Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328690 | XP_003628954.1 | 86.307 | 482 | 33 | 6 | 1 | 454 | 1 | 477 | 0.0 | 817 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328690 | sp|Q9FKT0|ARP8_ARATH | 63.953 | 430 | 130 | 7 | 45 | 450 | 41 | 469 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328690 | G7LJD4 | 86.307 | 482 | 33 | 6 | 1 | 454 | 1 | 477 | 0.0 | 817 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0051200 | Msa1328690 | 0.824191 | 9.225455e-54 | -8.615850e-47 |
| Msa0051460 | Msa1328690 | 0.815534 | 8.802410e-52 | -8.615850e-47 |
| Msa0101840 | Msa1328690 | 0.818444 | 1.953763e-52 | -8.615850e-47 |
| Msa0143920 | Msa1328690 | 0.822539 | 2.244493e-53 | -8.615850e-47 |
| Msa1279220 | Msa1328690 | 0.804899 | 1.730851e-49 | -8.615850e-47 |
| Msa1328690 | Msa1377070 | 0.824968 | 6.053410e-54 | -8.615850e-47 |
| Msa0389360 | Msa1328690 | 0.808253 | 3.390954e-50 | -8.615850e-47 |
| Msa0438050 | Msa1328690 | 0.807410 | 5.123842e-50 | -8.615850e-47 |
| Msa1199550 | Msa1328690 | 0.935380 | 9.293245e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328690 | MtrunA17_Chr8g0369101 | 86.307 | 482 | 33 | 6 | 1 | 454 | 1 | 477 | 0.0 | 817 |
| Msa1328690 | MtrunA17_Chr3g0080021 | 64.092 | 479 | 139 | 8 | 1 | 454 | 1 | 471 | 0.0 | 598 |
| Msa1328690 | MtrunA17_Chr2g0278591 | 32.203 | 295 | 169 | 10 | 164 | 446 | 91 | 366 | 1.26e-37 | 141 |
| Msa1328690 | MtrunA17_Chr7g0223901 | 31.399 | 293 | 174 | 10 | 164 | 446 | 91 | 366 | 1.66e-37 | 140 |
| Msa1328690 | MtrunA17_Chr3g0129641 | 32.082 | 293 | 172 | 10 | 164 | 446 | 91 | 366 | 3.32e-37 | 140 |
| Msa1328690 | MtrunA17_Chr6g0448881 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 2.32e-36 | 137 |
| Msa1328690 | MtrunA17_Chr2g0328091 | 30.717 | 293 | 176 | 10 | 164 | 446 | 91 | 366 | 6.46e-36 | 136 |
| Msa1328690 | MtrunA17_Chr1g0175391 | 31.058 | 293 | 175 | 10 | 164 | 446 | 91 | 366 | 9.77e-36 | 135 |
| Msa1328690 | MtrunA17_Chr7g0258721 | 31.186 | 295 | 172 | 10 | 164 | 446 | 91 | 366 | 1.27e-35 | 135 |
| Msa1328690 | MtrunA17_Chr7g0224401 | 27.273 | 308 | 179 | 13 | 166 | 448 | 92 | 379 | 1.59e-21 | 95.9 |
| Msa1328690 | MtrunA17_Chr8g0381261 | 24.483 | 290 | 176 | 12 | 192 | 446 | 131 | 412 | 1.76e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328690 | AT5G56180.1 | 63.953 | 430 | 130 | 7 | 45 | 450 | 41 | 469 | 0.0 | 545 |
| Msa1328690 | AT5G56180.3 | 74.837 | 306 | 76 | 1 | 146 | 450 | 32 | 337 | 8.14e-175 | 493 |
| Msa1328690 | AT5G56180.2 | 61.846 | 325 | 99 | 7 | 45 | 345 | 41 | 364 | 6.87e-130 | 381 |
| Msa1328690 | AT2G42090.1 | 29.795 | 292 | 180 | 9 | 164 | 446 | 80 | 355 | 2.89e-38 | 143 |
| Msa1328690 | AT5G09810.1 | 32.542 | 295 | 168 | 10 | 164 | 446 | 91 | 366 | 1.95e-37 | 140 |
| Msa1328690 | AT3G12110.1 | 31.058 | 293 | 175 | 10 | 164 | 446 | 91 | 366 | 9.13e-37 | 139 |
| Msa1328690 | AT2G42100.1 | 29.831 | 295 | 180 | 10 | 164 | 448 | 92 | 369 | 1.76e-36 | 138 |
| Msa1328690 | AT3G53750.1 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 1.11e-35 | 136 |
| Msa1328690 | AT3G53750.2 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 1.11e-35 | 136 |
| Msa1328690 | AT2G37620.1 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 1.11e-35 | 136 |
| Msa1328690 | AT2G37620.3 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 1.11e-35 | 136 |
| Msa1328690 | AT2G37620.2 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 1.11e-35 | 136 |
| Msa1328690 | AT2G37620.4 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 1.11e-35 | 136 |
| Msa1328690 | AT1G49240.1 | 30.034 | 293 | 178 | 10 | 164 | 446 | 91 | 366 | 3.14e-34 | 132 |
| Msa1328690 | AT3G18780.2 | 29.866 | 298 | 172 | 11 | 164 | 446 | 91 | 366 | 3.54e-34 | 132 |
| Msa1328690 | AT3G18780.3 | 29.866 | 298 | 172 | 11 | 164 | 446 | 91 | 366 | 3.54e-34 | 132 |
| Msa1328690 | AT3G46520.2 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 7.01e-34 | 131 |
| Msa1328690 | AT3G46520.1 | 30.375 | 293 | 177 | 10 | 164 | 446 | 91 | 366 | 7.01e-34 | 131 |
| Msa1328690 | AT2G42170.1 | 28.763 | 299 | 181 | 10 | 161 | 448 | 43 | 320 | 1.41e-33 | 129 |
| Msa1328690 | AT2G42170.3 | 28.763 | 299 | 181 | 10 | 161 | 448 | 43 | 320 | 1.41e-33 | 129 |
| Msa1328690 | AT5G59370.2 | 30.034 | 293 | 178 | 10 | 164 | 446 | 91 | 366 | 2.48e-33 | 129 |
| Msa1328690 | AT5G59370.1 | 30.034 | 293 | 178 | 10 | 164 | 446 | 91 | 366 | 2.48e-33 | 129 |
| Msa1328690 | AT3G18780.1 | 30.175 | 285 | 163 | 10 | 164 | 433 | 91 | 354 | 5.23e-33 | 128 |
| Msa1328690 | AT2G42170.4 | 28.873 | 284 | 171 | 9 | 161 | 433 | 43 | 306 | 3.02e-31 | 122 |
| Msa1328690 | AT2G42170.2 | 28.873 | 284 | 171 | 9 | 161 | 433 | 43 | 306 | 3.02e-31 | 122 |
| Msa1328690 | AT2G42170.5 | 30.493 | 223 | 134 | 7 | 234 | 446 | 9 | 220 | 3.19e-26 | 106 |
| Msa1328690 | AT3G27000.1 | 25.497 | 302 | 192 | 11 | 166 | 448 | 92 | 379 | 2.97e-21 | 95.5 |
| Msa1328690 | AT1G13180.1 | 24.126 | 286 | 174 | 12 | 196 | 446 | 134 | 411 | 5.38e-12 | 67.8 |
Find 123 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACTAAAGGAAGCAAATT+TGG | 0.188442 | 8_4:-46644803 | Msa1328690:three_prime_UTR |
| GGTTCTGGATATTGCAAATT+TGG | 0.188453 | 8_4:-46649773 | Msa1328690:CDS |
| GAATTTGGTTTGCAGGAATT+TGG | 0.205364 | 8_4:-46649453 | Msa1328690:intron |
| GGTGTGGAGGTTGTTGGGCT+TGG | 0.218679 | 8_4:-46646679 | Msa1328690:CDS |
| TAATGTGTATTATTGGTTAT+TGG | 0.220714 | 8_4:-46644876 | Msa1328690:three_prime_UTR |
| AGAGTTGCTAAGATTTAATT+AGG | 0.224402 | 8_4:+46650555 | None:intergenic |
| CAGAGCTTGGCAGCATGTTT+AGG | 0.229438 | 8_4:+46650309 | None:intergenic |
| GACTCAGTAATGTGTATTAT+TGG | 0.233729 | 8_4:-46644883 | Msa1328690:three_prime_UTR |
| TTGTTCCAGCCACGTCTTGC+TGG | 0.245568 | 8_4:-46646239 | Msa1328690:CDS |
| CTGATTCCATTTGACATATA+AGG | 0.264725 | 8_4:+46645505 | None:intergenic |
| TGTTATTGTGTAGGTGGTTC+TGG | 0.267288 | 8_4:-46649788 | Msa1328690:intron |
| TTGCTGATAAGAAGCCTTAT+AGG | 0.270240 | 8_4:-46645033 | Msa1328690:three_prime_UTR |
| TTCGGTTGAGTTTAGACTTC+TGG | 0.270240 | 8_4:+46645165 | None:intergenic |
| ATACAAACTGGATGCCTATA+AGG | 0.312487 | 8_4:+46645019 | None:intergenic |
| CTTGGAGCACTAAAACTTAC+AGG | 0.316873 | 8_4:-46646661 | Msa1328690:CDS |
| TTTGCTCAAATCACCATATT+CGG | 0.322966 | 8_4:+46645147 | None:intergenic |
| AGTCTAAACTCAACCGAATA+TGG | 0.325026 | 8_4:-46645160 | Msa1328690:CDS |
| TATGCTGCAAATCAAACTTC+TGG | 0.329129 | 8_4:-46647567 | Msa1328690:CDS |
| AGAGCTTGGCAGCATGTTTA+GGG | 0.337411 | 8_4:+46650310 | None:intergenic |
| AAGCTGCTGTCTTGATGCTT+TGG | 0.341077 | 8_4:+46648120 | None:intergenic |
| AGGAGATAATCTTACCAAAA+AGG | 0.344075 | 8_4:+46649712 | None:intergenic |
| GTTTAAGACTGTTGTCTTAT+CGG | 0.358726 | 8_4:-46645723 | Msa1328690:CDS |
| TCTGGAATAGCTGTTAATAT+AGG | 0.362153 | 8_4:-46647549 | Msa1328690:CDS |
| ACAACAACCGCTTGAGAACT+TGG | 0.367770 | 8_4:+46649149 | None:intergenic |
| TGGTTTGGTGCAAAGCTTAT+TGG | 0.372016 | 8_4:-46645448 | Msa1328690:CDS |
| ATCACACCATCATCATCCTT+TGG | 0.372810 | 8_4:-46650388 | Msa1328690:CDS |
| TCTTGATGCTTTGGCTGATT+CGG | 0.373600 | 8_4:+46648129 | None:intergenic |
| TCAGAAACTAATTTAACTTC+TGG | 0.375922 | 8_4:-46650186 | Msa1328690:CDS |
| GAGTTGAGTTGAGTTGATTA+TGG | 0.377876 | 8_4:-46650517 | Msa1328690:exon |
| AAACTAAAGGAAGCAAATTT+GGG | 0.385998 | 8_4:-46644802 | Msa1328690:three_prime_UTR |
| AGAATAGAGTGAAAGTGTAT+AGG | 0.386087 | 8_4:+46650213 | None:intergenic |
| GGAGGAGGAGTTTGTGTTGG+TGG | 0.388870 | 8_4:+46650437 | None:intergenic |
| TCACACCATCATCATCCTTT+GGG | 0.395955 | 8_4:-46650387 | Msa1328690:CDS |
| ATAGTGGCGGTGGCGGGTAG+TGG | 0.397187 | 8_4:-46650606 | Msa1328690:five_prime_UTR |
| TGTTCCAGCCACGTCTTGCT+GGG | 0.399148 | 8_4:-46646238 | Msa1328690:CDS |
| AGGTGGGTGTGGAGGTTGTT+GGG | 0.401970 | 8_4:-46646684 | Msa1328690:CDS |
| TTTAAGACTGTTGTCTTATC+GGG | 0.405531 | 8_4:-46645722 | Msa1328690:CDS |
| TGTCGAAGCCTAGTATATAT+TGG | 0.407667 | 8_4:+46649417 | None:intergenic |
| TTTAAAGCATTTGTTACTAA+AGG | 0.412143 | 8_4:+46645068 | None:intergenic |
| CTTCCACCTTATATGTCAAA+TGG | 0.419636 | 8_4:-46645511 | Msa1328690:CDS |
| TAACCATCATAGTGGCATAA+TGG | 0.420512 | 8_4:+46649119 | None:intergenic |
| GGAGGGTCTGCATGTTTACC+AGG | 0.423295 | 8_4:-46645701 | Msa1328690:CDS |
| AATTAGCAAGTGGCAGTGAT+TGG | 0.430589 | 8_4:-46645745 | Msa1328690:CDS |
| AAGGTGGGTGTGGAGGTTGT+TGG | 0.433202 | 8_4:-46646685 | Msa1328690:CDS |
| TCAAAGGAGCGGTTTCAAAC+AGG | 0.459948 | 8_4:-46646269 | Msa1328690:CDS |
| CTGGATATTGCAAATTTGGA+TGG | 0.460239 | 8_4:-46649769 | Msa1328690:CDS |
| TTGCTTCTTTGTTATGCACC+AGG | 0.461581 | 8_4:+46645193 | None:intergenic |
| CACCGTTCGCACACTGAAAG+AGG | 0.470195 | 8_4:-46646587 | Msa1328690:intron |
| GGAGGAGTTTGTGTTGGTGG+TGG | 0.472738 | 8_4:+46650440 | None:intergenic |
| TGCTGTTTGTGCTCTCAACC+AGG | 0.473178 | 8_4:-46648056 | Msa1328690:intron |
| TAGCTCAGCTTCATAGTCAT+AGG | 0.474195 | 8_4:+46646343 | None:intergenic |
| TTGTCTCAGATAACGAACTC+TGG | 0.475910 | 8_4:-46650260 | Msa1328690:CDS |
| GCATCATTTGAAGCCGTTGA+AGG | 0.476455 | 8_4:-46646305 | Msa1328690:CDS |
| TTGCCATTATGCCACTATGA+TGG | 0.486558 | 8_4:-46649122 | Msa1328690:intron |
| GCATGTTTACCAGGGTTAGC+AGG | 0.487442 | 8_4:-46645692 | Msa1328690:intron |
| AGCAAAGAGGATCGTCCATT+GGG | 0.490700 | 8_4:-46649746 | Msa1328690:CDS |
| TGGAAACGCCAATATATACT+AGG | 0.492118 | 8_4:-46649425 | Msa1328690:CDS |
| GTATCTGCACCGTGTGGAGG+AGG | 0.492978 | 8_4:+46645475 | None:intergenic |
| GGGACAAATAGTGGCGGTGG+CGG | 0.494229 | 8_4:-46650613 | None:intergenic |
| GGACAAATAGTGGCGGTGGC+GGG | 0.496834 | 8_4:-46650612 | None:intergenic |
| CTTGCAAACGAGGCAGAGCT+TGG | 0.504551 | 8_4:+46650296 | None:intergenic |
| CCATGCCATAGCTCTCTGTA+TGG | 0.504884 | 8_4:-46645786 | Msa1328690:CDS |
| TGCTTCTTTGTTATGCACCA+GGG | 0.505611 | 8_4:+46645194 | None:intergenic |
| GGTGGCGGGTAGTGGGTCAA+TGG | 0.506354 | 8_4:-46650598 | Msa1328690:five_prime_UTR |
| GAGCAAAGAGGATCGTCCAT+TGG | 0.508028 | 8_4:-46649747 | Msa1328690:CDS |
| TAGAGTGAAAGTGTATAGGC+TGG | 0.508039 | 8_4:+46650217 | None:intergenic |
| TAGTGGCGGTGGCGGGTAGT+GGG | 0.513418 | 8_4:-46650605 | Msa1328690:five_prime_UTR |
| CCAGTTTGTATAGAATGAAA+AGG | 0.521043 | 8_4:-46645007 | Msa1328690:three_prime_UTR |
| TTTATGATTACTTACGGAAG+AGG | 0.522747 | 8_4:+46650159 | None:intergenic |
| GTTGGAGGAGGAGTTTGTGT+TGG | 0.527955 | 8_4:+46650434 | None:intergenic |
| TTTGCAGGAATTTGGTAATG+TGG | 0.530792 | 8_4:-46649445 | Msa1328690:intron |
| CATCATTTGAAGCCGTTGAA+GGG | 0.539680 | 8_4:-46646304 | Msa1328690:CDS |
| GAGTGTAAACTTCCCTTCAA+CGG | 0.540008 | 8_4:+46646292 | None:intergenic |
| TCTGCCTCGTTTGCAAGTCA+TGG | 0.542459 | 8_4:-46650290 | Msa1328690:CDS |
| TCTGATAATACATCAGCTTG+TGG | 0.545675 | 8_4:+46644916 | None:intergenic |
| TTGTTGTTTCTGCAGGATGA+AGG | 0.547264 | 8_4:-46649177 | Msa1328690:intron |
| ATAAACCCAAAGGATGATGA+TGG | 0.554666 | 8_4:+46650382 | None:intergenic |
| AAGATTGACGGAGAAACTAA+AGG | 0.555969 | 8_4:-46644815 | Msa1328690:three_prime_UTR |
| AGTGATGCGAAAGGTGGGTG+TGG | 0.556753 | 8_4:-46646695 | Msa1328690:CDS |
| AAGGTAGCAATTCGTCCCAA+TGG | 0.561399 | 8_4:+46649731 | None:intergenic |
| TGCTGATGAAGAGTTGGAGG+AGG | 0.561891 | 8_4:+46650422 | None:intergenic |
| AAGACTGTTGTCTTATCGGG+AGG | 0.562959 | 8_4:-46645719 | Msa1328690:CDS |
| TGATGATGCTGATGAAGAGT+TGG | 0.563191 | 8_4:+46650416 | None:intergenic |
| TGATGCTGATGAAGAGTTGG+AGG | 0.565072 | 8_4:+46650419 | None:intergenic |
| TTATGATTACTTACGGAAGA+GGG | 0.565747 | 8_4:+46650160 | None:intergenic |
| TACCTCTTTCAGTGTGCGAA+CGG | 0.567021 | 8_4:+46646585 | None:intergenic |
| AGACTGTTGTCTTATCGGGA+GGG | 0.569265 | 8_4:-46645718 | Msa1328690:CDS |
| GGTGCAGATACTGCATGGTT+TGG | 0.569726 | 8_4:-46645463 | Msa1328690:CDS |
| ATTCCATTTGACATATAAGG+TGG | 0.570415 | 8_4:+46645508 | None:intergenic |
| TGTCTCAGATAACGAACTCT+GGG | 0.570990 | 8_4:-46650259 | Msa1328690:CDS |
| AGGGAAGTTTACACTCTCAA+AGG | 0.574977 | 8_4:-46646285 | Msa1328690:CDS |
| ACATTAACTAACCATCATAG+TGG | 0.584951 | 8_4:+46649111 | None:intergenic |
| TGGTAAAGTGATGCGAAAGG+TGG | 0.585736 | 8_4:-46646701 | Msa1328690:CDS |
| ATTGGGACAAATAGTGGCGG+TGG | 0.586398 | 8_4:-46650616 | None:intergenic |
| TGGTTGAGAGCACAAACAGC+AGG | 0.587707 | 8_4:+46648058 | None:intergenic |
| GTTCCAGCCACGTCTTGCTG+GGG | 0.590663 | 8_4:-46646237 | Msa1328690:CDS |
| GCAGTATCTGCACCGTGTGG+AGG | 0.600623 | 8_4:+46645472 | None:intergenic |
| CAAATTTGGATGGAGCAAAG+AGG | 0.606757 | 8_4:-46649759 | Msa1328690:CDS |
| CTAATTCTGCAGAATGACAA+TGG | 0.607049 | 8_4:+46645762 | None:intergenic |
| TACTTCAGAGAGGTTAGAGA+AGG | 0.607073 | 8_4:-46645548 | Msa1328690:intron |
| ATGGTCCATACAGAGAGCTA+TGG | 0.609311 | 8_4:+46645781 | None:intergenic |
| AAATGGTAAAGTGATGCGAA+AGG | 0.611089 | 8_4:-46646704 | Msa1328690:CDS |
| AATAATACACATTACTGAGT+CGG | 0.612263 | 8_4:+46644885 | None:intergenic |
| TATCTGCACCGTGTGGAGGA+GGG | 0.612373 | 8_4:+46645476 | None:intergenic |
| GGTAAAGTGATGCGAAAGGT+GGG | 0.612613 | 8_4:-46646700 | Msa1328690:CDS |
| CATTCTGCAGAATTAGCAAG+TGG | 0.616376 | 8_4:-46645755 | Msa1328690:CDS |
| GCTTCTTTGTTATGCACCAG+GGG | 0.622461 | 8_4:+46645195 | None:intergenic |
| ATCGCCATGACTTGCAAACG+AGG | 0.623836 | 8_4:+46650286 | None:intergenic |
| CACACGGTGCAGATACTGCA+TGG | 0.632974 | 8_4:-46645468 | Msa1328690:CDS |
| GGAAGTTTACCTGCTAACCC+TGG | 0.636739 | 8_4:+46645683 | None:intergenic |
| GATGCGAAAGGTGGGTGTGG+AGG | 0.643554 | 8_4:-46646692 | Msa1328690:CDS |
| CCATACAGAGAGCTATGGCA+TGG | 0.645435 | 8_4:+46645786 | None:intergenic |
| GGTTGAGTTTAGACTTCTGG+CGG | 0.646309 | 8_4:+46645168 | None:intergenic |
| GAGGGTCTGCATGTTTACCA+GGG | 0.648864 | 8_4:-46645700 | Msa1328690:CDS |
| CTTCTTTGTTATGCACCAGG+GGG | 0.651797 | 8_4:+46645196 | None:intergenic |
| GGTGAAACCAAGTTCTCAAG+CGG | 0.653510 | 8_4:-46649156 | Msa1328690:CDS |
| GTACTAACACATTATTAACA+TGG | 0.654050 | 8_4:+46644954 | None:intergenic |
| AGTGAGTCAAATAAACCCAA+AGG | 0.667000 | 8_4:+46650372 | None:intergenic |
| ACTTACACCCCAGCAAGACG+TGG | 0.667174 | 8_4:+46646230 | None:intergenic |
| AGTTTACACTCTCAAAGGAG+CGG | 0.669684 | 8_4:-46646280 | Msa1328690:CDS |
| AGAGTCATCCCTCCTCCACA+CGG | 0.670384 | 8_4:-46645484 | Msa1328690:CDS |
| CATGCAGTATCTGCACCGTG+TGG | 0.712978 | 8_4:+46645469 | None:intergenic |
| TGTATTGGGACAAATAGTGG+CGG | 0.722035 | 8_4:-46650619 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAATTTTTTTTGGAA+AGG | - | chr8_4:46645762-46645781 | Msa1328690:CDS | 10.0% |
| !! | TAAAAATCTTAATGATATAT+GGG | + | chr8_4:46649819-46649838 | None:intergenic | 10.0% |
| !! | TTAAAAATCTTAATGATATA+TGG | + | chr8_4:46649820-46649839 | None:intergenic | 10.0% |
| !!! | TGTTATTTATTTTGCTTTAA+TGG | - | chr8_4:46645904-46645923 | Msa1328690:intron | 15.0% |
| !!! | TTGAATTTAAAGTTTCTATT+AGG | - | chr8_4:46646915-46646934 | Msa1328690:intron | 15.0% |
| !!! | TTTTAACTCACAATTTTTTT+TGG | - | chr8_4:46646984-46647003 | Msa1328690:intron | 15.0% |
| !! | ATAATTAGAAAAGACATAAA+TGG | - | chr8_4:46647492-46647511 | Msa1328690:intron | 15.0% |
| !!! | TAAATAATTTTAGGAGAATA+CGG | + | chr8_4:46647576-46647595 | None:intergenic | 15.0% |
| !!! | GATTTGAACTAAATAATTTT+AGG | + | chr8_4:46647585-46647604 | None:intergenic | 15.0% |
| !! | ATATATTGTTAAGCATAATA+AGG | + | chr8_4:46647944-46647963 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTGTTGGAATA+AGG | - | chr8_4:46649362-46649381 | Msa1328690:intron | 15.0% |
| !! | GAAAATATAAACAAATAAGA+TGG | + | chr8_4:46649549-46649568 | None:intergenic | 15.0% |
| !! | ATAACAAAATGTGATAAATA+TGG | + | chr8_4:46649581-46649600 | None:intergenic | 15.0% |
| !!! | TATTTATCACATTTTGTTAT+AGG | - | chr8_4:46649581-46649600 | Msa1328690:intron | 15.0% |
| !! | TGTAACTTTATGATTACTTA+CGG | + | chr8_4:46645257-46645276 | None:intergenic | 20.0% |
| !! | TACTTTACTTAGTTTATGTT+TGG | - | chr8_4:46645459-46645478 | Msa1328690:CDS | 20.0% |
| !! | AAAATTAAGAAGTTAGACAA+AGG | + | chr8_4:46645748-46645767 | None:intergenic | 20.0% |
| !!! | GTAATTGTGATTTTCAAATA+TGG | + | chr8_4:46646330-46646349 | None:intergenic | 20.0% |
| !!! | TATTTTGAAAGACCAATTTA+GGG | - | chr8_4:46646483-46646502 | Msa1328690:intron | 20.0% |
| !! | TTAACTCTTAAGAACTAATT+TGG | - | chr8_4:46646552-46646571 | Msa1328690:intron | 20.0% |
| !!! | TGAAATCTGAGTAATTTTTT+TGG | - | chr8_4:46646585-46646604 | Msa1328690:intron | 20.0% |
| !!! | ATATTTATCAACATTGGTTA+AGG | + | chr8_4:46646631-46646650 | None:intergenic | 20.0% |
| !!! | TTTCAATTTTACTGTTATGA+AGG | + | chr8_4:46646688-46646707 | None:intergenic | 20.0% |
| !! | AACCTATGATAAATAAGATT+TGG | - | chr8_4:46647420-46647439 | Msa1328690:intron | 20.0% |
| !!! | ATCCAAATCTTATTTATCAT+AGG | + | chr8_4:46647425-46647444 | None:intergenic | 20.0% |
| !! | AAATTAAACAACAAAGAGAA+TGG | + | chr8_4:46647470-46647489 | None:intergenic | 20.0% |
| !! | AGAAAATAGCAAATTTAGAA+AGG | - | chr8_4:46647664-46647683 | Msa1328690:intron | 20.0% |
| !! | AATCGAAAACAAATAAGTTA+AGG | + | chr8_4:46647784-46647803 | None:intergenic | 20.0% |
| !!! | TTTGTGAAATTTTGTAATGT+AGG | - | chr8_4:46647803-46647822 | Msa1328690:intron | 20.0% |
| !! | AAATTAGTTGCAAGATAAAT+AGG | + | chr8_4:46648177-46648196 | None:intergenic | 20.0% |
| !!! | TTTGTAATTTTGATTCGTTT+AGG | - | chr8_4:46648451-46648470 | Msa1328690:intron | 20.0% |
| !!! | TTGTAATTTTGATTCGTTTA+GGG | - | chr8_4:46648452-46648471 | Msa1328690:intron | 20.0% |
| !!! | TGTTGATTTACAGTTTTAAA+TGG | - | chr8_4:46648686-46648705 | Msa1328690:intron | 20.0% |
| !! | TTAAATAAATAAGCGATGTA+GGG | + | chr8_4:46648924-46648943 | None:intergenic | 20.0% |
| !! | CTTAGAAAAAAGCAAATATT+GGG | + | chr8_4:46648975-46648994 | None:intergenic | 20.0% |
| !!! | AAACCATTTTCTATAATTAG+TGG | - | chr8_4:46649337-46649356 | Msa1328690:intron | 20.0% |
| !!! | AAAGTTGTAGAGTTTAAAAT+TGG | + | chr8_4:46649396-46649415 | None:intergenic | 20.0% |
| !! | ATATAAATACTGTATGGTTT+AGG | + | chr8_4:46649465-46649484 | None:intergenic | 20.0% |
| !! | CATATCATATAAATACTGTA+TGG | + | chr8_4:46649471-46649490 | None:intergenic | 20.0% |
| !! | CATACAGTATTTATATGATA+TGG | - | chr8_4:46649469-46649488 | Msa1328690:intron | 20.0% |
| !! | TATAAACAAATAAGATGGAA+TGG | + | chr8_4:46649544-46649563 | None:intergenic | 20.0% |
| !!! | GAAAAGTGTCAAAATAAAAA+GGG | + | chr8_4:46649748-46649767 | None:intergenic | 20.0% |
| !!! | TTTAAAGCATTTGTTACTAA+AGG | + | chr8_4:46650342-46650361 | None:intergenic | 20.0% |
| !!! | TAATGTGTATTATTGGTTAT+TGG | - | chr8_4:46650531-46650550 | Msa1328690:five_prime_UTR | 20.0% |
| !!! | AGTTTTTTTATATTCTCAGT+TGG | + | chr8_4:46650567-46650586 | None:intergenic | 20.0% |
| !! | AAAAACTAAGAAAAGATTGA+CGG | - | chr8_4:46650580-46650599 | Msa1328690:five_prime_UTR | 20.0% |
| ! | AGAGTTGCTAAGATTTAATT+AGG | + | chr8_4:46644855-46644874 | None:intergenic | 25.0% |
| !! | TCAGAAACTAATTTAACTTC+TGG | - | chr8_4:46645221-46645240 | Msa1328690:intron | 25.0% |
| !!! | ACTAACTTGTGTTGTTTAAT+TGG | - | chr8_4:46645284-46645303 | Msa1328690:intron | 25.0% |
| ! | AAGTATCTAAATTACCACTA+TGG | + | chr8_4:46645517-46645536 | None:intergenic | 25.0% |
| !!! | TAGTTTGTTTGTTATTGTGT+AGG | - | chr8_4:46645610-46645629 | Msa1328690:intron | 25.0% |
| ! | ATGATAAAATCAGTAACTTG+TGG | - | chr8_4:46645822-46645841 | Msa1328690:intron | 25.0% |
| ! | CAGAAAACACATAACTAAAA+GGG | + | chr8_4:46645932-46645951 | None:intergenic | 25.0% |
| !!! | CTTTTAGTTATGTGTTTTCT+GGG | - | chr8_4:46645931-46645950 | Msa1328690:intron | 25.0% |
| !!! | TTTTAGTTATGTGTTTTCTG+GGG | - | chr8_4:46645932-46645951 | Msa1328690:intron | 25.0% |
| ! | TTCATATTTGCACAAATCAT+CGG | + | chr8_4:46646093-46646112 | None:intergenic | 25.0% |
| ! | AAATTCTATGTCTAATGGAA+AGG | - | chr8_4:46646199-46646218 | Msa1328690:intron | 25.0% |
| !! | TTGTGATTTTCAAATATGGA+GGG | + | chr8_4:46646326-46646345 | None:intergenic | 25.0% |
| !! | ATTGTGATTTTCAAATATGG+AGG | + | chr8_4:46646327-46646346 | None:intergenic | 25.0% |
| ! | ACTTGAGAAATTAGATCTTT+AGG | - | chr8_4:46646415-46646434 | Msa1328690:intron | 25.0% |
| ! | CTTGAGAAATTAGATCTTTA+GGG | - | chr8_4:46646416-46646435 | Msa1328690:intron | 25.0% |
| !! | TAATTTGGTGACAAATTCTT+TGG | - | chr8_4:46646441-46646460 | Msa1328690:intron | 25.0% |
| !! | AATTCTTTGGAGAAATAATG+CGG | - | chr8_4:46646454-46646473 | Msa1328690:intron | 25.0% |
| !!! | CTATTTTGAAAGACCAATTT+AGG | - | chr8_4:46646482-46646501 | Msa1328690:intron | 25.0% |
| !!! | ATTTTGAAAGACCAATTTAG+GGG | - | chr8_4:46646484-46646503 | Msa1328690:intron | 25.0% |
| !! | AGCATTTTCATTTATCAACT+GGG | + | chr8_4:46646654-46646673 | None:intergenic | 25.0% |
| !! | AAGCATTTTCATTTATCAAC+TGG | + | chr8_4:46646655-46646674 | None:intergenic | 25.0% |
| !!! | AGTTGATAAATGAAAATGCT+TGG | - | chr8_4:46646654-46646673 | Msa1328690:CDS | 25.0% |
| ! | GTATGCAATATGATTATTTG+TGG | - | chr8_4:46646758-46646777 | Msa1328690:intron | 25.0% |
| ! | ATATGATTATTTGTGGTGTT+TGG | - | chr8_4:46646765-46646784 | Msa1328690:intron | 25.0% |
| !!! | CTTCAAATACTTTTTGTAGA+AGG | + | chr8_4:46647146-46647165 | None:intergenic | 25.0% |
| !!! | CTTCTACAAAAAGTATTTGA+AGG | - | chr8_4:46647144-46647163 | Msa1328690:intron | 25.0% |
| ! | ATCATAGGTTAAAAGTTAAG+CGG | + | chr8_4:46647410-46647429 | None:intergenic | 25.0% |
| !! | GAAAAGACATAAATGGATTT+AGG | - | chr8_4:46647499-46647518 | Msa1328690:intron | 25.0% |
| ! | GCAAAATCATAAAACATACT+TGG | + | chr8_4:46647906-46647925 | None:intergenic | 25.0% |
| ! | TTCTGTTGAATACTGATATT+TGG | - | chr8_4:46648048-46648067 | Msa1328690:intron | 25.0% |
| ! | ACAAACAAAATACACATTTG+AGG | + | chr8_4:46648331-46648350 | None:intergenic | 25.0% |
| ! | AATGCATATATGCTCAATAA+GGG | + | chr8_4:46648667-46648686 | None:intergenic | 25.0% |
| ! | TAAATAAATAAGCGATGTAG+GGG | + | chr8_4:46648923-46648942 | None:intergenic | 25.0% |
| ! | CTTAAATAAATAAGCGATGT+AGG | + | chr8_4:46648925-46648944 | None:intergenic | 25.0% |
| ! | GCTTAGAAAAAAGCAAATAT+TGG | + | chr8_4:46648976-46648995 | None:intergenic | 25.0% |
| ! | ATGCCACTAATTATAGAAAA+TGG | + | chr8_4:46649343-46649362 | None:intergenic | 25.0% |
| !!! | AGTGGCATTTTTTATATTGT+TGG | - | chr8_4:46649355-46649374 | Msa1328690:intron | 25.0% |
| !! | CAACTTTTGTAATATTCTTC+TGG | - | chr8_4:46649409-46649428 | Msa1328690:CDS | 25.0% |
| !!! | CGAAAAGTGTCAAAATAAAA+AGG | + | chr8_4:46649749-46649768 | None:intergenic | 25.0% |
| ! | AATCTTAATGATATATGGGT+GGG | + | chr8_4:46649815-46649834 | None:intergenic | 25.0% |
| ! | AAATCTTAATGATATATGGG+TGG | + | chr8_4:46649816-46649835 | None:intergenic | 25.0% |
| !! | AGTCAAATCGTTTTATACAA+AGG | + | chr8_4:46650078-46650097 | None:intergenic | 25.0% |
| ! | GTACTAACACATTATTAACA+TGG | + | chr8_4:46650456-46650475 | None:intergenic | 25.0% |
| ! | AATAATACACATTACTGAGT+CGG | + | chr8_4:46650525-46650544 | None:intergenic | 25.0% |
| ! | AAACTAAAGGAAGCAAATTT+GGG | - | chr8_4:46650605-46650624 | Msa1328690:five_prime_UTR | 25.0% |
| !! | TTTTAAGGAGTATATCAGGA+GGG | + | chr8_4:46645061-46645080 | None:intergenic | 30.0% |
| !! | ATTTTAAGGAGTATATCAGG+AGG | + | chr8_4:46645062-46645081 | None:intergenic | 30.0% |
| !! | GTGATTTTAAGGAGTATATC+AGG | + | chr8_4:46645065-46645084 | None:intergenic | 30.0% |
| ! | CTAATAGTCGTGTGATTTTA+AGG | + | chr8_4:46645076-46645095 | None:intergenic | 30.0% |
| ! | AGAATAGAGTGAAAGTGTAT+AGG | + | chr8_4:46645197-46645216 | None:intergenic | 30.0% |
| TTATGATTACTTACGGAAGA+GGG | + | chr8_4:46645250-46645269 | None:intergenic | 30.0% | |
| TTTATGATTACTTACGGAAG+AGG | + | chr8_4:46645251-46645270 | None:intergenic | 30.0% | |
| !!! | ATGTTGTTTTTAACTGCAGT+TGG | - | chr8_4:46645578-46645597 | Msa1328690:intron | 30.0% |
| !! | TTTGTTTGTTATTGTGTAGG+TGG | - | chr8_4:46645613-46645632 | Msa1328690:intron | 30.0% |
| AGGAGATAATCTTACCAAAA+AGG | + | chr8_4:46645698-46645717 | None:intergenic | 30.0% | |
| ! | TTTTGGTAAGATTATCTCCT+TGG | - | chr8_4:46645698-46645717 | Msa1328690:CDS | 30.0% |
| CCAGAAAACACATAACTAAA+AGG | + | chr8_4:46645933-46645952 | None:intergenic | 30.0% | |
| !! | CCTTTTAGTTATGTGTTTTC+TGG | - | chr8_4:46645930-46645949 | Msa1328690:intron | 30.0% |
| AAATTGCTTCATCAACAAGA+AGG | + | chr8_4:46646062-46646081 | None:intergenic | 30.0% | |
| TGAGCAAATTCTATGTCTAA+TGG | - | chr8_4:46646194-46646213 | Msa1328690:intron | 30.0% | |
| ACATTAACTAACCATCATAG+TGG | + | chr8_4:46646299-46646318 | None:intergenic | 30.0% | |
| ! | TAGATCTTTAGGGACTAATT+TGG | - | chr8_4:46646426-46646445 | Msa1328690:intron | 30.0% |
| GTTCTTAAGAGTTAAGAAGA+AGG | + | chr8_4:46646547-46646566 | None:intergenic | 30.0% | |
| ACTGGGATATTTATCAACAT+TGG | + | chr8_4:46646637-46646656 | None:intergenic | 30.0% | |
| TAAGTTTCAACTATAAGCCA+GGG | + | chr8_4:46646725-46646744 | None:intergenic | 30.0% | |
| ATAAGTTTCAACTATAAGCC+AGG | + | chr8_4:46646726-46646745 | None:intergenic | 30.0% | |
| ! | GTAATTTGCACATCAATATG+TGG | + | chr8_4:46646803-46646822 | None:intergenic | 30.0% |
| !! | AAACTTTAGAGTCTAGACAA+TGG | + | chr8_4:46647063-46647082 | None:intergenic | 30.0% |
| GACAGTATAATATGATTCAG+TGG | - | chr8_4:46647108-46647127 | Msa1328690:intron | 30.0% | |
| AGTATAATATGATTCAGTGG+TGG | - | chr8_4:46647111-46647130 | Msa1328690:intron | 30.0% | |
| CATGTGTCAAAACTCAAAAT+CGG | + | chr8_4:46647178-46647197 | None:intergenic | 30.0% | |
| GATTAGTGAGCGTATAATTT+AGG | - | chr8_4:46647615-46647634 | Msa1328690:intron | 30.0% | |
| ! | TTTTGTAATGTAGGCAACTT+TGG | - | chr8_4:46647812-46647831 | Msa1328690:intron | 30.0% |
| ! | TCTGGAATAGCTGTTAATAT+AGG | - | chr8_4:46647858-46647877 | Msa1328690:intron | 30.0% |
| CATGAAATACACCAATTGTT+AGG | - | chr8_4:46647970-46647989 | Msa1328690:intron | 30.0% | |
| ! | GTTTTCACATTCCTAACAAT+TGG | + | chr8_4:46647984-46648003 | None:intergenic | 30.0% |
| GGAATGTGAAAACATTGAAA+AGG | - | chr8_4:46647991-46648010 | Msa1328690:intron | 30.0% | |
| TAGTTGCAAGATAAATAGGA+GGG | + | chr8_4:46648173-46648192 | None:intergenic | 30.0% | |
| TTAGTTGCAAGATAAATAGG+AGG | + | chr8_4:46648174-46648193 | None:intergenic | 30.0% | |
| CTCAAAAGAGAAATTAGTTC+AGG | + | chr8_4:46648232-46648251 | None:intergenic | 30.0% | |
| !! | GTGTATTTTGTTTGTCAGTT+TGG | - | chr8_4:46648336-46648355 | Msa1328690:intron | 30.0% |
| ! | CAAATGTGTCTTTTGTTAGT+TGG | - | chr8_4:46648363-46648382 | Msa1328690:intron | 30.0% |
| ! | TGGTCTTTCATTTGTTAGTT+TGG | - | chr8_4:46648388-46648407 | Msa1328690:intron | 30.0% |
| ! | GTTAATGATAGGGTATTTCT+AGG | + | chr8_4:46648547-46648566 | None:intergenic | 30.0% |
| GATGCAGAATGTTAATGATA+GGG | + | chr8_4:46648557-46648576 | None:intergenic | 30.0% | |
| CTATCATTAACATTCTGCAT+CGG | - | chr8_4:46648556-46648575 | Msa1328690:intron | 30.0% | |
| TATCATTAACATTCTGCATC+GGG | - | chr8_4:46648557-46648576 | Msa1328690:intron | 30.0% | |
| ! | TCGTTTAGGTTATAACACAA+GGG | + | chr8_4:46648608-46648627 | None:intergenic | 30.0% |
| ! | TTCGTTTAGGTTATAACACA+AGG | + | chr8_4:46648609-46648628 | None:intergenic | 30.0% |
| !! | ATAAGCTCATTGATTCGTTT+AGG | + | chr8_4:46648622-46648641 | None:intergenic | 30.0% |
| ATGCATATATGCTCAATAAG+GGG | + | chr8_4:46648666-46648685 | None:intergenic | 30.0% | |
| CAATGCATATATGCTCAATA+AGG | + | chr8_4:46648668-46648687 | None:intergenic | 30.0% | |
| !! | TTGTATTTTTGATGCCACAA+AGG | - | chr8_4:46648875-46648894 | Msa1328690:intron | 30.0% |
| AAAAAAGCAAATATTGGGAC+TGG | + | chr8_4:46648970-46648989 | None:intergenic | 30.0% | |
| ! | TGGTTTGAAATCAGAAAGAA+CGG | + | chr8_4:46649323-46649342 | None:intergenic | 30.0% |
| ! | CTTTTGTAATATTCTTCTGG+AGG | - | chr8_4:46649412-46649431 | Msa1328690:CDS | 30.0% |
| GTGATAAATATGGTTAAGCT+AGG | + | chr8_4:46649571-46649590 | None:intergenic | 30.0% | |
| ! | GTTTAAGACTGTTGTCTTAT+CGG | - | chr8_4:46649684-46649703 | Msa1328690:intron | 30.0% |
| ! | TTTAAGACTGTTGTCTTATC+GGG | - | chr8_4:46649685-46649704 | Msa1328690:intron | 30.0% |
| !! | AAGATTTTTAACTCGACTCT+TGG | - | chr8_4:46649829-46649848 | Msa1328690:intron | 30.0% |
| !! | AGATTTTTAACTCGACTCTT+GGG | - | chr8_4:46649830-46649849 | Msa1328690:intron | 30.0% |
| ATTCCATTTGACATATAAGG+TGG | + | chr8_4:46649902-46649921 | None:intergenic | 30.0% | |
| CTGATTCCATTTGACATATA+AGG | + | chr8_4:46649905-46649924 | None:intergenic | 30.0% | |
| GTGAATGTTTAAGAGTTAAG+TGG | + | chr8_4:46649998-46650017 | None:intergenic | 30.0% | |
| ! | TTTTGTGTCCAGCTTATTTA+TGG | - | chr8_4:46650115-46650134 | Msa1328690:intron | 30.0% |
| TTTGCTCAAATCACCATATT+CGG | + | chr8_4:46650263-46650282 | None:intergenic | 30.0% | |
| ! | CCTTTTCATTCTATACAAAC+TGG | + | chr8_4:46650403-46650422 | None:intergenic | 30.0% |
| CCAGTTTGTATAGAATGAAA+AGG | - | chr8_4:46650400-46650419 | Msa1328690:CDS | 30.0% | |
| GACTCAGTAATGTGTATTAT+TGG | - | chr8_4:46650524-46650543 | Msa1328690:five_prime_UTR | 30.0% | |
| GAAACTAAAGGAAGCAAATT+TGG | - | chr8_4:46650604-46650623 | Msa1328690:five_prime_UTR | 30.0% | |
| !! | GAGTTGAGTTGAGTTGATTA+TGG | - | chr8_4:46644890-46644909 | Msa1328690:three_prime_UTR | 35.0% |
| ATAAACCCAAAGGATGATGA+TGG | + | chr8_4:46645028-46645047 | None:intergenic | 35.0% | |
| AGTGAGTCAAATAAACCCAA+AGG | + | chr8_4:46645038-46645057 | None:intergenic | 35.0% | |
| !!! | GTGTCGTTTAAGCATGTTTT+TGG | - | chr8_4:46645388-46645407 | Msa1328690:intron | 35.0% |
| !!! | TTAAGCATGTTTTTGGTCAC+CGG | - | chr8_4:46645395-46645414 | Msa1328690:intron | 35.0% |
| TAACCATCGATGATAACAGT+GGG | + | chr8_4:46645433-46645452 | None:intergenic | 35.0% | |
| !! | GGTTCTGGATATTGCAAATT+TGG | - | chr8_4:46645634-46645653 | Msa1328690:intron | 35.0% |
| CTGGATATTGCAAATTTGGA+TGG | - | chr8_4:46645638-46645657 | Msa1328690:intron | 35.0% | |
| GATTATCTCCTTGGTTCAAT+AGG | - | chr8_4:46645707-46645726 | Msa1328690:CDS | 35.0% | |
| AGACAAAGGAAGCAATTTGT+GGG | + | chr8_4:46645734-46645753 | None:intergenic | 35.0% | |
| TAGACAAAGGAAGCAATTTG+TGG | + | chr8_4:46645735-46645754 | None:intergenic | 35.0% | |
| !! | TATGTGTTTTCTGGGGAATT+TGG | - | chr8_4:46645939-46645958 | Msa1328690:intron | 35.0% |
| !! | GAATTTGGTTTGCAGGAATT+TGG | - | chr8_4:46645954-46645973 | Msa1328690:intron | 35.0% |
| !! | TTTGCAGGAATTTGGTAATG+TGG | - | chr8_4:46645962-46645981 | Msa1328690:intron | 35.0% |
| TGGAAACGCCAATATATACT+AGG | - | chr8_4:46645982-46646001 | Msa1328690:intron | 35.0% | |
| TGTCGAAGCCTAGTATATAT+TGG | + | chr8_4:46645993-46646012 | None:intergenic | 35.0% | |
| !!! | CATTTTTTCGCAACTGTCTA+TGG | - | chr8_4:46646011-46646030 | Msa1328690:intron | 35.0% |
| ! | ATACAGTAGCAATTGAGTTG+TGG | - | chr8_4:46646128-46646147 | Msa1328690:intron | 35.0% |
| ! | TAGCAATTGAGTTGTGGAAA+GGG | - | chr8_4:46646134-46646153 | Msa1328690:intron | 35.0% |
| TAACCATCATAGTGGCATAA+TGG | + | chr8_4:46646291-46646310 | None:intergenic | 35.0% | |
| TACCATGTATGTCCTTATGT+AGG | + | chr8_4:46646394-46646413 | None:intergenic | 35.0% | |
| !! | ATTTTAGTGAAGCCCATTGA+TGG | - | chr8_4:46646521-46646540 | Msa1328690:intron | 35.0% |
| TTAAGAAGAAGGCCATCAAT+GGG | + | chr8_4:46646536-46646555 | None:intergenic | 35.0% | |
| ! | TTTTTGGATGCATTTCCATG+TGG | - | chr8_4:46646601-46646620 | Msa1328690:CDS | 35.0% |
| CACATCAATATGTGGTTTCT+TGG | + | chr8_4:46646795-46646814 | None:intergenic | 35.0% | |
| ACTTGAAGAAGAAAACTGCA+TGG | + | chr8_4:46646832-46646851 | None:intergenic | 35.0% | |
| ! | GTTTTGCATACATGATCATC+AGG | - | chr8_4:46647079-46647098 | Msa1328690:intron | 35.0% |
| !!! | CGATTTTGAGTTTTGACACA+TGG | - | chr8_4:46647176-46647195 | Msa1328690:intron | 35.0% |
| !! | AACCAGGTAGCATATTTTAG+TGG | - | chr8_4:46647367-46647386 | Msa1328690:intron | 35.0% |
| !!! | ACCAGGTAGCATATTTTAGT+GGG | - | chr8_4:46647368-46647387 | Msa1328690:intron | 35.0% |
| TAAGATTTGGATCTGAGTGT+TGG | - | chr8_4:46647433-46647452 | Msa1328690:intron | 35.0% | |
| TGTGTTAAGGATCAAGATCA+GGG | + | chr8_4:46647550-46647569 | None:intergenic | 35.0% | |
| TATGCTGCAAATCAAACTTC+TGG | - | chr8_4:46647840-46647859 | Msa1328690:intron | 35.0% | |
| AGATAAATAGGAGGGTTCAA+GGG | + | chr8_4:46648165-46648184 | None:intergenic | 35.0% | |
| AAGATAAATAGGAGGGTTCA+AGG | + | chr8_4:46648166-46648185 | None:intergenic | 35.0% | |
| !! | GAGTAGTTAGCTTGTTAGTT+AGG | + | chr8_4:46648202-46648221 | None:intergenic | 35.0% |
| CACACTTTCAAGGAACAAAA+GGG | + | chr8_4:46648262-46648281 | None:intergenic | 35.0% | |
| TCACACTTTCAAGGAACAAA+AGG | + | chr8_4:46648263-46648282 | None:intergenic | 35.0% | |
| !! | TTTTGTTCCTTGAAAGTGTG+AGG | - | chr8_4:46648262-46648281 | Msa1328690:intron | 35.0% |
| ! | GTGTCTTTTGTTAGTTGGTT+TGG | - | chr8_4:46648368-46648387 | Msa1328690:intron | 35.0% |
| TGACATCTCATCACATGTTT+AGG | - | chr8_4:46648480-46648499 | Msa1328690:intron | 35.0% | |
| GACATCTCATCACATGTTTA+GGG | - | chr8_4:46648481-46648500 | Msa1328690:intron | 35.0% | |
| CGATGCAGAATGTTAATGAT+AGG | + | chr8_4:46648558-46648577 | None:intergenic | 35.0% | |
| ! | TTTAGGTTATAACACAAGGG+CGG | + | chr8_4:46648605-46648624 | None:intergenic | 35.0% |
| AAATGGTAAAGTGATGCGAA+AGG | - | chr8_4:46648703-46648722 | Msa1328690:intron | 35.0% | |
| !! | AAGCTGTGTTAAGTTGAATG+TGG | - | chr8_4:46648992-46649011 | Msa1328690:intron | 35.0% |
| !! | TCTGGAGGCATTTAACTAAT+TGG | - | chr8_4:46649427-46649446 | Msa1328690:CDS | 35.0% |
| CTAATTCTGCAGAATGACAA+TGG | + | chr8_4:46649648-46649667 | None:intergenic | 35.0% | |
| TTGCATCTGAGCATATAAAG+TGG | - | chr8_4:46649772-46649791 | Msa1328690:CDS | 35.0% | |
| CTTCCACCTTATATGTCAAA+TGG | - | chr8_4:46649896-46649915 | Msa1328690:intron | 35.0% | |
| ! | TCACATTTTCCTTGCTTCAT+AGG | - | chr8_4:46650014-46650033 | Msa1328690:intron | 35.0% |
| TCATGTCACCATAAATAAGC+TGG | + | chr8_4:46650126-46650145 | None:intergenic | 35.0% | |
| AGTCTAAACTCAACCGAATA+TGG | - | chr8_4:46650247-46650266 | Msa1328690:CDS | 35.0% | |
| ! | TTGCTGATAAGAAGCCTTAT+AGG | - | chr8_4:46650374-46650393 | Msa1328690:CDS | 35.0% |
| ATACAAACTGGATGCCTATA+AGG | + | chr8_4:46650391-46650410 | None:intergenic | 35.0% | |
| TCTGATAATACATCAGCTTG+TGG | + | chr8_4:46650494-46650513 | None:intergenic | 35.0% | |
| AAGATTGACGGAGAAACTAA+AGG | - | chr8_4:46650592-46650611 | Msa1328690:five_prime_UTR | 35.0% | |
| ! | TGATGATGCTGATGAAGAGT+TGG | + | chr8_4:46644994-46645013 | None:intergenic | 40.0% |
| ATCACACCATCATCATCCTT+TGG | - | chr8_4:46645019-46645038 | Msa1328690:three_prime_UTR | 40.0% | |
| TCACACCATCATCATCCTTT+GGG | - | chr8_4:46645020-46645039 | Msa1328690:three_prime_UTR | 40.0% | |
| TTGTCTCAGATAACGAACTC+TGG | - | chr8_4:46645147-46645166 | Msa1328690:exon | 40.0% | |
| TGTCTCAGATAACGAACTCT+GGG | - | chr8_4:46645148-46645167 | Msa1328690:exon | 40.0% | |
| ! | TAGAGTGAAAGTGTATAGGC+TGG | + | chr8_4:46645193-46645212 | None:intergenic | 40.0% |
| !!! | TAAGCATGTTTTTGGTCACC+GGG | - | chr8_4:46645396-46645415 | Msa1328690:intron | 40.0% |
| CTAACCATCGATGATAACAG+TGG | + | chr8_4:46645434-46645453 | None:intergenic | 40.0% | |
| AAAATTACCACGTGCCATAG+TGG | - | chr8_4:46645500-46645519 | Msa1328690:CDS | 40.0% | |
| TAAATTACCACTATGGCACG+TGG | + | chr8_4:46645510-46645529 | None:intergenic | 40.0% | |
| CAAACATTGTCGCACGAAAT+AGG | + | chr8_4:46645544-46645563 | None:intergenic | 40.0% | |
| CGACAATGTTTGTGCTTCAT+AGG | - | chr8_4:46645552-46645571 | Msa1328690:intron | 40.0% | |
| TGTTATTGTGTAGGTGGTTC+TGG | - | chr8_4:46645619-46645638 | Msa1328690:intron | 40.0% | |
| CAAATTTGGATGGAGCAAAG+AGG | - | chr8_4:46645648-46645667 | Msa1328690:intron | 40.0% | |
| ! | GTAGCAATTGAGTTGTGGAA+AGG | - | chr8_4:46646133-46646152 | Msa1328690:intron | 40.0% |
| !! | TGAGTGATTGTTGTTTCTGC+AGG | - | chr8_4:46646223-46646242 | Msa1328690:intron | 40.0% |
| !! | TTGTTGTTTCTGCAGGATGA+AGG | - | chr8_4:46646230-46646249 | Msa1328690:intron | 40.0% |
| TTGCCATTATGCCACTATGA+TGG | - | chr8_4:46646285-46646304 | Msa1328690:CDS | 40.0% | |
| AAACCCTTCAGTCCTACATA+AGG | - | chr8_4:46646379-46646398 | Msa1328690:intron | 40.0% | |
| TGTCCTTATGTAGGACTGAA+GGG | + | chr8_4:46646385-46646404 | None:intergenic | 40.0% | |
| ATGTCCTTATGTAGGACTGA+AGG | + | chr8_4:46646386-46646405 | None:intergenic | 40.0% | |
| GTCCTACATAAGGACATACA+TGG | - | chr8_4:46646389-46646408 | Msa1328690:intron | 40.0% | |
| GACTGAGTAAACCCCTAAAT+TGG | + | chr8_4:46646498-46646517 | None:intergenic | 40.0% | |
| GTTAAGAAGAAGGCCATCAA+TGG | + | chr8_4:46646537-46646556 | None:intergenic | 40.0% | |
| ATTGGTTAAGGTTTGCCACA+TGG | + | chr8_4:46646619-46646638 | None:intergenic | 40.0% | |
| GAAGGAAAGGGATCTCTAAA+TGG | + | chr8_4:46647249-46647268 | None:intergenic | 40.0% | |
| TCTTGATGCTTTGGCTGATT+CGG | + | chr8_4:46647281-46647300 | None:intergenic | 40.0% | |
| TCCCACTAAAATATGCTACC+TGG | + | chr8_4:46647372-46647391 | None:intergenic | 40.0% | |
| !! | TTGGATCTGAGTGTTGGATT+TGG | - | chr8_4:46647439-46647458 | Msa1328690:intron | 40.0% |
| !! | ATCTGAGTGTTGGATTTGGA+GGG | - | chr8_4:46647443-46647462 | Msa1328690:intron | 40.0% |
| ! | ATACTCCTTAAGGAGGTACA+AGG | + | chr8_4:46647526-46647545 | None:intergenic | 40.0% |
| AGATCAGGGAATACTCCTTA+AGG | + | chr8_4:46647536-46647555 | None:intergenic | 40.0% | |
| CTGTGTTAAGGATCAAGATC+AGG | + | chr8_4:46647551-46647570 | None:intergenic | 40.0% | |
| GAGAATACGGAACTGTGTTA+AGG | + | chr8_4:46647563-46647582 | None:intergenic | 40.0% | |
| AACATCACCTCACACTTTCA+AGG | + | chr8_4:46648272-46648291 | None:intergenic | 40.0% | |
| CATATATGCTCAATAAGGGG+AGG | + | chr8_4:46648663-46648682 | None:intergenic | 40.0% | |
| ! | CTTGGAGCACTAAAACTTAC+AGG | - | chr8_4:46648746-46648765 | Msa1328690:intron | 40.0% |
| !! | TTTGATGCCACAAAGGTACT+TGG | - | chr8_4:46648882-46648901 | Msa1328690:intron | 40.0% |
| !! | TTGATGCCACAAAGGTACTT+GGG | - | chr8_4:46648883-46648902 | Msa1328690:intron | 40.0% |
| ! | CATGTAACCAACAAGGTATC+AGG | + | chr8_4:46649021-46649040 | None:intergenic | 40.0% |
| CTGTTCTCATGTAACCAACA+AGG | + | chr8_4:46649028-46649047 | None:intergenic | 40.0% | |
| TAGCTCAGCTTCATAGTCAT+AGG | + | chr8_4:46649067-46649086 | None:intergenic | 40.0% | |
| ! | CATCATTTGAAGCCGTTGAA+GGG | - | chr8_4:46649103-46649122 | Msa1328690:intron | 40.0% |
| GAGTGTAAACTTCCCTTCAA+CGG | + | chr8_4:46649118-46649137 | None:intergenic | 40.0% | |
| AGGGAAGTTTACACTCTCAA+AGG | - | chr8_4:46649122-46649141 | Msa1328690:intron | 40.0% | |
| AGTTTACACTCTCAAAGGAG+CGG | - | chr8_4:46649127-46649146 | Msa1328690:CDS | 40.0% | |
| AACGGAAGTGAAAAGGTAAC+AGG | + | chr8_4:46649305-46649324 | None:intergenic | 40.0% | |
| CAGAAAGAACGGAAGTGAAA+AGG | + | chr8_4:46649312-46649331 | None:intergenic | 40.0% | |
| CATTCTGCAGAATTAGCAAG+TGG | - | chr8_4:46649652-46649671 | Msa1328690:intron | 40.0% | |
| AATTAGCAAGTGGCAGTGAT+TGG | - | chr8_4:46649662-46649681 | Msa1328690:intron | 40.0% | |
| TGGGTTCATATACTTCAGAG+AGG | - | chr8_4:46649849-46649868 | Msa1328690:intron | 40.0% | |
| TACTTCAGAGAGGTTAGAGA+AGG | - | chr8_4:46649859-46649878 | Msa1328690:intron | 40.0% | |
| !! | TGGTTTGGTGCAAAGCTTAT+TGG | - | chr8_4:46649959-46649978 | Msa1328690:intron | 40.0% |
| AAGTGAAGTCCTATGAAGCA+AGG | + | chr8_4:46650026-46650045 | None:intergenic | 40.0% | |
| ACAAACAATCAGCTCTACAG+AGG | + | chr8_4:46650162-46650181 | None:intergenic | 40.0% | |
| ! | TGCTTCTTTGTTATGCACCA+GGG | + | chr8_4:46650216-46650235 | None:intergenic | 40.0% |
| ! | TTGCTTCTTTGTTATGCACC+AGG | + | chr8_4:46650217-46650236 | None:intergenic | 40.0% |
| TTCGGTTGAGTTTAGACTTC+TGG | + | chr8_4:46650245-46650264 | None:intergenic | 40.0% | |
| TGATGCTGATGAAGAGTTGG+AGG | + | chr8_4:46644991-46645010 | None:intergenic | 45.0% | |
| AGAGCTTGGCAGCATGTTTA+GGG | + | chr8_4:46645100-46645119 | None:intergenic | 45.0% | |
| ACATGCTTAAACGACACGTG+TGG | + | chr8_4:46645385-46645404 | None:intergenic | 45.0% | |
| AGCAAAGAGGATCGTCCATT+GGG | - | chr8_4:46645661-46645680 | Msa1328690:intron | 45.0% | |
| AAGGTAGCAATTCGTCCCAA+TGG | + | chr8_4:46645679-46645698 | None:intergenic | 45.0% | |
| ! | GGGACGAATTGCTACCTTTT+TGG | - | chr8_4:46645681-46645700 | Msa1328690:intron | 45.0% |
| TTGTGGGTCCTATTGAACCA+AGG | + | chr8_4:46645718-46645737 | None:intergenic | 45.0% | |
| !! | TTCTGGGGAATTTGGTTTGC+AGG | - | chr8_4:46645947-46645966 | Msa1328690:intron | 45.0% |
| ! | TTTTCGCAACTGTCTATGGC+AGG | - | chr8_4:46646015-46646034 | Msa1328690:intron | 45.0% |
| GGTGAAACCAAGTTCTCAAG+CGG | - | chr8_4:46646251-46646270 | Msa1328690:CDS | 45.0% | |
| ACAACAACCGCTTGAGAACT+TGG | + | chr8_4:46646261-46646280 | None:intergenic | 45.0% | |
| AAAATGTACCATGCAGTCCC+TGG | - | chr8_4:46646705-46646724 | Msa1328690:CDS | 45.0% | |
| TATGTATGTGCCACATACGC+AGG | + | chr8_4:46646888-46646907 | None:intergenic | 45.0% | |
| AAGCTGCTGTCTTGATGCTT+TGG | + | chr8_4:46647290-46647309 | None:intergenic | 45.0% | |
| !! | GATCTGAGTGTTGGATTTGG+AGG | - | chr8_4:46647442-46647461 | Msa1328690:intron | 45.0% |
| TAGGTCCTTGTACCTCCTTA+AGG | - | chr8_4:46647518-46647537 | Msa1328690:intron | 45.0% | |
| TCAGGGAATACTCCTTAAGG+AGG | + | chr8_4:46647533-46647552 | None:intergenic | 45.0% | |
| TGGTAAAGTGATGCGAAAGG+TGG | - | chr8_4:46648706-46648725 | Msa1328690:intron | 45.0% | |
| GGTAAAGTGATGCGAAAGGT+GGG | - | chr8_4:46648707-46648726 | Msa1328690:intron | 45.0% | |
| TACCTCTTTCAGTGTGCGAA+CGG | + | chr8_4:46648825-46648844 | None:intergenic | 45.0% | |
| ! | GCATCATTTGAAGCCGTTGA+AGG | - | chr8_4:46649102-46649121 | Msa1328690:intron | 45.0% |
| TCAAAGGAGCGGTTTCAAAC+AGG | - | chr8_4:46649138-46649157 | Msa1328690:CDS | 45.0% | |
| CAAGCAAAGCTGCTAAAGAG+TGG | + | chr8_4:46649269-46649288 | None:intergenic | 45.0% | |
| ATGGTCCATACAGAGAGCTA+TGG | + | chr8_4:46649629-46649648 | None:intergenic | 45.0% | |
| AAGACTGTTGTCTTATCGGG+AGG | - | chr8_4:46649688-46649707 | Msa1328690:intron | 45.0% | |
| AGACTGTTGTCTTATCGGGA+GGG | - | chr8_4:46649689-46649708 | Msa1328690:intron | 45.0% | |
| ! | CTTCTTTGTTATGCACCAGG+GGG | + | chr8_4:46650214-46650233 | None:intergenic | 45.0% |
| ! | GCTTCTTTGTTATGCACCAG+GGG | + | chr8_4:46650215-46650234 | None:intergenic | 45.0% |
| GGTTGAGTTTAGACTTCTGG+CGG | + | chr8_4:46650242-46650261 | None:intergenic | 45.0% | |
| !!! | TTCTTAATTTTAATTTTTTT+TGG | - | chr8_4:46645757-46645776 | Msa1328690:CDS | 5.0% |
| GTTGGAGGAGGAGTTTGTGT+TGG | + | chr8_4:46644976-46644995 | None:intergenic | 50.0% | |
| TGCTGATGAAGAGTTGGAGG+AGG | + | chr8_4:46644988-46645007 | None:intergenic | 50.0% | |
| CAGAGCTTGGCAGCATGTTT+AGG | + | chr8_4:46645101-46645120 | None:intergenic | 50.0% | |
| TCTGCCTCGTTTGCAAGTCA+TGG | - | chr8_4:46645117-46645136 | Msa1328690:three_prime_UTR | 50.0% | |
| ! | ATCGCCATGACTTGCAAACG+AGG | + | chr8_4:46645124-46645143 | None:intergenic | 50.0% |
| CCATCGATGATAACAGTGGG+AGG | + | chr8_4:46645430-46645449 | None:intergenic | 50.0% | |
| CCTCCCACTGTTATCATCGA+TGG | - | chr8_4:46645427-46645446 | Msa1328690:intron | 50.0% | |
| GAGCAAAGAGGATCGTCCAT+TGG | - | chr8_4:46645660-46645679 | Msa1328690:intron | 50.0% | |
| ACTATAAGCCAGGGACTGCA+TGG | + | chr8_4:46646716-46646735 | None:intergenic | 50.0% | |
| CGGTGTCTGCAAGAAGGAAA+GGG | + | chr8_4:46647261-46647280 | None:intergenic | 50.0% | |
| ! | TCGGTGTCTGCAAGAAGGAA+AGG | + | chr8_4:46647262-46647281 | None:intergenic | 50.0% |
| !! | CTGATTCGGTGTCTGCAAGA+AGG | + | chr8_4:46647267-46647286 | None:intergenic | 50.0% |
| ! | TGGTTGAGAGCACAAACAGC+AGG | + | chr8_4:46647352-46647371 | None:intergenic | 50.0% |
| ! | TGCTGTTTGTGCTCTCAACC+AGG | - | chr8_4:46647351-46647370 | Msa1328690:intron | 50.0% |
| GATTTGAGTGACCAGAGCGA+TGG | + | chr8_4:46648102-46648121 | None:intergenic | 50.0% | |
| TAGGAGGGTTCAAGGGTAGA+GGG | + | chr8_4:46648158-46648177 | None:intergenic | 50.0% | |
| ATAGGAGGGTTCAAGGGTAG+AGG | + | chr8_4:46648159-46648178 | None:intergenic | 50.0% | |
| !! | ATGCCACAAAGGTACTTGGG+AGG | - | chr8_4:46648886-46648905 | Msa1328690:intron | 50.0% |
| TGTCCTCCCAAGTACCTTTG+TGG | + | chr8_4:46648892-46648911 | None:intergenic | 50.0% | |
| GGTACTTGGGAGGACAAAAG+TGG | - | chr8_4:46648896-46648915 | Msa1328690:intron | 50.0% | |
| GTGGTTGCCTGATACCTTGT+TGG | - | chr8_4:46649011-46649030 | Msa1328690:intron | 50.0% | |
| CCATACAGAGAGCTATGGCA+TGG | + | chr8_4:46649624-46649643 | None:intergenic | 50.0% | |
| CCATGCCATAGCTCTCTGTA+TGG | - | chr8_4:46649621-46649640 | Msa1328690:intron | 50.0% | |
| GAGGGTCTGCATGTTTACCA+GGG | - | chr8_4:46649707-46649726 | Msa1328690:intron | 50.0% | |
| ! | GCATGTTTACCAGGGTTAGC+AGG | - | chr8_4:46649715-46649734 | Msa1328690:CDS | 50.0% |
| GGAAGTTTACCTGCTAACCC+TGG | + | chr8_4:46649727-46649746 | None:intergenic | 50.0% | |
| GGTGCAGATACTGCATGGTT+TGG | - | chr8_4:46649944-46649963 | Msa1328690:intron | 50.0% | |
| ! | GGAGGAGTTTGTGTTGGTGG+TGG | + | chr8_4:46644970-46644989 | None:intergenic | 55.0% |
| GGAGGAGGAGTTTGTGTTGG+TGG | + | chr8_4:46644973-46644992 | None:intergenic | 55.0% | |
| CTTGCAAACGAGGCAGAGCT+TGG | + | chr8_4:46645114-46645133 | None:intergenic | 55.0% | |
| TGGCAGGTGCGAGTCATTCT+TGG | - | chr8_4:46646031-46646050 | Msa1328690:intron | 55.0% | |
| AAAGCTCAGAGCCATCGCTC+TGG | - | chr8_4:46648088-46648107 | Msa1328690:CDS | 55.0% | |
| AGGAGGGTTCAAGGGTAGAG+GGG | + | chr8_4:46648157-46648176 | None:intergenic | 55.0% | |
| AGTGATGCGAAAGGTGGGTG+TGG | - | chr8_4:46648712-46648731 | Msa1328690:intron | 55.0% | |
| AAGGTGGGTGTGGAGGTTGT+TGG | - | chr8_4:46648722-46648741 | Msa1328690:intron | 55.0% | |
| AGGTGGGTGTGGAGGTTGTT+GGG | - | chr8_4:46648723-46648742 | Msa1328690:intron | 55.0% | |
| CACCGTTCGCACACTGAAAG+AGG | - | chr8_4:46648820-46648839 | Msa1328690:intron | 55.0% | |
| TTGTTCCAGCCACGTCTTGC+TGG | - | chr8_4:46649168-46649187 | Msa1328690:intron | 55.0% | |
| TGTTCCAGCCACGTCTTGCT+GGG | - | chr8_4:46649169-46649188 | Msa1328690:intron | 55.0% | |
| ACTTACACCCCAGCAAGACG+TGG | + | chr8_4:46649180-46649199 | None:intergenic | 55.0% | |
| GGAGGGTCTGCATGTTTACC+AGG | - | chr8_4:46649706-46649725 | Msa1328690:intron | 55.0% | |
| AGAGTCATCCCTCCTCCACA+CGG | - | chr8_4:46649923-46649942 | Msa1328690:intron | 55.0% | |
| TATCTGCACCGTGTGGAGGA+GGG | + | chr8_4:46649934-46649953 | None:intergenic | 55.0% | |
| CATGCAGTATCTGCACCGTG+TGG | + | chr8_4:46649941-46649960 | None:intergenic | 55.0% | |
| CACACGGTGCAGATACTGCA+TGG | - | chr8_4:46649939-46649958 | Msa1328690:intron | 55.0% | |
| ! | TTTGTTATGCACCAGGGGGC+AGG | + | chr8_4:46650210-46650229 | None:intergenic | 55.0% |
| ATGCTGTGCGCCTGCGTATG+TGG | - | chr8_4:46646875-46646894 | Msa1328690:intron | 60.0% | |
| !! | GCGATGGCTCTGAGCTTTCG+AGG | + | chr8_4:46648086-46648105 | None:intergenic | 60.0% |
| GAGGGTTCAAGGGTAGAGGG+GGG | + | chr8_4:46648155-46648174 | None:intergenic | 60.0% | |
| GGAGGGTTCAAGGGTAGAGG+GGG | + | chr8_4:46648156-46648175 | None:intergenic | 60.0% | |
| GATGCGAAAGGTGGGTGTGG+AGG | - | chr8_4:46648715-46648734 | Msa1328690:intron | 60.0% | |
| GGTGTGGAGGTTGTTGGGCT+TGG | - | chr8_4:46648728-46648747 | Msa1328690:intron | 60.0% | |
| GTTCCAGCCACGTCTTGCTG+GGG | - | chr8_4:46649170-46649189 | Msa1328690:intron | 60.0% | |
| GTATCTGCACCGTGTGGAGG+AGG | + | chr8_4:46649935-46649954 | None:intergenic | 60.0% | |
| GCAGTATCTGCACCGTGTGG+AGG | + | chr8_4:46649938-46649957 | None:intergenic | 60.0% | |
| TGAGTACCTTTCCTGCCCCC+TGG | - | chr8_4:46650196-46650215 | Msa1328690:CDS | 60.0% | |
| TATGCACCAGGGGGCAGGAA+AGG | + | chr8_4:46650205-46650224 | None:intergenic | 60.0% | |
| !! | ATAGTGGCGGTGGCGGGTAG+TGG | - | chr8_4:46644801-46644820 | Msa1328690:three_prime_UTR | 65.0% |
| !! | TAGTGGCGGTGGCGGGTAGT+GGG | - | chr8_4:46644802-46644821 | Msa1328690:three_prime_UTR | 65.0% |
| !! | GGTGGCGGGTAGTGGGTCAA+TGG | - | chr8_4:46644809-46644828 | Msa1328690:three_prime_UTR | 65.0% |
| CAGTGGGAGGAAGTCGCTCC+CGG | + | chr8_4:46645417-46645436 | None:intergenic | 65.0% | |
| ACACCCCAGCAAGACGTGGC+TGG | + | chr8_4:46649176-46649195 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 46644801 | 46650628 | 46644801 | ID=Msa1328690;Name=Msa1328690 |
| chr8_4 | mRNA | 46644801 | 46650628 | 46644801 | ID=Msa1328690-mRNA-1;Parent=Msa1328690;Name=Msa1328690-mRNA-1;_AED=0.17;_eAED=0.17;_QI=108|0.8|0.90|1|0.8|0.90|11|356|454 |
| chr8_4 | exon | 46644801 | 46645234 | 46644801 | ID=Msa1328690-mRNA-1:exon:13341;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46645444 | 46645562 | 46645444 | ID=Msa1328690-mRNA-1:exon:13340;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46645693 | 46645826 | 46645693 | ID=Msa1328690-mRNA-1:exon:13339;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46646236 | 46646381 | 46646236 | ID=Msa1328690-mRNA-1:exon:13338;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46646588 | 46646730 | 46646588 | ID=Msa1328690-mRNA-1:exon:13337;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46647523 | 46647604 | 46647523 | ID=Msa1328690-mRNA-1:exon:13336;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46648057 | 46648154 | 46648057 | ID=Msa1328690-mRNA-1:exon:13335;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46649123 | 46649184 | 46649123 | ID=Msa1328690-mRNA-1:exon:13334;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46649393 | 46649460 | 46649393 | ID=Msa1328690-mRNA-1:exon:13333;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46649710 | 46649797 | 46649710 | ID=Msa1328690-mRNA-1:exon:13332;Parent=Msa1328690-mRNA-1 |
| chr8_4 | exon | 46650174 | 46650628 | 46650174 | ID=Msa1328690-mRNA-1:exon:13331;Parent=Msa1328690-mRNA-1 |
| chr8_4 | five_prime_UTR | 46650521 | 46650628 | 46650521 | ID=Msa1328690-mRNA-1:five_prime_utr;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46650174 | 46650520 | 46650174 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46649710 | 46649797 | 46649710 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46649393 | 46649460 | 46649393 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46649123 | 46649184 | 46649123 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46648057 | 46648154 | 46648057 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46647523 | 46647604 | 46647523 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46646588 | 46646730 | 46646588 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46646236 | 46646381 | 46646236 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46645693 | 46645826 | 46645693 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46645444 | 46645562 | 46645444 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | CDS | 46645157 | 46645234 | 46645157 | ID=Msa1328690-mRNA-1:cds;Parent=Msa1328690-mRNA-1 |
| chr8_4 | three_prime_UTR | 46644801 | 46645156 | 46644801 | ID=Msa1328690-mRNA-1:three_prime_utr;Parent=Msa1328690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
