTATTGCAAGGAATTCTTGGAATGTTCGCTCAACAGACAGAGTTAGAAGACTGTCAAGTAGATAGTGATGAAGATAAGTCCGATTCTTCAATCTTCACGAATAGAAACTATGTGATTCCTAGGATCTCCGAGGAACTTGAAAATATTGGTGAAAGATCACAAAAAGGTTCGCACTTTGATAATGGAGGGGTATCAAGGTCTGTGGGCGTTGAGAAAGGTGATATACCCCATGTTAGATGTTCCACACCTAGGGACTCTGTAAGCCATCAGATGTTCTCACCTACAGTTAGAACAGCAGTAGACTTTAGGAGTAATTCATTTGATGGTAGAAATGAATTCCCAAATGTTGAGAAAAATCAAGTTTCAAATATAAATTTCAATTCACCTCTGTCGAGGTCCTCTAGTGGAGCTGTCAGCAATGTTCTGGCTTCTCCCAATCATCGTTTTATGTCACCAACTTCTTTAACCAAAAGTCAAATTGTTTTGTGCTTTGACGGGGATCCTGCTGCTGTAGATATTGTTGCTGCTTCTAGGCAGCTATGGGTAGGTTGTGTGGCACCTGACATGCCTGAAAGCCATATTAGGTTTCAAATAGAGAGGTTTGGTCCTATTGAAAAGTTTATATTCTTCCCATCGAATGGATTTGCTTTAGTTGAGTACAGAAGGATAATGGACGCAATAAAAGCTCGACACTGTGCACCTGGAAATTTTCCTTGCCGTGTAAAATTCATGGATGTGGGACTTGGTAGTAGGGGTGCAGTGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATGTTTCCAGTCAATGGGCCAAGGATGAGATTCTCCATGAATCAAGGAAAGTAGTTTATAAGGGTCCTCTCGCTGTGATTGATCTTAGCTTTGAGTGTGCGTTGCTTATGGAGTTTGAAAGCCCTGAAGAAGCTGCCTCCGTCATGTTGCATCTGAGACAGCTCCGAAGAGAAAGAAGTAGTTATAGCCCACATTTTGGTCCAGGAACAGTTAATGTTGTAAGTGGGCATGGTTATATGGATGGTGCAAGACCTTTGCCCGCCCCTGCTCACCTGGACCTCAAGGTCAGCAACTCTGCTGGATCACCTCATGCTCGAGCTTTACATGGGAGCCCTGCCGACAGCAGTCGAACAAGAATGTCTCACTTGTGTAACATACTAGCTTCATTGCGTGCAAAGTATAATATTAATCAAAACATAGGTCTCCATGATAATTATATGACTGGAAATAGTTGCGCTTCTTCCACGCGTGAGGAAGATGCAGTGCCATCCAACACTCTGTGGATAACAATTCCTCATAGTAGCTCCCAGTTCCTCACAGATGATGAGCTAATGAGTATTTGCAACCTTGCTATTGGAAACTCTGGTTCCATTGCACGGTTGACACAAGCAAAAATGCAAATGGGATGTGGTTGGTTTGTTGAATGTAGTAATGTTGACGGAGCAGTTACAGTCTTAAAGAATCTGCGTGGTTGTCCAGGACTGTTTTTCCAAATAGAATTCAGCAATCCAGGGAATCAGAATGCTGTTCCATTTGCAATTAAACCTGAAAACCGTGCTATGGAGCTTGTCTCCCCCAGAATGAATGCTGAGAATCGTAGTAGTGGAGGACATGGCGCACCTCTGTCTCAATCAAACTGGCACTTCCCTGATTCAAGAGAGATGCCAGAAGTTGGAGGAAGGAAACCTGATGGTTATGATCATTTATCACTGGATCCTCGTCAAGGAGGAAATGTTCCACATGCATACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCATCTCCTTTCACCCGCCCTGTTTATGTTCCTCCAAATGGCCAATGGGATCCCCATGGAATAAACAATCAGTTACCTGTGAACCAATACCAAACTGTTGTAATGCCAAATAATTTTAATGGCAGTCCTTTTATACCTGTTTCAGTAACTCCACTTGCTCAAATACAGGGAACTCCAATGCAACCGTATAACCAGCAGATTCCTCCCTCAATTGTACCACCACCCTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCTCATCCACATCCTCCTTCTCAGCCACCTCTACCTGAGACACAACCCCCCTTGGTTCCTCCACCTCCTCCACCTGGTTCTCCTCCACCTCCTCCTCCTCCGCTGCCTGTCCAAGAACCAGTCAATATGGAATGTTCGGGGCAGCCGCTGCAATGGCCCACCAAATTAGACATGACTAAACGCACAGATTTTAAACATGTGCAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTAATCCCATCTTCCACAAGTGAAGACAGAAGGTTTCAGGATTTCGTATCATATTTAAAACAGAGGGATTGTGCTGGAGTTATAAAAGTCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTTTTACTTCCTCATTCACTTGAAATGTGCTCGTTGCTTTCTATTGCACCCGATCCATCTGATTGCCTAATTGCTTTGGTTTTACCCAAAGAAACAAACTCTGACTGGTTATAA
Protein sequence

>Msa0097360

MEGENLLNTTKLKRQHTETTVTNSPLSTTTTAMTSVEHPLKKRKLYDSPPSQSPQPETSSHFLQTLPTPPLSQDEILAKRRNKDAIRNLYEGYKRIKRCILQKQSSSIPDLDQNFLALIASSRELKTMEESFVHGISLGSVVCLPQNVVSVIDCCGCTSVQRIVADLIPRYAGHCPTALEAASKVIINMHNWSLALTSKEEDSNGIAFETAKACIFGLADICCIASSVAPTSAVIRGIRSTVFQNVLTFFVALFEGNDVLKMIDKNFLNMQDNPEVFSELKEKVLDEDDSSLTKLSKFRALCILRVFFSCPKELLAACLELLGSTTKEGSSNEGQRFLSMVTSMLNYDEAVHLLGRANDGPKSCNDSIEEGIKEIEVGEKAVTNDNHISDAIQKSCLLMLCNGGDRQGGIENNERNKNIWDSNDPGKKELISKEEGVNEKESPVVDNELKEDADLEVNGPINQCVLAALEVEGASEKAKRMVLNKDPSLRKWTLRRCKKLLDSLTNASPETTSVLQGILGMFAQQTELEDCQVDSDEDKSDSSIFTNRNYVIPRISEELENIGERSQKGSHFDNGGVSRSVGVEKGDIPHVRCSTPRDSVSHQMFSPTVRTAVDFRSNSFDGRNEFPNVEKNQVSNINFNSPLSRSSSGAVSNVLASPNHRFMSPTSLTKSQIVLCFDGDPAAVDIVAASRQLWVGCVAPDMPESHIRFQIERFGPIEKFIFFPSNGFALVEYRRIMDAIKARHCAPGNFPCRVKFMDVGLGSRGAVNGVAVGSSSHIYVGNVSSQWAKDEILHESRKVVYKGPLAVIDLSFECALLMEFESPEEAASVMLHLRQLRRERSSYSPHFGPGTVNVVSGHGYMDGARPLPAPAHLDLKVSNSAGSPHARALHGSPADSSRTRMSHLCNILASLRAKYNINQNIGLHDNYMTGNSCASSTREEDAVPSNTLWITIPHSSSQFLTDDELMSICNLAIGNSGSIARLTQAKMQMGCGWFVECSNVDGAVTVLKNLRGCPGLFFQIEFSNPGNQNAVPFAIKPENRAMELVSPRMNAENRSSGGHGAPLSQSNWHFPDSREMPEVGGRKPDGYDHLSLDPRQGGNVPHAYSGAHGPSIPPPQQIQSSPFTRPVYVPPNGQWDPHGINNQLPVNQYQTVVMPNNFNGSPFIPVSVTPLAQIQGTPMQPYNQQIPPSIVPPPLSSLPPPQPEMPPPHPHPPSQPPLPETQPPLVPPPPPPGSPPPPPPPLPVQEPVNMECSGQPLQWPTKLDMTKRTDFKHVQSTFAATPSHRREVCRLIPSSTSEDRRFQDFVSYLKQRDCAGVIKVPASKSIWARLLFLLPHSLEMCSLLSIAPDPSDCLIALVLPKETNSDWL*