AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1330100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330100 MtrunA17_Chr4g0054891 95.062 648 9 1 1 625 21 668 0.0 1256
Msa1330100 MtrunA17_Chr5g0400371 77.190 605 102 4 57 625 71 675 0.0 932
Msa1330100 MtrunA17_Chr7g0217461 69.880 581 141 5 69 619 3 579 0.0 790
Msa1330100 MtrunA17_Chr1g0213711 57.192 577 216 8 70 622 2 571 0.0 639
Msa1330100 MtrunA17_Chr7g0214461 57.734 556 207 4 84 616 72 622 0.0 631
Msa1330100 MtrunA17_Chr7g0218851 57.570 568 202 7 84 619 40 600 0.0 617
Msa1330100 MtrunA17_Chr4g0011471 52.453 530 227 3 104 608 30 559 0.0 538
Msa1330100 MtrunA17_Chr4g0011041 47.619 567 270 4 69 608 15 581 4.10e-174 507
Msa1330100 MtrunA17_Chr8g0375311 42.681 567 291 5 70 607 20 581 1.56e-156 462
Msa1330100 MtrunA17_Chr8g0375291 43.060 562 286 6 70 602 20 576 5.19e-154 456
Msa1330100 MtrunA17_Chr8g0375341 41.975 567 295 6 70 607 20 581 2.14e-151 449
Msa1330100 MtrunA17_Chr8g0375351 42.254 568 294 7 69 607 19 581 1.28e-149 444
Msa1330100 MtrunA17_Chr3g0104011 43.517 563 287 9 70 605 2 560 2.81e-149 443
Msa1330100 MtrunA17_Chr7g0241741 41.770 565 292 7 71 606 3 559 5.80e-146 434
Msa1330100 MtrunA17_Chr4g0005901 41.608 572 297 7 61 603 3 566 6.27e-146 435
Msa1330100 MtrunA17_Chr8g0375321 40.989 566 300 6 70 606 17 577 2.98e-144 431
Msa1330100 MtrunA17_Chr8g0375331 41.563 563 295 8 73 606 7 564 3.96e-141 422
Msa1330100 MtrunA17_Chr7g0261771 37.610 569 331 5 60 605 1 568 1.42e-136 412
Msa1330100 MtrunA17_Chr7g0261811 36.742 577 339 6 73 624 10 585 1.20e-134 407
Msa1330100 MtrunA17_Chr8g0375361 40.956 586 310 7 51 607 2 580 2.33e-134 405
Msa1330100 MtrunA17_Chr7g0261881 35.875 577 344 6 73 624 10 585 4.46e-132 400
Msa1330100 MtrunA17_Chr1g0187241 36.937 555 324 7 64 595 2 553 7.39e-127 386
Msa1330100 MtrunA17_Chr3g0142101 36.364 594 340 10 57 624 1 582 1.14e-125 383
Msa1330100 MtrunA17_Chr5g0399061 38.693 566 311 10 71 605 9 569 1.12e-122 375
Msa1330100 MtrunA17_Chr1g0166791 35.063 559 339 5 70 605 4 561 9.72e-122 373
Msa1330100 MtrunA17_Chr7g0261791 36.559 558 327 7 73 605 12 567 2.58e-121 372
Msa1330100 MtrunA17_Chr5g0399071 36.028 569 321 8 72 605 7 567 1.01e-117 362
Msa1330100 MtrunA17_Chr3g0112671 35.616 584 332 12 64 616 6 576 1.18e-117 362
Msa1330100 MtrunA17_Chr3g0142091 35.163 583 341 9 69 624 3 575 9.17e-117 360
Msa1330100 MtrunA17_Chr1g0166711 35.461 564 338 6 64 605 2 561 1.54e-116 360
Msa1330100 MtrunA17_Chr7g0261851 36.204 569 336 6 60 605 1 565 2.05e-115 357
Msa1330100 MtrunA17_Chr4g0063591 37.255 561 323 8 70 606 2 557 2.72e-112 348
Msa1330100 MtrunA17_Chr1g0166741 34.275 531 330 5 76 589 13 541 1.12e-111 347
Msa1330100 MtrunA17_Chr7g0240381 34.079 581 342 11 69 624 7 571 5.28e-110 342
Msa1330100 MtrunA17_Chr4g0056431 35.852 569 327 9 71 605 6 570 1.83e-108 338
Msa1330100 MtrunA17_Chr3g0077151 36.989 538 306 11 76 598 14 533 1.99e-107 335
Msa1330100 MtrunA17_Chr1g0166771 34.809 497 305 5 111 590 12 506 4.51e-106 331
Msa1330100 MtrunA17_Chr3g0114501 35.116 561 323 9 70 599 2 552 5.66e-106 332
Msa1330100 MtrunA17_Chr5g0439381 35.778 559 333 8 78 618 16 566 9.45e-104 326
Msa1330100 MtrunA17_Chr4g0014841 36.248 549 320 9 71 603 10 544 1.88e-103 325
Msa1330100 MtrunA17_Chr4g0014791 35.326 552 321 11 71 603 10 544 1.09e-102 322
Msa1330100 MtrunA17_Chr5g0422881 33.220 587 345 10 73 625 10 583 1.02e-101 321
Msa1330100 MtrunA17_Chr4g0008651 32.131 582 359 10 64 618 9 581 1.87e-101 320
Msa1330100 MtrunA17_Chr4g0014871 34.799 546 323 10 77 603 17 548 2.97e-101 319
Msa1330100 MtrunA17_Chr4g0014801 35.027 551 326 10 71 603 10 546 2.84e-100 316
Msa1330100 MtrunA17_Chr2g0276751 34.955 555 330 10 70 605 18 560 2.21e-99 315
Msa1330100 MtrunA17_Chr7g0261661 37.694 451 255 6 178 605 3 450 2.79e-99 312
Msa1330100 MtrunA17_Chr3g0112611 31.987 594 355 13 64 619 4 586 3.84e-99 314
Msa1330100 MtrunA17_Chr4g0014781 34.783 552 326 11 71 603 10 546 2.99e-98 311
Msa1330100 MtrunA17_Chr7g0261751 35.524 487 260 5 60 493 1 486 5.87e-98 309
Msa1330100 MtrunA17_Chr8g0362711 34.225 561 336 9 70 599 4 562 1.09e-95 305
Msa1330100 MtrunA17_Chr4g0059991 31.356 590 360 7 70 625 9 587 1.77e-95 305
Msa1330100 MtrunA17_Chr8g0353031 33.627 568 315 9 92 621 20 563 2.50e-94 301
Msa1330100 MtrunA17_Chr5g0415791 31.694 549 341 7 90 606 29 575 4.66e-92 296
Msa1330100 MtrunA17_Chr4g0059981 32.058 549 339 6 96 611 37 584 7.96e-92 296
Msa1330100 MtrunA17_Chr7g0214731 32.302 582 342 12 81 616 51 626 2.90e-91 295
Msa1330100 MtrunA17_Chr7g0255601 32.977 561 338 11 77 605 14 568 4.94e-91 294
Msa1330100 MtrunA17_Chr2g0284701 31.261 579 355 11 69 606 10 586 8.80e-90 290
Msa1330100 MtrunA17_Chr5g0415961 32.086 561 347 9 78 606 12 570 1.40e-89 289
Msa1330100 MtrunA17_Chr4g0059971 29.463 577 372 5 64 606 7 582 2.07e-89 289
Msa1330100 MtrunA17_Chr7g0255621 30.864 567 352 11 86 619 16 575 1.42e-88 287
Msa1330100 MtrunA17_Chr1g0193391 30.893 560 341 9 90 624 17 555 3.53e-88 286
Msa1330100 MtrunA17_Chr8g0362781 30.245 572 356 9 70 606 16 579 6.80e-88 285
Msa1330100 MtrunA17_Chr1g0166731 35.698 451 267 5 177 605 9 458 1.41e-86 278
Msa1330100 MtrunA17_Chr7g0271221 30.623 578 349 11 69 622 4 553 5.46e-85 277
Msa1330100 MtrunA17_Chr7g0255611 30.969 578 359 11 60 605 1 570 1.24e-84 276
Msa1330100 MtrunA17_Chr7g0261731 38.506 348 198 2 60 391 1 348 9.30e-84 266
Msa1330100 MtrunA17_Chr8g0379971 31.729 561 328 9 73 579 3 562 1.85e-83 273
Msa1330100 MtrunA17_Chr3g0133341 30.233 559 358 7 86 618 10 562 1.06e-82 270
Msa1330100 MtrunA17_Chr3g0082631 34.180 433 240 7 212 605 30 456 9.39e-81 263
Msa1330100 MtrunA17_Chr4g0069581 31.870 524 320 7 108 606 4 515 5.39e-80 263
Msa1330100 MtrunA17_Chr4g0014861 35.507 414 245 9 209 603 13 423 1.01e-77 253
Msa1330100 MtrunA17_Chr8g0390331 29.609 537 349 8 92 602 17 550 1.30e-74 249
Msa1330100 MtrunA17_Chr1g0157601 29.074 540 346 9 102 613 27 557 1.41e-73 246
Msa1330100 MtrunA17_Chr8g0362801 30.977 481 292 9 178 625 1 474 2.27e-73 243
Msa1330100 MtrunA17_Chr4g0060001 28.720 578 380 9 64 611 2 577 2.77e-72 244
Msa1330100 MtrunA17_Chr6g0451841 31.215 535 325 9 101 607 16 535 4.19e-72 242
Msa1330100 MtrunA17_Chr1g0157611 29.570 558 354 9 90 618 16 563 1.64e-71 241
Msa1330100 MtrunA17_Chr5g0415841 30.330 455 285 7 178 602 1 453 5.23e-70 234
Msa1330100 MtrunA17_Chr1g0157621 29.050 537 341 10 111 618 1 526 3.34e-69 234
Msa1330100 MtrunA17_Chr7g0240271 28.014 564 371 9 88 618 22 583 6.09e-67 229
Msa1330100 MtrunA17_Chr1g0177591 30.769 546 319 18 90 602 42 561 3.91e-66 226
Msa1330100 MtrunA17_Chr4g0003761 28.885 547 356 12 102 619 42 584 6.53e-66 226
Msa1330100 MtrunA17_Chr8g0379991 31.272 566 318 11 108 606 1 562 2.65e-65 224
Msa1330100 MtrunA17_Chr2g0331521 28.342 561 369 9 73 602 2 560 5.83e-65 224
Msa1330100 MtrunA17_Chr2g0325951 29.565 575 343 15 77 616 1 548 1.00e-64 222
Msa1330100 MtrunA17_Chr2g0331511 28.060 531 348 9 102 602 33 559 7.48e-64 222
Msa1330100 MtrunA17_Chr2g0331481 29.520 542 326 14 102 602 37 563 3.37e-63 220
Msa1330100 MtrunA17_Chr2g0325961 27.972 572 357 11 77 616 1 549 3.75e-63 218
Msa1330100 MtrunA17_Chr2g0326211 28.371 571 355 10 77 616 1 548 1.13e-61 214
Msa1330100 MtrunA17_Chr2g0331471 28.358 603 366 18 45 602 45 626 3.71e-61 216
Msa1330100 MtrunA17_Chr1g0147631 27.749 573 378 10 72 616 11 575 4.49e-61 213
Msa1330100 MtrunA17_Chr1g0177611 32.220 419 256 12 206 602 20 432 3.97e-59 204
Msa1330100 MtrunA17_Chr3g0142111 39.273 275 163 2 57 329 11 283 5.22e-59 201
Msa1330100 MtrunA17_Chr7g0235521 29.004 462 293 9 190 618 13 472 1.78e-58 204
Msa1330100 MtrunA17_Chr7g0240281 26.981 593 391 10 65 622 4 589 5.51e-58 205
Msa1330100 MtrunA17_Chr7g0240131 28.726 463 295 9 190 619 13 473 4.04e-57 200
Msa1330100 MtrunA17_Chr7g0240181 28.571 462 295 9 190 618 13 472 2.42e-56 198
Msa1330100 MtrunA17_Chr7g0240211 28.571 462 295 9 190 618 13 472 2.76e-56 197
Msa1330100 MtrunA17_Chr3g0112631 35.395 291 169 8 342 619 4 288 7.07e-56 191
Msa1330100 MtrunA17_Chr3g0142121 35.789 285 172 5 340 623 9 283 3.78e-55 189
Msa1330100 MtrunA17_Chr1g0177631 30.622 418 264 10 206 602 20 432 5.75e-54 190
Msa1330100 MtrunA17_Chr2g0331461 29.190 531 342 10 102 602 37 563 3.41e-53 192
Msa1330100 MtrunA17_Chr7g0240151 27.922 462 280 10 190 618 13 454 2.05e-50 181
Msa1330100 MtrunA17_Chr4g0060071 34.728 239 148 4 368 599 52 289 2.58e-43 157
Msa1330100 MtrunA17_Chr7g0234381 30.562 409 270 8 201 605 20 418 3.15e-43 160
Msa1330100 MtrunA17_Chr7g0234151 30.048 416 274 8 197 605 13 418 1.85e-42 158
Msa1330100 MtrunA17_Chr7g0234181 29.262 393 264 7 217 605 31 413 6.52e-39 148
Msa1330100 MtrunA17_Chr7g0261721 36.923 195 116 2 417 605 5 198 1.00e-36 137
Msa1330100 MtrunA17_Chr3g0112651 36.196 163 100 2 177 339 21 179 2.53e-26 107
Msa1330100 MtrunA17_Chr7g0261671 37.391 115 72 0 60 174 2 116 9.38e-21 88.2
Msa1330100 MtrunA17_Chr2g0326221 29.515 227 135 6 377 602 15 217 9.87e-21 91.3
Msa1330100 MtrunA17_Chr4g0060061 36.207 116 74 0 212 327 18 133 6.42e-19 83.6
Msa1330100 MtrunA17_Chr1g0147591 22.872 188 125 3 219 386 9 196 6.76e-19 85.5
Msa1330100 MtrunA17_Chr4g0014851 42.424 99 57 0 77 175 17 115 1.29e-18 83.6
Msa1330100 MtrunA17_Chr1g0166721 35.922 103 63 1 64 166 2 101 9.91e-18 80.5
Msa1330100 MtrunA17_Chr3g0112661 37.500 112 64 1 78 189 19 124 3.85e-17 78.6
Msa1330100 MtrunA17_Chr7g0261831 31.724 145 83 3 321 449 3 147 2.99e-15 75.1
Msa1330100 MtrunA17_Chr8g0382591 36.792 106 65 2 342 445 4 109 3.84e-12 64.3
Msa1330100 MtrunA17_Chr3g0082621 45.312 64 35 0 112 175 8 71 2.05e-11 60.5
Msa1330100 MtrunA17_Chr4g0060051 30.769 104 72 0 70 173 2 105 2.51e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330100 AT1G32450.1 71.380 594 138 3 57 618 1 594 0.0 866
Msa1330100 AT4G21680.1 67.601 571 156 4 73 614 9 579 0.0 762
Msa1330100 AT5G19640.1 58.824 544 183 6 93 611 60 587 0.0 628
Msa1330100 AT3G54140.1 42.756 566 289 8 70 606 2 561 1.75e-157 464
Msa1330100 AT3G54140.2 42.756 566 289 8 70 606 2 561 1.75e-157 464
Msa1330100 AT2G02040.1 40.663 573 306 6 64 607 13 580 7.34e-149 443
Msa1330100 AT1G62200.1 40.835 551 296 6 78 603 38 583 1.49e-144 432
Msa1330100 AT2G02020.1 41.499 547 290 8 60 599 11 534 2.17e-142 425
Msa1330100 AT5G01180.2 38.475 564 315 6 69 605 2 560 1.03e-137 414
Msa1330100 AT5G01180.3 38.475 564 315 6 69 605 2 560 1.03e-137 414
Msa1330100 AT5G01180.1 38.475 564 315 6 69 605 2 560 1.03e-137 414
Msa1330100 AT1G62200.2 38.832 582 293 8 78 603 38 612 1.22e-137 415
Msa1330100 AT1G62200.3 38.832 582 293 8 78 603 52 626 2.07e-137 415
Msa1330100 AT2G02020.2 39.305 547 281 12 60 599 11 513 2.37e-121 370
Msa1330100 AT2G26690.1 37.857 560 320 7 70 606 2 556 2.97e-118 364
Msa1330100 AT3G54450.1 35.689 566 302 9 89 616 9 550 6.89e-115 354
Msa1330100 AT5G46050.1 34.964 552 316 7 69 588 4 544 7.77e-115 355
Msa1330100 AT5G46040.1 34.191 544 333 7 69 589 4 545 1.11e-110 345
Msa1330100 AT2G26690.2 38.343 519 292 7 111 606 10 523 2.11e-108 337
Msa1330100 AT2G26690.3 38.447 515 289 7 115 606 2 511 3.11e-108 337
Msa1330100 AT2G37900.1 32.194 556 345 7 70 603 16 561 1.04e-104 328
Msa1330100 AT1G12110.1 35.034 588 340 10 69 621 5 585 4.23e-104 328
Msa1330100 AT3G53960.1 32.920 565 335 10 70 602 15 567 1.16e-103 327
Msa1330100 AT2G40460.1 35.432 556 328 9 70 602 2 549 4.72e-102 322
Msa1330100 AT5G13400.1 33.622 577 337 8 81 618 52 621 2.56e-101 321
Msa1330100 AT1G69870.1 33.272 544 332 7 92 606 51 592 2.85e-100 318
Msa1330100 AT3G21670.1 35.072 556 323 9 78 606 12 556 7.61e-99 314
Msa1330100 AT1G22540.1 34.821 560 335 9 70 611 8 555 1.30e-96 307
Msa1330100 AT1G72140.1 34.630 540 323 8 80 603 22 547 3.61e-96 306
Msa1330100 AT1G59740.1 33.102 577 358 10 64 617 13 584 9.54e-96 306
Msa1330100 AT1G68570.1 33.333 591 349 11 60 618 1 578 1.02e-95 306
Msa1330100 AT1G72130.1 36.100 518 309 7 93 603 26 528 3.83e-94 300
Msa1330100 AT1G27080.1 34.532 556 330 10 92 621 14 561 8.77e-92 295
Msa1330100 AT1G68570.2 33.516 546 328 8 105 618 6 548 9.88e-92 295
Msa1330100 AT1G22550.1 33.510 567 327 12 70 603 5 554 1.03e-89 289
Msa1330100 AT1G72120.1 33.455 547 325 9 80 603 17 547 1.93e-88 286
Msa1330100 AT2G37900.2 31.568 491 304 7 135 603 2 482 4.03e-88 283
Msa1330100 AT1G72125.1 33.096 562 324 9 73 603 11 551 4.79e-88 285
Msa1330100 AT5G46050.2 36.117 443 238 8 178 588 3 432 1.28e-87 281
Msa1330100 AT1G69850.1 31.228 570 348 7 71 599 4 570 4.97e-87 283
Msa1330100 AT1G33440.1 33.392 572 342 11 61 605 8 567 1.68e-85 279
Msa1330100 AT1G27080.2 33.966 527 314 10 121 621 1 519 2.77e-85 276
Msa1330100 AT5G62730.1 30.598 585 342 10 55 599 16 576 5.75e-84 275
Msa1330100 AT1G22570.1 32.182 550 330 13 67 586 2 538 1.67e-83 273
Msa1330100 AT1G27040.2 29.875 559 354 5 78 608 9 557 6.17e-82 269
Msa1330100 AT1G27040.1 29.875 559 354 5 78 608 13 561 8.23e-82 268
Msa1330100 AT1G18880.1 29.452 584 375 7 71 622 2 580 2.41e-79 263
Msa1330100 AT5G62680.1 29.273 550 344 7 96 606 47 590 2.23e-78 261
Msa1330100 AT1G22570.2 32.470 502 299 12 112 586 13 501 2.41e-78 258
Msa1330100 AT3G47960.1 28.943 577 349 9 68 606 53 606 3.91e-78 261
Msa1330100 AT5G14940.1 30.674 564 314 14 101 619 16 547 9.59e-78 257
Msa1330100 AT1G27040.3 30.057 529 332 5 108 608 11 529 5.64e-76 252
Msa1330100 AT5G62730.2 30.427 539 314 9 98 599 3 517 3.49e-75 250
Msa1330100 AT3G45650.1 28.295 569 369 10 75 622 5 555 2.42e-74 248
Msa1330100 AT1G72130.2 35.366 410 253 6 201 603 6 410 3.46e-74 244
Msa1330100 AT1G72130.3 35.366 410 253 6 201 603 6 410 3.46e-74 244
Msa1330100 AT3G45710.1 26.998 563 373 7 84 624 13 559 7.05e-74 247
Msa1330100 AT3G45720.1 27.083 528 346 7 114 618 41 552 2.35e-73 246
Msa1330100 AT3G45660.2 27.806 597 386 10 43 618 1 573 5.09e-72 243
Msa1330100 AT3G45680.1 27.434 565 369 8 78 620 8 553 9.84e-72 241
Msa1330100 AT3G45660.1 28.491 530 342 8 110 618 39 552 2.37e-71 240
Msa1330100 AT3G45660.3 28.491 530 342 8 110 618 39 552 2.37e-71 240
Msa1330100 AT1G52190.1 27.664 535 351 9 102 602 31 563 8.69e-71 240
Msa1330100 AT3G16180.1 29.091 550 354 11 86 602 16 562 4.27e-70 238
Msa1330100 AT3G45650.2 27.652 575 353 9 75 602 5 563 1.94e-69 236
Msa1330100 AT3G01350.1 28.774 563 336 12 101 619 16 557 9.56e-67 228
Msa1330100 AT3G25260.1 28.439 538 338 11 82 605 11 515 9.76e-67 227
Msa1330100 AT3G45700.1 25.312 561 372 10 82 619 5 541 6.55e-64 220
Msa1330100 AT1G69860.1 29.533 535 344 9 96 606 22 547 6.75e-61 212
Msa1330100 AT5G11570.1 29.134 508 298 10 102 603 23 474 2.70e-59 206
Msa1330100 AT3G45690.1 25.940 532 317 9 110 620 36 511 1.12e-58 205
Msa1330100 AT3G25280.1 28.253 538 341 13 82 603 11 519 3.03e-58 204
Msa1330100 AT5G28470.2 26.266 533 368 6 90 598 15 546 5.46e-58 204
Msa1330100 AT5G28470.1 26.079 533 367 7 90 598 15 544 2.76e-55 197
Msa1330100 AT2G38100.2 24.466 515 314 17 120 598 2 477 3.46e-29 122
Msa1330100 AT2G38100.1 24.571 525 320 18 110 598 9 493 4.48e-29 122
Msa1330100 AT2G38100.3 24.571 525 320 18 110 598 15 499 5.46e-29 121

Find 133 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGGGCTCTTGGGTTT+TGG 0.139139 8_4:+49160463 Msa1330100:CDS
GGTTTAAAGTGTCTATATTT+TGG 0.157297 8_4:-49160537 None:intergenic
CCAGATTTGGCTCTGTTTGC+TGG 0.157495 8_4:-49156762 None:intergenic
TACTAAGACTTCTTCCAATT+TGG 0.183807 8_4:+49161123 Msa1330100:CDS
CTTTCCTAAGTGATTCTTAT+TGG 0.215575 8_4:+49159989 Msa1330100:CDS
CTAGCAACCTTAGCATTCTT+TGG 0.234711 8_4:+49159850 Msa1330100:CDS
ACTTCTTCAACTTGAGTAAT+AGG 0.241585 8_4:-49161092 None:intergenic
ATTCCTCAGTATGCACTTAT+AGG 0.250210 8_4:+49161494 Msa1330100:CDS
TTTCCTAAGTGATTCTTATT+GGG 0.261209 8_4:+49159990 Msa1330100:CDS
TATAACTTCAAGAGATTTAG+AGG 0.282564 8_4:+49161031 Msa1330100:CDS
CTGGAATAGTGGAATGTTAT+AGG 0.286030 8_4:+49161420 Msa1330100:CDS
GTTTACATCTTCTCTCTTGT+TGG 0.299285 8_4:+49159964 Msa1330100:CDS
GAGGAAGATTGTTGTTGATT+TGG 0.311217 8_4:-49156278 None:intergenic
TCAAAGTTTCAAAGACAAAA+AGG 0.325831 8_4:-49156331 None:intergenic
ATTATTGTGCAAAGCCAAAT+TGG 0.326777 8_4:-49161137 None:intergenic
TTTCCATTTCCACAACCTTT+TGG 0.329693 8_4:-49160201 None:intergenic
TTAAAGAGACTCAGGTAAAA+AGG 0.330271 8_4:-49161967 None:intergenic
CAACCAAACATTGCAACATT+TGG 0.338350 8_4:+49160309 Msa1330100:CDS
TGACCTCTATTCAAGTTTCC+AGG 0.340603 8_4:-49161701 None:intergenic
AGCAAACCATCTCCCAGATT+TGG 0.342083 8_4:-49156775 None:intergenic
TTTATGTACTTTGAAATTCA+TGG 0.344293 8_4:+49162031 Msa1330100:three_prime_UTR
TTGAGTGATCCTCATCAAAT+TGG 0.346545 8_4:-49160338 None:intergenic
ACAGAAAAGTTAACTCTTGA+TGG 0.347683 8_4:+49156717 Msa1330100:CDS
AGAGATTTAGAGGTCCAAAA+AGG 0.353250 8_4:+49161041 Msa1330100:CDS
ATGTTAACACTTCTCCATAT+TGG 0.354261 8_4:-49161872 None:intergenic
ATCACCAATGGCTTGCTTAG+AGG 0.355045 8_4:+49156355 Msa1330100:CDS
AAGTATAATCATTTCCAATA+TGG 0.355664 8_4:+49161858 Msa1330100:exon
GGAACATTCAAGTTTGGAAA+TGG 0.377855 8_4:+49160236 Msa1330100:CDS
ATGTGGGGAACATTCAAGTT+TGG 0.379230 8_4:+49160230 Msa1330100:CDS
CCTGATGGATTGAAGAGCTT+TGG 0.380582 8_4:+49161572 Msa1330100:CDS
AGACCAAAAGGTTGTGGAAA+TGG 0.381408 8_4:+49160198 Msa1330100:CDS
CCAGCAAACAGAGCCAAATC+TGG 0.383414 8_4:+49156762 Msa1330100:CDS
TAGAAGAAAATGTGATGGTT+TGG 0.386182 8_4:+49161932 Msa1330100:three_prime_UTR
ACCTTAGCATTCTTTGGAGT+TGG 0.386511 8_4:+49159856 Msa1330100:CDS
CAGATTTGGCTCTGTTTGCT+GGG 0.386593 8_4:-49156761 None:intergenic
TCATTAAATCTCCTTGTCTT+CGG 0.392639 8_4:+49156248 Msa1330100:CDS
GCACCAAATGTTGCAATGTT+TGG 0.396893 8_4:-49160312 None:intergenic
TCTGTTCCTGACAAGGGTGT+TGG 0.404195 8_4:+49159891 Msa1330100:CDS
AAAACATGTGCTATCTTTCA+AGG 0.405049 8_4:+49160021 Msa1330100:CDS
GTAAGTTCCATTGCTAATGA+TGG 0.408793 8_4:+49162148 Msa1330100:three_prime_UTR
TTTGCTGCTTCAAGGAAATT+GGG 0.409217 8_4:+49160597 Msa1330100:CDS
CTGTTCCTGACAAGGGTGTT+GGG 0.412390 8_4:+49159892 Msa1330100:CDS
GGAGTTCAAATGACATCAAA+TGG 0.415747 8_4:+49160618 Msa1330100:CDS
GATGAAGGATTATGGGCTCT+TGG 0.416318 8_4:+49160456 Msa1330100:CDS
ATGAAGGATTATGGGCTCTT+GGG 0.420386 8_4:+49160457 Msa1330100:CDS
CTTGACCCAACACCCTTGTC+AGG 0.427124 8_4:-49159897 None:intergenic
CAAGCTCTCTAAGTATCTTC+TGG 0.430069 8_4:+49161468 Msa1330100:CDS
CTCTTGATGGGAGTGTTGAT+TGG 0.437188 8_4:+49156730 Msa1330100:CDS
TTCAATGCTCAAACACCTGA+TGG 0.444902 8_4:+49161557 Msa1330100:CDS
CTTGCTTTGCTTAGACCAAA+AGG 0.446216 8_4:+49160186 Msa1330100:CDS
GAACATTCAAGTTTGGAAAT+GGG 0.449440 8_4:+49160237 Msa1330100:CDS
TCGAAGCTAGACATGCTTGC+TGG 0.451741 8_4:-49161248 None:intergenic
AGGCTATCAGATAGATTGAT+AGG 0.454195 8_4:-49160269 None:intergenic
AAATCTGGGAGATGGTTTGC+TGG 0.458977 8_4:+49156777 Msa1330100:CDS
AAGAAGTCAAAACAGCCAAT+AGG 0.459055 8_4:-49161742 None:intergenic
TATCTGATAGCCTTAGGAAA+TGG 0.460404 8_4:+49160279 Msa1330100:CDS
CTCACTGAACTTCAAAGAAT+GGG 0.463268 8_4:+49161359 Msa1330100:CDS
CCAAAGCTCTTCAATCCATC+AGG 0.464327 8_4:-49161572 None:intergenic
TTGCTTAGACCAAAAGGTTG+TGG 0.464656 8_4:+49160192 Msa1330100:CDS
GATTATACTTTGCAGCTACT+AGG 0.467336 8_4:-49161845 None:intergenic
TGAATAGAGGTCACTTGGAT+AGG 0.471177 8_4:+49161711 Msa1330100:CDS
GAAATTCATGGTTGTATCCA+TGG 0.472052 8_4:+49162043 Msa1330100:three_prime_UTR
TCAATCTATCTGATAGCCTT+AGG 0.473052 8_4:+49160273 Msa1330100:CDS
ATAAACTGAAAATCTTAGTC+AGG 0.474709 8_4:-49162013 None:intergenic
ACTCACTGAACTTCAAAGAA+TGG 0.482231 8_4:+49161358 Msa1330100:CDS
TTGATATCCTCCATTTCCTA+AGG 0.501268 8_4:-49160289 None:intergenic
AAGTTTCCAGGGATCCATCC+TGG 0.501655 8_4:-49161689 None:intergenic
TTGAAGTTCAGTGAGTCCCT+TGG 0.502306 8_4:-49161351 None:intergenic
GAAGTATTCACTATATATAG+AGG 0.510398 8_4:-49156209 None:intergenic
CGAGTACTTGATCCACTTGT+CGG 0.511632 8_4:+49161308 Msa1330100:CDS
TATTATGAATAAGAGAAGGA+AGG 0.513383 8_4:+49161899 Msa1330100:three_prime_UTR
TCAACTGAAGATCACATGCC+AGG 0.517301 8_4:+49161671 Msa1330100:CDS
CACATGCCAGGATGGATCCC+TGG 0.519851 8_4:+49161683 Msa1330100:CDS
AAAGGAGAGTTATTCAAAAG+TGG 0.523525 8_4:+49160359 Msa1330100:CDS
GAACTTCAAAGAATGGGAAT+CGG 0.527583 8_4:+49161365 Msa1330100:CDS
ATAATCGCAATGGTTACAGC+TGG 0.529971 8_4:+49161401 Msa1330100:CDS
ATTATGAATAAGAGAAGGAA+GGG 0.530098 8_4:+49161900 Msa1330100:three_prime_UTR
CCCTTGTCAGGAACAGAACT+AGG 0.535224 8_4:-49159885 None:intergenic
AATGGTTACAGCTGGAATAG+TGG 0.536685 8_4:+49161409 Msa1330100:CDS
CAGACCTCTAAGCAAGCCAT+TGG 0.536733 8_4:-49156359 None:intergenic
AAAGATACCATGGGTTATGT+TGG 0.537608 8_4:-49161067 None:intergenic
TTCCTAAGTGATTCTTATTG+GGG 0.537811 8_4:+49159991 Msa1330100:CDS
TGAAACTTTGACATCACCAA+TGG 0.540822 8_4:+49156343 Msa1330100:CDS
ATGCTAAGGTTGCTAGACCT+TGG 0.541001 8_4:-49159843 None:intergenic
AAACTTGAATAGAGGTCACT+TGG 0.546503 8_4:+49161706 Msa1330100:CDS
CAGCAAACAGAGCCAAATCT+GGG 0.549410 8_4:+49156763 Msa1330100:CDS
CAGAAAAGTTAACTCTTGAT+GGG 0.549735 8_4:+49156718 Msa1330100:CDS
GTGGTTTCAGAATATTCAGA+TGG 0.554184 8_4:+49161796 Msa1330100:CDS
CTGAAGATCACATGCCAGGA+TGG 0.554639 8_4:+49161675 Msa1330100:CDS
ACCTAGTTCTGTTCCTGACA+AGG 0.556376 8_4:+49159884 Msa1330100:CDS
GACCTCTATTCAAGTTTCCA+GGG 0.557167 8_4:-49161700 None:intergenic
AACATGTCCATCATTAGCAA+TGG 0.564737 8_4:-49162155 None:intergenic
TGCACTTATAGGAGCTTCTG+AGG 0.569295 8_4:+49161505 Msa1330100:CDS
ACGGTAGAAGAAAATGAAGA+TGG 0.571774 8_4:-49161285 None:intergenic
CTGATAGCCTTAGGAAATGG+AGG 0.572975 8_4:+49160282 Msa1330100:CDS
ACTTGGCAGAATCTAGAAAG+AGG 0.576464 8_4:-49160570 None:intergenic
GAAATGGAAAACTTGAATGT+GGG 0.577470 8_4:+49160214 Msa1330100:CDS
CAAAGCAAGGTATGTTGTAA+CGG 0.578717 8_4:-49160172 None:intergenic
CTGCTAACAATGTTAGCAAG+TGG 0.580663 8_4:+49159932 Msa1330100:CDS
TTGGATGAAAGCCGAAGACA+AGG 0.581750 8_4:-49156259 None:intergenic
TATAGACACTTTAAACCTTG+TGG 0.582951 8_4:+49160543 Msa1330100:CDS
ATCCCTGGAAACTTGAATAG+AGG 0.584308 8_4:+49161698 Msa1330100:CDS
CGTTATAGCTATAATCGCAA+TGG 0.587150 8_4:+49161391 Msa1330100:CDS
ACGTTCAATTTATACAACCA+TGG 0.588268 8_4:-49162060 None:intergenic
TTCCCCAATAAGAATCACTT+AGG 0.589696 8_4:-49159993 None:intergenic
ACAGAGCCAAATCTGGGAGA+TGG 0.590338 8_4:+49156769 Msa1330100:CDS
GAATACAGTTAAAGAGACTC+AGG 0.593665 8_4:-49161975 None:intergenic
AACAATGTTAGCAAGTGGAC+TGG 0.597557 8_4:+49159937 Msa1330100:CDS
TCCAACTCCAAAGAATGCTA+AGG 0.597785 8_4:-49159857 None:intergenic
TGCATGACAAGTATCTCACT+TGG 0.599502 8_4:+49161605 Msa1330100:CDS
GGAAATGGAAAACTTGAATG+TGG 0.600088 8_4:+49160213 Msa1330100:CDS
TATATATTATGAATAAGAGA+AGG 0.610955 8_4:+49161895 Msa1330100:three_prime_UTR
CTTATATTGCATGTGCAAAG+TGG 0.617065 8_4:+49161777 Msa1330100:CDS
CTAGAAAGAGGATTGCCACA+AGG 0.617266 8_4:-49160558 None:intergenic
CCTAGTTCTGTTCCTGACAA+GGG 0.617734 8_4:+49159885 Msa1330100:CDS
GTAATAGGACAAAGATACCA+TGG 0.629501 8_4:-49161077 None:intergenic
AGTACTAGAAGAAAATGTGA+TGG 0.631431 8_4:+49161927 Msa1330100:three_prime_UTR
GATGGGAGTGTTGATTGGCA+TGG 0.632528 8_4:+49156735 Msa1330100:CDS
TAATGATGAAACAGAGTGTG+TGG 0.633725 8_4:-49156231 None:intergenic
AGGCTTAAGTATGCAAAACA+AGG 0.635128 8_4:+49161440 Msa1330100:CDS
TGGTGCTGACCAATTTGATG+AGG 0.636240 8_4:+49160329 Msa1330100:CDS
ATTTGATGAGGATCACTCAA+AGG 0.639587 8_4:+49160341 Msa1330100:CDS
AAGCTAGACATGCTTGCTGG+TGG 0.641340 8_4:-49161245 None:intergenic
GAACAAGGAAGACCCAAGAG+AGG 0.644148 8_4:-49162110 None:intergenic
TAATAGGACAAAGATACCAT+GGG 0.644527 8_4:-49161076 None:intergenic
AAGGAGGCCAACATAACCCA+TGG 0.645622 8_4:+49161060 Msa1330100:CDS
TTGCTTAGAGGTCTGCAAAG+AGG 0.646487 8_4:+49156367 Msa1330100:CDS
TGTTTGAGAAAAGTGAACCA+AGG 0.671848 8_4:-49160413 None:intergenic
AAATGAAGATGGCTACGCTG+AGG 0.695724 8_4:-49161274 None:intergenic
TTTAATCTACCAGTGAACCA+AGG 0.698549 8_4:+49159826 Msa1330100:intron
AAATGGAAAACTTGAATGTG+GGG 0.708899 8_4:+49160215 Msa1330100:CDS
CAAGTGGATCAAGTACTCGA+CGG 0.715679 8_4:-49161304 None:intergenic
GCTCCTATAAGTGCATACTG+AGG 0.719671 8_4:-49161497 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTATTTTT+AGG + chr8_4:49157883-49157902 Msa1330100:intron 0.0%
!!! TTTTTTATTTTTTATTTTTA+GGG + chr8_4:49157884-49157903 Msa1330100:intron 0.0%
!! AATATTATATAGTTAAACTA+AGG + chr8_4:49156611-49156630 Msa1330100:intron 10.0%
!!! TTTATTTTATTACATCAAAT+TGG + chr8_4:49156873-49156892 Msa1330100:intron 10.0%
!! AATATGGTATTATAAATTAA+GGG - chr8_4:49157188-49157207 None:intergenic 10.0%
!!! AAATTCAAACATTTTAATTT+AGG - chr8_4:49159525-49159544 None:intergenic 10.0%
!! AATATTTAATTCATTAGAAA+GGG - chr8_4:49159556-49159575 None:intergenic 10.0%
!! AAATATTTAATTCATTAGAA+AGG - chr8_4:49159557-49159576 None:intergenic 10.0%
!!! AACATTATATTTTAGAAACA+AGG - chr8_4:49156427-49156446 None:intergenic 15.0%
!! CACATATCTAAATATAAATT+TGG + chr8_4:49156923-49156942 Msa1330100:intron 15.0%
!!! CATATATATGATTTAAGATA+GGG - chr8_4:49157164-49157183 None:intergenic 15.0%
!! GAATATGGTATTATAAATTA+AGG - chr8_4:49157189-49157208 None:intergenic 15.0%
!!! AAATCGTATTTTATATTATG+TGG + chr8_4:49157257-49157276 Msa1330100:intron 15.0%
!!! ATTTTATATTATGTGGATTA+AGG + chr8_4:49157264-49157283 Msa1330100:intron 15.0%
!! TGAATAAACATATATGATTA+CGG - chr8_4:49157459-49157478 None:intergenic 15.0%
!!! TTGTTTTTTGTTACTTTTTT+TGG - chr8_4:49157504-49157523 None:intergenic 15.0%
!! TTACTAATGTGTTTAATTAT+GGG - chr8_4:49158269-49158288 None:intergenic 15.0%
!! TCAATTCAAACATTAAAAAT+AGG - chr8_4:49158538-49158557 None:intergenic 15.0%
!! AAAAAAAAAATAATGTATGG+AGG + chr8_4:49159699-49159718 Msa1330100:intron 15.0%
!! TAGTAAGAAATTAATTAAAG+TGG - chr8_4:49160089-49160108 None:intergenic 15.0%
!!! TAATTTGTTCATTTATGTTA+TGG + chr8_4:49160120-49160139 Msa1330100:intron 15.0%
!! TATATATTATGAATAAGAGA+AGG + chr8_4:49161895-49161914 Msa1330100:three_prime_UTR 15.0%
!! ATATGGAAAAGTTGTATTTA+TGG - chr8_4:49156396-49156415 None:intergenic 20.0%
!!! CCATATATATGATTTAAGAT+AGG - chr8_4:49157165-49157184 None:intergenic 20.0%
!! CCTATCTTAAATCATATATA+TGG + chr8_4:49157162-49157181 Msa1330100:intron 20.0%
!!! TACGATTTTATTAATACACA+GGG - chr8_4:49157245-49157264 None:intergenic 20.0%
!!! ATACGATTTTATTAATACAC+AGG - chr8_4:49157246-49157265 None:intergenic 20.0%
!! ATATCAAATAGATAGCTTAT+TGG - chr8_4:49157398-49157417 None:intergenic 20.0%
!! TACACTTTCATATATACTTA+TGG + chr8_4:49158179-49158198 Msa1330100:intron 20.0%
!! GTTACTAATGTGTTTAATTA+TGG - chr8_4:49158270-49158289 None:intergenic 20.0%
!! TAAATAGTAGTGACAAAATT+TGG - chr8_4:49158320-49158339 None:intergenic 20.0%
!!! CACAATCTTTTAGATTTTTT+TGG + chr8_4:49158742-49158761 Msa1330100:intron 20.0%
!!! AATCTTTTAGATTTTTTTGG+TGG + chr8_4:49158745-49158764 Msa1330100:intron 20.0%
!! AGGAAAAATATTTCTTGATT+TGG - chr8_4:49159055-49159074 None:intergenic 20.0%
!!! ATCAAGAAATATTTTTCCTT+TGG + chr8_4:49159056-49159075 Msa1330100:intron 20.0%
!!! AAATAAATTTAGGTTAAGAG+AGG + chr8_4:49159323-49159342 Msa1330100:intron 20.0%
!!! AATAAATTTAGGTTAAGAGA+GGG + chr8_4:49159324-49159343 Msa1330100:intron 20.0%
!! TTCTATCACATATTATTTGT+TGG - chr8_4:49159461-49159480 None:intergenic 20.0%
!!! TCAAACATTTTAATTTAGGA+TGG - chr8_4:49159521-49159540 None:intergenic 20.0%
!! TCATGAAAAAAAAAGTTCAT+AGG + chr8_4:49159632-49159651 Msa1330100:intron 20.0%
!!! ATTTTTTAGCTACTTTTACT+TGG + chr8_4:49160383-49160402 Msa1330100:CDS 20.0%
!!! TTTAAAGTGTCTATATTTTG+GGG - chr8_4:49160538-49160557 None:intergenic 20.0%
!!! GTTTAAAGTGTCTATATTTT+GGG - chr8_4:49160539-49160558 None:intergenic 20.0%
!!! GAATTTTATTTAAAATCCTG+CGG + chr8_4:49160833-49160852 Msa1330100:intron 20.0%
!! GTAATTAAACAATAGAACTT+CGG + chr8_4:49160860-49160879 Msa1330100:intron 20.0%
!! ATATAAGTCATAATTGCATT+TGG + chr8_4:49160931-49160950 Msa1330100:intron 20.0%
!! ATAGATGATAAATGGAAAAT+TGG - chr8_4:49160983-49161002 None:intergenic 20.0%
!! AAGTATAATCATTTCCAATA+TGG + chr8_4:49161858-49161877 Msa1330100:exon 20.0%
!!! TTTATGTACTTTGAAATTCA+TGG + chr8_4:49162031-49162050 Msa1330100:three_prime_UTR 20.0%
!! AACTTACAAAAAATGAAAGA+AGG - chr8_4:49162135-49162154 None:intergenic 20.0%
!! GAAGTATTCACTATATATAG+AGG - chr8_4:49156212-49156231 None:intergenic 25.0%
! TCAAAGTTTCAAAGACAAAA+AGG - chr8_4:49156334-49156353 None:intergenic 25.0%
! GAAACAAGGAATAAACAATA+TGG - chr8_4:49156413-49156432 None:intergenic 25.0%
!! GGACTTTAATTTAGTAATGT+TGG - chr8_4:49156450-49156469 None:intergenic 25.0%
!!! AATCAAACAGAGTTTTGTTT+TGG - chr8_4:49156506-49156525 None:intergenic 25.0%
! TTAACACATATACGTCAAAA+TGG - chr8_4:49156666-49156685 None:intergenic 25.0%
! ATGTGTTAAAAAATTTGTGC+AGG + chr8_4:49156677-49156696 Msa1330100:intron 25.0%
! TGTGTTAAAAAATTTGTGCA+GGG + chr8_4:49156678-49156697 Msa1330100:intron 25.0%
!! GCAATTTTTATGTGTAGATT+TGG - chr8_4:49156824-49156843 None:intergenic 25.0%
! TAACGTAAAACTTCTTTGTT+AGG - chr8_4:49157044-49157063 None:intergenic 25.0%
!!! TGCGTAGTTAATTTTTCAAA+AGG - chr8_4:49157083-49157102 None:intergenic 25.0%
! TGGACTCATAAAAATGAATA+TGG - chr8_4:49157204-49157223 None:intergenic 25.0%
!!! ACGTATAATTTGATGATGAT+AGG + chr8_4:49157572-49157591 Msa1330100:intron 25.0%
! ATTGCATATTCAATAATAGC+TGG - chr8_4:49157652-49157671 None:intergenic 25.0%
! GAATATGCAATGCAATTAAT+CGG + chr8_4:49157661-49157680 Msa1330100:intron 25.0%
! ACAACTTTAATTAACACTAC+AGG + chr8_4:49157806-49157825 Msa1330100:intron 25.0%
!!! TTTTTAGGGTTTTGATTTGT+TGG + chr8_4:49157898-49157917 Msa1330100:intron 25.0%
! AGACAGAAAATAGGAAAAAA+AGG + chr8_4:49158023-49158042 Msa1330100:intron 25.0%
! TACCATATTCTTAACCTTAT+TGG - chr8_4:49158435-49158454 None:intergenic 25.0%
! AATAAGGTTAAGAATATGGT+AGG + chr8_4:49158434-49158453 Msa1330100:intron 25.0%
! TTTGTCCTAAATAAAACGTT+AGG + chr8_4:49158484-49158503 Msa1330100:intron 25.0%
!!! TCATACCTAACGTTTTATTT+AGG - chr8_4:49158492-49158511 None:intergenic 25.0%
! GTATAAAATATGCAAGGTTT+CGG - chr8_4:49158787-49158806 None:intergenic 25.0%
! GACAATGTATAAAATATGCA+AGG - chr8_4:49158793-49158812 None:intergenic 25.0%
!!! AGGACTTGTTTTTTTGTTTT+AGG - chr8_4:49159113-49159132 None:intergenic 25.0%
! AAAAACAAGTCCTATTAGTT+AGG + chr8_4:49159120-49159139 Msa1330100:intron 25.0%
! TGAACAAATATGGTGTAATT+TGG - chr8_4:49159397-49159416 None:intergenic 25.0%
! TTAGATCTTCTGAACAAATA+TGG - chr8_4:49159407-49159426 None:intergenic 25.0%
! TTTCCTAAGTGATTCTTATT+GGG + chr8_4:49159990-49160009 Msa1330100:CDS 25.0%
! ATGTTATGGTTTGATATAAC+AGG + chr8_4:49160134-49160153 Msa1330100:intron 25.0%
! TGTTATGGTTTGATATAACA+GGG + chr8_4:49160135-49160154 Msa1330100:intron 25.0%
!! ACTTTTCTCAAACACTATTT+TGG + chr8_4:49160422-49160441 Msa1330100:CDS 25.0%
!! CTTTTCTCAAACACTATTTT+GGG + chr8_4:49160423-49160442 Msa1330100:CDS 25.0%
!!! ATTTTGAAGATGAAGGATTA+TGG + chr8_4:49160448-49160467 Msa1330100:CDS 25.0%
!!! TTTTGAAGATGAAGGATTAT+GGG + chr8_4:49160449-49160468 Msa1330100:CDS 25.0%
!!! GGTTTAAAGTGTCTATATTT+TGG - chr8_4:49160540-49160559 None:intergenic 25.0%
! TGTAAACATCAAATCGTTAT+TGG - chr8_4:49160741-49160760 None:intergenic 25.0%
! TATAACTTCAAGAGATTTAG+AGG + chr8_4:49161031-49161050 Msa1330100:CDS 25.0%
!!! TATTTTGAAACTGGAAATAG+TGG - chr8_4:49161225-49161244 None:intergenic 25.0%
! TATTATGAATAAGAGAAGGA+AGG + chr8_4:49161899-49161918 Msa1330100:three_prime_UTR 25.0%
! ATTATGAATAAGAGAAGGAA+GGG + chr8_4:49161900-49161919 Msa1330100:three_prime_UTR 25.0%
! ATAAACTGAAAATCTTAGTC+AGG - chr8_4:49162016-49162035 None:intergenic 25.0%
!!! AAGAGACAATGATAGTTTTA+GGG + chr8_4:49162087-49162106 Msa1330100:three_prime_UTR 25.0%
! AAAAAATGAAAGAAGGAACA+AGG - chr8_4:49162128-49162147 None:intergenic 25.0%
TCATTAAATCTCCTTGTCTT+CGG + chr8_4:49156248-49156267 Msa1330100:CDS 30.0%
! GGATGGATATATCTGTATTT+TGG - chr8_4:49156471-49156490 None:intergenic 30.0%
TACAGATATATCCATCCTAT+TGG + chr8_4:49156474-49156493 Msa1330100:intron 30.0%
GTGTTAAAAAATTTGTGCAG+GGG + chr8_4:49156679-49156698 Msa1330100:intron 30.0%
ACAGAAAAGTTAACTCTTGA+TGG + chr8_4:49156717-49156736 Msa1330100:CDS 30.0%
CAGAAAAGTTAACTCTTGAT+GGG + chr8_4:49156718-49156737 Msa1330100:CDS 30.0%
! GTGGATTAAGGTTTAAAGTT+AGG + chr8_4:49157276-49157295 Msa1330100:intron 30.0%
!! TGTTACTTAGAGGTCAATTT+TGG + chr8_4:49157309-49157328 Msa1330100:intron 30.0%
!! AGATAAATTTTGAGTGTGCA+CGG + chr8_4:49157534-49157553 Msa1330100:intron 30.0%
ATAGGATTATAAAAGAGTCG+TGG + chr8_4:49157590-49157609 Msa1330100:intron 30.0%
TATTCAATAATAGCTGGACA+AGG - chr8_4:49157646-49157665 None:intergenic 30.0%
! TGTTCTATCTAAAACCGAAA+CGG - chr8_4:49157939-49157958 None:intergenic 30.0%
! TCTTATTTGCAATTACGTGT+CGG - chr8_4:49158112-49158131 None:intergenic 30.0%
AATAAGATTAACCATGACGT+AGG + chr8_4:49158125-49158144 Msa1330100:intron 30.0%
CACCAATAAGGTTAAGAATA+TGG + chr8_4:49158430-49158449 Msa1330100:intron 30.0%
!!! CTTTTAGATTTTTTTGGTGG+TGG + chr8_4:49158748-49158767 Msa1330100:intron 30.0%
GTATTTACAATTGGTCGATA+CGG - chr8_4:49159082-49159101 None:intergenic 30.0%
AACTAAGATATCAAAGGTGA+AGG + chr8_4:49159148-49159167 Msa1330100:intron 30.0%
CTTTCCTAAGTGATTCTTAT+TGG + chr8_4:49159989-49160008 Msa1330100:CDS 30.0%
TTCCTAAGTGATTCTTATTG+GGG + chr8_4:49159991-49160010 Msa1330100:CDS 30.0%
AAAACATGTGCTATCTTTCA+AGG + chr8_4:49160021-49160040 Msa1330100:CDS 30.0%
GAAATGGAAAACTTGAATGT+GGG + chr8_4:49160214-49160233 Msa1330100:CDS 30.0%
AAATGGAAAACTTGAATGTG+GGG + chr8_4:49160215-49160234 Msa1330100:CDS 30.0%
! GAACATTCAAGTTTGGAAAT+GGG + chr8_4:49160237-49160256 Msa1330100:CDS 30.0%
AAAGGAGAGTTATTCAAAAG+TGG + chr8_4:49160359-49160378 Msa1330100:CDS 30.0%
! AAAAAGTACAAGAGCCAAAA+AGG - chr8_4:49160505-49160524 None:intergenic 30.0%
TATAGACACTTTAAACCTTG+TGG + chr8_4:49160543-49160562 Msa1330100:CDS 30.0%
TGATGTTTACACTTCAATAG+CGG + chr8_4:49160750-49160769 Msa1330100:intron 30.0%
CCTGCAATATAGATGATAAA+TGG - chr8_4:49160991-49161010 None:intergenic 30.0%
CCATTTATCATCTATATTGC+AGG + chr8_4:49160988-49161007 Msa1330100:intron 30.0%
! TCATCTATATTGCAGGTTTT+TGG + chr8_4:49160995-49161014 Msa1330100:intron 30.0%
!! TATATTGCAGGTTTTTGGAT+AGG + chr8_4:49161000-49161019 Msa1330100:intron 30.0%
!! ATATTGCAGGTTTTTGGATA+GGG + chr8_4:49161001-49161020 Msa1330100:intron 30.0%
TAATAGGACAAAGATACCAT+GGG - chr8_4:49161079-49161098 None:intergenic 30.0%
ACTTCTTCAACTTGAGTAAT+AGG - chr8_4:49161095-49161114 None:intergenic 30.0%
TACTAAGACTTCTTCCAATT+TGG + chr8_4:49161123-49161142 Msa1330100:CDS 30.0%
ATTATTGTGCAAAGCCAAAT+TGG - chr8_4:49161140-49161159 None:intergenic 30.0%
ACTCAAAAAAACAAGTTCCA+AGG + chr8_4:49161334-49161353 Msa1330100:CDS 30.0%
CTCAAAAAAACAAGTTCCAA+GGG + chr8_4:49161335-49161354 Msa1330100:CDS 30.0%
!! TCTGAGGTTTTTATGTATGT+AGG + chr8_4:49161521-49161540 Msa1330100:CDS 30.0%
ATGTTAACACTTCTCCATAT+TGG - chr8_4:49161875-49161894 None:intergenic 30.0%
AGTACTAGAAGAAAATGTGA+TGG + chr8_4:49161927-49161946 Msa1330100:three_prime_UTR 30.0%
TAGAAGAAAATGTGATGGTT+TGG + chr8_4:49161932-49161951 Msa1330100:three_prime_UTR 30.0%
TTAAAGAGACTCAGGTAAAA+AGG - chr8_4:49161970-49161989 None:intergenic 30.0%
ACGTTCAATTTATACAACCA+TGG - chr8_4:49162063-49162082 None:intergenic 30.0%
! GAAGAGACAATGATAGTTTT+AGG + chr8_4:49162086-49162105 Msa1330100:three_prime_UTR 30.0%
TAATGATGAAACAGAGTGTG+TGG - chr8_4:49156234-49156253 None:intergenic 35.0%
! GAGGAAGATTGTTGTTGATT+TGG - chr8_4:49156281-49156300 None:intergenic 35.0%
TGAGAAAAATGATGAAGCAG+AGG - chr8_4:49156300-49156319 None:intergenic 35.0%
TGAAACTTTGACATCACCAA+TGG + chr8_4:49156343-49156362 Msa1330100:CDS 35.0%
!!! TTGTTTTGGTGAGTTCCAAT+AGG - chr8_4:49156492-49156511 None:intergenic 35.0%
CGTGAGTGATCAACATAATT+TGG - chr8_4:49156542-49156561 None:intergenic 35.0%
!! AGTTTTTGAGCATGCACTTA+CGG + chr8_4:49156572-49156591 Msa1330100:intron 35.0%
!!! TGATCATAGTTTTGTGATCG+CGG + chr8_4:49156972-49156991 Msa1330100:intron 35.0%
! CATTTTTATGAGTCCATGTG+TGG + chr8_4:49157208-49157227 Msa1330100:intron 35.0%
!! GATAAATTTTGAGTGTGCAC+GGG + chr8_4:49157535-49157554 Msa1330100:intron 35.0%
!! ATAAATTTTGAGTGTGCACG+GGG + chr8_4:49157536-49157555 Msa1330100:intron 35.0%
CAAGGTTCTTGAATCTTCTA+CGG - chr8_4:49157628-49157647 None:intergenic 35.0%
TATGCAATGCAATTAATCGG+TGG + chr8_4:49157664-49157683 Msa1330100:intron 35.0%
CTGAATCCTTATAAAACGAC+AGG + chr8_4:49158000-49158019 Msa1330100:intron 35.0%
ATAAGCCACAATCTCATGTA+AGG + chr8_4:49158396-49158415 Msa1330100:intron 35.0%
GGTTAAGAATATGGTAGGTT+AGG + chr8_4:49158439-49158458 Msa1330100:intron 35.0%
GGTTAGGATAGACTTTAGTA+AGG + chr8_4:49158455-49158474 Msa1330100:intron 35.0%
! TGAGCTTAACTCAGTTGATA+AGG - chr8_4:49158815-49158834 None:intergenic 35.0%
!! GTCTCGAGAGTATTTACAAT+TGG - chr8_4:49159091-49159110 None:intergenic 35.0%
!! TAGTTCTGGACCTAACTAAT+AGG - chr8_4:49159133-49159152 None:intergenic 35.0%
GTCCAGAACTAAGATATCAA+AGG + chr8_4:49159142-49159161 Msa1330100:intron 35.0%
CACCTTTGATATCTTAGTTC+TGG - chr8_4:49159147-49159166 None:intergenic 35.0%
AAAGGTGAAGGACAGTTTAA+AGG + chr8_4:49159160-49159179 Msa1330100:intron 35.0%
AAAAAGTTCATAGGTGTTCG+TGG + chr8_4:49159641-49159660 Msa1330100:intron 35.0%
AAAAGTTCATAGGTGTTCGT+GGG + chr8_4:49159642-49159661 Msa1330100:intron 35.0%
TTTAATCTACCAGTGAACCA+AGG + chr8_4:49159826-49159845 Msa1330100:intron 35.0%
GTTTACATCTTCTCTCTTGT+TGG + chr8_4:49159964-49159983 Msa1330100:CDS 35.0%
TTCCCCAATAAGAATCACTT+AGG - chr8_4:49159996-49160015 None:intergenic 35.0%
CAAAGCAAGGTATGTTGTAA+CGG - chr8_4:49160175-49160194 None:intergenic 35.0%
! TTTCCATTTCCACAACCTTT+TGG - chr8_4:49160204-49160223 None:intergenic 35.0%
GGAAATGGAAAACTTGAATG+TGG + chr8_4:49160213-49160232 Msa1330100:CDS 35.0%
! GGAACATTCAAGTTTGGAAA+TGG + chr8_4:49160236-49160255 Msa1330100:CDS 35.0%
AGGCTATCAGATAGATTGAT+AGG - chr8_4:49160272-49160291 None:intergenic 35.0%
TCAATCTATCTGATAGCCTT+AGG + chr8_4:49160273-49160292 Msa1330100:CDS 35.0%
! TATCTGATAGCCTTAGGAAA+TGG + chr8_4:49160279-49160298 Msa1330100:CDS 35.0%
TTGATATCCTCCATTTCCTA+AGG - chr8_4:49160292-49160311 None:intergenic 35.0%
CAACCAAACATTGCAACATT+TGG + chr8_4:49160309-49160328 Msa1330100:CDS 35.0%
TTGAGTGATCCTCATCAAAT+TGG - chr8_4:49160341-49160360 None:intergenic 35.0%
ATTTGATGAGGATCACTCAA+AGG + chr8_4:49160341-49160360 Msa1330100:CDS 35.0%
!! TTTTACTTGGCATTGAACCT+TGG + chr8_4:49160396-49160415 Msa1330100:CDS 35.0%
TGTTTGAGAAAAGTGAACCA+AGG - chr8_4:49160416-49160435 None:intergenic 35.0%
!! TTGGGCTATTTTGAAGATGA+AGG + chr8_4:49160441-49160460 Msa1330100:CDS 35.0%
!!! GCTCTTGTACTTTTTCTTGT+TGG + chr8_4:49160510-49160529 Msa1330100:CDS 35.0%
TTGAAGCAGCAAAAAACACT+TGG - chr8_4:49160590-49160609 None:intergenic 35.0%
!!! AAGTGTTTTTTGCTGCTTCA+AGG + chr8_4:49160589-49160608 Msa1330100:CDS 35.0%
!! TTTTGCTGCTTCAAGGAAAT+TGG + chr8_4:49160596-49160615 Msa1330100:CDS 35.0%
! TTTGCTGCTTCAAGGAAATT+GGG + chr8_4:49160597-49160616 Msa1330100:CDS 35.0%
GGAGTTCAAATGACATCAAA+TGG + chr8_4:49160618-49160637 Msa1330100:CDS 35.0%
CTTGTATGTCACAGATGAAA+AGG + chr8_4:49160647-49160666 Msa1330100:intron 35.0%
! CGACATAATGGTTTTTGATG+TGG - chr8_4:49160793-49160812 None:intergenic 35.0%
CATCAAAAACCATTATGTCG+TGG + chr8_4:49160793-49160812 Msa1330100:intron 35.0%
TTGTTTAATTACTCTACCGC+AGG - chr8_4:49160852-49160871 None:intergenic 35.0%
AGAGATTTAGAGGTCCAAAA+AGG + chr8_4:49161041-49161060 Msa1330100:CDS 35.0%
! AAAGATACCATGGGTTATGT+TGG - chr8_4:49161070-49161089 None:intergenic 35.0%
GTAATAGGACAAAGATACCA+TGG - chr8_4:49161080-49161099 None:intergenic 35.0%
! CTCAGTAGTTTTCACTCAAA+TGG + chr8_4:49161163-49161182 Msa1330100:CDS 35.0%
! GGAAATAGTGGTTTTCATTG+CGG - chr8_4:49161213-49161232 None:intergenic 35.0%
ACGGTAGAAGAAAATGAAGA+TGG - chr8_4:49161288-49161307 None:intergenic 35.0%
!!! TTTTTGAGTTTTCCGACAAG+TGG - chr8_4:49161323-49161342 None:intergenic 35.0%
ACTCACTGAACTTCAAAGAA+TGG + chr8_4:49161358-49161377 Msa1330100:CDS 35.0%
CTCACTGAACTTCAAAGAAT+GGG + chr8_4:49161359-49161378 Msa1330100:CDS 35.0%
GAACTTCAAAGAATGGGAAT+CGG + chr8_4:49161365-49161384 Msa1330100:CDS 35.0%
CGTTATAGCTATAATCGCAA+TGG + chr8_4:49161391-49161410 Msa1330100:CDS 35.0%
! CTGGAATAGTGGAATGTTAT+AGG + chr8_4:49161420-49161439 Msa1330100:CDS 35.0%
AGGCTTAAGTATGCAAAACA+AGG + chr8_4:49161440-49161459 Msa1330100:CDS 35.0%
ATTCCTCAGTATGCACTTAT+AGG + chr8_4:49161494-49161513 Msa1330100:CDS 35.0%
AAACTTGAATAGAGGTCACT+TGG + chr8_4:49161706-49161725 Msa1330100:CDS 35.0%
! GGATAGGTTTTTCTTCCTAT+TGG + chr8_4:49161727-49161746 Msa1330100:CDS 35.0%
AAGAAGTCAAAACAGCCAAT+AGG - chr8_4:49161745-49161764 None:intergenic 35.0%
CTTATATTGCATGTGCAAAG+TGG + chr8_4:49161777-49161796 Msa1330100:CDS 35.0%
GTGGTTTCAGAATATTCAGA+TGG + chr8_4:49161796-49161815 Msa1330100:CDS 35.0%
GATTATACTTTGCAGCTACT+AGG - chr8_4:49161848-49161867 None:intergenic 35.0%
GAATACAGTTAAAGAGACTC+AGG - chr8_4:49161978-49161997 None:intergenic 35.0%
GAAATTCATGGTTGTATCCA+TGG + chr8_4:49162043-49162062 Msa1330100:three_prime_UTR 35.0%
GTAAGTTCCATTGCTAATGA+TGG + chr8_4:49162148-49162167 Msa1330100:three_prime_UTR 35.0%
AACATGTCCATCATTAGCAA+TGG - chr8_4:49162158-49162177 None:intergenic 35.0%
TTTGGTGAGTTCCAATAGGA+TGG - chr8_4:49156488-49156507 None:intergenic 40.0%
!! TCGCAACTAGTGTTACTTAG+AGG + chr8_4:49157299-49157318 Msa1330100:intron 40.0%
!! TAAATTTTGAGTGTGCACGG+GGG + chr8_4:49157537-49157556 Msa1330100:intron 40.0%
TGATTCTTACTCGACCGTTT+CGG + chr8_4:49157922-49157941 Msa1330100:intron 40.0%
!!! CTGTCTCCTGTCGTTTTATA+AGG - chr8_4:49158009-49158028 None:intergenic 40.0%
AACGACAGGAGACAGAAAAT+AGG + chr8_4:49158014-49158033 Msa1330100:intron 40.0%
CATGTATGCATCATAACACG+TGG - chr8_4:49158157-49158176 None:intergenic 40.0%
TACTTATGGACATGAGTGCA+AGG + chr8_4:49158193-49158212 Msa1330100:intron 40.0%
!! ACTAGCCTTACATGAGATTG+TGG - chr8_4:49158404-49158423 None:intergenic 40.0%
ATCTCATGTAAGGCTAGTGA+AGG + chr8_4:49158406-49158425 Msa1330100:intron 40.0%
CTAACAAATCACCACTTGAG+TGG - chr8_4:49158658-49158677 None:intergenic 40.0%
!!! GATTTTTTTGGTGGTGGTCA+TGG + chr8_4:49158754-49158773 Msa1330100:intron 40.0%
GACGTATCAGAGTCATACAT+AGG + chr8_4:49159194-49159213 Msa1330100:intron 40.0%
! TTTTCTTTGCACACGCGAAA+AGG - chr8_4:49159234-49159253 None:intergenic 40.0%
CTAGCAACCTTAGCATTCTT+TGG + chr8_4:49159850-49159869 Msa1330100:CDS 40.0%
!! ACCTTAGCATTCTTTGGAGT+TGG + chr8_4:49159856-49159875 Msa1330100:CDS 40.0%
TCCAACTCCAAAGAATGCTA+AGG - chr8_4:49159860-49159879 None:intergenic 40.0%
CTGCTAACAATGTTAGCAAG+TGG + chr8_4:49159932-49159951 Msa1330100:CDS 40.0%
AACAATGTTAGCAAGTGGAC+TGG + chr8_4:49159937-49159956 Msa1330100:CDS 40.0%
! CTTTTGGTCTAAGCAAAGCA+AGG - chr8_4:49160188-49160207 None:intergenic 40.0%
CTTGCTTTGCTTAGACCAAA+AGG + chr8_4:49160186-49160205 Msa1330100:CDS 40.0%
TTGCTTAGACCAAAAGGTTG+TGG + chr8_4:49160192-49160211 Msa1330100:CDS 40.0%
AGACCAAAAGGTTGTGGAAA+TGG + chr8_4:49160198-49160217 Msa1330100:CDS 40.0%
! ATGTGGGGAACATTCAAGTT+TGG + chr8_4:49160230-49160249 Msa1330100:CDS 40.0%
GCACCAAATGTTGCAATGTT+TGG - chr8_4:49160315-49160334 None:intergenic 40.0%
ATGAAGGATTATGGGCTCTT+GGG + chr8_4:49160457-49160476 Msa1330100:CDS 40.0%
! ATTATGGGCTCTTGGGTTTT+GGG + chr8_4:49160464-49160483 Msa1330100:CDS 40.0%
ACTTGGCAGAATCTAGAAAG+AGG - chr8_4:49160573-49160592 None:intergenic 40.0%
TGTGTGGAGAATCTTTCTGT+TGG - chr8_4:49160688-49160707 None:intergenic 40.0%
AGAAAGATTCTCCACACACA+TGG + chr8_4:49160690-49160709 Msa1330100:intron 40.0%
CTTACTTGAAACCATGTGTG+TGG - chr8_4:49160704-49160723 None:intergenic 40.0%
CAATCTTGACCACGACATAA+TGG - chr8_4:49160805-49160824 None:intergenic 40.0%
TTATGTCGTGGTCAAGATTG+TGG + chr8_4:49160805-49160824 Msa1330100:intron 40.0%
CTTCGGAAAATAATGAGACG+TGG + chr8_4:49160877-49160896 Msa1330100:intron 40.0%
GATTTAGAGGTCCAAAAAGG+AGG + chr8_4:49161044-49161063 Msa1330100:CDS 40.0%
!!! TGCTGGTGGTATTTTGAAAC+TGG - chr8_4:49161234-49161253 None:intergenic 40.0%
ATAATCGCAATGGTTACAGC+TGG + chr8_4:49161401-49161420 Msa1330100:CDS 40.0%
AATGGTTACAGCTGGAATAG+TGG + chr8_4:49161409-49161428 Msa1330100:CDS 40.0%
CAAGCTCTCTAAGTATCTTC+TGG + chr8_4:49161468-49161487 Msa1330100:CDS 40.0%
TTCAATGCTCAAACACCTGA+TGG + chr8_4:49161557-49161576 Msa1330100:CDS 40.0%
TGCATGACAAGTATCTCACT+TGG + chr8_4:49161605-49161624 Msa1330100:CDS 40.0%
ATCCCTGGAAACTTGAATAG+AGG + chr8_4:49161698-49161717 Msa1330100:CDS 40.0%
! GACCTCTATTCAAGTTTCCA+GGG - chr8_4:49161703-49161722 None:intergenic 40.0%
! TGACCTCTATTCAAGTTTCC+AGG - chr8_4:49161704-49161723 None:intergenic 40.0%
TGAATAGAGGTCACTTGGAT+AGG + chr8_4:49161711-49161730 Msa1330100:CDS 40.0%
!!! ATAGTTTTAGGGCCTCTCTT+GGG + chr8_4:49162098-49162117 Msa1330100:three_prime_UTR 40.0%
TTGGATGAAAGCCGAAGACA+AGG - chr8_4:49156262-49156281 None:intergenic 45.0%
!! ATCACCAATGGCTTGCTTAG+AGG + chr8_4:49156355-49156374 Msa1330100:CDS 45.0%
TTGCTTAGAGGTCTGCAAAG+AGG + chr8_4:49156367-49156386 Msa1330100:CDS 45.0%
!! CTCTTGATGGGAGTGTTGAT+TGG + chr8_4:49156730-49156749 Msa1330100:CDS 45.0%
!! CAGATTTGGCTCTGTTTGCT+GGG - chr8_4:49156764-49156783 None:intergenic 45.0%
CAGCAAACAGAGCCAAATCT+GGG + chr8_4:49156763-49156782 Msa1330100:CDS 45.0%
AGCAAACCATCTCCCAGATT+TGG - chr8_4:49156778-49156797 None:intergenic 45.0%
! AAATCTGGGAGATGGTTTGC+TGG + chr8_4:49156777-49156796 Msa1330100:CDS 45.0%
GCTAGTGAAGGTCACCAATA+AGG + chr8_4:49158418-49158437 Msa1330100:intron 45.0%
TAAGCTTTGCACCACTCAAG+TGG + chr8_4:49158644-49158663 Msa1330100:intron 45.0%
TTTGCACACGCGAAAAGGTT+CGG - chr8_4:49159229-49159248 None:intergenic 45.0%
CATGTACATGTGCTCAAGTG+CGG + chr8_4:49159280-49159299 Msa1330100:intron 45.0%
ATGCTAAGGTTGCTAGACCT+TGG - chr8_4:49159846-49159865 None:intergenic 45.0%
!! ACCTAGTTCTGTTCCTGACA+AGG + chr8_4:49159884-49159903 Msa1330100:CDS 45.0%
!! CCTAGTTCTGTTCCTGACAA+GGG + chr8_4:49159885-49159904 Msa1330100:CDS 45.0%
! CTGATAGCCTTAGGAAATGG+AGG + chr8_4:49160282-49160301 Msa1330100:CDS 45.0%
!! TGGTGCTGACCAATTTGATG+AGG + chr8_4:49160329-49160348 Msa1330100:CDS 45.0%
GATGAAGGATTATGGGCTCT+TGG + chr8_4:49160456-49160475 Msa1330100:CDS 45.0%
! GATTATGGGCTCTTGGGTTT+TGG + chr8_4:49160463-49160482 Msa1330100:CDS 45.0%
CTAGAAAGAGGATTGCCACA+AGG - chr8_4:49160561-49160580 None:intergenic 45.0%
!! GGTTATGTTGGCCTCCTTTT+TGG - chr8_4:49161058-49161077 None:intergenic 45.0%
AAATGAAGATGGCTACGCTG+AGG - chr8_4:49161277-49161296 None:intergenic 45.0%
CAAGTGGATCAAGTACTCGA+CGG - chr8_4:49161307-49161326 None:intergenic 45.0%
CGAGTACTTGATCCACTTGT+CGG + chr8_4:49161308-49161327 Msa1330100:CDS 45.0%
TTGAAGTTCAGTGAGTCCCT+TGG - chr8_4:49161354-49161373 None:intergenic 45.0%
GCTCCTATAAGTGCATACTG+AGG - chr8_4:49161500-49161519 None:intergenic 45.0%
TGCACTTATAGGAGCTTCTG+AGG + chr8_4:49161505-49161524 Msa1330100:CDS 45.0%
CCAAAGCTCTTCAATCCATC+AGG - chr8_4:49161575-49161594 None:intergenic 45.0%
!! CCTGATGGATTGAAGAGCTT+TGG + chr8_4:49161572-49161591 Msa1330100:CDS 45.0%
TCAACTGAAGATCACATGCC+AGG + chr8_4:49161671-49161690 Msa1330100:CDS 45.0%
!!! GATAGTTTTAGGGCCTCTCT+TGG + chr8_4:49162097-49162116 Msa1330100:three_prime_UTR 45.0%
!! TTATAATATTAAAATGTTTA+TGG + chr8_4:49158896-49158915 Msa1330100:intron 5.0%
!! TATAATATTAAAATGTTTAT+GGG + chr8_4:49158897-49158916 Msa1330100:intron 5.0%
!! TTATAAAAACAAATAAATTT+AGG + chr8_4:49159313-49159332 Msa1330100:intron 5.0%
!! TAAAAAAAAAAAATAATGTA+TGG + chr8_4:49159696-49159715 Msa1330100:intron 5.0%
CAGACCTCTAAGCAAGCCAT+TGG - chr8_4:49156362-49156381 None:intergenic 50.0%
!! GATGGGAGTGTTGATTGGCA+TGG + chr8_4:49156735-49156754 Msa1330100:CDS 50.0%
!! CCAGATTTGGCTCTGTTTGC+TGG - chr8_4:49156765-49156784 None:intergenic 50.0%
CCAGCAAACAGAGCCAAATC+TGG + chr8_4:49156762-49156781 Msa1330100:CDS 50.0%
ACAGAGCCAAATCTGGGAGA+TGG + chr8_4:49156769-49156788 Msa1330100:CDS 50.0%
GGACACACTTATGCCACACA+TGG - chr8_4:49157224-49157243 None:intergenic 50.0%
CGTGGCAAATACCTACGTCA+TGG - chr8_4:49158139-49158158 None:intergenic 50.0%
CAATTGGTCGATACGGCCAA+AGG - chr8_4:49159075-49159094 None:intergenic 50.0%
GTTGCTAGACCTTGGTTCAC+TGG - chr8_4:49159838-49159857 None:intergenic 50.0%
CCCTTGTCAGGAACAGAACT+AGG - chr8_4:49159888-49159907 None:intergenic 50.0%
! TCTGTTCCTGACAAGGGTGT+TGG + chr8_4:49159891-49159910 Msa1330100:CDS 50.0%
!! CTGTTCCTGACAAGGGTGTT+GGG + chr8_4:49159892-49159911 Msa1330100:CDS 50.0%
!!! TTGGGTTTTGGGCTTCTGCT+GGG + chr8_4:49160475-49160494 Msa1330100:CDS 50.0%
! TTCTGCTGGGTCTGCCTTTT+TGG + chr8_4:49160488-49160507 Msa1330100:CDS 50.0%
CTTCAATAGCGGCTACGATG+CGG + chr8_4:49160761-49160780 Msa1330100:intron 50.0%
AAGGAGGCCAACATAACCCA+TGG + chr8_4:49161060-49161079 Msa1330100:CDS 50.0%
! AAGCTAGACATGCTTGCTGG+TGG - chr8_4:49161248-49161267 None:intergenic 50.0%
TCGAAGCTAGACATGCTTGC+TGG - chr8_4:49161251-49161270 None:intergenic 50.0%
CTGAAGATCACATGCCAGGA+TGG + chr8_4:49161675-49161694 Msa1330100:CDS 50.0%
AAGTTTCCAGGGATCCATCC+TGG - chr8_4:49161692-49161711 None:intergenic 50.0%
GAACAAGGAAGACCCAAGAG+AGG - chr8_4:49162113-49162132 None:intergenic 50.0%
CTTGACCCAACACCCTTGTC+AGG - chr8_4:49159900-49159919 None:intergenic 55.0%
!!! CTTGGGTTTTGGGCTTCTGC+TGG + chr8_4:49160474-49160493 Msa1330100:CDS 55.0%
ATAGCGGCTACGATGCGGTT+TGG + chr8_4:49160766-49160785 Msa1330100:intron 55.0%
CACATGCCAGGATGGATCCC+TGG + chr8_4:49161683-49161702 Msa1330100:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 49156194 49162218 49156194 ID=Msa1330100;Name=Msa1330100
chr8_4 mRNA 49156194 49162218 49156194 ID=Msa1330100-mRNA-1;Parent=Msa1330100;Name=Msa1330100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.6|1|1|1|5|353|625
chr8_4 exon 49156194 49156388 49156194 ID=Msa1330100-mRNA-1:exon:14164;Parent=Msa1330100-mRNA-1
chr8_4 exon 49156699 49156813 49156699 ID=Msa1330100-mRNA-1:exon:14165;Parent=Msa1330100-mRNA-1
chr8_4 exon 49159839 49160056 49159839 ID=Msa1330100-mRNA-1:exon:14166;Parent=Msa1330100-mRNA-1
chr8_4 exon 49160156 49160649 49160156 ID=Msa1330100-mRNA-1:exon:14167;Parent=Msa1330100-mRNA-1
chr8_4 exon 49161010 49162218 49161010 ID=Msa1330100-mRNA-1:exon:14168;Parent=Msa1330100-mRNA-1
chr8_4 CDS 49156194 49156388 49156194 ID=Msa1330100-mRNA-1:cds;Parent=Msa1330100-mRNA-1
chr8_4 CDS 49156699 49156813 49156699 ID=Msa1330100-mRNA-1:cds;Parent=Msa1330100-mRNA-1
chr8_4 CDS 49159839 49160056 49159839 ID=Msa1330100-mRNA-1:cds;Parent=Msa1330100-mRNA-1
chr8_4 CDS 49160156 49160649 49160156 ID=Msa1330100-mRNA-1:cds;Parent=Msa1330100-mRNA-1
chr8_4 CDS 49161010 49161865 49161010 ID=Msa1330100-mRNA-1:cds;Parent=Msa1330100-mRNA-1
chr8_4 three_prime_UTR 49161866 49162218 49161866 ID=Msa1330100-mRNA-1:three_prime_utr;Parent=Msa1330100-mRNA-1
Gene Sequence

>Msa1330100

ATGCGATTCTTTATTCCTCTATATATAGTGAATACTTCCACACACTCTGTTTCATCATTAAATCTCCTTGTCTTCGGCTTTCATCCAAATCAACAACAATCTTCCTCTGCTTCATCATTTTTCTCACTCTTTTTCTTCCTTTTTGTCTTTGAAACTTTGACATCACCAATGGCTTGCTTAGAGGTCTGCAAAGAGGGGAAGTTCAAAGAAGAAACAGAAAAGTTAACTCTTGATGGGAGTGTTGATTGGCATGGTCGCCCAGCAAACAGAGCCAAATCTGGGAGATGGTTTGCTGGAACTATTATACTCTTGAACCAAGGTCTAGCAACCTTAGCATTCTTTGGAGTTGGAGTGAACCTAGTTCTGTTCCTGACAAGGGTGTTGGGTCAAGACAATGCTGCTGCTGCTAACAATGTTAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTTGGTGCTTTCCTAAGTGATTCTTATTGGGGAAGATACAAAACATGTGCTATCTTTCAAGGCATTTTTGTAACTGGTCTAGTATCTTTGTCCGTTACAACATACCTTGCTTTGCTTAGACCAAAAGGTTGTGGAAATGGAAAACTTGAATGTGGGGAACATTCAAGTTTGGAAATGGGAATGTTCTACCTATCAATCTATCTGATAGCCTTAGGAAATGGAGGATATCAACCAAACATTGCAACATTTGGTGCTGACCAATTTGATGAGGATCACTCAAAGGAGAGTTATTCAAAAGTGGCATTTTTTAGCTACTTTTACTTGGCATTGAACCTTGGTTCACTTTTCTCAAACACTATTTTGGGCTATTTTGAAGATGAAGGATTATGGGCTCTTGGGTTTTGGGCTTCTGCTGGGTCTGCCTTTTTGGCTCTTGTACTTTTTCTTGTTGGCACCCCAAAATATAGACACTTTAAACCTTGTGGCAATCCTCTTTCTAGATTCTGCCAAGTGTTTTTTGCTGCTTCAAGGAAATTGGGAGTTCAAATGACATCAAATGGAGATGACTTGTTTTTGGATAGGGCAGCTTATATAACTTCAAGAGATTTAGAGGTCCAAAAAGGAGGCCAACATAACCCATGGTATCTTTGTCCTATTACTCAAGTTGAAGAAGTAAAATGCATACTAAGACTTCTTCCAATTTGGCTTTGCACAATAATCTACTCAGTAGTTTTCACTCAAATGGCTTCTCTTTTTGTGGAGCAAGGCGCCGCAATGAAAACCACTATTTCCAGTTTCAAAATACCACCAGCAAGCATGTCTAGCTTCGACATCCTCAGCGTAGCCATCTTCATTTTCTTCTACCGTCGAGTACTTGATCCACTTGTCGGAAAACTCAAAAAAACAAGTTCCAAGGGACTCACTGAACTTCAAAGAATGGGAATCGGTCTCGTTATAGCTATAATCGCAATGGTTACAGCTGGAATAGTGGAATGTTATAGGCTTAAGTATGCAAAACAAGGTGACGCAAGCTCTCTAAGTATCTTCTGGCAAATTCCTCAGTATGCACTTATAGGAGCTTCTGAGGTTTTTATGTATGTAGGACAATTAGAATTCTTCAATGCTCAAACACCTGATGGATTGAAGAGCTTTGGAAGTGCACTTTGCATGACAAGTATCTCACTTGGTAACTATGTGAGTAGCTTAATTGTTAGTATTGTTATGAAGATTTCAACTGAAGATCACATGCCAGGATGGATCCCTGGAAACTTGAATAGAGGTCACTTGGATAGGTTTTTCTTCCTATTGGCTGTTTTGACTTCTTTAGATTTGATTGCTTATATTGCATGTGCAAAGTGGTTTCAGAATATTCAGATGGAATGCAAATATGATAACAATGATGAGCCTAGTAGCTGCAAAGTATAA
Protein sequence

>Msa1330100

MRFFIPLYIVNTSTHSVSSLNLLVFGFHPNQQQSSSASSFFSLFFFLFVFETLTSPMACLEVCKEGKFKEETEKLTLDGSVDWHGRPANRAKSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLVSLSVTTYLALLRPKGCGNGKLECGEHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEDHSKESYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFLALVLFLVGTPKYRHFKPCGNPLSRFCQVFFAASRKLGVQMTSNGDDLFLDRAAYITSRDLEVQKGGQHNPWYLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISSFKIPPASMSSFDILSVAIFIFFYRRVLDPLVGKLKKTSSKGLTELQRMGIGLVIAIIAMVTAGIVECYRLKYAKQGDASSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFFFLLAVLTSLDLIAYIACAKWFQNIQMECKYDNNDEPSSCKV*