AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1189620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1189620 MtrunA17_Chr8g0358191 95.178 871 31 2 1 866 1 865 0.0 1567
Msa1189620 MtrunA17_Chr2g0312131 68.009 869 248 12 19 866 21 880 0.0 1046
Msa1189620 MtrunA17_Chr2g0312151 56.272 853 310 18 24 865 24 824 0.0 856
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1189620 AT1G79090.2 45.380 855 354 21 14 841 13 781 0.0 634
Msa1189620 AT1G79090.1 45.380 855 354 21 14 841 13 781 0.0 634
Msa1189620 AT1G79090.3 45.380 855 354 21 14 841 13 781 0.0 634
Msa1189620 AT3G22270.1 48.261 690 305 17 189 864 129 780 0.0 579
Msa1189620 AT4G14990.1 43.023 860 372 22 29 864 20 785 0.0 565
Msa1189620 AT4G14990.2 49.094 662 286 15 224 864 79 710 0.0 554

Find 246 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTCTTAATATGTCATTT+TGG 0.144868 8_1:-31677103 Msa1189620:CDS
CAACCAAGATCTTAATCTTT+TGG 0.196811 8_1:-31679821 Msa1189620:CDS
GAAGATGGTGATTAAATAAA+TGG 0.199044 8_1:+31675493 None:intergenic
CTTCGAAATCAAGGGGAAAT+TGG 0.206824 8_1:-31677078 Msa1189620:CDS
GAAGACTTTGGTGCCAAAAT+TGG 0.214292 8_1:+31675939 None:intergenic
TTTGGTTGATCCATTGATTC+TGG 0.218872 8_1:+31675688 None:intergenic
CCAAGATGCGGCTCATATTT+TGG 0.219528 8_1:+31675759 None:intergenic
TAAACACGTCCATCCATAAA+AGG 0.222519 8_1:+31679878 None:intergenic
AATTGGGAAATCGTTCATTT+TGG 0.228135 8_1:-31674396 Msa1189620:CDS
AACTGGCCTGTACTGTAATT+TGG 0.236335 8_1:+31675870 None:intergenic
TGAAGAAAGATCCTTCATTT+TGG 0.246368 8_1:+31675194 None:intergenic
GAGGGGAGCCAGTATTAAAT+TGG 0.256524 8_1:+31675724 None:intergenic
TTCCCAAAAGATTAAGATCT+TGG 0.276626 8_1:+31679818 None:intergenic
AGAAGACATGTCTATGAGTT+TGG 0.276838 8_1:+31673525 None:intergenic
TTTCTTCAGGTTGATACTAT+AGG 0.283219 8_1:-31675141 Msa1189620:CDS
GTGATAATAATCATCAATAT+AGG 0.291904 8_1:+31675275 None:intergenic
CCACCACTGGCAGAGGAGTT+TGG 0.301095 8_1:+31675063 None:intergenic
AAGAAGAAGGAATGTCCTTT+TGG 0.304468 8_1:-31674884 Msa1189620:CDS
ACCATCCTCAATAGTGATTC+TGG 0.307128 8_1:+31674987 None:intergenic
CTTGTAGAAGATTGCACTTA+AGG 0.308720 8_1:+31674926 None:intergenic
TGATAATAATCATCAATATA+GGG 0.310085 8_1:+31675276 None:intergenic
TGGTTAGCATGTACAGGTTT+AGG 0.324703 8_1:-31673762 Msa1189620:three_prime_UTR
GAGATTTCTTCTGATGATAA+TGG 0.325143 8_1:-31674060 Msa1189620:three_prime_UTR
GTTGAGAGACCCGATGTTTA+CGG 0.327132 8_1:+31675427 None:intergenic
TTCTTCAGGTTGATACTATA+GGG 0.328913 8_1:-31675140 Msa1189620:CDS
CTCCAAGATACAACCCTGTT+TGG 0.338076 8_1:+31675670 None:intergenic
CAAGAATGAAGAAGAAGATT+AGG 0.349735 8_1:+31679915 None:intergenic
CAGCGCTCTTCGCCTGTGGC+TGG 0.350591 8_1:-31674154 Msa1189620:CDS
AACTTAGCCCAATTTAATAC+TGG 0.355465 8_1:-31675732 Msa1189620:CDS
TAAACATCGGGTCTCTCAAC+AGG 0.358638 8_1:-31675424 Msa1189620:CDS
TGAAGCTCTTGTTGCTTGTC+AGG 0.364348 8_1:+31675978 None:intergenic
GTTGCTGAGGAAGTTGAGTT+GGG 0.368924 8_1:-31679110 Msa1189620:CDS
CTCTTGCCCTAGGGGTGCAC+TGG 0.369635 8_1:-31673644 Msa1189620:three_prime_UTR
CTAGTGAACCTGTTCCTAAC+TGG 0.377399 8_1:-31676121 Msa1189620:CDS
TGAGCCACACAGGTTTCTTC+AGG 0.378458 8_1:-31675154 Msa1189620:CDS
CTTGCACGCAAGAGCTCAAC+AGG 0.383233 8_1:+31674226 None:intergenic
CGCTAGGAGCTTCCGTCCCT+TGG 0.384276 8_1:+31674753 None:intergenic
TTGAGAGACCCGATGTTTAC+GGG 0.384740 8_1:+31675428 None:intergenic
GAAGACATGTCTATGAGTTT+GGG 0.391924 8_1:+31673526 None:intergenic
CCCTTTCAGTTATGTATACA+AGG 0.393704 8_1:-31673715 Msa1189620:three_prime_UTR
AGCTCCTAGCGAAGTATCTT+CGG 0.394291 8_1:-31674741 Msa1189620:CDS
TGCAGCTGCCGTTGCTGCTC+AGG 0.395760 8_1:+31676164 None:intergenic
AAAGTTGTTCAATACAGTTC+AGG 0.397294 8_1:-31675374 Msa1189620:CDS
AAGATGGTGATTAAATAAAT+GGG 0.399467 8_1:+31675494 None:intergenic
TGTATACAAGGTGTGAAGGT+TGG 0.407178 8_1:-31673703 Msa1189620:three_prime_UTR
CAGTTGAACATTCCTTATGC+TGG 0.408226 8_1:-31675852 Msa1189620:CDS
TCCTCCATTTCACACATAGA+AGG 0.409307 8_1:-31676032 Msa1189620:CDS
TTCGAAATCAAGGGGAAATT+GGG 0.410379 8_1:-31677077 Msa1189620:CDS
TTTAATCACCATCTTCCGTC+TGG 0.411992 8_1:-31675486 Msa1189620:CDS
CGGTCCTTCTATGTGTGAAA+TGG 0.413888 8_1:+31676028 None:intergenic
GGAATGGATCTTGGTTCTCT+TGG 0.415037 8_1:-31674571 Msa1189620:CDS
CTGGGTTGACGAAGGTTCTC+AGG 0.418294 8_1:-31676270 Msa1189620:CDS
AACCAAACAGGGTTGTATCT+TGG 0.421123 8_1:-31675672 Msa1189620:CDS
TTAACTAGTTCCTATTCCTA+TGG 0.427455 8_1:+31673587 None:intergenic
ACCGCTACCGAACTTCTAAC+TGG 0.428408 8_1:-31674442 Msa1189620:CDS
GTATACAAGGTGTGAAGGTT+GGG 0.433004 8_1:-31673702 Msa1189620:three_prime_UTR
AAGATTAAGATCTTGGTTGT+TGG 0.433495 8_1:+31679825 None:intergenic
CAACAACTATACCATCATAA+TGG 0.434197 8_1:-31675615 Msa1189620:CDS
AATCAATGGATCAACCAAAC+AGG 0.438580 8_1:-31675684 Msa1189620:CDS
AAGAATGAAGAAGAAGATTA+GGG 0.438698 8_1:+31679916 None:intergenic
TTCAGAGAAGTCCCTTGAGC+AGG 0.448069 8_1:-31675025 Msa1189620:CDS
CCAAAATATGAGCCGCATCT+TGG 0.448655 8_1:-31675759 Msa1189620:CDS
GCTTCACAATATGCATTCTT+CGG 0.452345 8_1:-31679140 Msa1189620:CDS
TGATCAAACCAGTTAGGAAC+AGG 0.452768 8_1:+31676113 None:intergenic
AAGCCAGCTGACGCTTGAAC+AGG 0.455440 8_1:+31675534 None:intergenic
GGGAAACATGTTGACCAGTT+TGG 0.456661 8_1:-31673623 Msa1189620:three_prime_UTR
ATTCAATTCTGCGTCACACT+TGG 0.457252 8_1:-31675787 Msa1189620:CDS
CAGCATAAGGAATGTTCAAC+TGG 0.458036 8_1:+31675853 None:intergenic
TGTGTCCATTCTTTCCTAGC+GGG 0.459607 8_1:+31674830 None:intergenic
CAGATTCCTCTGCTTCTGAA+TGG 0.459616 8_1:-31676316 Msa1189620:CDS
TGCTGCTAAAGTAGTTAGTA+AGG 0.462439 8_1:-31674254 Msa1189620:CDS
TATCTTCGGTTGCTTGATCC+TGG 0.463629 8_1:-31674727 Msa1189620:CDS
TTGAGAACCAGTTAGAAGTT+CGG 0.463987 8_1:+31674435 None:intergenic
CTCGGAAGTCCTGCTGGAGA+TGG 0.466408 8_1:-31674496 Msa1189620:CDS
GCTGGATTTAACAGCTATGC+TGG 0.469530 8_1:-31674136 Msa1189620:CDS
AGAAGATTAGGGTAAATTGC+TGG 0.472238 8_1:+31679927 None:intergenic
TGCTGCTGTTGCTGCAACTG+AGG 0.472389 8_1:+31675570 None:intergenic
AGTTGAACATTCCTTATGCT+GGG 0.475705 8_1:-31675851 Msa1189620:CDS
GAACAAAATGTGGCTGCGAT+TGG 0.476470 8_1:-31674283 Msa1189620:CDS
AGAGGGATGATGTTCCCTAC+TGG 0.478742 8_1:-31676289 Msa1189620:CDS
TATCCTGTTCAAGCGTCAGC+TGG 0.480209 8_1:-31675537 Msa1189620:CDS
GCGTCAGCTGGCTTAATGTC+AGG 0.483312 8_1:-31675525 Msa1189620:CDS
TGGTGCTTGTCTTGCAGCAG+TGG 0.485257 8_1:-31674551 Msa1189620:CDS
AAATCTAATGATGATGATGA+TGG 0.489565 8_1:-31673671 Msa1189620:three_prime_UTR
ATAATCGAATCCAGAATCAA+TGG 0.492251 8_1:-31675698 Msa1189620:CDS
AAAATCAACCCGTAAACATC+GGG 0.492540 8_1:-31675436 Msa1189620:CDS
CACTAGTGGTTAGCATGTAC+AGG 0.493076 8_1:-31673768 Msa1189620:three_prime_UTR
CGAACAATGGCTCCTGCTCA+AGG 0.493113 8_1:+31675013 None:intergenic
GTATTTCAGCCCCACCAAAC+TGG 0.494004 8_1:+31673609 None:intergenic
CTCAGAGCCACCACTGGCAG+AGG 0.494329 8_1:+31675056 None:intergenic
CACTAGAGCGATGTTGGAGT+TGG 0.494465 8_1:+31676138 None:intergenic
CAGGTTCACTAGAGCGATGT+TGG 0.494487 8_1:+31676132 None:intergenic
GGCTGAAATACCATAGGAAT+AGG 0.495436 8_1:-31673597 Msa1189620:three_prime_UTR
CTGCCGTTGCTGCTCAGGAT+AGG 0.495545 8_1:+31676169 None:intergenic
TATTGCAGACGGATGATGTA+AGG 0.505522 8_1:-31678470 Msa1189620:intron
TGTATCGAAGGAATGGATCT+TGG 0.508446 8_1:-31674580 Msa1189620:CDS
CTCTGCTGCTGCTGAATCAG+AGG 0.508948 8_1:+31674636 None:intergenic
AACTGTTGATCAAACCAGTT+AGG 0.511367 8_1:+31676107 None:intergenic
ACGACTAGCATCTATTTCCA+AGG 0.513088 8_1:-31674770 Msa1189620:CDS
TGGATGATCCAGACGGAAGA+TGG 0.513797 8_1:+31675478 None:intergenic
TGTTGCTGAGGAAGTTGAGT+TGG 0.514762 8_1:-31679111 Msa1189620:CDS
TAAGAAGTAAATGAAGACTT+TGG 0.515235 8_1:+31675927 None:intergenic
AAATATGAGCCGCATCTTGG+TGG 0.515281 8_1:-31675756 Msa1189620:CDS
TAAGAAGACAAGGTCATCCT+TGG 0.516956 8_1:+31674792 None:intergenic
AGGGGAGCCAGTATTAAATT+GGG 0.517070 8_1:+31675725 None:intergenic
GCTGCAACATATTATTCAGA+AGG 0.518499 8_1:+31675637 None:intergenic
TTGTCTATTCTCTCTAACGA+TGG 0.519497 8_1:+31675458 None:intergenic
CACTCAGCGCTCTTCGCCTG+TGG 0.520002 8_1:-31674158 Msa1189620:CDS
TTCAATTCTGCGTCACACTT+GGG 0.523618 8_1:-31675786 Msa1189620:CDS
CTAGTAATAACTTTCTCTGC+CGG 0.526180 8_1:+31674185 None:intergenic
TTGCTGAGGAAGTTGAGTTG+GGG 0.526810 8_1:-31679109 Msa1189620:CDS
AAACATGTTGACCAGTTTGG+TGG 0.527169 8_1:-31673620 Msa1189620:three_prime_UTR
TGATGGGCAACTCTTGCCCT+AGG 0.528067 8_1:-31673654 Msa1189620:three_prime_UTR
TAACTTTCTCTGCCGGTCGT+TGG 0.528752 8_1:+31674192 None:intergenic
GATGGGCAACTCTTGCCCTA+GGG 0.528924 8_1:-31673653 Msa1189620:three_prime_UTR
CCAAACTCCTCTGCCAGTGG+TGG 0.529316 8_1:-31675063 Msa1189620:CDS
GCTGAGGAAGTTGAGTTGGG+GGG 0.530219 8_1:-31679107 Msa1189620:CDS
TCTTGCCCTAGGGGTGCACT+GGG 0.531142 8_1:-31673643 Msa1189620:three_prime_UTR
GAGGGATGATGTTCCCTACT+GGG 0.533048 8_1:-31676288 Msa1189620:CDS
TCTGGATTCGATTATTGAGA+GGG 0.533592 8_1:+31675706 None:intergenic
CCAGAGTATCATGCAGTCAC+TGG 0.534028 8_1:-31674317 Msa1189620:CDS
CCTTGTATACATAACTGAAA+GGG 0.534156 8_1:+31673715 None:intergenic
AACATGTTGACCAGTTTGGT+GGG 0.534620 8_1:-31673619 Msa1189620:three_prime_UTR
AGAGGGCGAGGCTGACGAAT+GGG 0.534806 8_1:+31675102 None:intergenic
GGAAAGAATGGACACAAAGC+TGG 0.534908 8_1:-31674823 Msa1189620:CDS
AAACCTGTGTGGCTCAGTAT+TGG 0.535430 8_1:+31675161 None:intergenic
GTGGACCCGCTAGGAAAGAA+TGG 0.535796 8_1:-31674835 Msa1189620:CDS
CTCTGCCGGTCGTTGGTGTG+AGG 0.535838 8_1:+31674199 None:intergenic
TTGTCAGTGTATCGAAGGAA+TGG 0.536739 8_1:-31674587 Msa1189620:CDS
AAACACGTCCATCCATAAAA+GGG 0.539324 8_1:+31679879 None:intergenic
GAACTCAATTCACAAGAAGA+AGG 0.539787 8_1:-31674897 Msa1189620:CDS
CCAGTGACTGCATGATACTC+TGG 0.541700 8_1:+31674317 None:intergenic
TATTCATGCAATACTTTGTG+AGG 0.544965 8_1:+31674344 None:intergenic
GTCTTCCTCACACCAACGAC+CGG 0.545146 8_1:-31674204 Msa1189620:CDS
ATGTTTCCCAGTGCACCCCT+AGG 0.555730 8_1:+31673637 None:intergenic
TGTGTCTACGAAAAGTCTCA+TGG 0.555839 8_1:+31673789 None:intergenic
AAGTGCAATCTTCTACAAGA+TGG 0.555960 8_1:-31674922 Msa1189620:CDS
AAGAGGGCGAGGCTGACGAA+TGG 0.556679 8_1:+31675101 None:intergenic
CTTCATCTCGTGGACCCGCT+AGG 0.557773 8_1:-31674844 Msa1189620:CDS
ATCCGCACAAGCTCACTACC+AGG 0.557985 8_1:+31674709 None:intergenic
CATCTCCAGCAGGACTTCCG+AGG 0.559113 8_1:+31674497 None:intergenic
CCTCCAAACTCCTCTGCCAG+TGG 0.560112 8_1:-31675066 Msa1189620:CDS
GTGTGGCTCAGTATTGGCAC+GGG 0.560334 8_1:+31675167 None:intergenic
CGCAGCCAGAATCACTATTG+AGG 0.560701 8_1:-31674992 Msa1189620:CDS
TCTTCTCCAAATTACAGTAC+AGG 0.561121 8_1:-31675876 Msa1189620:CDS
CTTCCTATCCTGAGCAGCAA+CGG 0.561363 8_1:-31676172 Msa1189620:CDS
ATAGGAAGATGTTCTGTACA+AGG 0.562178 8_1:+31676187 None:intergenic
ATCTCCAGCAGGACTTCCGA+GGG 0.562988 8_1:+31674498 None:intergenic
AATTCTGCGTCACACTTGGG+TGG 0.563960 8_1:-31675783 Msa1189620:CDS
CAAATGCCAACACATTCTCA+TGG 0.563991 8_1:+31673918 None:intergenic
ATGCAGTCACTGGTTATACA+AGG 0.564011 8_1:-31674307 Msa1189620:CDS
ACCTTGTATACATAACTGAA+AGG 0.568400 8_1:+31673714 None:intergenic
ACCAGTTAGAAGTTCGGTAG+CGG 0.568400 8_1:+31674441 None:intergenic
GATAATAATCATCAATATAG+GGG 0.569599 8_1:+31675277 None:intergenic
GTGAAACTGTTGATGATGAC+AGG 0.569903 8_1:-31676076 Msa1189620:CDS
TGTGTGGCTCAGTATTGGCA+CGG 0.570357 8_1:+31675166 None:intergenic
GACTGCCAGTGATCTTGCTA+TGG 0.571406 8_1:-31674614 Msa1189620:CDS
GCTTGTGCGGATTGTCTGCA+TGG 0.572543 8_1:-31674698 Msa1189620:CDS
TAGTAATAGTCATGTGAACT+CGG 0.573104 8_1:-31674107 Msa1189620:CDS
TGCTTCTGAATGGTCACAGA+GGG 0.573238 8_1:-31676306 Msa1189620:CDS
GTTGTTTGTCAGTGTATCGA+AGG 0.578563 8_1:-31674592 Msa1189620:CDS
TCAGCTTCAAGAAGAGGGCG+AGG 0.578977 8_1:+31675090 None:intergenic
TTCTGGATTCGATTATTGAG+AGG 0.579609 8_1:+31675705 None:intergenic
ATGTTGCTAGTCCTTCCAAA+AGG 0.580287 8_1:+31674869 None:intergenic
GGAGGATCAGCTTCAAGAAG+AGG 0.581213 8_1:+31675084 None:intergenic
ATGGGCAACTCTTGCCCTAG+GGG 0.581734 8_1:-31673652 Msa1189620:three_prime_UTR
TAACTGAAAGGGAACATCAT+GGG 0.582373 8_1:+31673726 None:intergenic
CGAGAACAGATACTAAAACA+AGG 0.582603 8_1:+31674467 None:intergenic
TCCTTCTATGTGTGAAATGG+AGG 0.583208 8_1:+31676031 None:intergenic
GTTATGTATACAAGGTGTGA+AGG 0.583812 8_1:-31673707 Msa1189620:three_prime_UTR
AATTTAAATTTAGCCCCAGA+AGG 0.584122 8_1:+31675231 None:intergenic
CTGGATTTAACAGCTATGCT+GGG 0.584302 8_1:-31674135 Msa1189620:CDS
AGAACCTTCGTCAACCCAGT+AGG 0.585118 8_1:+31676274 None:intergenic
TATGAAGATGTTCTATGCAA+GGG 0.586515 8_1:+31676002 None:intergenic
TGCTGAGGAAGTTGAGTTGG+GGG 0.588956 8_1:-31679108 Msa1189620:CDS
TCCTCGTTGAACGTAACAGA+AGG 0.588971 8_1:+31679059 None:intergenic
TATACAAGGGGAACAAAATG+TGG 0.589541 8_1:-31674293 Msa1189620:CDS
GTGATTCTGGCTGCGAACAA+TGG 0.590298 8_1:+31675000 None:intergenic
GAGGATCAGCTTCAAGAAGA+GGG 0.592242 8_1:+31675085 None:intergenic
ATAACTGAAAGGGAACATCA+TGG 0.592260 8_1:+31673725 None:intergenic
AACAACCATAGCAAGATCAC+TGG 0.593312 8_1:+31674609 None:intergenic
AATTCGCTCAGAGCCACCAC+TGG 0.594495 8_1:+31675050 None:intergenic
GATGTTCTATGCAAGGGCAT+CGG 0.595079 8_1:+31676008 None:intergenic
GAACCTTCGTCAACCCAGTA+GGG 0.595113 8_1:+31676275 None:intergenic
ATATGAAGATGTTCTATGCA+AGG 0.596969 8_1:+31676001 None:intergenic
TTGAACATTCCTTATGCTGG+GGG 0.597694 8_1:-31675849 Msa1189620:CDS
TCTGCTGCTGCTGAATCAGA+GGG 0.597695 8_1:+31674637 None:intergenic
GAGACACTGATCCATTATGA+TGG 0.598684 8_1:+31675604 None:intergenic
GAACAATGGCTCCTGCTCAA+GGG 0.600139 8_1:+31675014 None:intergenic
GCCAGAATCACTATTGAGGA+TGG 0.600876 8_1:-31674988 Msa1189620:CDS
TGTTTCCCAGTGCACCCCTA+GGG 0.601622 8_1:+31673638 None:intergenic
CTCCAGCAGGACTTCCGAGG+GGG 0.602256 8_1:+31674500 None:intergenic
GAGAACAGATACTAAAACAA+GGG 0.602558 8_1:+31674468 None:intergenic
AGCAACATCACTTCATCTCG+TGG 0.604594 8_1:-31674854 Msa1189620:CDS
CGACTAGCATCTATTTCCAA+GGG 0.604906 8_1:-31674769 Msa1189620:CDS
TTCTGTTACGTTCAACGAGG+AGG 0.605235 8_1:-31679057 Msa1189620:CDS
TTTGGGTCTTCGAAATCAAG+GGG 0.606403 8_1:-31677085 Msa1189620:CDS
AGGGAAGCACCATCTCCAGC+AGG 0.606600 8_1:+31674487 None:intergenic
TGCAATCTTCTACAAGATGG+TGG 0.606608 8_1:-31674919 Msa1189620:CDS
CAAAGCTGGTCTTACTGCCA+AGG 0.607057 8_1:-31674809 Msa1189620:CDS
TAGCTGTTAAATCCAGCCAC+AGG 0.608075 8_1:+31674142 None:intergenic
CTGTGACCATTCAGAAGCAG+AGG 0.609822 8_1:+31676310 None:intergenic
AACAGAAGAATGTGGATGTG+AGG 0.610554 8_1:+31676232 None:intergenic
TGGTGGGGCTGAAATACCAT+AGG 0.610626 8_1:-31673603 Msa1189620:three_prime_UTR
GTTGAACATTCCTTATGCTG+GGG 0.612073 8_1:-31675850 Msa1189620:CDS
GCGCAGAGGAGGAGGCTCTG+AGG 0.612695 8_1:+31674522 None:intergenic
TGCAACTGAGGCAGTAAGTG+AGG 0.614026 8_1:+31675582 None:intergenic
ATCCTGGTAGTGAGCTTGTG+CGG 0.616887 8_1:-31674711 Msa1189620:CDS
GAAAATGCAAGTTGCATCTG+TGG 0.617670 8_1:-31673958 Msa1189620:three_prime_UTR
TTGTGTCCATTCTTTCCTAG+CGG 0.620857 8_1:+31674829 None:intergenic
TGCAGTCACTGGTTATACAA+GGG 0.621051 8_1:-31674306 Msa1189620:CDS
ATGTGTGAAATGGAGGAATG+TGG 0.622182 8_1:+31676038 None:intergenic
AATCTAATGATGATGATGAT+GGG 0.622933 8_1:-31673670 Msa1189620:three_prime_UTR
CTGGATTCGATTATTGAGAG+GGG 0.625199 8_1:+31675707 None:intergenic
CCACTGGCAGAGGAGTTTGG+AGG 0.626147 8_1:+31675066 None:intergenic
CTGTTGATGATGACAGGAGA+TGG 0.626700 8_1:-31676070 Msa1189620:CDS
CTTCGGTAAAGATGTTGCTG+AGG 0.629875 8_1:-31679123 Msa1189620:CDS
GTTCCCTACTGGGTTGACGA+AGG 0.630649 8_1:-31676278 Msa1189620:CDS
GCAGTCACTGGTTATACAAG+GGG 0.630832 8_1:-31674305 Msa1189620:CDS
ACATGTTGACCAGTTTGGTG+GGG 0.631058 8_1:-31673618 Msa1189620:three_prime_UTR
TAGCATCTATTTCCAAGGGA+CGG 0.631807 8_1:-31674765 Msa1189620:CDS
TTCAGGTTGATACTATAGGG+AGG 0.634635 8_1:-31675137 Msa1189620:CDS
AAACATCGGGTCTCTCAACA+GGG 0.634864 8_1:-31675423 Msa1189620:CDS
GCAACCGAAGATACTTCGCT+AGG 0.636428 8_1:+31674737 None:intergenic
TAAATAAAATAAAAGACATG+AGG 0.637578 8_1:+31673838 None:intergenic
GTTGACGAAGGTTCTCAGGA+TGG 0.639257 8_1:-31676266 Msa1189620:CDS
ATCAATGGATCAACCAAACA+GGG 0.642698 8_1:-31675683 Msa1189620:CDS
ATGCTAGTCGTAAGAAGACA+AGG 0.646716 8_1:+31674782 None:intergenic
GCTAAGTTTCCACCAAGATG+CGG 0.646884 8_1:+31675747 None:intergenic
AATGTACTTGAACAGATGCA+AGG 0.647061 8_1:+31674000 None:intergenic
TTGAACAGATGCAAGGTAAG+CGG 0.647392 8_1:+31674007 None:intergenic
AGATGGTGATTAAATAAATG+GGG 0.649809 8_1:+31675495 None:intergenic
TAGGAAGATGTTCTGTACAA+GGG 0.654837 8_1:+31676188 None:intergenic
AATGCAAGTTGCATCTGTGG+CGG 0.658591 8_1:-31673955 Msa1189620:three_prime_UTR
ATGATTCCATGAGAATGTGT+TGG 0.665587 8_1:-31673924 Msa1189620:three_prime_UTR
CCTCGTTGAACGTAACAGAA+GGG 0.666944 8_1:+31679060 None:intergenic
CTAACGATGGATGATCCAGA+CGG 0.670278 8_1:+31675471 None:intergenic
GTGCCAATACTGAGCCACAC+AGG 0.671643 8_1:-31675164 Msa1189620:CDS
GTTCTCAGGATGGCAAACGA+TGG 0.677888 8_1:-31676256 Msa1189620:CDS
CCCTTCTGTTACGTTCAACG+AGG 0.684228 8_1:-31679060 Msa1189620:CDS
ATATGAGCAACAGAAGAATG+TGG 0.697566 8_1:+31676224 None:intergenic
CTGCTTCTGAATGGTCACAG+AGG 0.709939 8_1:-31676307 Msa1189620:CDS
TCTCCAGCAGGACTTCCGAG+GGG 0.719904 8_1:+31674499 None:intergenic
CTGCTGCTGCTGAATCAGAG+GGG 0.723332 8_1:+31674638 None:intergenic
GATCAATATCATCTACATCG+AGG 0.731586 8_1:+31674953 None:intergenic
TCAACCTGAAGAAACCTGTG+TGG 0.743908 8_1:+31675150 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAAAGTATGAATTTTTA+GGG + chr8_1:31676295-31676314 None:intergenic 10.0%
!!! TTTTTGTAGTTTTTACTTTA+TGG - chr8_1:31673742-31673761 Msa1189620:three_prime_UTR 15.0%
!!! TTTTGTAGTTTTTACTTTAT+GGG - chr8_1:31673743-31673762 Msa1189620:three_prime_UTR 15.0%
!! TGAAATTAGAAAAAAAAATG+CGG + chr8_1:31674509-31674528 None:intergenic 15.0%
!!! TTCTAATTTCAAATTTTATG+TGG - chr8_1:31674518-31674537 Msa1189620:CDS 15.0%
!!! AAAAGTCAGATAAAATATTT+TGG + chr8_1:31674817-31674836 None:intergenic 15.0%
!!! ATTTATTTTTTAATCTGGAT+TGG - chr8_1:31675179-31675198 Msa1189620:CDS 15.0%
!!! TTTATTTTTTAATCTGGATT+GGG - chr8_1:31675180-31675199 Msa1189620:CDS 15.0%
!!! ATTAACAATGAATTTTAAGT+AGG + chr8_1:31676239-31676258 None:intergenic 15.0%
!!! GTTATAAAGTATGAATTTTT+AGG + chr8_1:31676296-31676315 None:intergenic 15.0%
!!! AAATTCTTAATATGTCATTT+TGG - chr8_1:31676393-31676412 Msa1189620:intron 15.0%
!!! AATTCTTAATATGTCATTTT+GGG - chr8_1:31676394-31676413 Msa1189620:intron 15.0%
!! AAAAAAAACTCGATAAATAA+TGG + chr8_1:31676534-31676553 None:intergenic 15.0%
!!! TATCGAGTTTTTTTTTTTTT+TGG - chr8_1:31676539-31676558 Msa1189620:intron 15.0%
!!! ATCGAGTTTTTTTTTTTTTT+GGG - chr8_1:31676540-31676559 Msa1189620:intron 15.0%
!!! TAATTTGTTAGATAACATTT+TGG - chr8_1:31676990-31677009 Msa1189620:intron 15.0%
!! TGATAATAATCATCAATATA+GGG + chr8_1:31678223-31678242 None:intergenic 15.0%
!! TAAATAAAATAAAAGACATG+AGG + chr8_1:31679661-31679680 None:intergenic 15.0%
!!! TTTGTAGTTTTTACTTTATG+GGG - chr8_1:31673744-31673763 Msa1189620:three_prime_UTR 20.0%
!!! CATTATTTTTCTTGACTTAT+TGG - chr8_1:31674244-31674263 Msa1189620:CDS 20.0%
!! TAAAATGAAGAAAACATACA+CGG + chr8_1:31674593-31674612 None:intergenic 20.0%
!! TTAATGATAGATTAGTATGT+TGG - chr8_1:31675151-31675170 Msa1189620:CDS 20.0%
!!! TACTTTTTTTAGTTAAGTGA+AGG + chr8_1:31675209-31675228 None:intergenic 20.0%
!! TTAATATAAAGAATACGCTA+TGG + chr8_1:31675236-31675255 None:intergenic 20.0%
!! AAATAGATAGGATAGAAATA+AGG - chr8_1:31675262-31675281 Msa1189620:CDS 20.0%
!! ATTAAAGTAAAGGGAAATAA+GGG + chr8_1:31675828-31675847 None:intergenic 20.0%
!! TTAATAAAATCACAAGAATC+TGG + chr8_1:31676468-31676487 None:intergenic 20.0%
!! TCTAAGTGAAATTTGTATTT+AGG - chr8_1:31677036-31677055 Msa1189620:intron 20.0%
!! AAGATGGTGATTAAATAAAT+GGG + chr8_1:31678005-31678024 None:intergenic 20.0%
!! GATAATAATCATCAATATAG+GGG + chr8_1:31678222-31678241 None:intergenic 20.0%
!! GTGATAATAATCATCAATAT+AGG + chr8_1:31678224-31678243 None:intergenic 20.0%
!!! CGTCATTTAAGATTTTTATT+CGG - chr8_1:31678829-31678848 Msa1189620:intron 20.0%
!!! TTGTGATATATTTTACTTTC+AGG - chr8_1:31679598-31679617 Msa1189620:intron 20.0%
!!! GTCTTTTATTTTATTTACGA+CGG - chr8_1:31679664-31679683 Msa1189620:intron 20.0%
!!! TCTTTTATTTTATTTACGAC+GGG - chr8_1:31679665-31679684 Msa1189620:intron 20.0%
! AAGAATGAAGAAGAAGATTA+GGG + chr8_1:31673583-31673602 None:intergenic 25.0%
!! AACCAAGATCTTAATCTTTT+GGG - chr8_1:31673676-31673695 Msa1189620:three_prime_UTR 25.0%
!!! TTGTTGTTTGTTGTTTGATT+AGG - chr8_1:31673823-31673842 Msa1189620:three_prime_UTR 25.0%
!!! TGTTGTTTGTTGTTTGATTA+GGG - chr8_1:31673824-31673843 Msa1189620:three_prime_UTR 25.0%
!!! TTTTGATTATTGTTCTTGCA+TGG - chr8_1:31673885-31673904 Msa1189620:three_prime_UTR 25.0%
! TATAGATGTTACTGCATTAT+AGG - chr8_1:31674006-31674025 Msa1189620:three_prime_UTR 25.0%
! ATAGATGTTACTGCATTATA+GGG - chr8_1:31674007-31674026 Msa1189620:three_prime_UTR 25.0%
!! TTACTATGAAACAGTGATTT+TGG - chr8_1:31674048-31674067 Msa1189620:three_prime_UTR 25.0%
!! AACAGTGATTTTGGATTAAT+AGG - chr8_1:31674057-31674076 Msa1189620:three_prime_UTR 25.0%
!! ACAGTGATTTTGGATTAATA+GGG - chr8_1:31674058-31674077 Msa1189620:three_prime_UTR 25.0%
! ACAATAACTACTGCAAATTA+TGG + chr8_1:31674792-31674811 None:intergenic 25.0%
! ATATAGAACTAACAGTTAGA+TGG + chr8_1:31675009-31675028 None:intergenic 25.0%
!! TTAGTGTTTTCTCAAAATTC+TGG - chr8_1:31675114-31675133 Msa1189620:CDS 25.0%
!!! TGTTTAGATATCTGTTTTAG+AGG + chr8_1:31675312-31675331 None:intergenic 25.0%
! ATCAATCAACAGTAAGTTAT+TGG + chr8_1:31675466-31675485 None:intergenic 25.0%
!! TAACTTACTGTTGATTGATA+AGG - chr8_1:31675467-31675486 Msa1189620:CDS 25.0%
!! AACTTACTGTTGATTGATAA+GGG - chr8_1:31675468-31675487 Msa1189620:CDS 25.0%
!! AAACAGAATATAACGTTTTC+TGG + chr8_1:31675598-31675617 None:intergenic 25.0%
! CATTAAAGTAAAGGGAAATA+AGG + chr8_1:31675829-31675848 None:intergenic 25.0%
!! AGTAGGTTTTCAGAAAATAA+TGG + chr8_1:31676222-31676241 None:intergenic 25.0%
! AAAAAAATAATCTGTAGTCG+TGG - chr8_1:31676495-31676514 Msa1189620:intron 25.0%
!!! AGTTTTAATGGTTTTACAAG+TGG - chr8_1:31676704-31676723 Msa1189620:intron 25.0%
!! TTTTAGTAACCACGATAATA+TGG - chr8_1:31676806-31676825 Msa1189620:intron 25.0%
! AACCATAATAATATTTCGTC+TGG - chr8_1:31676853-31676872 Msa1189620:intron 25.0%
! ACCATAATAATATTTCGTCT+GGG - chr8_1:31676854-31676873 Msa1189620:intron 25.0%
!!! TTTTTTGAGTGAACCAATTT+TGG - chr8_1:31677544-31677563 Msa1189620:intron 25.0%
! TAAGAAGTAAATGAAGACTT+TGG + chr8_1:31677572-31677591 None:intergenic 25.0%
! AGATGGTGATTAAATAAATG+GGG + chr8_1:31678004-31678023 None:intergenic 25.0%
! GAAGATGGTGATTAAATAAA+TGG + chr8_1:31678006-31678025 None:intergenic 25.0%
!!! TTCTGATGATAATGGTTTTT+TGG - chr8_1:31679444-31679463 Msa1189620:intron 25.0%
!!! TCTGATGATAATGGTTTTTT+GGG - chr8_1:31679445-31679464 Msa1189620:intron 25.0%
!!! CTTTTATTTTATTTACGACG+GGG - chr8_1:31679666-31679685 Msa1189620:intron 25.0%
!!! TTTTATTTTATTTACGACGG+GGG - chr8_1:31679667-31679686 Msa1189620:intron 25.0%
!! AAATCTAATGATGATGATGA+TGG - chr8_1:31679825-31679844 Msa1189620:CDS 25.0%
!! AATCTAATGATGATGATGAT+GGG - chr8_1:31679826-31679845 Msa1189620:CDS 25.0%
CAAGAATGAAGAAGAAGATT+AGG + chr8_1:31673584-31673603 None:intergenic 30.0%
! GTTTTTCTGTTACCCTTTTA+TGG - chr8_1:31673605-31673624 Msa1189620:three_prime_UTR 30.0%
AAGATTAAGATCTTGGTTGT+TGG + chr8_1:31673674-31673693 None:intergenic 30.0%
! CAACCAAGATCTTAATCTTT+TGG - chr8_1:31673675-31673694 Msa1189620:three_prime_UTR 30.0%
TTCCCAAAAGATTAAGATCT+TGG + chr8_1:31673681-31673700 None:intergenic 30.0%
!! CTTTTGGGAAATCTTACTAA+AGG - chr8_1:31673691-31673710 Msa1189620:three_prime_UTR 30.0%
TCAAATTATCATCTATGTCG+AGG - chr8_1:31674162-31674181 Msa1189620:CDS 30.0%
! GTTTTCTATTGTTATGCAGA+TGG - chr8_1:31674320-31674339 Msa1189620:CDS 30.0%
!!! GTTTTTTCACAATGAAGAAG+AGG - chr8_1:31674463-31674482 Msa1189620:CDS 30.0%
TGCTTTGGCAAAATTATGAA+CGG + chr8_1:31674687-31674706 None:intergenic 30.0%
!! ATGCTTTGGAAATATGCTTT+GGG + chr8_1:31674759-31674778 None:intergenic 30.0%
!! AATGCTTTGGAAATATGCTT+TGG + chr8_1:31674760-31674779 None:intergenic 30.0%
AAAGCATATTTCCAAAGCAT+TGG - chr8_1:31674759-31674778 Msa1189620:CDS 30.0%
ATGTTGAAAATTCACATCGA+TGG + chr8_1:31674848-31674867 None:intergenic 30.0%
!! TGTTAGTTCTATATTGCAGA+CGG - chr8_1:31675015-31675034 Msa1189620:CDS 30.0%
TAGAAATAAGGTACAGTTAG+TGG - chr8_1:31675274-31675293 Msa1189620:CDS 30.0%
TTTAAATGCAGTTTCGATAG+TGG - chr8_1:31675394-31675413 Msa1189620:CDS 30.0%
AGTGGTAATCTTGATTGATA+AGG - chr8_1:31675412-31675431 Msa1189620:CDS 30.0%
TTCCAGGACATTAAAGTAAA+GGG + chr8_1:31675837-31675856 None:intergenic 30.0%
TTTCCAGGACATTAAAGTAA+AGG + chr8_1:31675838-31675857 None:intergenic 30.0%
AAAATGTGCTAATTGTTTCC+AGG + chr8_1:31675853-31675872 None:intergenic 30.0%
CAGTTGAACAAAATTGTTAG+TGG - chr8_1:31675942-31675961 Msa1189620:CDS 30.0%
!! ATTACATTTTTCAGCACTTG+AGG - chr8_1:31676098-31676117 Msa1189620:CDS 30.0%
TAATGTGTTAAACGCTACTT+TGG - chr8_1:31676138-31676157 Msa1189620:CDS 30.0%
! AATGTGTTAAACGCTACTTT+GGG - chr8_1:31676139-31676158 Msa1189620:CDS 30.0%
AATCACAAGAATCTGGTAAT+TGG + chr8_1:31676461-31676480 None:intergenic 30.0%
!!! AAGCTAGCTTGTAGTTTTAA+TGG - chr8_1:31676692-31676711 Msa1189620:intron 30.0%
ATTTCTCTGACTCTTTCTTT+CGG + chr8_1:31676744-31676763 None:intergenic 30.0%
!! AAAACTTGTTGAAATCACTG+AGG + chr8_1:31676778-31676797 None:intergenic 30.0%
!! GATTTCAACAAGTTTTGTCT+TGG - chr8_1:31676782-31676801 Msa1189620:intron 30.0%
TCCCAGACGAAATATTATTA+TGG + chr8_1:31676858-31676877 None:intergenic 30.0%
TTATGAATGACCACAAAACA+AGG + chr8_1:31676886-31676905 None:intergenic 30.0%
!! TTGTTTTGTGGTCATTCATA+AGG - chr8_1:31676885-31676904 Msa1189620:intron 30.0%
AAATTATCCATTAACCTGAC+TGG + chr8_1:31676976-31676995 None:intergenic 30.0%
! TTTATATCCCCTTTTATGCA+TGG - chr8_1:31677071-31677090 Msa1189620:intron 30.0%
TATGAAGATGTTCTATGCAA+GGG + chr8_1:31677497-31677516 None:intergenic 30.0%
ATATGAAGATGTTCTATGCA+AGG + chr8_1:31677498-31677517 None:intergenic 30.0%
AACTTAGCCCAATTTAATAC+TGG - chr8_1:31677764-31677783 Msa1189620:intron 30.0%
ATAATCGAATCCAGAATCAA+TGG - chr8_1:31677798-31677817 Msa1189620:intron 30.0%
CAACAACTATACCATCATAA+TGG - chr8_1:31677881-31677900 Msa1189620:intron 30.0%
AAAAATCAACCCGTAAACAT+CGG - chr8_1:31678059-31678078 Msa1189620:intron 30.0%
AAAGTTGTTCAATACAGTTC+AGG - chr8_1:31678122-31678141 Msa1189620:intron 30.0%
AATTTAAATTTAGCCCCAGA+AGG + chr8_1:31678268-31678287 None:intergenic 30.0%
!!! AAAGATCCTTCATTTTGGTT+GGG + chr8_1:31678300-31678319 None:intergenic 30.0%
! TGAAGAAAGATCCTTCATTT+TGG + chr8_1:31678305-31678324 None:intergenic 30.0%
!! TTTCTTCAGGTTGATACTAT+AGG - chr8_1:31678355-31678374 Msa1189620:intron 30.0%
!! TTCTTCAGGTTGATACTATA+GGG - chr8_1:31678356-31678375 Msa1189620:intron 30.0%
GAGAACAGATACTAAAACAA+GGG + chr8_1:31679031-31679050 None:intergenic 30.0%
! AATTGGGAAATCGTTCATTT+TGG - chr8_1:31679100-31679119 Msa1189620:CDS 30.0%
TATTCATGCAATACTTTGTG+AGG + chr8_1:31679155-31679174 None:intergenic 30.0%
TAGTAATAGTCATGTGAACT+CGG - chr8_1:31679389-31679408 Msa1189620:intron 30.0%
GAGATTTCTTCTGATGATAA+TGG - chr8_1:31679436-31679455 Msa1189620:intron 30.0%
!! ATTTTGTAGCAGTCTAAAAC+TGG - chr8_1:31679516-31679535 Msa1189620:intron 30.0%
!!! TTTATTTTATTTACGACGGG+GGG - chr8_1:31679668-31679687 Msa1189620:intron 30.0%
CCTTGTATACATAACTGAAA+GGG + chr8_1:31679784-31679803 None:intergenic 30.0%
ACCTTGTATACATAACTGAA+AGG + chr8_1:31679785-31679804 None:intergenic 30.0%
TTAACTAGTTCCTATTCCTA+TGG + chr8_1:31679912-31679931 None:intergenic 30.0%
AGAAGATTAGGGTAAATTGC+TGG + chr8_1:31673572-31673591 None:intergenic 35.0%
! TTCTGTTACCCTTTTATGGA+TGG - chr8_1:31673609-31673628 Msa1189620:three_prime_UTR 35.0%
AAACACGTCCATCCATAAAA+GGG + chr8_1:31673620-31673639 None:intergenic 35.0%
TAAACACGTCCATCCATAAA+AGG + chr8_1:31673621-31673640 None:intergenic 35.0%
TTCGATGTAATCACATGTCT+CGG + chr8_1:31674129-31674148 None:intergenic 35.0%
GCTTCACAATATGCATTCTT+CGG - chr8_1:31674356-31674375 Msa1189620:CDS 35.0%
! ACTAACATGCATTGATGCTT+TGG + chr8_1:31674702-31674721 None:intergenic 35.0%
ATGGATACAATCCAATGCTT+TGG + chr8_1:31674773-31674792 None:intergenic 35.0%
AAATAAGGTACAGTTAGTGG+AGG - chr8_1:31675277-31675296 Msa1189620:CDS 35.0%
CCAAATTTACTAACCAACTC+CGG - chr8_1:31675559-31675578 Msa1189620:CDS 35.0%
TTCCCTTTACTTTAATGTCC+TGG - chr8_1:31675832-31675851 Msa1189620:CDS 35.0%
! ATGTGTTAAACGCTACTTTG+GGG - chr8_1:31676140-31676159 Msa1189620:CDS 35.0%
!! ATTTTGGGTCTTCGAAATCA+AGG - chr8_1:31676409-31676428 Msa1189620:intron 35.0%
!! TTTTGGGTCTTCGAAATCAA+GGG - chr8_1:31676410-31676429 Msa1189620:intron 35.0%
TTCGAAATCAAGGGGAAATT+GGG - chr8_1:31676419-31676438 Msa1189620:intron 35.0%
CACTTGTAAAGATACGTGTT+TGG + chr8_1:31676649-31676668 None:intergenic 35.0%
CAAACACGTATCTTTACAAG+TGG - chr8_1:31676647-31676666 Msa1189620:intron 35.0%
TTTACAAGTGGAAAGCCTTT+GGG - chr8_1:31676659-31676678 Msa1189620:intron 35.0%
!! AATGGTTTTACAAGTGGAGA+AGG - chr8_1:31676710-31676729 Msa1189620:intron 35.0%
AGAAAGAGTCAGAGAAATGT+TGG - chr8_1:31676746-31676765 Msa1189620:intron 35.0%
GAAAGAGTCAGAGAAATGTT+GGG - chr8_1:31676747-31676766 Msa1189620:intron 35.0%
AACCACGATAATATGGTAGA+AGG - chr8_1:31676813-31676832 Msa1189620:intron 35.0%
ACCACGATAATATGGTAGAA+GGG - chr8_1:31676814-31676833 Msa1189620:intron 35.0%
ATATACACCAGTCAGGTTAA+TGG - chr8_1:31676966-31676985 Msa1189620:intron 35.0%
!!! AACATTTTGGAGTTTCGACT+TGG - chr8_1:31677003-31677022 Msa1189620:intron 35.0%
CAAGATTCCATGCATAAAAG+GGG + chr8_1:31677081-31677100 None:intergenic 35.0%
GCAAGATTCCATGCATAAAA+GGG + chr8_1:31677082-31677101 None:intergenic 35.0%
AGCAAGATTCCATGCATAAA+AGG + chr8_1:31677083-31677102 None:intergenic 35.0%
ATATGAGCAACAGAAGAATG+TGG + chr8_1:31677275-31677294 None:intergenic 35.0%
TAGGAAGATGTTCTGTACAA+GGG + chr8_1:31677311-31677330 None:intergenic 35.0%
ATAGGAAGATGTTCTGTACA+AGG + chr8_1:31677312-31677331 None:intergenic 35.0%
AACTGTTGATCAAACCAGTT+AGG + chr8_1:31677392-31677411 None:intergenic 35.0%
TCTTCTCCAAATTACAGTAC+AGG - chr8_1:31677620-31677639 Msa1189620:intron 35.0%
AGTTGAACATTCCTTATGCT+GGG - chr8_1:31677645-31677664 Msa1189620:intron 35.0%
TCTGGATTCGATTATTGAGA+GGG + chr8_1:31677793-31677812 None:intergenic 35.0%
TTCTGGATTCGATTATTGAG+AGG + chr8_1:31677794-31677813 None:intergenic 35.0%
!! TTTGGTTGATCCATTGATTC+TGG + chr8_1:31677811-31677830 None:intergenic 35.0%
AATCAATGGATCAACCAAAC+AGG - chr8_1:31677812-31677831 Msa1189620:intron 35.0%
ATCAATGGATCAACCAAACA+GGG - chr8_1:31677813-31677832 Msa1189620:intron 35.0%
GCTGCAACATATTATTCAGA+AGG + chr8_1:31677862-31677881 None:intergenic 35.0%
TTGTCTATTCTCTCTAACGA+TGG + chr8_1:31678041-31678060 None:intergenic 35.0%
AAAATCAACCCGTAAACATC+GGG - chr8_1:31678060-31678079 Msa1189620:intron 35.0%
!! TTGAACAACTTTCGCTTTTC+TGG + chr8_1:31678114-31678133 None:intergenic 35.0%
!!! GTTTTTTTGCAAGAGAAGCT+TGG + chr8_1:31678246-31678265 None:intergenic 35.0%
TCTCTTGCAAAAAAACCTTC+TGG - chr8_1:31678250-31678269 Msa1189620:intron 35.0%
CTCTTGCAAAAAAACCTTCT+GGG - chr8_1:31678251-31678270 Msa1189620:intron 35.0%
TCTTGCAAAAAAACCTTCTG+GGG - chr8_1:31678252-31678271 Msa1189620:intron 35.0%
! ATTTTGCCCAACCAAAATGA+AGG - chr8_1:31678291-31678310 Msa1189620:intron 35.0%
!! GAAAGATCCTTCATTTTGGT+TGG + chr8_1:31678301-31678320 None:intergenic 35.0%
GATCAATATCATCTACATCG+AGG + chr8_1:31678546-31678565 None:intergenic 35.0%
CTTGTAGAAGATTGCACTTA+AGG + chr8_1:31678573-31678592 None:intergenic 35.0%
AAGTGCAATCTTCTACAAGA+TGG - chr8_1:31678574-31678593 Msa1189620:intron 35.0%
GAACTCAATTCACAAGAAGA+AGG - chr8_1:31678599-31678618 Msa1189620:intron 35.0%
! AAGAAGAAGGAATGTCCTTT+TGG - chr8_1:31678612-31678631 Msa1189620:intron 35.0%
CGAGAACAGATACTAAAACA+AGG + chr8_1:31679032-31679051 None:intergenic 35.0%
TTGAGAACCAGTTAGAAGTT+CGG + chr8_1:31679064-31679083 None:intergenic 35.0%
AGCTGCTTCGAACAAAAAAT+TGG - chr8_1:31679083-31679102 Msa1189620:CDS 35.0%
GCTGCTTCGAACAAAAAATT+GGG - chr8_1:31679084-31679103 Msa1189620:CDS 35.0%
TATACAAGGGGAACAAAATG+TGG - chr8_1:31679203-31679222 Msa1189620:intron 35.0%
TGCTGCTAAAGTAGTTAGTA+AGG - chr8_1:31679242-31679261 Msa1189620:intron 35.0%
CTAGTAATAACTTTCTCTGC+CGG + chr8_1:31679314-31679333 None:intergenic 35.0%
AATGTACTTGAACAGATGCA+AGG + chr8_1:31679499-31679518 None:intergenic 35.0%
ATGATTCCATGAGAATGTGT+TGG - chr8_1:31679572-31679591 Msa1189620:intron 35.0%
TAACTGAAAGGGAACATCAT+GGG + chr8_1:31679773-31679792 None:intergenic 35.0%
ATAACTGAAAGGGAACATCA+TGG + chr8_1:31679774-31679793 None:intergenic 35.0%
CCCTTTCAGTTATGTATACA+AGG - chr8_1:31679781-31679800 Msa1189620:intron 35.0%
GTTATGTATACAAGGTGTGA+AGG - chr8_1:31679789-31679808 Msa1189620:intron 35.0%
TAATCACATGTCTCGGTATC+AGG + chr8_1:31674122-31674141 None:intergenic 40.0%
ATGAAGCACGGATACAAACA+CGG + chr8_1:31674213-31674232 None:intergenic 40.0%
TGTTTGTATCCGTGCTTCAT+AGG - chr8_1:31674213-31674232 Msa1189620:CDS 40.0%
GAACAAGAACCTATGAAGCA+CGG + chr8_1:31674225-31674244 None:intergenic 40.0%
!! GGAAATATGCTTTGGGAGAA+TGG + chr8_1:31674752-31674771 None:intergenic 40.0%
AATCAGTTGACCATCAAAGC+AGG + chr8_1:31674897-31674916 None:intergenic 40.0%
TCCTTTAGACAGAACACACA+GGG + chr8_1:31674923-31674942 None:intergenic 40.0%
TATTGCAGACGGATGATGTA+AGG - chr8_1:31675026-31675045 Msa1189620:CDS 40.0%
!!! TCTCACAACCACTTTTTCGA+AGG - chr8_1:31675069-31675088 Msa1189620:CDS 40.0%
!!! CAACCACTTTTTCGAAGGTA+TGG - chr8_1:31675074-31675093 Msa1189620:CDS 40.0%
CATCCATACCTTCGAAAAAG+TGG + chr8_1:31675080-31675099 None:intergenic 40.0%
! CCGGAGTTGGTTAGTAAATT+TGG + chr8_1:31675562-31675581 None:intergenic 40.0%
! CCAAAAAGTGCAGGAGTTAT+CGG - chr8_1:31675966-31675985 Msa1189620:CDS 40.0%
! CTTTTTCTCTCCCCTCTATA+CGG - chr8_1:31676321-31676340 Msa1189620:intron 40.0%
! TTTTTCTCTCCCCTCTATAC+GGG - chr8_1:31676322-31676341 Msa1189620:intron 40.0%
AATAGGGAGAAAACCAAGTC+TGG + chr8_1:31676357-31676376 None:intergenic 40.0%
TTTGGGTCTTCGAAATCAAG+GGG - chr8_1:31676411-31676430 Msa1189620:intron 40.0%
CTTCGAAATCAAGGGGAAAT+TGG - chr8_1:31676418-31676437 Msa1189620:intron 40.0%
CTTTACAAGTGGAAAGCCTT+TGG - chr8_1:31676658-31676677 Msa1189620:intron 40.0%
CCACGATAATATGGTAGAAG+GGG - chr8_1:31676815-31676834 Msa1189620:intron 40.0%
CACGATAATATGGTAGAAGG+GGG - chr8_1:31676816-31676835 Msa1189620:intron 40.0%
!!! TGGGAAATTGCCTTGTTTTG+TGG - chr8_1:31676873-31676892 Msa1189620:intron 40.0%
TGGTCATTCATAAGGTCTGT+AGG - chr8_1:31676893-31676912 Msa1189620:intron 40.0%
GACATAGATATACACCAGTC+AGG - chr8_1:31676959-31676978 Msa1189620:intron 40.0%
AACAGAAGAATGTGGATGTG+AGG + chr8_1:31677267-31677286 None:intergenic 40.0%
TGATCAAACCAGTTAGGAAC+AGG + chr8_1:31677386-31677405 None:intergenic 40.0%
!! GTGAAACTGTTGATGATGAC+AGG - chr8_1:31677420-31677439 Msa1189620:intron 40.0%
ATGTGTGAAATGGAGGAATG+TGG + chr8_1:31677461-31677480 None:intergenic 40.0%
TCCTCCATTTCACACATAGA+AGG - chr8_1:31677464-31677483 Msa1189620:intron 40.0%
TCCTTCTATGTGTGAAATGG+AGG + chr8_1:31677468-31677487 None:intergenic 40.0%
!! GAAGACTTTGGTGCCAAAAT+TGG + chr8_1:31677560-31677579 None:intergenic 40.0%
! AACTGGCCTGTACTGTAATT+TGG + chr8_1:31677629-31677648 None:intergenic 40.0%
CAGCATAAGGAATGTTCAAC+TGG + chr8_1:31677646-31677665 None:intergenic 40.0%
CAGTTGAACATTCCTTATGC+TGG - chr8_1:31677644-31677663 Msa1189620:intron 40.0%
GTTGAACATTCCTTATGCTG+GGG - chr8_1:31677646-31677665 Msa1189620:intron 40.0%
TTGAACATTCCTTATGCTGG+GGG - chr8_1:31677647-31677666 Msa1189620:intron 40.0%
ATTCAATTCTGCGTCACACT+TGG - chr8_1:31677709-31677728 Msa1189620:intron 40.0%
TTCAATTCTGCGTCACACTT+GGG - chr8_1:31677710-31677729 Msa1189620:intron 40.0%
AGGGGAGCCAGTATTAAATT+GGG + chr8_1:31677774-31677793 None:intergenic 40.0%
CTGGATTCGATTATTGAGAG+GGG + chr8_1:31677792-31677811 None:intergenic 40.0%
AACCAAACAGGGTTGTATCT+TGG - chr8_1:31677824-31677843 Msa1189620:intron 40.0%
GAGACACTGATCCATTATGA+TGG + chr8_1:31677895-31677914 None:intergenic 40.0%
TTTAATCACCATCTTCCGTC+TGG - chr8_1:31678010-31678029 Msa1189620:intron 40.0%
!! TTCAGGTTGATACTATAGGG+AGG - chr8_1:31678359-31678378 Msa1189620:intron 40.0%
ACCATCCTCAATAGTGATTC+TGG + chr8_1:31678512-31678531 None:intergenic 40.0%
TGCAATCTTCTACAAGATGG+TGG - chr8_1:31678577-31678596 Msa1189620:intron 40.0%
! AGAAGGAATGTCCTTTTGGA+AGG - chr8_1:31678616-31678635 Msa1189620:intron 40.0%
ATGTTGCTAGTCCTTCCAAA+AGG + chr8_1:31678630-31678649 None:intergenic 40.0%
TTGTGTCCATTCTTTCCTAG+CGG + chr8_1:31678670-31678689 None:intergenic 40.0%
TAAGAAGACAAGGTCATCCT+TGG + chr8_1:31678707-31678726 None:intergenic 40.0%
ATGCTAGTCGTAAGAAGACA+AGG + chr8_1:31678717-31678736 None:intergenic 40.0%
ACGACTAGCATCTATTTCCA+AGG - chr8_1:31678726-31678745 Msa1189620:intron 40.0%
CGACTAGCATCTATTTCCAA+GGG - chr8_1:31678727-31678746 Msa1189620:intron 40.0%
TAGCATCTATTTCCAAGGGA+CGG - chr8_1:31678731-31678750 Msa1189620:intron 40.0%
AACAACCATAGCAAGATCAC+TGG + chr8_1:31678890-31678909 None:intergenic 40.0%
GTTGTTTGTCAGTGTATCGA+AGG - chr8_1:31678904-31678923 Msa1189620:intron 40.0%
TTGTCAGTGTATCGAAGGAA+TGG - chr8_1:31678909-31678928 Msa1189620:intron 40.0%
TGTATCGAAGGAATGGATCT+TGG - chr8_1:31678916-31678935 Msa1189620:intron 40.0%
!! GGAAATCGTTCATTTTGGCA+GGG - chr8_1:31679105-31679124 Msa1189620:CDS 40.0%
! ATGCAGTCACTGGTTATACA+AGG - chr8_1:31679189-31679208 Msa1189620:intron 40.0%
! TGCAGTCACTGGTTATACAA+GGG - chr8_1:31679190-31679209 Msa1189620:intron 40.0%
CTGGATTTAACAGCTATGCT+GGG - chr8_1:31679361-31679380 Msa1189620:intron 40.0%
TTGAACAGATGCAAGGTAAG+CGG + chr8_1:31679492-31679511 None:intergenic 40.0%
GAAAATGCAAGTTGCATCTG+TGG - chr8_1:31679538-31679557 Msa1189620:intron 40.0%
CAAATGCCAACACATTCTCA+TGG + chr8_1:31679581-31679600 None:intergenic 40.0%
TGTGTCTACGAAAAGTCTCA+TGG + chr8_1:31679710-31679729 None:intergenic 40.0%
! ACTTTTCGTAGACACACTAG+TGG - chr8_1:31679714-31679733 Msa1189620:intron 40.0%
TGGTTAGCATGTACAGGTTT+AGG - chr8_1:31679734-31679753 Msa1189620:intron 40.0%
TGTATACAAGGTGTGAAGGT+TGG - chr8_1:31679793-31679812 Msa1189620:intron 40.0%
GTATACAAGGTGTGAAGGTT+GGG - chr8_1:31679794-31679813 Msa1189620:intron 40.0%
AAACATGTTGACCAGTTTGG+TGG - chr8_1:31679876-31679895 Msa1189620:exon 40.0%
AACATGTTGACCAGTTTGGT+GGG - chr8_1:31679877-31679896 Msa1189620:exon 40.0%
GGCTGAAATACCATAGGAAT+AGG - chr8_1:31679899-31679918 Msa1189620:five_prime_UTR 40.0%
! GTACTGACACAAGTACGACA+CGG + chr8_1:31674100-31674119 None:intergenic 45.0%
CACGGACATTGGATATGACA+GGG + chr8_1:31674195-31674214 None:intergenic 45.0%
ACACGGACATTGGATATGAC+AGG + chr8_1:31674196-31674215 None:intergenic 45.0%
ACGGATACAAACACGGACAT+TGG + chr8_1:31674206-31674225 None:intergenic 45.0%
CTTCGGTAAAGATGTTGCTG+AGG - chr8_1:31674373-31674392 Msa1189620:CDS 45.0%
TGTTGCTGAGGAAGTTGAGT+TGG - chr8_1:31674385-31674404 Msa1189620:CDS 45.0%
GTTGCTGAGGAAGTTGAGTT+GGG - chr8_1:31674386-31674405 Msa1189620:CDS 45.0%
! TTGCTGAGGAAGTTGAGTTG+GGG - chr8_1:31674387-31674406 Msa1189620:CDS 45.0%
CCTCGTTGAACGTAACAGAA+GGG + chr8_1:31674439-31674458 None:intergenic 45.0%
TCCTCGTTGAACGTAACAGA+AGG + chr8_1:31674440-31674459 None:intergenic 45.0%
TTCTGTTACGTTCAACGAGG+AGG - chr8_1:31674439-31674458 Msa1189620:CDS 45.0%
! GAACGTTTTGCCTGCTTTGA+TGG - chr8_1:31674884-31674903 Msa1189620:CDS 45.0%
GTCCTTTAGACAGAACACAC+AGG + chr8_1:31674924-31674943 None:intergenic 45.0%
GGTACAGTTAGTGGAGGATA+AGG - chr8_1:31675283-31675302 Msa1189620:CDS 45.0%
! AGTTATTGGCCTGCTTCTAC+AGG + chr8_1:31675452-31675471 None:intergenic 45.0%
! TTCTGGCTGCTTGATGTTTC+CGG + chr8_1:31675581-31675600 None:intergenic 45.0%
! GTTAGTGGACCAAAAAGTGC+AGG - chr8_1:31675957-31675976 Msa1189620:CDS 45.0%
! CCGATAACTCCTGCACTTTT+TGG + chr8_1:31675969-31675988 None:intergenic 45.0%
! TTTCAGCACTTGAGGTGCTT+AGG - chr8_1:31676106-31676125 Msa1189620:CDS 45.0%
! TTCAGCACTTGAGGTGCTTA+GGG - chr8_1:31676107-31676126 Msa1189620:CDS 45.0%
!! TTTAGGGAGAGTGCTGCAAA+TGG + chr8_1:31676279-31676298 None:intergenic 45.0%
CGTATAGAGGGGAGAGAAAA+AGG + chr8_1:31676323-31676342 None:intergenic 45.0%
CACACGCTGCATTCTGAATA+GGG + chr8_1:31676373-31676392 None:intergenic 45.0%
TCACACGCTGCATTCTGAAT+AGG + chr8_1:31676374-31676393 None:intergenic 45.0%
CCCCTTCTACCATATTATCG+TGG + chr8_1:31676818-31676837 None:intergenic 45.0%
CAGATTCCTCTGCTTCTGAA+TGG - chr8_1:31677180-31677199 Msa1189620:intron 45.0%
TGCTTCTGAATGGTCACAGA+GGG - chr8_1:31677190-31677209 Msa1189620:intron 45.0%
CTAGTGAACCTGTTCCTAAC+TGG - chr8_1:31677375-31677394 Msa1189620:intron 45.0%
!! CTGTTGATGATGACAGGAGA+TGG - chr8_1:31677426-31677445 Msa1189620:intron 45.0%
CGGTCCTTCTATGTGTGAAA+TGG + chr8_1:31677471-31677490 None:intergenic 45.0%
! GATGTTCTATGCAAGGGCAT+CGG + chr8_1:31677491-31677510 None:intergenic 45.0%
TTTACTTCTTATCCTCCCCC+TGG - chr8_1:31677581-31677600 Msa1189620:intron 45.0%
TTACTTCTTATCCTCCCCCT+GGG - chr8_1:31677582-31677601 Msa1189620:intron 45.0%
! CCAAGATGCGGCTCATATTT+TGG + chr8_1:31677740-31677759 None:intergenic 45.0%
CCAAAATATGAGCCGCATCT+TGG - chr8_1:31677737-31677756 Msa1189620:intron 45.0%
AAATATGAGCCGCATCTTGG+TGG - chr8_1:31677740-31677759 Msa1189620:intron 45.0%
GCTAAGTTTCCACCAAGATG+CGG + chr8_1:31677752-31677771 None:intergenic 45.0%
GAGGGGAGCCAGTATTAAAT+TGG + chr8_1:31677775-31677794 None:intergenic 45.0%
CTCCAAGATACAACCCTGTT+TGG + chr8_1:31677829-31677848 None:intergenic 45.0%
CTAACGATGGATGATCCAGA+CGG + chr8_1:31678028-31678047 None:intergenic 45.0%
TTGAGAGACCCGATGTTTAC+GGG + chr8_1:31678071-31678090 None:intergenic 45.0%
GTTGAGAGACCCGATGTTTA+CGG + chr8_1:31678072-31678091 None:intergenic 45.0%
TAAACATCGGGTCTCTCAAC+AGG - chr8_1:31678072-31678091 Msa1189620:intron 45.0%
AAACATCGGGTCTCTCAACA+GGG - chr8_1:31678073-31678092 Msa1189620:intron 45.0%
!!! ACTTTCGCTTTTCTGGCTAC+TGG + chr8_1:31678107-31678126 None:intergenic 45.0%
AAACCTGTGTGGCTCAGTAT+TGG + chr8_1:31678338-31678357 None:intergenic 45.0%
TCAACCTGAAGAAACCTGTG+TGG + chr8_1:31678349-31678368 None:intergenic 45.0%
GAGGATCAGCTTCAAGAAGA+GGG + chr8_1:31678414-31678433 None:intergenic 45.0%
GCCAGAATCACTATTGAGGA+TGG - chr8_1:31678508-31678527 Msa1189620:intron 45.0%
AGCAACATCACTTCATCTCG+TGG - chr8_1:31678642-31678661 Msa1189620:intron 45.0%
TGTGTCCATTCTTTCCTAGC+GGG + chr8_1:31678669-31678688 None:intergenic 45.0%
GGAAAGAATGGACACAAAGC+TGG - chr8_1:31678673-31678692 Msa1189620:intron 45.0%
! AGCTCCTAGCGAAGTATCTT+CGG - chr8_1:31678755-31678774 Msa1189620:intron 45.0%
TATCTTCGGTTGCTTGATCC+TGG - chr8_1:31678769-31678788 Msa1189620:intron 45.0%
! GGAATGGATCTTGGTTCTCT+TGG - chr8_1:31678925-31678944 Msa1189620:intron 45.0%
ACCAGTTAGAAGTTCGGTAG+CGG + chr8_1:31679058-31679077 None:intergenic 45.0%
!! GGGAAATCGTTCATTTTGGC+AGG - chr8_1:31679104-31679123 Msa1189620:CDS 45.0%
! GCAGTCACTGGTTATACAAG+GGG - chr8_1:31679191-31679210 Msa1189620:intron 45.0%
GAACAAAATGTGGCTGCGAT+TGG - chr8_1:31679213-31679232 Msa1189620:intron 45.0%
TAGCTGTTAAATCCAGCCAC+AGG + chr8_1:31679357-31679376 None:intergenic 45.0%
GCTGGATTTAACAGCTATGC+TGG - chr8_1:31679360-31679379 Msa1189620:intron 45.0%
AATGCAAGTTGCATCTGTGG+CGG - chr8_1:31679541-31679560 Msa1189620:intron 45.0%
CACTAGTGGTTAGCATGTAC+AGG - chr8_1:31679728-31679747 Msa1189620:intron 45.0%
GGGAAACATGTTGACCAGTT+TGG - chr8_1:31679873-31679892 Msa1189620:exon 45.0%
! ACATGTTGACCAGTTTGGTG+GGG - chr8_1:31679878-31679897 Msa1189620:exon 45.0%
!!! TATTTATTTATTTTTTAATC+TGG - chr8_1:31675174-31675193 Msa1189620:CDS 5.0%
!! TATTAAAAAATAAAATAGAT+AGG - chr8_1:31675250-31675269 Msa1189620:CDS 5.0%
!! TGCTGAGGAAGTTGAGTTGG+GGG - chr8_1:31674388-31674407 Msa1189620:CDS 50.0%
CCCTTCTGTTACGTTCAACG+AGG - chr8_1:31674436-31674455 Msa1189620:CDS 50.0%
GCCCTGTGTGTTCTGTCTAA+AGG - chr8_1:31674919-31674938 Msa1189620:CDS 50.0%
TCTGTGTTGCCTGTAGAAGC+AGG - chr8_1:31675440-31675459 Msa1189620:CDS 50.0%
CTGCTTGATGTTTCCGGAGT+TGG + chr8_1:31675575-31675594 None:intergenic 50.0%
GTGCAGGAGTTATCGGTGAT+CGG - chr8_1:31675973-31675992 Msa1189620:CDS 50.0%
TGCAGGAGTTATCGGTGATC+GGG - chr8_1:31675974-31675993 Msa1189620:CDS 50.0%
TAGGTGTGTCCCGTATAGAG+GGG + chr8_1:31676334-31676353 None:intergenic 50.0%
GTAGGTGTGTCCCGTATAGA+GGG + chr8_1:31676335-31676354 None:intergenic 50.0%
GGGAGAAAACCAAGTCTGGT+AGG + chr8_1:31676353-31676372 None:intergenic 50.0%
ACAAGTGGAAAGCCTTTGGG+TGG - chr8_1:31676662-31676681 Msa1189620:intron 50.0%
CAAGTGGAAAGCCTTTGGGT+GGG - chr8_1:31676663-31676682 Msa1189620:intron 50.0%
CTGTGACCATTCAGAAGCAG+AGG + chr8_1:31677189-31677208 None:intergenic 50.0%
CTGCTTCTGAATGGTCACAG+AGG - chr8_1:31677189-31677208 Msa1189620:intron 50.0%
AGAGGGATGATGTTCCCTAC+TGG - chr8_1:31677207-31677226 Msa1189620:intron 50.0%
GAGGGATGATGTTCCCTACT+GGG - chr8_1:31677208-31677227 Msa1189620:intron 50.0%
GAACCTTCGTCAACCCAGTA+GGG + chr8_1:31677224-31677243 None:intergenic 50.0%
AGAACCTTCGTCAACCCAGT+AGG + chr8_1:31677225-31677244 None:intergenic 50.0%
GTTGACGAAGGTTCTCAGGA+TGG - chr8_1:31677230-31677249 Msa1189620:intron 50.0%
GTTCTCAGGATGGCAAACGA+TGG - chr8_1:31677240-31677259 Msa1189620:intron 50.0%
CTTCCTATCCTGAGCAGCAA+CGG - chr8_1:31677324-31677343 Msa1189620:intron 50.0%
CACTAGAGCGATGTTGGAGT+TGG + chr8_1:31677361-31677380 None:intergenic 50.0%
CAGGTTCACTAGAGCGATGT+TGG + chr8_1:31677367-31677386 None:intergenic 50.0%
TACTTCTTATCCTCCCCCTG+GGG - chr8_1:31677583-31677602 Msa1189620:intron 50.0%
ATTGTTGAGACCTACCCCCA+GGG + chr8_1:31677601-31677620 None:intergenic 50.0%
AATTCTGCGTCACACTTGGG+TGG - chr8_1:31677713-31677732 Msa1189620:intron 50.0%
TGCAACTGAGGCAGTAAGTG+AGG + chr8_1:31677917-31677936 None:intergenic 50.0%
TATCCTGTTCAAGCGTCAGC+TGG - chr8_1:31677959-31677978 Msa1189620:intron 50.0%
TGGATGATCCAGACGGAAGA+TGG + chr8_1:31678021-31678040 None:intergenic 50.0%
!! TGTGTGGCTCAGTATTGGCA+CGG + chr8_1:31678333-31678352 None:intergenic 50.0%
TGAGCCACACAGGTTTCTTC+AGG - chr8_1:31678342-31678361 Msa1189620:intron 50.0%
GGAGGATCAGCTTCAAGAAG+AGG + chr8_1:31678415-31678434 None:intergenic 50.0%
TTCAGAGAAGTCCCTTGAGC+AGG - chr8_1:31678471-31678490 Msa1189620:intron 50.0%
GAACAATGGCTCCTGCTCAA+GGG + chr8_1:31678485-31678504 None:intergenic 50.0%
! GTGATTCTGGCTGCGAACAA+TGG + chr8_1:31678499-31678518 None:intergenic 50.0%
CGCAGCCAGAATCACTATTG+AGG - chr8_1:31678504-31678523 Msa1189620:intron 50.0%
!! CAAAGCTGGTCTTACTGCCA+AGG - chr8_1:31678687-31678706 Msa1189620:intron 50.0%
GCAACCGAAGATACTTCGCT+AGG + chr8_1:31678762-31678781 None:intergenic 50.0%
! ATCCTGGTAGTGAGCTTGTG+CGG - chr8_1:31678785-31678804 Msa1189620:intron 50.0%
TCTGCTGCTGCTGAATCAGA+GGG + chr8_1:31678862-31678881 None:intergenic 50.0%
GACTGCCAGTGATCTTGCTA+TGG - chr8_1:31678882-31678901 Msa1189620:intron 50.0%
ACCGCTACCGAACTTCTAAC+TGG - chr8_1:31679054-31679073 Msa1189620:CDS 50.0%
CCAGTGACTGCATGATACTC+TGG + chr8_1:31679182-31679201 None:intergenic 50.0%
! CCAGAGTATCATGCAGTCAC+TGG - chr8_1:31679179-31679198 Msa1189620:intron 50.0%
TAACTTTCTCTGCCGGTCGT+TGG + chr8_1:31679307-31679326 None:intergenic 50.0%
GTATTTCAGCCCCACCAAAC+TGG + chr8_1:31679890-31679909 None:intergenic 50.0%
TGGTGGGGCTGAAATACCAT+AGG - chr8_1:31679893-31679912 Msa1189620:five_prime_UTR 50.0%
!! GCTGAGGAAGTTGAGTTGGG+GGG - chr8_1:31674389-31674408 Msa1189620:CDS 55.0%
! AGCACTTGAGGTGCTTAGGG+TGG - chr8_1:31676110-31676129 Msa1189620:CDS 55.0%
! GCACTTGAGGTGCTTAGGGT+GGG - chr8_1:31676111-31676130 Msa1189620:CDS 55.0%
GGTAGGTGTGTCCCGTATAG+AGG + chr8_1:31676336-31676355 None:intergenic 55.0%
! GTTCCCTACTGGGTTGACGA+AGG - chr8_1:31677218-31677237 Msa1189620:intron 55.0%
! CTGGGTTGACGAAGGTTCTC+AGG - chr8_1:31677226-31677245 Msa1189620:intron 55.0%
ACTTCTTATCCTCCCCCTGG+GGG - chr8_1:31677584-31677603 Msa1189620:intron 55.0%
TTGTTGAGACCTACCCCCAG+GGG + chr8_1:31677600-31677619 None:intergenic 55.0%
GATTGTTGAGACCTACCCCC+AGG + chr8_1:31677602-31677621 None:intergenic 55.0%
ATGTGAGCTCCCCCAGCATA+AGG + chr8_1:31677659-31677678 None:intergenic 55.0%
TTATGCTGGGGGAGCTCACA+TGG - chr8_1:31677658-31677677 Msa1189620:intron 55.0%
TGCTGCTGTTGCTGCAACTG+AGG + chr8_1:31677929-31677948 None:intergenic 55.0%
AAGCCAGCTGACGCTTGAAC+AGG + chr8_1:31677965-31677984 None:intergenic 55.0%
! GCGTCAGCTGGCTTAATGTC+AGG - chr8_1:31677971-31677990 Msa1189620:intron 55.0%
!! GTGTGGCTCAGTATTGGCAC+GGG + chr8_1:31678332-31678351 None:intergenic 55.0%
GTGCCAATACTGAGCCACAC+AGG - chr8_1:31678332-31678351 Msa1189620:intron 55.0%
TCAGCTTCAAGAAGAGGGCG+AGG + chr8_1:31678409-31678428 None:intergenic 55.0%
AATTCGCTCAGAGCCACCAC+TGG + chr8_1:31678449-31678468 None:intergenic 55.0%
CGAACAATGGCTCCTGCTCA+AGG + chr8_1:31678486-31678505 None:intergenic 55.0%
GTGGACCCGCTAGGAAAGAA+TGG - chr8_1:31678661-31678680 Msa1189620:intron 55.0%
ATCCGCACAAGCTCACTACC+AGG + chr8_1:31678790-31678809 None:intergenic 55.0%
! GCTTGTGCGGATTGTCTGCA+TGG - chr8_1:31678798-31678817 Msa1189620:intron 55.0%
CTGCTGCTGCTGAATCAGAG+GGG + chr8_1:31678861-31678880 None:intergenic 55.0%
CTCTGCTGCTGCTGAATCAG+AGG + chr8_1:31678863-31678882 None:intergenic 55.0%
TGGTGCTTGTCTTGCAGCAG+TGG - chr8_1:31678945-31678964 Msa1189620:intron 55.0%
ATCTCCAGCAGGACTTCCGA+GGG + chr8_1:31679001-31679020 None:intergenic 55.0%
CTTGCACGCAAGAGCTCAAC+AGG + chr8_1:31679273-31679292 None:intergenic 55.0%
GTCTTCCTCACACCAACGAC+CGG - chr8_1:31679292-31679311 Msa1189620:intron 55.0%
! TGATGGGCAACTCTTGCCCT+AGG - chr8_1:31679842-31679861 Msa1189620:CDS 55.0%
GATGGGCAACTCTTGCCCTA+GGG - chr8_1:31679843-31679862 Msa1189620:CDS 55.0%
ATGGGCAACTCTTGCCCTAG+GGG - chr8_1:31679844-31679863 Msa1189620:CDS 55.0%
TGTTTCCCAGTGCACCCCTA+GGG + chr8_1:31679861-31679880 None:intergenic 55.0%
ATGTTTCCCAGTGCACCCCT+AGG + chr8_1:31679862-31679881 None:intergenic 55.0%
CGGGACACACCTACCAGACT+TGG - chr8_1:31676341-31676360 Msa1189620:intron 60.0%
AGCTTGCAGCACCCACCCAA+AGG + chr8_1:31676677-31676696 None:intergenic 60.0%
CTGCCGTTGCTGCTCAGGAT+AGG + chr8_1:31677330-31677349 None:intergenic 60.0%
TGTTGAGACCTACCCCCAGG+GGG + chr8_1:31677599-31677618 None:intergenic 60.0%
AGAGGGCGAGGCTGACGAAT+GGG + chr8_1:31678397-31678416 None:intergenic 60.0%
AAGAGGGCGAGGCTGACGAA+TGG + chr8_1:31678398-31678417 None:intergenic 60.0%
CCACTGGCAGAGGAGTTTGG+AGG + chr8_1:31678433-31678452 None:intergenic 60.0%
CCTCCAAACTCCTCTGCCAG+TGG - chr8_1:31678430-31678449 Msa1189620:CDS 60.0%
CCACCACTGGCAGAGGAGTT+TGG + chr8_1:31678436-31678455 None:intergenic 60.0%
CCAAACTCCTCTGCCAGTGG+TGG - chr8_1:31678433-31678452 Msa1189620:CDS 60.0%
CTTCATCTCGTGGACCCGCT+AGG - chr8_1:31678652-31678671 Msa1189620:intron 60.0%
TCTCCAGCAGGACTTCCGAG+GGG + chr8_1:31679000-31679019 None:intergenic 60.0%
CATCTCCAGCAGGACTTCCG+AGG + chr8_1:31679002-31679021 None:intergenic 60.0%
CTCGGAAGTCCTGCTGGAGA+TGG - chr8_1:31679000-31679019 Msa1189620:intron 60.0%
!! AGGGAAGCACCATCTCCAGC+AGG + chr8_1:31679012-31679031 None:intergenic 60.0%
! TCTTGCCCTAGGGGTGCACT+GGG - chr8_1:31679853-31679872 Msa1189620:CDS 60.0%
TGCAGCTGCCGTTGCTGCTC+AGG + chr8_1:31677335-31677354 None:intergenic 65.0%
CTTATCCTCCCCCTGGGGGT+AGG - chr8_1:31677588-31677607 Msa1189620:intron 65.0%
CTCAGAGCCACCACTGGCAG+AGG + chr8_1:31678443-31678462 None:intergenic 65.0%
CGCTAGGAGCTTCCGTCCCT+TGG + chr8_1:31678746-31678765 None:intergenic 65.0%
CTCCAGCAGGACTTCCGAGG+GGG + chr8_1:31678999-31679018 None:intergenic 65.0%
CTCTGCCGGTCGTTGGTGTG+AGG + chr8_1:31679300-31679319 None:intergenic 65.0%
CACTCAGCGCTCTTCGCCTG+TGG - chr8_1:31679338-31679357 Msa1189620:intron 65.0%
! CTCTTGCCCTAGGGGTGCAC+TGG - chr8_1:31679852-31679871 Msa1189620:CDS 65.0%
TGAGACCTACCCCCAGGGGG+AGG + chr8_1:31677596-31677615 None:intergenic 70.0%
GCGCAGAGGAGGAGGCTCTG+AGG + chr8_1:31678977-31678996 None:intergenic 70.0%
CAGCGCTCTTCGCCTGTGGC+TGG - chr8_1:31679342-31679361 Msa1189620:intron 70.0%
CCTCCTCCTCTGCGCCCCCT+CGG - chr8_1:31678982-31679001 Msa1189620:intron 75.0%
! CTTCCGAGGGGGCGCAGAGG+AGG + chr8_1:31678988-31679007 None:intergenic 75.0%
! GGACTTCCGAGGGGGCGCAG+AGG + chr8_1:31678991-31679010 None:intergenic 75.0%
CGCCCCCTCGGAAGTCCTGC+TGG - chr8_1:31678994-31679013 Msa1189620:intron 75.0%
!! CCGAGGGGGCGCAGAGGAGG+AGG + chr8_1:31678985-31679004 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 31673528 31679990 31673528 ID=Msa1189620;Name=Msa1189620
chr8_1 mRNA 31673528 31679990 31673528 ID=Msa1189620-mRNA-1;Parent=Msa1189620;Name=Msa1189620-mRNA-1;_AED=0.02;_eAED=0.02;_QI=100|0.5|0.8|0.8|1|1|5|562|866
chr8_1 exon 31673528 31676335 31673528 ID=Msa1189620-mRNA-1:exon:10850;Parent=Msa1189620-mRNA-1
chr8_1 exon 31677072 31677138 31677072 ID=Msa1189620-mRNA-1:exon:10849;Parent=Msa1189620-mRNA-1
chr8_1 exon 31678428 31678484 31678428 ID=Msa1189620-mRNA-1:exon:10848;Parent=Msa1189620-mRNA-1
chr8_1 exon 31679034 31679179 31679034 ID=Msa1189620-mRNA-1:exon:10847;Parent=Msa1189620-mRNA-1
chr8_1 exon 31679806 31679990 31679806 ID=Msa1189620-mRNA-1:exon:10846;Parent=Msa1189620-mRNA-1
chr8_1 five_prime_UTR 31679891 31679990 31679891 ID=Msa1189620-mRNA-1:five_prime_utr;Parent=Msa1189620-mRNA-1
chr8_1 CDS 31679806 31679890 31679806 ID=Msa1189620-mRNA-1:cds;Parent=Msa1189620-mRNA-1
chr8_1 CDS 31679034 31679179 31679034 ID=Msa1189620-mRNA-1:cds;Parent=Msa1189620-mRNA-1
chr8_1 CDS 31678428 31678484 31678428 ID=Msa1189620-mRNA-1:cds;Parent=Msa1189620-mRNA-1
chr8_1 CDS 31677072 31677138 31677072 ID=Msa1189620-mRNA-1:cds;Parent=Msa1189620-mRNA-1
chr8_1 CDS 31674090 31676335 31674090 ID=Msa1189620-mRNA-1:cds;Parent=Msa1189620-mRNA-1
chr8_1 three_prime_UTR 31673528 31674089 31673528 ID=Msa1189620-mRNA-1:three_prime_utr;Parent=Msa1189620-mRNA-1
Gene Sequence

>Msa1189620

ATGGACGTGTTTAATGCTGCTGCTGTTGATTCTCTTGTTGCTTCCAACAACCAAGATCTTAATCTTTTGGGAAATCTTACTAAAGATGGTGCATTATTTGATGCTTCACAATATGCATTCTTCGGTAAAGATGTTGCTGAGGAAGTTGAGTTGGGGGGATTAGATGACGTAAATGATTATATCCCTTCTGTTACGTTCAACGAGGAGGAGTTTTTTCACAATGAAGAAGAGACGGATGATGTAAGGTCTCTTTCTGATATCGATGATCTCACAACCACTTTTTCGAAGAATGCAGCGTGTGAAATTCTTAATATGTCATTTTGGGTCTTCGAAATCAAGGGGAAATTGGGTTACAATTCCTCTGCTTCTGAATGGTCACAGAGGGATGATGTTCCCTACTGGGTTGACGAAGGTTCTCAGGATGGCAAACGATGGTCCTCACATCCACATTCTTCTGTTGCTCATATACAAGAATCAAAGCCCTTGTACAGAACATCTTCCTATCCTGAGCAGCAACGGCAGCTGCAACACCAACTCCAACATCGCTCTAGTGAACCTGTTCCTAACTGGTTTGATCAACAGTTGTATGATAGTGAAACTGTTGATGATGACAGGAGATGGTCGTCGCATCCACATTCCTCCATTTCACACATAGAAGGACCGATGCCCTTGCATAGAACATCTTCATATCCTGACAAGCAACAAGAGCTTCATCGTTTTTTGAGTGAACCAATTTTGGCACCAAAGTCTTCATTTACTTCTTATCCTCCCCCTGGGGGTAGGTCTCAACAATCTTCTCCAAATTACAGTACAGGCCAGTTGAACATTCCTTATGCTGGGGGAGCTCACATGGCATTGTCATCACAAAATCGCTCTCATCTATTCAATTCTGCGTCACACTTGGGTGGACCAAAATATGAGCCGCATCTTGGTGGAAACTTAGCCCAATTTAATACTGGCTCCCCTCTCAATAATCGAATCCAGAATCAATGGATCAACCAAACAGGGTTGTATCTTGGAGATAATTCAAACCTTCTGAATAATATGTTGCAGCAACAACTATACCATCATAATGGATCAGTGTCTCCTCACTTACTGCCTCAGTTGCAGCAACAGCAGCACAGATTGCATTATCCTGTTCAAGCGTCAGCTGGCTTAATGTCAGGTTTACAGCCCCATTTATTTAATCACCATCTTCCGTCTGGATCATCCATCGTTAGAGAGAATAGACAAAAATCAACCCGTAAACATCGGGTCTCTCAACAGGGTTCTAATGCCAGTAGCCAGAAAAGCGAAAGTTGTTCAATACAGTTCAGGTCGAAGTATATGTCTAGCGAAGAAATTGAGAGTATTCTTAAAATGCAGCTTGCTGCTGTTACTCATTTTAATGACCCCTATATTGATGATTATTATCACCAAGCTTCTCTTGCAAAAAAACCTTCTGGGGCTAAATTTAAATTTTCATTTTGCCCAACCAAAATGAAGGATCTTTCTTCACGAGCCCGTGCCAATACTGAGCCACACAGGTTTCTTCAGGTTGATACTATAGGGAGGATTTCGTACTTGCCCATTCGTCAGCCTCGCCCTCTTCTTGAAGCTGATCCTCCAAACTCCTCTGCCAGTGGTGGCTCTGAGCGAATTATTTCAGAGAAGTCCCTTGAGCAGGAGCCATTGTTCGCAGCCAGAATCACTATTGAGGATGGTCTCTGTCTTCTCCTCGATGTAGATGATATTGATCGTTTCCTTAAGTGCAATCTTCTACAAGATGGTGGAACTCAATTCACAAGAAGAAGGAATGTCCTTTTGGAAGGACTAGCAACATCACTTCATCTCGTGGACCCGCTAGGAAAGAATGGACACAAAGCTGGTCTTACTGCCAAGGATGACCTTGTCTTCTTACGACTAGCATCTATTTCCAAGGGACGGAAGCTCCTAGCGAAGTATCTTCGGTTGCTTGATCCTGGTAGTGAGCTTGTGCGGATTGTCTGCATGGCTATATTTCGTCATTTAAGATTTTTATTCGGTAGTATCCCCTCTGATTCAGCAGCAGCAGAGACTGCCAGTGATCTTGCTATGGTTGTTTGTCAGTGTATCGAAGGAATGGATCTTGGTTCTCTTGGTGCTTGTCTTGCAGCAGTGGTTTGTTCCTCAGAGCCTCCTCCTCTGCGCCCCCTCGGAAGTCCTGCTGGAGATGGTGCTTCCCTTGTTTTAGTATCTGTTCTCGAGACCGCTACCGAACTTCTAACTGGTTCTCAAGCTGCTTCGAACAAAAAATTGGGAAATCGTTCATTTTGGCAGGGCTCATTTGATGAATTTTTTGATCTCCTCACAAAGTATTGCATGAATAAGTACCAGAGTATCATGCAGTCACTGGTTATACAAGGGGAACAAAATGTGGCTGCGATTGGATCAGATGCTGCTAAAGTAGTTAGTAAGGAAATGCCTGTTGAGCTCTTGCGTGCAAGTCTTCCTCACACCAACGACCGGCAGAGAAAGTTATTACTAGATTTCACTCAGCGCTCTTCGCCTGTGGCTGGATTTAACAGCTATGCTGGGAGCAGTAGTAATAGTCATGTGAACTCGGAGACAGTGCTTAGTTGA
Protein sequence

>Msa1189620

MDVFNAAAVDSLVASNNQDLNLLGNLTKDGALFDASQYAFFGKDVAEEVELGGLDDVNDYIPSVTFNEEEFFHNEEETDDVRSLSDIDDLTTTFSKNAACEILNMSFWVFEIKGKLGYNSSASEWSQRDDVPYWVDEGSQDGKRWSSHPHSSVAHIQESKPLYRTSSYPEQQRQLQHQLQHRSSEPVPNWFDQQLYDSETVDDDRRWSSHPHSSISHIEGPMPLHRTSSYPDKQQELHRFLSEPILAPKSSFTSYPPPGGRSQQSSPNYSTGQLNIPYAGGAHMALSSQNRSHLFNSASHLGGPKYEPHLGGNLAQFNTGSPLNNRIQNQWINQTGLYLGDNSNLLNNMLQQQLYHHNGSVSPHLLPQLQQQQHRLHYPVQASAGLMSGLQPHLFNHHLPSGSSIVRENRQKSTRKHRVSQQGSNASSQKSESCSIQFRSKYMSSEEIESILKMQLAAVTHFNDPYIDDYYHQASLAKKPSGAKFKFSFCPTKMKDLSSRARANTEPHRFLQVDTIGRISYLPIRQPRPLLEADPPNSSASGGSERIISEKSLEQEPLFAARITIEDGLCLLLDVDDIDRFLKCNLLQDGGTQFTRRRNVLLEGLATSLHLVDPLGKNGHKAGLTAKDDLVFLRLASISKGRKLLAKYLRLLDPGSELVRIVCMAIFRHLRFLFGSIPSDSAAAETASDLAMVVCQCIEGMDLGSLGACLAAVVCSSEPPPLRPLGSPAGDGASLVLVSVLETATELLTGSQAASNKKLGNRSFWQGSFDEFFDLLTKYCMNKYQSIMQSLVIQGEQNVAAIGSDAAKVVSKEMPVELLRASLPHTNDRQRKLLLDFTQRSSPVAGFNSYAGSSSNSHVNSETVLS*