AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1256710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256710 MtrunA17_Chr4g0054891 98.611 648 9 0 1 648 21 668 0.0 1318
Msa1256710 MtrunA17_Chr5g0400371 80.165 605 107 3 57 648 71 675 0.0 983
Msa1256710 MtrunA17_Chr7g0217461 70.840 583 155 5 69 642 3 579 0.0 816
Msa1256710 MtrunA17_Chr1g0213711 58.711 574 225 8 73 645 9 571 0.0 663
Msa1256710 MtrunA17_Chr7g0214461 59.246 557 220 4 84 639 72 622 0.0 659
Msa1256710 MtrunA17_Chr7g0218851 59.227 569 214 7 84 642 40 600 0.0 648
Msa1256710 MtrunA17_Chr4g0011471 53.947 532 239 3 104 631 30 559 0.0 566
Msa1256710 MtrunA17_Chr4g0011041 48.592 568 286 4 69 631 15 581 0.0 530
Msa1256710 MtrunA17_Chr8g0375311 43.915 567 307 4 70 630 20 581 3.83e-167 490
Msa1256710 MtrunA17_Chr8g0375291 44.128 562 303 4 70 625 20 576 3.72e-164 483
Msa1256710 MtrunA17_Chr8g0375341 42.681 567 314 4 70 630 20 581 6.39e-161 474
Msa1256710 MtrunA17_Chr3g0104011 44.346 566 301 7 70 628 2 560 2.38e-159 470
Msa1256710 MtrunA17_Chr8g0375351 42.328 567 316 4 70 630 20 581 2.25e-158 468
Msa1256710 MtrunA17_Chr4g0005901 43.182 572 311 6 61 626 3 566 1.75e-156 462
Msa1256710 MtrunA17_Chr7g0241741 43.009 565 308 6 71 629 3 559 2.80e-155 459
Msa1256710 MtrunA17_Chr8g0375321 42.124 565 316 4 71 629 18 577 7.77e-155 459
Msa1256710 MtrunA17_Chr8g0375331 42.077 568 316 6 70 629 2 564 2.02e-150 447
Msa1256710 MtrunA17_Chr7g0261811 37.543 586 345 6 73 647 10 585 3.09e-142 427
Msa1256710 MtrunA17_Chr7g0261771 37.889 578 340 5 60 628 1 568 4.21e-141 424
Msa1256710 MtrunA17_Chr8g0375361 41.126 586 332 5 51 630 2 580 3.95e-140 421
Msa1256710 MtrunA17_Chr7g0261881 36.177 586 353 6 73 647 10 585 1.27e-139 420
Msa1256710 MtrunA17_Chr3g0142101 37.311 595 356 9 57 647 1 582 7.00e-134 405
Msa1256710 MtrunA17_Chr1g0187241 37.057 564 334 6 64 618 2 553 1.53e-132 402
Msa1256710 MtrunA17_Chr1g0166791 36.332 567 344 5 70 628 4 561 4.35e-129 393
Msa1256710 MtrunA17_Chr5g0399061 39.153 567 327 9 73 628 10 569 8.04e-129 392
Msa1256710 MtrunA17_Chr7g0261791 37.566 567 332 7 73 628 12 567 1.46e-128 392
Msa1256710 MtrunA17_Chr5g0399071 36.731 569 340 7 72 628 7 567 7.78e-126 384
Msa1256710 MtrunA17_Chr3g0142091 36.021 583 359 7 69 647 3 575 2.08e-124 380
Msa1256710 MtrunA17_Chr7g0261851 37.370 578 340 6 60 628 1 565 2.48e-123 378
Msa1256710 MtrunA17_Chr1g0166711 36.299 562 342 4 74 628 9 561 4.34e-123 377
Msa1256710 MtrunA17_Chr3g0112671 36.007 586 350 12 64 639 6 576 2.08e-122 375
Msa1256710 MtrunA17_Chr1g0166741 35.370 540 339 4 74 612 11 541 2.86e-119 367
Msa1256710 MtrunA17_Chr4g0063591 37.919 567 334 9 70 629 2 557 2.53e-117 362
Msa1256710 MtrunA17_Chr7g0240381 35.103 584 355 12 69 647 7 571 9.69e-117 360
Msa1256710 MtrunA17_Chr4g0056431 36.380 569 347 8 71 628 6 570 6.68e-115 356
Msa1256710 MtrunA17_Chr1g0166771 36.111 504 312 4 111 613 12 506 1.91e-113 351
Msa1256710 MtrunA17_Chr3g0114501 35.651 561 343 8 70 622 2 552 1.06e-112 350
Msa1256710 MtrunA17_Chr5g0422881 34.912 570 354 7 90 648 20 583 2.74e-111 347
Msa1256710 MtrunA17_Chr4g0008651 33.048 584 374 10 64 641 9 581 2.87e-109 342
Msa1256710 MtrunA17_Chr3g0077151 37.143 560 298 14 76 621 14 533 3.57e-109 340
Msa1256710 MtrunA17_Chr5g0439381 35.417 576 350 8 69 641 10 566 1.51e-106 334
Msa1256710 MtrunA17_Chr3g0112611 33.167 600 370 14 60 642 1 586 4.35e-106 333
Msa1256710 MtrunA17_Chr4g0014791 35.512 566 324 11 71 626 10 544 2.69e-105 330
Msa1256710 MtrunA17_Chr4g0014871 34.643 560 328 11 77 626 17 548 3.61e-104 327
Msa1256710 MtrunA17_Chr4g0059991 32.373 590 381 5 70 648 5 587 6.19e-104 328
Msa1256710 MtrunA17_Chr7g0261751 37.166 487 275 7 60 516 1 486 1.14e-103 325
Msa1256710 MtrunA17_Chr4g0014841 36.042 566 321 10 71 626 10 544 2.39e-103 325
Msa1256710 MtrunA17_Chr4g0014801 35.366 574 325 12 70 626 2 546 8.41e-103 323
Msa1256710 MtrunA17_Chr7g0261661 37.609 460 266 6 178 628 3 450 3.64e-102 320
Msa1256710 MtrunA17_Chr2g0276751 34.513 565 342 9 70 628 18 560 2.56e-101 321
Msa1256710 MtrunA17_Chr8g0353031 34.331 568 334 10 92 644 20 563 2.66e-101 320
Msa1256710 MtrunA17_Chr7g0255601 33.512 561 358 9 77 628 14 568 9.25e-99 315
Msa1256710 MtrunA17_Chr4g0014781 34.859 568 327 13 71 626 10 546 4.99e-98 311
Msa1256710 MtrunA17_Chr7g0214731 32.581 620 374 14 55 639 16 626 7.04e-98 313
Msa1256710 MtrunA17_Chr7g0255621 31.434 579 382 8 73 642 3 575 9.23e-98 312
Msa1256710 MtrunA17_Chr4g0059981 32.609 552 355 6 96 634 37 584 2.50e-97 311
Msa1256710 MtrunA17_Chr8g0362711 33.333 561 364 5 70 622 4 562 5.65e-97 309
Msa1256710 MtrunA17_Chr2g0284701 31.779 579 375 10 69 629 10 586 7.24e-97 309
Msa1256710 MtrunA17_Chr5g0415791 32.240 549 361 6 90 629 29 575 2.00e-95 306
Msa1256710 MtrunA17_Chr4g0059971 30.277 578 389 5 64 629 7 582 4.33e-95 305
Msa1256710 MtrunA17_Chr1g0193391 31.453 585 362 11 69 647 4 555 1.96e-94 303
Msa1256710 MtrunA17_Chr8g0362781 30.944 572 375 7 70 629 16 579 6.94e-94 301
Msa1256710 MtrunA17_Chr7g0271221 31.670 581 362 11 69 645 4 553 3.89e-93 299
Msa1256710 MtrunA17_Chr1g0166731 36.601 459 275 4 177 628 9 458 3.98e-93 296
Msa1256710 MtrunA17_Chr7g0255611 31.834 578 377 10 60 628 1 570 4.71e-93 299
Msa1256710 MtrunA17_Chr5g0415961 32.574 571 354 9 78 629 12 570 3.68e-92 296
Msa1256710 MtrunA17_Chr8g0379971 32.264 561 348 8 73 602 3 562 6.64e-90 291
Msa1256710 MtrunA17_Chr3g0133341 30.756 569 365 8 86 641 10 562 2.62e-89 288
Msa1256710 MtrunA17_Chr4g0069581 33.333 525 334 7 108 629 4 515 1.17e-87 284
Msa1256710 MtrunA17_Chr7g0261731 39.665 358 203 4 60 414 1 348 5.07e-87 276
Msa1256710 MtrunA17_Chr3g0082631 35.335 433 258 7 212 628 30 456 1.62e-85 276
Msa1256710 MtrunA17_Chr4g0014861 35.748 428 248 9 209 626 13 423 4.78e-82 265
Msa1256710 MtrunA17_Chr8g0362801 32.017 481 310 9 178 648 1 474 8.46e-79 258
Msa1256710 MtrunA17_Chr4g0060001 29.947 571 385 8 64 624 2 567 2.22e-78 261
Msa1256710 MtrunA17_Chr1g0157601 29.304 546 360 9 102 636 27 557 4.48e-78 259
Msa1256710 MtrunA17_Chr1g0157611 30.142 564 366 9 90 641 16 563 5.61e-77 256
Msa1256710 MtrunA17_Chr8g0390331 29.834 543 363 9 92 625 17 550 5.09e-76 254
Msa1256710 MtrunA17_Chr1g0157621 29.650 543 353 10 111 641 1 526 9.56e-76 253
Msa1256710 MtrunA17_Chr7g0240271 28.376 585 406 9 67 641 2 583 2.66e-75 252
Msa1256710 MtrunA17_Chr5g0415841 31.140 456 303 6 178 625 1 453 6.41e-74 245
Msa1256710 MtrunA17_Chr6g0451841 30.741 553 327 11 101 630 16 535 1.29e-71 241
Msa1256710 MtrunA17_Chr8g0379991 31.802 566 338 10 108 629 1 562 1.44e-71 242
Msa1256710 MtrunA17_Chr1g0177591 29.553 582 350 19 61 625 23 561 3.73e-69 235
Msa1256710 MtrunA17_Chr2g0331511 28.090 534 367 8 102 625 33 559 5.13e-68 234
Msa1256710 MtrunA17_Chr4g0003761 28.442 552 375 10 102 642 42 584 7.21e-68 233
Msa1256710 MtrunA17_Chr2g0325951 29.391 575 367 13 77 639 1 548 8.03e-68 231
Msa1256710 MtrunA17_Chr2g0325961 28.671 572 376 11 77 639 1 549 2.98e-67 229
Msa1256710 MtrunA17_Chr7g0235521 30.670 463 307 9 190 641 13 472 5.40e-67 227
Msa1256710 MtrunA17_Chr2g0331521 27.915 566 388 9 73 625 2 560 1.70e-66 228
Msa1256710 MtrunA17_Chr7g0240281 28.283 594 405 10 65 645 4 589 4.20e-66 228
Msa1256710 MtrunA17_Chr2g0331481 28.885 547 346 12 102 625 37 563 6.16e-66 228
Msa1256710 MtrunA17_Chr7g0240131 30.388 464 309 9 190 642 13 473 1.50e-65 223
Msa1256710 MtrunA17_Chr2g0326211 28.769 577 368 11 77 639 1 548 3.09e-65 224
Msa1256710 MtrunA17_Chr7g0240181 30.238 463 309 9 190 641 13 472 1.28e-64 221
Msa1256710 MtrunA17_Chr7g0240211 30.238 463 309 9 190 641 13 472 1.30e-64 221
Msa1256710 MtrunA17_Chr2g0331471 27.796 608 386 16 45 625 45 626 3.30e-64 224
Msa1256710 MtrunA17_Chr1g0147631 28.415 549 372 10 102 639 37 575 9.42e-64 221
Msa1256710 MtrunA17_Chr3g0142111 37.224 317 192 4 57 369 11 324 1.78e-62 211
Msa1256710 MtrunA17_Chr1g0177611 31.690 426 272 11 206 625 20 432 1.01e-61 212
Msa1256710 MtrunA17_Chr7g0240151 28.788 462 299 9 190 641 13 454 1.83e-58 204
Msa1256710 MtrunA17_Chr1g0177631 30.588 425 278 10 206 625 20 432 1.32e-56 198
Msa1256710 MtrunA17_Chr3g0112631 35.274 292 170 8 364 642 3 288 3.53e-56 192
Msa1256710 MtrunA17_Chr2g0331461 28.545 536 362 8 102 625 37 563 1.09e-55 200
Msa1256710 MtrunA17_Chr3g0142121 36.042 283 170 5 365 646 11 283 7.62e-55 188
Msa1256710 MtrunA17_Chr7g0234151 29.817 436 272 10 197 628 13 418 8.19e-44 162
Msa1256710 MtrunA17_Chr7g0234381 30.536 429 267 10 201 628 20 418 1.66e-43 161
Msa1256710 MtrunA17_Chr4g0060071 34.728 239 148 4 391 622 52 289 2.57e-43 157
Msa1256710 MtrunA17_Chr7g0234181 29.639 415 257 9 217 628 31 413 4.76e-40 151
Msa1256710 MtrunA17_Chr7g0261721 36.923 195 116 2 440 628 5 198 1.13e-36 137
Msa1256710 MtrunA17_Chr3g0112651 33.333 189 120 3 177 365 21 203 1.99e-27 110
Msa1256710 MtrunA17_Chr1g0147591 23.196 194 140 3 219 409 9 196 3.16e-22 95.1
Msa1256710 MtrunA17_Chr7g0261831 32.278 158 96 3 321 476 3 151 1.64e-21 93.6
Msa1256710 MtrunA17_Chr7g0261671 37.391 115 72 0 60 174 2 116 4.24e-21 89.4
Msa1256710 MtrunA17_Chr2g0326221 29.817 218 128 6 409 625 24 217 1.08e-20 91.3
Msa1256710 MtrunA17_Chr4g0060061 36.207 116 74 0 212 327 18 133 6.19e-19 83.6
Msa1256710 MtrunA17_Chr4g0014851 42.424 99 57 0 77 175 17 115 1.15e-18 83.6
Msa1256710 MtrunA17_Chr1g0166721 35.922 103 63 1 64 166 2 101 6.01e-18 81.3
Msa1256710 MtrunA17_Chr3g0112661 37.500 112 64 1 78 189 19 124 3.86e-17 78.6
Msa1256710 MtrunA17_Chr8g0382591 36.449 107 66 2 364 468 3 109 1.52e-12 65.5
Msa1256710 MtrunA17_Chr3g0082621 45.312 64 35 0 112 175 8 71 1.95e-11 60.8
Msa1256710 MtrunA17_Chr4g0060051 30.769 104 72 0 70 173 2 105 2.85e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256710 AT1G32450.1 73.401 594 149 4 57 641 1 594 0.0 899
Msa1256710 AT4G21680.1 68.815 574 167 4 73 637 9 579 0.0 790
Msa1256710 AT5G19640.1 60.294 544 198 5 93 634 60 587 0.0 656
Msa1256710 AT3G54140.1 43.993 566 305 6 70 629 2 561 7.45e-169 494
Msa1256710 AT3G54140.2 43.993 566 305 6 70 629 2 561 7.45e-169 494
Msa1256710 AT2G02040.1 42.234 573 320 5 64 630 13 580 1.02e-159 471
Msa1256710 AT1G62200.1 43.013 551 307 5 78 626 38 583 3.77e-158 468
Msa1256710 AT1G62200.2 40.862 580 307 6 78 626 38 612 9.50e-152 452
Msa1256710 AT1G62200.3 40.862 580 307 6 78 626 52 626 1.10e-151 452
Msa1256710 AT5G01180.2 39.859 567 326 6 69 628 2 560 1.39e-146 437
Msa1256710 AT5G01180.3 39.859 567 326 6 69 628 2 560 1.39e-146 437
Msa1256710 AT5G01180.1 39.859 567 326 6 69 628 2 560 1.39e-146 437
Msa1256710 AT2G02020.1 40.175 570 288 9 60 622 11 534 2.58e-139 418
Msa1256710 AT2G26690.1 38.516 566 331 7 70 629 2 556 3.94e-123 377
Msa1256710 AT3G54450.1 37.279 566 316 9 89 639 9 550 1.14e-122 375
Msa1256710 AT5G46050.1 35.507 552 336 6 69 611 4 544 8.03e-120 369
Msa1256710 AT2G02020.2 36.842 570 286 11 60 622 11 513 1.15e-116 359
Msa1256710 AT5G46040.1 34.539 553 342 6 69 612 4 545 8.49e-115 356
Msa1256710 AT2G26690.2 39.048 525 303 7 111 629 10 523 1.38e-113 352
Msa1256710 AT1G12110.1 36.224 588 356 9 69 644 5 585 1.52e-113 353
Msa1256710 AT2G26690.3 39.155 521 300 7 115 629 2 511 1.84e-113 351
Msa1256710 AT2G37900.1 32.975 558 361 7 70 626 16 561 5.28e-111 346
Msa1256710 AT2G40460.1 36.170 564 336 7 70 625 2 549 2.71e-110 344
Msa1256710 AT5G13400.1 34.662 577 354 7 81 641 52 621 2.18e-108 340
Msa1256710 AT3G53960.1 32.799 561 364 7 70 625 15 567 2.94e-107 337
Msa1256710 AT1G69870.1 33.640 544 353 6 92 629 51 592 3.72e-105 332
Msa1256710 AT1G68570.1 34.349 591 366 9 60 641 1 578 3.12e-104 329
Msa1256710 AT3G21670.1 35.106 564 335 8 78 629 12 556 5.00e-102 323
Msa1256710 AT1G59740.1 34.075 584 366 12 64 640 13 584 1.18e-101 322
Msa1256710 AT1G68570.2 34.615 546 345 6 105 641 6 548 4.17e-100 317
Msa1256710 AT1G72140.1 34.103 563 318 9 80 626 22 547 1.03e-97 310
Msa1256710 AT1G27080.1 35.484 558 345 10 92 644 14 561 1.59e-96 308
Msa1256710 AT1G72130.1 35.912 543 299 9 93 626 26 528 6.24e-96 305
Msa1256710 AT1G22540.1 34.435 575 340 10 70 634 8 555 7.24e-96 306
Msa1256710 AT2G37900.2 32.657 493 319 7 135 626 2 482 3.24e-95 302
Msa1256710 AT5G46050.2 36.795 443 258 7 178 611 3 432 2.55e-92 294
Msa1256710 AT1G72125.1 33.569 566 339 9 73 626 11 551 7.82e-91 293
Msa1256710 AT1G33440.1 33.391 575 361 10 61 628 8 567 8.58e-91 294
Msa1256710 AT1G27080.2 34.972 529 329 10 121 644 1 519 3.09e-90 290
Msa1256710 AT1G72120.1 33.392 566 336 10 73 626 11 547 5.70e-90 290
Msa1256710 AT1G69850.1 31.404 570 370 6 71 622 4 570 2.49e-89 290
Msa1256710 AT1G22550.1 33.217 575 330 12 74 626 12 554 7.67e-89 288
Msa1256710 AT1G18880.1 30.906 563 371 6 96 645 23 580 2.20e-86 282
Msa1256710 AT1G22570.1 31.972 563 337 13 67 609 2 538 1.52e-85 279
Msa1256710 AT5G62680.1 30.199 553 358 8 96 629 47 590 1.14e-83 275
Msa1256710 AT3G47960.1 30.254 552 357 8 96 629 65 606 1.84e-83 275
Msa1256710 AT5G62730.1 29.698 596 356 9 55 622 16 576 2.57e-83 274
Msa1256710 AT1G27040.1 30.018 563 371 6 78 631 13 561 8.79e-83 272
Msa1256710 AT1G27040.2 30.018 563 371 6 78 631 9 557 9.41e-83 271
Msa1256710 AT1G22570.2 32.233 515 306 12 112 609 13 501 2.74e-80 264
Msa1256710 AT5G14940.1 30.541 573 326 15 101 642 16 547 1.20e-78 260
Msa1256710 AT3G45720.1 27.872 531 361 7 114 641 41 552 1.57e-78 260
Msa1256710 AT3G45650.1 29.055 561 364 9 73 625 3 537 5.48e-77 256
Msa1256710 AT1G27040.3 30.206 533 349 6 108 631 11 529 6.16e-77 255
Msa1256710 AT3G45710.1 27.599 558 383 8 92 647 21 559 8.28e-77 256
Msa1256710 AT1G72130.2 35.172 435 243 8 201 626 6 410 4.91e-76 249
Msa1256710 AT1G72130.3 35.172 435 243 8 201 626 6 410 4.91e-76 249
Msa1256710 AT3G45680.1 27.993 568 385 9 78 643 8 553 1.88e-75 252
Msa1256710 AT3G45660.2 28.007 607 395 11 43 641 1 573 5.84e-75 251
Msa1256710 AT5G62730.2 29.455 550 328 8 98 622 3 517 1.39e-74 249
Msa1256710 AT3G45660.1 28.648 562 366 10 88 641 18 552 2.48e-74 249
Msa1256710 AT3G45660.3 28.648 562 366 10 88 641 18 552 2.48e-74 249
Msa1256710 AT1G52190.1 27.911 541 365 10 102 625 31 563 1.13e-72 246
Msa1256710 AT3G45650.2 27.939 587 363 10 73 625 3 563 2.38e-72 244
Msa1256710 AT3G16180.1 29.264 557 367 12 86 625 16 562 4.91e-72 244
Msa1256710 AT3G25260.1 28.804 552 337 12 82 626 11 513 6.59e-69 233
Msa1256710 AT3G45700.1 25.887 564 388 11 82 642 5 541 1.24e-67 231
Msa1256710 AT3G01350.1 28.325 579 341 13 101 642 16 557 4.59e-67 230
Msa1256710 AT1G69860.1 30.297 538 359 9 96 629 22 547 1.01e-65 226
Msa1256710 AT3G45690.1 26.355 535 334 9 110 643 36 511 2.31e-62 216
Msa1256710 AT5G28470.2 26.306 536 387 5 90 621 15 546 5.91e-62 216
Msa1256710 AT5G28470.1 26.119 536 386 6 90 621 15 544 3.77e-59 208
Msa1256710 AT3G25280.1 27.907 559 339 15 82 626 11 519 2.35e-58 205
Msa1256710 AT5G11570.1 28.302 530 297 11 102 626 23 474 1.22e-54 194
Msa1256710 AT2G38100.2 25.192 520 327 18 120 621 2 477 1.47e-33 135
Msa1256710 AT2G38100.3 25.283 530 333 19 110 621 15 499 1.54e-33 135
Msa1256710 AT2G38100.1 25.283 530 333 19 110 621 9 493 1.81e-33 135

Find 138 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGGGCTCTTGGGTTT+TGG 0.139139 8_2:+56954706 Msa1256710:CDS
GGTTTAAAGTGTCTATATTT+TGG 0.157297 8_2:-56954780 None:intergenic
CCAGATTTGGCTCTGTTTGC+TGG 0.157495 8_2:-56950282 None:intergenic
CTTTCCTTAGTGATTCTTAT+TGG 0.168379 8_2:+56954232 Msa1256710:CDS
TACTAAGACTTCTTCCAATT+TGG 0.183807 8_2:+56955550 Msa1256710:CDS
CTAGCAACCTTAGCATTCTT+TGG 0.234711 8_2:+56954093 Msa1256710:CDS
TTTCCTTAGTGATTCTTATT+GGG 0.235185 8_2:+56954233 Msa1256710:CDS
ACTTCTTCAACTTGAGTAAT+AGG 0.241585 8_2:-56955519 None:intergenic
ATTCCTCAGTATGCACTTAT+AGG 0.250210 8_2:+56955921 Msa1256710:CDS
TTTGCTGCTTCAAGGAAATT+AGG 0.280281 8_2:+56954840 Msa1256710:CDS
TATAACTTCAAGAGATTTAG+AGG 0.282564 8_2:+56955458 Msa1256710:CDS
GTTTACATCTTCTCTCTTGT+TGG 0.299285 8_2:+56954207 Msa1256710:CDS
GAGGAAGATTGTTGTTGATT+TGG 0.311217 8_2:-56949779 None:intergenic
TCAAAGTTTCAAAGACAAAA+AGG 0.325831 8_2:-56949832 None:intergenic
ATTATTGTGCAAAGCCAAAT+TGG 0.326777 8_2:-56955564 None:intergenic
TTTCCATTTCCACAACCTTT+TGG 0.329693 8_2:-56954444 None:intergenic
TTAAAGAGACTCAGGTAAAA+AGG 0.330271 8_2:-56956394 None:intergenic
CAACCAAACATTGCAACATT+TGG 0.338350 8_2:+56954552 Msa1256710:CDS
TGACCTCTATTCAAGTTTCC+AGG 0.340603 8_2:-56956128 None:intergenic
AGCAAACCATCTCCCAGATT+TGG 0.342083 8_2:-56950295 None:intergenic
TTTATGTACTTTGAAATTCA+TGG 0.344293 8_2:+56956458 Msa1256710:three_prime_UTR
AGAGATTTAGAGGTCCAAAA+AGG 0.353250 8_2:+56955468 Msa1256710:CDS
ATGTTAACACTTCTCCATAT+TGG 0.354261 8_2:-56956299 None:intergenic
AAGTATAATCATTTCCAATA+TGG 0.355664 8_2:+56956285 Msa1256710:exon
ACAGAAGAGTTAACTCTTGA+TGG 0.370181 8_2:+56950237 Msa1256710:CDS
GGAACATTCAAGTTTGGAAA+TGG 0.377855 8_2:+56954479 Msa1256710:CDS
ATGTGGGGAACATTCAAGTT+TGG 0.379230 8_2:+56954473 Msa1256710:CDS
CCTGATGGATTGAAGAGCTT+TGG 0.380582 8_2:+56955999 Msa1256710:CDS
AGACCAAAAGGTTGTGGAAA+TGG 0.381408 8_2:+56954441 Msa1256710:CDS
CCAGCAAACAGAGCCAAATC+TGG 0.383414 8_2:+56950282 Msa1256710:CDS
TAGAAGAAAATGTGATGGTT+TGG 0.386182 8_2:+56956359 Msa1256710:three_prime_UTR
ACCTTAGCATTCTTTGGAGT+TGG 0.386511 8_2:+56954099 Msa1256710:CDS
CAGATTTGGCTCTGTTTGCT+GGG 0.386593 8_2:-56950281 None:intergenic
GACATCACCAATGGCTTGCT+TGG 0.388055 8_2:+56949853 Msa1256710:CDS
TCATTAAATCTCCTTGTCTT+CGG 0.392639 8_2:+56949749 Msa1256710:CDS
TCGAGTGATCCTCATCAAAT+TGG 0.394138 8_2:-56954581 None:intergenic
GCACCAAATGTTGCAATGTT+TGG 0.396893 8_2:-56954555 None:intergenic
TCTGTTCCTGACAAGGGTGT+TGG 0.404195 8_2:+56954134 Msa1256710:CDS
AAAACATGTGCTATCTTTCA+AGG 0.405049 8_2:+56954264 Msa1256710:CDS
GTAAGTTCCATTGCTAATGA+TGG 0.408793 8_2:+56956575 Msa1256710:three_prime_UTR
CTGTTCCTGACAAGGGTGTT+GGG 0.412390 8_2:+56954135 Msa1256710:CDS
GGAGTTCAAATGACATCAAA+TGG 0.414438 8_2:+56954861 Msa1256710:CDS
GATGAAGGATTATGGGCTCT+TGG 0.416318 8_2:+56954699 Msa1256710:CDS
ATGAAGGATTATGGGCTCTT+GGG 0.420386 8_2:+56954700 Msa1256710:CDS
CTTGACCCAACACCCTTGTC+AGG 0.427124 8_2:-56954140 None:intergenic
CAAGCTCTCTAAGTATCTTC+TGG 0.430069 8_2:+56955895 Msa1256710:CDS
CTCTTGATGGGAGTGTTGAT+TGG 0.437188 8_2:+56950250 Msa1256710:CDS
CTTGTATGTCACAGATGAAA+AGG 0.442563 8_2:+56954890 Msa1256710:CDS
TTCAATGCTCAAACACCTGA+TGG 0.444902 8_2:+56955984 Msa1256710:CDS
CTTGCTTTGCTTAGACCAAA+AGG 0.446216 8_2:+56954429 Msa1256710:CDS
GAACATTCAAGTTTGGAAAT+GGG 0.449440 8_2:+56954480 Msa1256710:CDS
TCGAAGCTAGACATGCTTGC+TGG 0.451741 8_2:-56955675 None:intergenic
AGGCTATCAGATAGATTGAT+AGG 0.454195 8_2:-56954512 None:intergenic
AAATCTGGGAGATGGTTTGC+TGG 0.458977 8_2:+56950297 Msa1256710:CDS
AAGAAGTCAAAACAGCCAAT+AGG 0.459055 8_2:-56956169 None:intergenic
TATCTGATAGCCTTAGGAAA+TGG 0.460404 8_2:+56954522 Msa1256710:CDS
CTCACTGAACTTCAAAGAAT+GGG 0.463268 8_2:+56955786 Msa1256710:CDS
CCAAAGCTCTTCAATCCATC+AGG 0.464327 8_2:-56955999 None:intergenic
TTGCTTAGACCAAAAGGTTG+TGG 0.464656 8_2:+56954435 Msa1256710:CDS
GATTATACTTTGCAGCTACT+AGG 0.467336 8_2:-56956272 None:intergenic
TGAATAGAGGTCACTTGGAT+AGG 0.471177 8_2:+56956138 Msa1256710:CDS
GAAATTCATGGTTGTATCCA+TGG 0.472052 8_2:+56956470 Msa1256710:three_prime_UTR
TCAATCTATCTGATAGCCTT+AGG 0.473052 8_2:+56954516 Msa1256710:CDS
ATAAACTGAAAATCTTAGTC+AGG 0.474709 8_2:-56956440 None:intergenic
ATCACCAATGGCTTGCTTGG+AGG 0.475999 8_2:+56949856 Msa1256710:CDS
ACTCACTGAACTTCAAAGAA+TGG 0.482231 8_2:+56955785 Msa1256710:CDS
TTCCTTAGTGATTCTTATTG+GGG 0.487486 8_2:+56954234 Msa1256710:CDS
TTGATATCCTCCATTTCCTA+AGG 0.501268 8_2:-56954532 None:intergenic
AAGTTTCCAGGGATCCATCC+TGG 0.501655 8_2:-56956116 None:intergenic
TTGAAGTTCAGTGAGTCCCT+TGG 0.502306 8_2:-56955778 None:intergenic
GAAGTATTCACTATATATAG+AGG 0.510398 8_2:-56949710 None:intergenic
CGAGTACTTGATCCACTTGT+CGG 0.511632 8_2:+56955735 Msa1256710:CDS
TATTATGAATAAGAGAAGGA+AGG 0.513383 8_2:+56956326 Msa1256710:three_prime_UTR
CAGACCTCCAAGCAAGCCAT+TGG 0.514976 8_2:-56949860 None:intergenic
TCAACTGAAGATCACATGCC+AGG 0.517301 8_2:+56956098 Msa1256710:CDS
CACATGCCAGGATGGATCCC+TGG 0.519851 8_2:+56956110 Msa1256710:CDS
ACTTGGCAGAATCTTGAAAG+AGG 0.521999 8_2:-56954813 None:intergenic
GAACTTCAAAGAATGGGAAT+CGG 0.527583 8_2:+56955792 Msa1256710:CDS
ATAATCGCAATGGTTACAGC+TGG 0.529971 8_2:+56955828 Msa1256710:CDS
ATTATGAATAAGAGAAGGAA+GGG 0.530098 8_2:+56956327 Msa1256710:three_prime_UTR
CCCTTGTCAGGAACAGAACT+AGG 0.535224 8_2:-56954128 None:intergenic
AATGGTTACAGCTGGAATAG+TGG 0.536685 8_2:+56955836 Msa1256710:CDS
AAAGATACCATGGGTTATGT+TGG 0.537608 8_2:-56955494 None:intergenic
TGAAACTTTGACATCACCAA+TGG 0.540822 8_2:+56949844 Msa1256710:CDS
ATGCTAAGGTTGCTAGACCT+TGG 0.541001 8_2:-56954086 None:intergenic
TTCCCCAATAAGAATCACTA+AGG 0.545318 8_2:-56954236 None:intergenic
AAACTTGAATAGAGGTCACT+TGG 0.546503 8_2:+56956133 Msa1256710:CDS
CAGCAAACAGAGCCAAATCT+GGG 0.549410 8_2:+56950283 Msa1256710:CDS
GAAGGAGAGTTATTCAAAAG+TGG 0.550731 8_2:+56954602 Msa1256710:CDS
GTGGTTTCAGAATATTCAGA+TGG 0.554184 8_2:+56956223 Msa1256710:CDS
CTGAAGATCACATGCCAGGA+TGG 0.554639 8_2:+56956102 Msa1256710:CDS
TGCATGACAAGTATCTCACT+TGG 0.556372 8_2:+56956032 Msa1256710:CDS
ACCTAGTTCTGTTCCTGACA+AGG 0.556376 8_2:+56954127 Msa1256710:CDS
GACCTCTATTCAAGTTTCCA+GGG 0.557167 8_2:-56956127 None:intergenic
TGTGTGGAGAATCTTTCTGT+TGG 0.563547 8_2:-56954928 None:intergenic
AACATGTCCATCATTAGCAA+TGG 0.564737 8_2:-56956582 None:intergenic
CAGAAGAGTTAACTCTTGAT+GGG 0.565310 8_2:+56950238 Msa1256710:CDS
TGCACTTATAGGAGCTTCTG+AGG 0.569295 8_2:+56955932 Msa1256710:CDS
ACGGTAGAAGAAAATGAAGA+TGG 0.571774 8_2:-56955712 None:intergenic
CTGATAGCCTTAGGAAATGG+AGG 0.572975 8_2:+56954525 Msa1256710:CDS
CTTGAAAGAGGATTGCCACA+AGG 0.573760 8_2:-56954801 None:intergenic
GAAATGGAAAACTTGAATGT+GGG 0.577470 8_2:+56954457 Msa1256710:CDS
CAAAGCAAGGTATGTTGTAA+CGG 0.578717 8_2:-56954415 None:intergenic
CTGCTAACAATGTTAGCAAG+TGG 0.580663 8_2:+56954175 Msa1256710:CDS
TTGGATGAAAGCCGAAGACA+AGG 0.581750 8_2:-56949760 None:intergenic
TATAGACACTTTAAACCTTG+TGG 0.582951 8_2:+56954786 Msa1256710:CDS
ATCCCTGGAAACTTGAATAG+AGG 0.584308 8_2:+56956125 Msa1256710:CDS
CGTTATAGCTATAATCGCAA+TGG 0.587150 8_2:+56955818 Msa1256710:CDS
ACGTTCAATTTATACAACCA+TGG 0.588268 8_2:-56956487 None:intergenic
ACAGAGCCAAATCTGGGAGA+TGG 0.590338 8_2:+56950289 Msa1256710:CDS
GAATACAGTTAAAGAGACTC+AGG 0.593665 8_2:-56956402 None:intergenic
AACAATGTTAGCAAGTGGAC+TGG 0.597557 8_2:+56954180 Msa1256710:CDS
TCCAACTCCAAAGAATGCTA+AGG 0.597785 8_2:-56954100 None:intergenic
GGAAATGGAAAACTTGAATG+TGG 0.600088 8_2:+56954456 Msa1256710:CDS
TATATATTATGAATAAGAGA+AGG 0.610955 8_2:+56956322 Msa1256710:three_prime_UTR
CTTATATTGCATGTGCAAAG+TGG 0.617065 8_2:+56956204 Msa1256710:CDS
CCTAGTTCTGTTCCTGACAA+GGG 0.617734 8_2:+56954128 Msa1256710:CDS
GCATGACAAGTATCTCACTT+GGG 0.623076 8_2:+56956033 Msa1256710:CDS
GTAATAGGACAAAGATACCA+TGG 0.629501 8_2:-56955504 None:intergenic
AGTACTAGAAGAAAATGTGA+TGG 0.631431 8_2:+56956354 Msa1256710:three_prime_UTR
GATGGGAGTGTTGATTGGCA+TGG 0.632528 8_2:+56950255 Msa1256710:CDS
CTTACTTGAAGCCGTGTGTG+TGG 0.633341 8_2:-56954944 None:intergenic
TAATGATGAAACAGAGTGTG+TGG 0.633725 8_2:-56949732 None:intergenic
TGGTGCTGACCAATTTGATG+AGG 0.636240 8_2:+56954572 Msa1256710:CDS
AGAAAGATTCTCCACACACA+CGG 0.639314 8_2:+56954933 Msa1256710:CDS
AAGCTAGACATGCTTGCTGG+TGG 0.641340 8_2:-56955672 None:intergenic
GAACAAGGAAGACCCAAGAG+AGG 0.644148 8_2:-56956537 None:intergenic
TAATAGGACAAAGATACCAT+GGG 0.644527 8_2:-56955503 None:intergenic
AAGGAGGCCAACATAACCCA+TGG 0.645622 8_2:+56955487 Msa1256710:CDS
TTGCTTGGAGGTCTGCAAAG+AGG 0.646487 8_2:+56949868 Msa1256710:CDS
ATTTGATGAGGATCACTCGA+AGG 0.667565 8_2:+56954584 Msa1256710:CDS
AGACTTAAGTATGCAAAACA+AGG 0.668964 8_2:+56955867 Msa1256710:CDS
TGTTTGAGAAAAGTGAACCA+AGG 0.671848 8_2:-56954656 None:intergenic
AAATGAAGATGGCTACGCTG+AGG 0.695724 8_2:-56955701 None:intergenic
TTTAATCTACCAGTGAACCA+AGG 0.698549 8_2:+56954069 Msa1256710:intron
AAATGGAAAACTTGAATGTG+GGG 0.708899 8_2:+56954458 Msa1256710:CDS
CAAGTGGATCAAGTACTCGA+CGG 0.715679 8_2:-56955731 None:intergenic
GCTCCTATAAGTGCATACTG+AGG 0.719671 8_2:-56955924 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTATTTTT+AGG + chr8_2:56952131-56952150 Msa1256710:intron 0.0%
!!! TTTTTTATTTTTTATTTTTA+GGG + chr8_2:56952132-56952151 Msa1256710:intron 0.0%
!!! TTTATTTTATTACATCAAAT+TGG + chr8_2:56950393-56950412 Msa1256710:intron 10.0%
!! AATATGGTATTATAAATTAA+GGG - chr8_2:56950708-56950727 None:intergenic 10.0%
!! AAAAAATAAAAACTATAATG+GGG - chr8_2:56952116-56952135 None:intergenic 10.0%
!!! AAATTCAAACATTTTAATTT+AGG - chr8_2:56953769-56953788 None:intergenic 10.0%
!! AATATTTAATTCATTAGAAA+GGG - chr8_2:56953800-56953819 None:intergenic 10.0%
!! AAATATTTAATTCATTAGAA+AGG - chr8_2:56953801-56953820 None:intergenic 10.0%
!!! AACATTATATTTTAGAAACA+AGG - chr8_2:56949928-56949947 None:intergenic 15.0%
!! CACATATCTAAATATAAATT+TGG + chr8_2:56950443-56950462 Msa1256710:intron 15.0%
!!! CATATATATGATTTAAGATA+GGG - chr8_2:56950684-56950703 None:intergenic 15.0%
!! GAATATGGTATTATAAATTA+AGG - chr8_2:56950709-56950728 None:intergenic 15.0%
!!! AAATCGTATTTTATATTATG+TGG + chr8_2:56950777-56950796 Msa1256710:intron 15.0%
!!! ATTTTATATTATGTGGATTA+AGG + chr8_2:56950784-56950803 Msa1256710:intron 15.0%
!! TGAATAAACATATATGATTA+CGG - chr8_2:56950979-56950998 None:intergenic 15.0%
!!! TTGTTTTTTGTTACTTTTTT+TGG - chr8_2:56951024-56951043 None:intergenic 15.0%
!!! TTCTTAAAATTTTCTAAGAT+GGG - chr8_2:56951302-56951321 None:intergenic 15.0%
!!! TTTCTTAAAATTTTCTAAGA+TGG - chr8_2:56951303-56951322 None:intergenic 15.0%
!! TTACTAATGTGTTTAATTAT+GGG - chr8_2:56952514-56952533 None:intergenic 15.0%
!! TCAATTCAAACATTAAAAAT+AGG - chr8_2:56952783-56952802 None:intergenic 15.0%
!! AAAAAAAAAATAATGTATGG+AGG + chr8_2:56953942-56953961 Msa1256710:intron 15.0%
!! TAGTAAGAAATTAATTAAAG+TGG - chr8_2:56954332-56954351 None:intergenic 15.0%
!!! TAATTTGTTCATTTATGTTA+TGG + chr8_2:56954363-56954382 Msa1256710:intron 15.0%
!! TATATATTATGAATAAGAGA+AGG + chr8_2:56956322-56956341 Msa1256710:three_prime_UTR 15.0%
!! ATATGGAAAAGTTGTATTTA+TGG - chr8_2:56949897-56949916 None:intergenic 20.0%
!! GAAACAAGGAATAAATAATA+TGG - chr8_2:56949914-56949933 None:intergenic 20.0%
!!! TGTGTAGTTAATTTTTCAAA+AGG - chr8_2:56950603-56950622 None:intergenic 20.0%
!!! CCATATATATGATTTAAGAT+AGG - chr8_2:56950685-56950704 None:intergenic 20.0%
!! CCTATCTTAAATCATATATA+TGG + chr8_2:56950682-56950701 Msa1256710:intron 20.0%
!!! TACGATTTTATTAATACACA+GGG - chr8_2:56950765-56950784 None:intergenic 20.0%
!!! ATACGATTTTATTAATACAC+AGG - chr8_2:56950766-56950785 None:intergenic 20.0%
!! ATATCAAATAGATAGCTTAT+TGG - chr8_2:56950918-56950937 None:intergenic 20.0%
!! GAATAATTTATTTCCATGTT+TGG + chr8_2:56951445-56951464 Msa1256710:intron 20.0%
!!! GGAATTGTATTTTAAGAAAA+TGG - chr8_2:56951974-56951993 None:intergenic 20.0%
!! TACACTTTCATATATACTTA+TGG + chr8_2:56952427-56952446 Msa1256710:intron 20.0%
!! GTTACTAATGTGTTTAATTA+TGG - chr8_2:56952515-56952534 None:intergenic 20.0%
!! TAAATAGTAGTGACAAAATT+TGG - chr8_2:56952565-56952584 None:intergenic 20.0%
!! TTTGTCCTAAATAAAATGTT+AGG + chr8_2:56952729-56952748 Msa1256710:intron 20.0%
!!! TCATACCTAACATTTTATTT+AGG - chr8_2:56952737-56952756 None:intergenic 20.0%
!!! CACAATCTTTTAGATTTTTT+TGG + chr8_2:56952986-56953005 Msa1256710:intron 20.0%
!!! AATCTTTTAGATTTTTTTGG+TGG + chr8_2:56952989-56953008 Msa1256710:intron 20.0%
!! AGGAAAAATATTTCTTGATT+TGG - chr8_2:56953299-56953318 None:intergenic 20.0%
!!! ATCAAGAAATATTTTTCCTT+TGG + chr8_2:56953300-56953319 Msa1256710:intron 20.0%
!!! AAATAAATTTAGGTTAAGAG+AGG + chr8_2:56953567-56953586 Msa1256710:intron 20.0%
!!! AATAAATTTAGGTTAAGAGA+GGG + chr8_2:56953568-56953587 Msa1256710:intron 20.0%
!!! TTAGATCTTTTGAACAAATA+TGG - chr8_2:56953651-56953670 None:intergenic 20.0%
!! TTCTATCACATATTATTTGT+TGG - chr8_2:56953705-56953724 None:intergenic 20.0%
!!! TCAAACATTTTAATTTAGGA+TGG - chr8_2:56953765-56953784 None:intergenic 20.0%
!! TCATGAAAAAAAAAGTTCAT+AGG + chr8_2:56953876-56953895 Msa1256710:intron 20.0%
!!! ATTTTTTAGCTACTTTTACT+TGG + chr8_2:56954626-56954645 Msa1256710:CDS 20.0%
!!! TTTAAAGTGTCTATATTTTG+GGG - chr8_2:56954781-56954800 None:intergenic 20.0%
!!! GTTTAAAGTGTCTATATTTT+GGG - chr8_2:56954782-56954801 None:intergenic 20.0%
!! GTAATTAAACAATAGAACTT+CGG + chr8_2:56955287-56955306 Msa1256710:intron 20.0%
!! ATATAAGTCATAATTGCATT+TGG + chr8_2:56955358-56955377 Msa1256710:intron 20.0%
!! ATAGATGATAAATGGAAAAT+TGG - chr8_2:56955410-56955429 None:intergenic 20.0%
!! AAGTATAATCATTTCCAATA+TGG + chr8_2:56956285-56956304 Msa1256710:exon 20.0%
!!! TTTATGTACTTTGAAATTCA+TGG + chr8_2:56956458-56956477 Msa1256710:three_prime_UTR 20.0%
!! AACTTACAAAAAATGAAAGA+AGG - chr8_2:56956562-56956581 None:intergenic 20.0%
!! GAAGTATTCACTATATATAG+AGG - chr8_2:56949713-56949732 None:intergenic 25.0%
! TCAAAGTTTCAAAGACAAAA+AGG - chr8_2:56949835-56949854 None:intergenic 25.0%
!! GGACTTTAATTTAGTAATGT+TGG - chr8_2:56949951-56949970 None:intergenic 25.0%
!! GGATGGATATATATGTATTT+TGG - chr8_2:56949972-56949991 None:intergenic 25.0%
! TACATATATATCCATCCTAT+TGG + chr8_2:56949975-56949994 Msa1256710:intron 25.0%
!!! AATCAAACAGAGTTTTGTTT+TGG - chr8_2:56950007-56950026 None:intergenic 25.0%
! TTTCAACATACACATCAAAA+TGG - chr8_2:56950188-56950207 None:intergenic 25.0%
!! TATGTTGAAAATTTTGTGCA+GGG + chr8_2:56950198-56950217 Msa1256710:intron 25.0%
! TAACGTAAAACTTCTTTGTT+AGG - chr8_2:56950564-56950583 None:intergenic 25.0%
! TGGACTCATAAAAATGAATA+TGG - chr8_2:56950724-56950743 None:intergenic 25.0%
!!! ACGTATAATTTGATGATGAT+AGG + chr8_2:56951092-56951111 Msa1256710:intron 25.0%
! ATTGCATATTCAATAATAGC+TGG - chr8_2:56951172-56951191 None:intergenic 25.0%
! GAATATGCAATGCAATTAAT+CGG + chr8_2:56951181-56951200 Msa1256710:intron 25.0%
! ACAACTTTAATTAACACTAC+AGG + chr8_2:56951326-56951345 Msa1256710:intron 25.0%
! GGAATAAAAATAGAGTAACA+TGG - chr8_2:56951529-56951548 None:intergenic 25.0%
!! ATTTTTATTCCCAGCATAAA+AGG + chr8_2:56951538-56951557 Msa1256710:intron 25.0%
! ACTGAAGAAATAAAAAAACG+TGG - chr8_2:56951670-56951689 None:intergenic 25.0%
!!! TCCATTGAATGAATTTTGAT+AGG + chr8_2:56951734-56951753 Msa1256710:intron 25.0%
!!! CCATTGAATGAATTTTGATA+GGG + chr8_2:56951735-56951754 Msa1256710:intron 25.0%
!! ACGTTTAGTCAATTTTACTA+AGG + chr8_2:56951931-56951950 Msa1256710:intron 25.0%
!! CGTTTAGTCAATTTTACTAA+GGG + chr8_2:56951932-56951951 Msa1256710:intron 25.0%
! TTTCTTAAAATACAATTCCC+AGG + chr8_2:56951975-56951994 Msa1256710:intron 25.0%
!!! TTTTTAGGGTTTTGATTTGT+TGG + chr8_2:56952146-56952165 Msa1256710:intron 25.0%
! AGACAGAAAATAGGAAAAAA+AGG + chr8_2:56952271-56952290 Msa1256710:intron 25.0%
! TACCATATTCTTAACCTTAT+TGG - chr8_2:56952680-56952699 None:intergenic 25.0%
! AATAAGGTTAAGAATATGGT+AGG + chr8_2:56952679-56952698 Msa1256710:intron 25.0%
! GTATAAAATATGCAAGGTTT+CGG - chr8_2:56953031-56953050 None:intergenic 25.0%
! GACAATGTATAAAATATGCA+AGG - chr8_2:56953037-56953056 None:intergenic 25.0%
!!! AGGACTTGTTTTTTTGTTTT+AGG - chr8_2:56953357-56953376 None:intergenic 25.0%
! AAAAACAAGTCCTATTAGTT+AGG + chr8_2:56953364-56953383 Msa1256710:intron 25.0%
! TGAACAAATATGGTGTAATT+TGG - chr8_2:56953641-56953660 None:intergenic 25.0%
! TTTCCTTAGTGATTCTTATT+GGG + chr8_2:56954233-56954252 Msa1256710:CDS 25.0%
! ATGTTATGGTTTGATATAAC+AGG + chr8_2:56954377-56954396 Msa1256710:intron 25.0%
! TGTTATGGTTTGATATAACA+GGG + chr8_2:56954378-56954397 Msa1256710:intron 25.0%
!! ACTTTTCTCAAACACTATTT+TGG + chr8_2:56954665-56954684 Msa1256710:CDS 25.0%
!! CTTTTCTCAAACACTATTTT+GGG + chr8_2:56954666-56954685 Msa1256710:CDS 25.0%
!!! ATTTTGAAGATGAAGGATTA+TGG + chr8_2:56954691-56954710 Msa1256710:CDS 25.0%
!!! TTTTGAAGATGAAGGATTAT+GGG + chr8_2:56954692-56954711 Msa1256710:CDS 25.0%
!!! GGTTTAAAGTGTCTATATTT+TGG - chr8_2:56954783-56954802 None:intergenic 25.0%
! TGTAAACATCAATTCGTTAT+TGG - chr8_2:56954984-56955003 None:intergenic 25.0%
! TTGTTTAATTACTCTTTAGC+AGG - chr8_2:56955279-56955298 None:intergenic 25.0%
! TATAACTTCAAGAGATTTAG+AGG + chr8_2:56955458-56955477 Msa1256710:CDS 25.0%
!!! TATTTTGAAACTGGAAATAG+TGG - chr8_2:56955652-56955671 None:intergenic 25.0%
! TATTATGAATAAGAGAAGGA+AGG + chr8_2:56956326-56956345 Msa1256710:three_prime_UTR 25.0%
! ATTATGAATAAGAGAAGGAA+GGG + chr8_2:56956327-56956346 Msa1256710:three_prime_UTR 25.0%
! ATAAACTGAAAATCTTAGTC+AGG - chr8_2:56956443-56956462 None:intergenic 25.0%
!!! AAGAGACAATGATAGTTTTA+GGG + chr8_2:56956514-56956533 Msa1256710:three_prime_UTR 25.0%
! AAAAAATGAAAGAAGGAACA+AGG - chr8_2:56956555-56956574 None:intergenic 25.0%
TCATTAAATCTCCTTGTCTT+CGG + chr8_2:56949749-56949768 Msa1256710:CDS 30.0%
! GTATGTTGAAAATTTTGTGC+AGG + chr8_2:56950197-56950216 Msa1256710:intron 30.0%
! ATGTTGAAAATTTTGTGCAG+GGG + chr8_2:56950199-56950218 Msa1256710:intron 30.0%
!!! TGATCATAGTTTTGTGATCA+CGG + chr8_2:56950492-56950511 Msa1256710:intron 30.0%
! GTGGATTAAGGTTTAAAGTT+AGG + chr8_2:56950796-56950815 Msa1256710:intron 30.0%
!! TGTTACTTAGAGGTCAATTT+TGG + chr8_2:56950829-56950848 Msa1256710:intron 30.0%
ATAGGATTATAAAAGAGTCG+TGG + chr8_2:56951110-56951129 Msa1256710:intron 30.0%
TATTCAATAATAGCTGGACA+AGG - chr8_2:56951166-56951185 None:intergenic 30.0%
ACATTTCACAATGAGCTATT+AGG + chr8_2:56951373-56951392 Msa1256710:intron 30.0%
CATTTCACAATGAGCTATTA+GGG + chr8_2:56951374-56951393 Msa1256710:intron 30.0%
ATTTCACAATGAGCTATTAG+GGG + chr8_2:56951375-56951394 Msa1256710:intron 30.0%
CTTCTACTAATTAAATTCCC+AGG + chr8_2:56951410-56951429 Msa1256710:intron 30.0%
ATGGTTGAAAAAAAGTTACC+GGG - chr8_2:56951510-56951529 None:intergenic 30.0%
CATGGTTGAAAAAAAGTTAC+CGG - chr8_2:56951511-56951530 None:intergenic 30.0%
AAACAAATTGTGTAAACTGC+CGG - chr8_2:56951581-56951600 None:intergenic 30.0%
CCCTATCAAAATTCATTCAA+TGG - chr8_2:56951738-56951757 None:intergenic 30.0%
!! TTGAATGAATTTTGATAGGG+CGG + chr8_2:56951738-56951757 Msa1256710:intron 30.0%
!! GAAAGTTTGACAAAAGTGTT+TGG - chr8_2:56952016-56952035 None:intergenic 30.0%
!! TTAGTGGACATTTTATTCCT+AGG - chr8_2:56952038-56952057 None:intergenic 30.0%
AATGTCCACTAATATATTCC+TGG + chr8_2:56952046-56952065 Msa1256710:intron 30.0%
ATGTCCACTAATATATTCCT+GGG + chr8_2:56952047-56952066 Msa1256710:intron 30.0%
! TGTTCTATCTAAAACCGAAA+CGG - chr8_2:56952187-56952206 None:intergenic 30.0%
! TCTTATTTGCAATTACGTGT+CGG - chr8_2:56952360-56952379 None:intergenic 30.0%
AATAAGATTAACCATGACGT+AGG + chr8_2:56952373-56952392 Msa1256710:intron 30.0%
ATAAACCACAATCTCATGTA+AGG + chr8_2:56952641-56952660 Msa1256710:intron 30.0%
CACCAATAAGGTTAAGAATA+TGG + chr8_2:56952675-56952694 Msa1256710:intron 30.0%
!!! CTTTTAGATTTTTTTGGTGG+TGG + chr8_2:56952992-56953011 Msa1256710:intron 30.0%
GTATTTACAATTGGTCGATA+CGG - chr8_2:56953326-56953345 None:intergenic 30.0%
AACTAAGATATCAAAGGTGA+AGG + chr8_2:56953392-56953411 Msa1256710:intron 30.0%
CTTTCCTTAGTGATTCTTAT+TGG + chr8_2:56954232-56954251 Msa1256710:CDS 30.0%
TTCCTTAGTGATTCTTATTG+GGG + chr8_2:56954234-56954253 Msa1256710:CDS 30.0%
AAAACATGTGCTATCTTTCA+AGG + chr8_2:56954264-56954283 Msa1256710:CDS 30.0%
GAAATGGAAAACTTGAATGT+GGG + chr8_2:56954457-56954476 Msa1256710:CDS 30.0%
AAATGGAAAACTTGAATGTG+GGG + chr8_2:56954458-56954477 Msa1256710:CDS 30.0%
! GAACATTCAAGTTTGGAAAT+GGG + chr8_2:56954480-56954499 Msa1256710:CDS 30.0%
TATAGACACTTTAAACCTTG+TGG + chr8_2:56954786-56954805 Msa1256710:CDS 30.0%
CCTGCAATATAGATGATAAA+TGG - chr8_2:56955418-56955437 None:intergenic 30.0%
CCATTTATCATCTATATTGC+AGG + chr8_2:56955415-56955434 Msa1256710:intron 30.0%
! TCATCTATATTGCAGGTTTT+TGG + chr8_2:56955422-56955441 Msa1256710:intron 30.0%
!! TATATTGCAGGTTTTTGGAT+AGG + chr8_2:56955427-56955446 Msa1256710:intron 30.0%
!! ATATTGCAGGTTTTTGGATA+GGG + chr8_2:56955428-56955447 Msa1256710:intron 30.0%
TAATAGGACAAAGATACCAT+GGG - chr8_2:56955506-56955525 None:intergenic 30.0%
ACTTCTTCAACTTGAGTAAT+AGG - chr8_2:56955522-56955541 None:intergenic 30.0%
TACTAAGACTTCTTCCAATT+TGG + chr8_2:56955550-56955569 Msa1256710:CDS 30.0%
ATTATTGTGCAAAGCCAAAT+TGG - chr8_2:56955567-56955586 None:intergenic 30.0%
ACTCAAAAAAACAAGTTCCA+AGG + chr8_2:56955761-56955780 Msa1256710:CDS 30.0%
CTCAAAAAAACAAGTTCCAA+GGG + chr8_2:56955762-56955781 Msa1256710:CDS 30.0%
AGACTTAAGTATGCAAAACA+AGG + chr8_2:56955867-56955886 Msa1256710:CDS 30.0%
!! TCTGAGGTTTTTATGTATGT+AGG + chr8_2:56955948-56955967 Msa1256710:CDS 30.0%
ATGTTAACACTTCTCCATAT+TGG - chr8_2:56956302-56956321 None:intergenic 30.0%
AGTACTAGAAGAAAATGTGA+TGG + chr8_2:56956354-56956373 Msa1256710:three_prime_UTR 30.0%
TAGAAGAAAATGTGATGGTT+TGG + chr8_2:56956359-56956378 Msa1256710:three_prime_UTR 30.0%
TTAAAGAGACTCAGGTAAAA+AGG - chr8_2:56956397-56956416 None:intergenic 30.0%
ACGTTCAATTTATACAACCA+TGG - chr8_2:56956490-56956509 None:intergenic 30.0%
! GAAGAGACAATGATAGTTTT+AGG + chr8_2:56956513-56956532 Msa1256710:three_prime_UTR 30.0%
TAATGATGAAACAGAGTGTG+TGG - chr8_2:56949735-56949754 None:intergenic 35.0%
! GAGGAAGATTGTTGTTGATT+TGG - chr8_2:56949782-56949801 None:intergenic 35.0%
TGAGAAAAATGATGAAGCAG+AGG - chr8_2:56949801-56949820 None:intergenic 35.0%
TGAAACTTTGACATCACCAA+TGG + chr8_2:56949844-56949863 Msa1256710:CDS 35.0%
!!! AACAGAGTTTTGTTTTGGTG+AGG - chr8_2:56950002-56950021 None:intergenic 35.0%
CGTGAGTGATCAACATAATT+TGG - chr8_2:56950043-56950062 None:intergenic 35.0%
!! AGTTTTTGAGCATGCACTTA+CGG + chr8_2:56950073-56950092 Msa1256710:intron 35.0%
ACAGAAGAGTTAACTCTTGA+TGG + chr8_2:56950237-56950256 Msa1256710:CDS 35.0%
CAGAAGAGTTAACTCTTGAT+GGG + chr8_2:56950238-56950257 Msa1256710:CDS 35.0%
! CATTTTTATGAGTCCATGTG+TGG + chr8_2:56950728-56950747 Msa1256710:intron 35.0%
!! AGATGAATTTTGAGTGTGCA+CGG + chr8_2:56951054-56951073 Msa1256710:intron 35.0%
CAAGGTTCTTGAATCTTCTA+CGG - chr8_2:56951148-56951167 None:intergenic 35.0%
TATGCAATGCAATTAATCGG+TGG + chr8_2:56951184-56951203 Msa1256710:intron 35.0%
TTTCACAATGAGCTATTAGG+GGG + chr8_2:56951376-56951395 Msa1256710:intron 35.0%
AAATTCCCAGGAATCTAAGA+TGG + chr8_2:56951422-56951441 Msa1256710:intron 35.0%
! AATTCCCAGGAATCTAAGAT+GGG + chr8_2:56951423-56951442 Msa1256710:intron 35.0%
TATTCCCATCTTAGATTCCT+GGG - chr8_2:56951430-56951449 None:intergenic 35.0%
TTATTCCCATCTTAGATTCC+TGG - chr8_2:56951431-56951450 None:intergenic 35.0%
TCCAAGGAATAAAACATTCC+CGG + chr8_2:56951489-56951508 Msa1256710:intron 35.0%
TTATTCCCAGCATAAAAGGA+TGG + chr8_2:56951542-56951561 Msa1256710:intron 35.0%
TATTCCCAGCATAAAAGGAT+GGG + chr8_2:56951543-56951562 Msa1256710:intron 35.0%
AACAAATTGTGTAAACTGCC+GGG - chr8_2:56951580-56951599 None:intergenic 35.0%
TGTGGTTGGCAGTTATTTAA+GGG - chr8_2:56951622-56951641 None:intergenic 35.0%
CAATAAAGCTCATGTGCTTT+CGG + chr8_2:56951796-56951815 Msa1256710:intron 35.0%
!! GGTTGTTGATTTGAATTCCT+GGG - chr8_2:56951995-56952014 None:intergenic 35.0%
!! TGGTTGTTGATTTGAATTCC+TGG - chr8_2:56951996-56952015 None:intergenic 35.0%
! CACTTTTGTCAAACTTTCCT+AGG + chr8_2:56952018-56952037 Msa1256710:intron 35.0%
CTTTCCCAGGAATATATTAG+TGG - chr8_2:56952054-56952073 None:intergenic 35.0%
CTGAATCCTTATAAAACGAC+AGG + chr8_2:56952248-56952267 Msa1256710:intron 35.0%
GGTTAAGAATATGGTAGGTT+AGG + chr8_2:56952684-56952703 Msa1256710:intron 35.0%
GGTTAGGATAGACTTTAGTA+AGG + chr8_2:56952700-56952719 Msa1256710:intron 35.0%
!! GTCTCGAGAGTATTTACAAT+TGG - chr8_2:56953335-56953354 None:intergenic 35.0%
!! TAGTTCTGGACCTAACTAAT+AGG - chr8_2:56953377-56953396 None:intergenic 35.0%
GTCCAGAACTAAGATATCAA+AGG + chr8_2:56953386-56953405 Msa1256710:intron 35.0%
CACCTTTGATATCTTAGTTC+TGG - chr8_2:56953391-56953410 None:intergenic 35.0%
AAAGGTGAAGGACAGTTTAA+AGG + chr8_2:56953404-56953423 Msa1256710:intron 35.0%
GACGTATCAGAGTTATACAT+AGG + chr8_2:56953438-56953457 Msa1256710:intron 35.0%
AAAAAGTTCATAGGTGTTCG+TGG + chr8_2:56953885-56953904 Msa1256710:intron 35.0%
AAAAGTTCATAGGTGTTCGT+GGG + chr8_2:56953886-56953905 Msa1256710:intron 35.0%
TTTAATCTACCAGTGAACCA+AGG + chr8_2:56954069-56954088 Msa1256710:intron 35.0%
GTTTACATCTTCTCTCTTGT+TGG + chr8_2:56954207-56954226 Msa1256710:CDS 35.0%
TTCCCCAATAAGAATCACTA+AGG - chr8_2:56954239-56954258 None:intergenic 35.0%
CAAAGCAAGGTATGTTGTAA+CGG - chr8_2:56954418-56954437 None:intergenic 35.0%
! TTTCCATTTCCACAACCTTT+TGG - chr8_2:56954447-56954466 None:intergenic 35.0%
GGAAATGGAAAACTTGAATG+TGG + chr8_2:56954456-56954475 Msa1256710:CDS 35.0%
! GGAACATTCAAGTTTGGAAA+TGG + chr8_2:56954479-56954498 Msa1256710:CDS 35.0%
AGGCTATCAGATAGATTGAT+AGG - chr8_2:56954515-56954534 None:intergenic 35.0%
TCAATCTATCTGATAGCCTT+AGG + chr8_2:56954516-56954535 Msa1256710:CDS 35.0%
! TATCTGATAGCCTTAGGAAA+TGG + chr8_2:56954522-56954541 Msa1256710:CDS 35.0%
TTGATATCCTCCATTTCCTA+AGG - chr8_2:56954535-56954554 None:intergenic 35.0%
CAACCAAACATTGCAACATT+TGG + chr8_2:56954552-56954571 Msa1256710:CDS 35.0%
GAAGGAGAGTTATTCAAAAG+TGG + chr8_2:56954602-56954621 Msa1256710:CDS 35.0%
!! TTTTACTTGGCATTGAACCT+TGG + chr8_2:56954639-56954658 Msa1256710:CDS 35.0%
TGTTTGAGAAAAGTGAACCA+AGG - chr8_2:56954659-56954678 None:intergenic 35.0%
!! TTGGGCTATTTTGAAGATGA+AGG + chr8_2:56954684-56954703 Msa1256710:CDS 35.0%
! AAAAAGTACAAGGGCCAAAA+AGG - chr8_2:56954748-56954767 None:intergenic 35.0%
! GCCAACAAGAAAAAGTACAA+GGG - chr8_2:56954757-56954776 None:intergenic 35.0%
! TGCCAACAAGAAAAAGTACA+AGG - chr8_2:56954758-56954777 None:intergenic 35.0%
TTGAAGCAGCAAAAAACACT+TGG - chr8_2:56954833-56954852 None:intergenic 35.0%
!!! AAGTGTTTTTTGCTGCTTCA+AGG + chr8_2:56954832-56954851 Msa1256710:CDS 35.0%
! TTTGCTGCTTCAAGGAAATT+AGG + chr8_2:56954840-56954859 Msa1256710:CDS 35.0%
GGAGTTCAAATGACATCAAA+TGG + chr8_2:56954861-56954880 Msa1256710:CDS 35.0%
CTTGTATGTCACAGATGAAA+AGG + chr8_2:56954890-56954909 Msa1256710:CDS 35.0%
GTTTACACTTCATAACTCTG+AGG + chr8_2:56954997-56955016 Msa1256710:intron 35.0%
! CGACATAATGGTTTTTGATG+TGG - chr8_2:56955220-56955239 None:intergenic 35.0%
CATCAAAAACCATTATGTCG+TGG + chr8_2:56955220-56955239 Msa1256710:intron 35.0%
AGAGATTTAGAGGTCCAAAA+AGG + chr8_2:56955468-56955487 Msa1256710:CDS 35.0%
! AAAGATACCATGGGTTATGT+TGG - chr8_2:56955497-56955516 None:intergenic 35.0%
GTAATAGGACAAAGATACCA+TGG - chr8_2:56955507-56955526 None:intergenic 35.0%
! CTCAGTAGTTTTCACTCAAA+TGG + chr8_2:56955590-56955609 Msa1256710:CDS 35.0%
! TCAAATGGCTTCTCTTTTTG+TGG + chr8_2:56955605-56955624 Msa1256710:CDS 35.0%
! GGAAATAGTGGTTTTCATTG+CGG - chr8_2:56955640-56955659 None:intergenic 35.0%
ACGGTAGAAGAAAATGAAGA+TGG - chr8_2:56955715-56955734 None:intergenic 35.0%
!!! TTTTTGAGTTTTCCGACAAG+TGG - chr8_2:56955750-56955769 None:intergenic 35.0%
ACTCACTGAACTTCAAAGAA+TGG + chr8_2:56955785-56955804 Msa1256710:CDS 35.0%
CTCACTGAACTTCAAAGAAT+GGG + chr8_2:56955786-56955805 Msa1256710:CDS 35.0%
GAACTTCAAAGAATGGGAAT+CGG + chr8_2:56955792-56955811 Msa1256710:CDS 35.0%
CGTTATAGCTATAATCGCAA+TGG + chr8_2:56955818-56955837 Msa1256710:CDS 35.0%
ATTCCTCAGTATGCACTTAT+AGG + chr8_2:56955921-56955940 Msa1256710:CDS 35.0%
AAACTTGAATAGAGGTCACT+TGG + chr8_2:56956133-56956152 Msa1256710:CDS 35.0%
! GGATAGGTTTTTCTTCCTAT+TGG + chr8_2:56956154-56956173 Msa1256710:CDS 35.0%
AAGAAGTCAAAACAGCCAAT+AGG - chr8_2:56956172-56956191 None:intergenic 35.0%
CTTATATTGCATGTGCAAAG+TGG + chr8_2:56956204-56956223 Msa1256710:CDS 35.0%
GTGGTTTCAGAATATTCAGA+TGG + chr8_2:56956223-56956242 Msa1256710:CDS 35.0%
GATTATACTTTGCAGCTACT+AGG - chr8_2:56956275-56956294 None:intergenic 35.0%
GAATACAGTTAAAGAGACTC+AGG - chr8_2:56956405-56956424 None:intergenic 35.0%
GAAATTCATGGTTGTATCCA+TGG + chr8_2:56956470-56956489 Msa1256710:three_prime_UTR 35.0%
GTAAGTTCCATTGCTAATGA+TGG + chr8_2:56956575-56956594 Msa1256710:three_prime_UTR 35.0%
AACATGTCCATCATTAGCAA+TGG - chr8_2:56956585-56956604 None:intergenic 35.0%
!!! TTGTTTTGGTGAGGTCCAAT+AGG - chr8_2:56949993-56950012 None:intergenic 40.0%
!! TCGCAACTAGTGTTACTTAG+AGG + chr8_2:56950819-56950838 Msa1256710:intron 40.0%
!! GATGAATTTTGAGTGTGCAC+GGG + chr8_2:56951055-56951074 Msa1256710:intron 40.0%
!! ATGAATTTTGAGTGTGCACG+GGG + chr8_2:56951056-56951075 Msa1256710:intron 40.0%
ATGCACGCAAAAAAGTTCCA+AGG + chr8_2:56951473-56951492 Msa1256710:intron 40.0%
!! ACCGGGAATGTTTTATTCCT+TGG - chr8_2:56951493-56951512 None:intergenic 40.0%
! CATTCCCATCCTTTTATGCT+GGG - chr8_2:56951550-56951569 None:intergenic 40.0%
! TCATTCCCATCCTTTTATGC+TGG - chr8_2:56951551-56951570 None:intergenic 40.0%
GGATGGGAATGATTTATTCC+CGG + chr8_2:56951559-56951578 Msa1256710:intron 40.0%
GTGTGGTTGGCAGTTATTTA+AGG - chr8_2:56951623-56951642 None:intergenic 40.0%
CATTCAATGGAAGCAAGCAA+TGG - chr8_2:56951725-56951744 None:intergenic 40.0%
ATTCCTGGGAAAGTTAATCC+TGG + chr8_2:56952061-56952080 Msa1256710:intron 40.0%
TTCCTGGGAAAGTTAATCCT+GGG + chr8_2:56952062-56952081 Msa1256710:intron 40.0%
GGGAATCAAAATGTATTCCC+AGG - chr8_2:56952082-56952101 None:intergenic 40.0%
! ATAATGGGGCGTTTGTTTCA+GGG - chr8_2:56952102-56952121 None:intergenic 40.0%
! TATAATGGGGCGTTTGTTTC+AGG - chr8_2:56952103-56952122 None:intergenic 40.0%
TGATTCTTACTCGACCGTTT+CGG + chr8_2:56952170-56952189 Msa1256710:intron 40.0%
!!! CTGTCTCCTGTCGTTTTATA+AGG - chr8_2:56952257-56952276 None:intergenic 40.0%
AACGACAGGAGACAGAAAAT+AGG + chr8_2:56952262-56952281 Msa1256710:intron 40.0%
CATGTATGCATCATAACACG+TGG - chr8_2:56952405-56952424 None:intergenic 40.0%
TACTTATGGACATGAGTGCA+AGG + chr8_2:56952441-56952460 Msa1256710:intron 40.0%
!! ACTAGCCTTACATGAGATTG+TGG - chr8_2:56952649-56952668 None:intergenic 40.0%
ATCTCATGTAAGGCTAGTGA+AGG + chr8_2:56952651-56952670 Msa1256710:intron 40.0%
CTAACAAATCACCACTTGAG+TGG - chr8_2:56952903-56952922 None:intergenic 40.0%
!!! GATTTTTTTGGTGGTGGTCA+TGG + chr8_2:56952998-56953017 Msa1256710:intron 40.0%
! TTTTCTTTGCACACGCGAAA+AGG - chr8_2:56953478-56953497 None:intergenic 40.0%
CTAGCAACCTTAGCATTCTT+TGG + chr8_2:56954093-56954112 Msa1256710:CDS 40.0%
!! ACCTTAGCATTCTTTGGAGT+TGG + chr8_2:56954099-56954118 Msa1256710:CDS 40.0%
TCCAACTCCAAAGAATGCTA+AGG - chr8_2:56954103-56954122 None:intergenic 40.0%
CTGCTAACAATGTTAGCAAG+TGG + chr8_2:56954175-56954194 Msa1256710:CDS 40.0%
AACAATGTTAGCAAGTGGAC+TGG + chr8_2:56954180-56954199 Msa1256710:CDS 40.0%
! CTTTTGGTCTAAGCAAAGCA+AGG - chr8_2:56954431-56954450 None:intergenic 40.0%
CTTGCTTTGCTTAGACCAAA+AGG + chr8_2:56954429-56954448 Msa1256710:CDS 40.0%
TTGCTTAGACCAAAAGGTTG+TGG + chr8_2:56954435-56954454 Msa1256710:CDS 40.0%
AGACCAAAAGGTTGTGGAAA+TGG + chr8_2:56954441-56954460 Msa1256710:CDS 40.0%
! ATGTGGGGAACATTCAAGTT+TGG + chr8_2:56954473-56954492 Msa1256710:CDS 40.0%
GCACCAAATGTTGCAATGTT+TGG - chr8_2:56954558-56954577 None:intergenic 40.0%
TCGAGTGATCCTCATCAAAT+TGG - chr8_2:56954584-56954603 None:intergenic 40.0%
ATTTGATGAGGATCACTCGA+AGG + chr8_2:56954584-56954603 Msa1256710:CDS 40.0%
ATGAAGGATTATGGGCTCTT+GGG + chr8_2:56954700-56954719 Msa1256710:CDS 40.0%
! ATTATGGGCTCTTGGGTTTT+GGG + chr8_2:56954707-56954726 Msa1256710:CDS 40.0%
!!! GCCCTTGTACTTTTTCTTGT+TGG + chr8_2:56954753-56954772 Msa1256710:CDS 40.0%
ACTTGGCAGAATCTTGAAAG+AGG - chr8_2:56954816-56954835 None:intergenic 40.0%
TGTGTGGAGAATCTTTCTGT+TGG - chr8_2:56954931-56954950 None:intergenic 40.0%
AGAAAGATTCTCCACACACA+CGG + chr8_2:56954933-56954952 Msa1256710:CDS 40.0%
CCACATTTGAAAGGGACTTT+CGG - chr8_2:56955170-56955189 None:intergenic 40.0%
CAATCTTGACCACGACATAA+TGG - chr8_2:56955232-56955251 None:intergenic 40.0%
TTATGTCGTGGTCAAGATTG+TGG + chr8_2:56955232-56955251 Msa1256710:intron 40.0%
CTTCGGAAAATAATGAGACG+TGG + chr8_2:56955304-56955323 Msa1256710:intron 40.0%
GATTTAGAGGTCCAAAAAGG+AGG + chr8_2:56955471-56955490 Msa1256710:CDS 40.0%
!!! TGCTGGTGGTATTTTGAAAC+TGG - chr8_2:56955661-56955680 None:intergenic 40.0%
ATAATCGCAATGGTTACAGC+TGG + chr8_2:56955828-56955847 Msa1256710:CDS 40.0%
AATGGTTACAGCTGGAATAG+TGG + chr8_2:56955836-56955855 Msa1256710:CDS 40.0%
CAAGCTCTCTAAGTATCTTC+TGG + chr8_2:56955895-56955914 Msa1256710:CDS 40.0%
TTCAATGCTCAAACACCTGA+TGG + chr8_2:56955984-56956003 Msa1256710:CDS 40.0%
TGCATGACAAGTATCTCACT+TGG + chr8_2:56956032-56956051 Msa1256710:CDS 40.0%
GCATGACAAGTATCTCACTT+GGG + chr8_2:56956033-56956052 Msa1256710:CDS 40.0%
ATCCCTGGAAACTTGAATAG+AGG + chr8_2:56956125-56956144 Msa1256710:CDS 40.0%
! GACCTCTATTCAAGTTTCCA+GGG - chr8_2:56956130-56956149 None:intergenic 40.0%
! TGACCTCTATTCAAGTTTCC+AGG - chr8_2:56956131-56956150 None:intergenic 40.0%
TGAATAGAGGTCACTTGGAT+AGG + chr8_2:56956138-56956157 Msa1256710:CDS 40.0%
!!! ATAGTTTTAGGGCCTCTCTT+GGG + chr8_2:56956525-56956544 Msa1256710:three_prime_UTR 40.0%
TTGGATGAAAGCCGAAGACA+AGG - chr8_2:56949763-56949782 None:intergenic 45.0%
TTTGGTGAGGTCCAATAGGA+TGG - chr8_2:56949989-56950008 None:intergenic 45.0%
!! CTCTTGATGGGAGTGTTGAT+TGG + chr8_2:56950250-56950269 Msa1256710:CDS 45.0%
!! CAGATTTGGCTCTGTTTGCT+GGG - chr8_2:56950284-56950303 None:intergenic 45.0%
CAGCAAACAGAGCCAAATCT+GGG + chr8_2:56950283-56950302 Msa1256710:CDS 45.0%
AGCAAACCATCTCCCAGATT+TGG - chr8_2:56950298-56950317 None:intergenic 45.0%
! AAATCTGGGAGATGGTTTGC+TGG + chr8_2:56950297-56950316 Msa1256710:CDS 45.0%
!! TGAATTTTGAGTGTGCACGG+GGG + chr8_2:56951057-56951076 Msa1256710:intron 45.0%
GCGTGCATGTATACCAAACA+TGG - chr8_2:56951461-56951480 None:intergenic 45.0%
! GTGTAGAGATGTGGTGTTAG+TGG - chr8_2:56951645-56951664 None:intergenic 45.0%
TTCCCAGGATTAACTTTCCC+AGG - chr8_2:56952067-56952086 None:intergenic 45.0%
GCTAGTGAAGGTCACCAATA+AGG + chr8_2:56952663-56952682 Msa1256710:intron 45.0%
TAAGCTTTGCACCACTCAAG+TGG + chr8_2:56952889-56952908 Msa1256710:intron 45.0%
TTTGCACACGCGAAAAGGTT+CGG - chr8_2:56953473-56953492 None:intergenic 45.0%
CATGTACATGTGCTCAAGTG+CGG + chr8_2:56953524-56953543 Msa1256710:intron 45.0%
ATGCTAAGGTTGCTAGACCT+TGG - chr8_2:56954089-56954108 None:intergenic 45.0%
!! ACCTAGTTCTGTTCCTGACA+AGG + chr8_2:56954127-56954146 Msa1256710:CDS 45.0%
!! CCTAGTTCTGTTCCTGACAA+GGG + chr8_2:56954128-56954147 Msa1256710:CDS 45.0%
! CTGATAGCCTTAGGAAATGG+AGG + chr8_2:56954525-56954544 Msa1256710:CDS 45.0%
!! TGGTGCTGACCAATTTGATG+AGG + chr8_2:56954572-56954591 Msa1256710:CDS 45.0%
GATGAAGGATTATGGGCTCT+TGG + chr8_2:56954699-56954718 Msa1256710:CDS 45.0%
! GATTATGGGCTCTTGGGTTT+TGG + chr8_2:56954706-56954725 Msa1256710:CDS 45.0%
CTTGAAAGAGGATTGCCACA+AGG - chr8_2:56954804-56954823 None:intergenic 45.0%
CCGAAAGTCCCTTTCAAATG+TGG + chr8_2:56955167-56955186 Msa1256710:intron 45.0%
CTCATCGGCCACATTTGAAA+GGG - chr8_2:56955178-56955197 None:intergenic 45.0%
AACCACAATGTAGGCCTCAT+CGG - chr8_2:56955193-56955212 None:intergenic 45.0%
ATGAGGCCTACATTGTGGTT+TGG + chr8_2:56955193-56955212 Msa1256710:intron 45.0%
TGTGGTCCAAACCACAATGT+AGG - chr8_2:56955202-56955221 None:intergenic 45.0%
!! GGTTATGTTGGCCTCCTTTT+TGG - chr8_2:56955485-56955504 None:intergenic 45.0%
! GCTTCTCTTTTTGTGGAGCA+AGG + chr8_2:56955612-56955631 Msa1256710:CDS 45.0%
AAATGAAGATGGCTACGCTG+AGG - chr8_2:56955704-56955723 None:intergenic 45.0%
CAAGTGGATCAAGTACTCGA+CGG - chr8_2:56955734-56955753 None:intergenic 45.0%
CGAGTACTTGATCCACTTGT+CGG + chr8_2:56955735-56955754 Msa1256710:CDS 45.0%
TTGAAGTTCAGTGAGTCCCT+TGG - chr8_2:56955781-56955800 None:intergenic 45.0%
GCTCCTATAAGTGCATACTG+AGG - chr8_2:56955927-56955946 None:intergenic 45.0%
TGCACTTATAGGAGCTTCTG+AGG + chr8_2:56955932-56955951 Msa1256710:CDS 45.0%
CCAAAGCTCTTCAATCCATC+AGG - chr8_2:56956002-56956021 None:intergenic 45.0%
!! CCTGATGGATTGAAGAGCTT+TGG + chr8_2:56955999-56956018 Msa1256710:CDS 45.0%
TCAACTGAAGATCACATGCC+AGG + chr8_2:56956098-56956117 Msa1256710:CDS 45.0%
!!! GATAGTTTTAGGGCCTCTCT+TGG + chr8_2:56956524-56956543 Msa1256710:three_prime_UTR 45.0%
!!! TCATTTTTTAAAATTATTTT+TGG - chr8_2:56951907-56951926 None:intergenic 5.0%
!! AAAAAAATAAAAACTATAAT+GGG - chr8_2:56952117-56952136 None:intergenic 5.0%
!! AAAAAAAATAAAAACTATAA+TGG - chr8_2:56952118-56952137 None:intergenic 5.0%
!! TTATAATATTAAAATGTTTA+TGG + chr8_2:56953140-56953159 Msa1256710:intron 5.0%
!! TATAATATTAAAATGTTTAT+GGG + chr8_2:56953141-56953160 Msa1256710:intron 5.0%
!! TTATAAAAACAAATAAATTT+AGG + chr8_2:56953557-56953576 Msa1256710:intron 5.0%
!! TTTAAAAAAAAAATAATGTA+TGG + chr8_2:56953939-56953958 Msa1256710:intron 5.0%
!! GACATCACCAATGGCTTGCT+TGG + chr8_2:56949853-56949872 Msa1256710:CDS 50.0%
!! ATCACCAATGGCTTGCTTGG+AGG + chr8_2:56949856-56949875 Msa1256710:CDS 50.0%
TTGCTTGGAGGTCTGCAAAG+AGG + chr8_2:56949868-56949887 Msa1256710:CDS 50.0%
!! GATGGGAGTGTTGATTGGCA+TGG + chr8_2:56950255-56950274 Msa1256710:CDS 50.0%
!! CCAGATTTGGCTCTGTTTGC+TGG - chr8_2:56950285-56950304 None:intergenic 50.0%
CCAGCAAACAGAGCCAAATC+TGG + chr8_2:56950282-56950301 Msa1256710:CDS 50.0%
ACAGAGCCAAATCTGGGAGA+TGG + chr8_2:56950289-56950308 Msa1256710:CDS 50.0%
GGACACACTTATGCCACACA+TGG - chr8_2:56950744-56950763 None:intergenic 50.0%
! TGTGGTGTTAGTGGTGTGGT+TGG - chr8_2:56951636-56951655 None:intergenic 50.0%
! GAGATGTGGTGTTAGTGGTG+TGG - chr8_2:56951640-56951659 None:intergenic 50.0%
AACGTGGCAGTGTAGAGATG+TGG - chr8_2:56951654-56951673 None:intergenic 50.0%
CGTGGCAAATACCTACGTCA+TGG - chr8_2:56952387-56952406 None:intergenic 50.0%
CAATTGGTCGATACGGCCAA+AGG - chr8_2:56953319-56953338 None:intergenic 50.0%
GTTGCTAGACCTTGGTTCAC+TGG - chr8_2:56954081-56954100 None:intergenic 50.0%
CCCTTGTCAGGAACAGAACT+AGG - chr8_2:56954131-56954150 None:intergenic 50.0%
! TCTGTTCCTGACAAGGGTGT+TGG + chr8_2:56954134-56954153 Msa1256710:CDS 50.0%
!! CTGTTCCTGACAAGGGTGTT+GGG + chr8_2:56954135-56954154 Msa1256710:CDS 50.0%
!!! TTGGGTTTTGGGCTTCTGCT+GGG + chr8_2:56954718-56954737 Msa1256710:CDS 50.0%
! TTCTGCTGGGTCTGCCTTTT+TGG + chr8_2:56954731-56954750 Msa1256710:CDS 50.0%
CTTACTTGAAGCCGTGTGTG+TGG - chr8_2:56954947-56954966 None:intergenic 50.0%
CCTCATCGGCCACATTTGAA+AGG - chr8_2:56955179-56955198 None:intergenic 50.0%
CCTTTCAAATGTGGCCGATG+AGG + chr8_2:56955176-56955195 Msa1256710:intron 50.0%
AAGGAGGCCAACATAACCCA+TGG + chr8_2:56955487-56955506 Msa1256710:CDS 50.0%
! AAGCTAGACATGCTTGCTGG+TGG - chr8_2:56955675-56955694 None:intergenic 50.0%
TCGAAGCTAGACATGCTTGC+TGG - chr8_2:56955678-56955697 None:intergenic 50.0%
CTGAAGATCACATGCCAGGA+TGG + chr8_2:56956102-56956121 Msa1256710:CDS 50.0%
AAGTTTCCAGGGATCCATCC+TGG - chr8_2:56956119-56956138 None:intergenic 50.0%
GAACAAGGAAGACCCAAGAG+AGG - chr8_2:56956540-56956559 None:intergenic 50.0%
CAGACCTCCAAGCAAGCCAT+TGG - chr8_2:56949863-56949882 None:intergenic 55.0%
CTTGACCCAACACCCTTGTC+AGG - chr8_2:56954143-56954162 None:intergenic 55.0%
!!! CTTGGGTTTTGGGCTTCTGC+TGG + chr8_2:56954717-56954736 Msa1256710:CDS 55.0%
GGCCGATGAGGCCTACATTG+TGG + chr8_2:56955188-56955207 Msa1256710:intron 60.0%
CACATGCCAGGATGGATCCC+TGG + chr8_2:56956110-56956129 Msa1256710:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 56949695 56956645 56949695 ID=Msa1256710;Name=Msa1256710
chr8_2 mRNA 56949695 56956645 56949695 ID=Msa1256710-mRNA-1;Parent=Msa1256710;Name=Msa1256710-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.8|1|1|1|5|353|648
chr8_2 exon 56949695 56949889 56949695 ID=Msa1256710-mRNA-1:exon:17527;Parent=Msa1256710-mRNA-1
chr8_2 exon 56950219 56950333 56950219 ID=Msa1256710-mRNA-1:exon:17528;Parent=Msa1256710-mRNA-1
chr8_2 exon 56954082 56954299 56954082 ID=Msa1256710-mRNA-1:exon:17529;Parent=Msa1256710-mRNA-1
chr8_2 exon 56954399 56954961 56954399 ID=Msa1256710-mRNA-1:exon:17530;Parent=Msa1256710-mRNA-1
chr8_2 exon 56955437 56956645 56955437 ID=Msa1256710-mRNA-1:exon:17531;Parent=Msa1256710-mRNA-1
chr8_2 CDS 56949695 56949889 56949695 ID=Msa1256710-mRNA-1:cds;Parent=Msa1256710-mRNA-1
chr8_2 CDS 56950219 56950333 56950219 ID=Msa1256710-mRNA-1:cds;Parent=Msa1256710-mRNA-1
chr8_2 CDS 56954082 56954299 56954082 ID=Msa1256710-mRNA-1:cds;Parent=Msa1256710-mRNA-1
chr8_2 CDS 56954399 56954961 56954399 ID=Msa1256710-mRNA-1:cds;Parent=Msa1256710-mRNA-1
chr8_2 CDS 56955437 56956292 56955437 ID=Msa1256710-mRNA-1:cds;Parent=Msa1256710-mRNA-1
chr8_2 three_prime_UTR 56956293 56956645 56956293 ID=Msa1256710-mRNA-1:three_prime_utr;Parent=Msa1256710-mRNA-1
Gene Sequence

>Msa1256710

ATGCGATTCTTTATTCCTCTATATATAGTGAATACTTCCACACACTCTGTTTCATCATTAAATCTCCTTGTCTTCGGCTTTCATCCAAATCAACAACAATCTTCCTCTGCTTCATCATTTTTCTCACTCTTTTTCTTCCTTTTTGTCTTTGAAACTTTGACATCACCAATGGCTTGCTTGGAGGTCTGCAAAGAGGGGAAGTTCAAAGAAGAAACAGAAGAGTTAACTCTTGATGGGAGTGTTGATTGGCATGGTCGCCCAGCAAACAGAGCCAAATCTGGGAGATGGTTTGCTGGAACTATTATACTCTTGAACCAAGGTCTAGCAACCTTAGCATTCTTTGGAGTTGGAGTGAACCTAGTTCTGTTCCTGACAAGGGTGTTGGGTCAAGACAATGCTGCTGCTGCTAACAATGTTAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTTGGTGCTTTCCTTAGTGATTCTTATTGGGGAAGATACAAAACATGTGCTATCTTTCAAGGCATTTTTGTAACTGGTCTAGTATCTTTGTCCGTTACAACATACCTTGCTTTGCTTAGACCAAAAGGTTGTGGAAATGGAAAACTTGAATGTGGGGAACATTCAAGTTTGGAAATGGGAATGTTCTACCTATCAATCTATCTGATAGCCTTAGGAAATGGAGGATATCAACCAAACATTGCAACATTTGGTGCTGACCAATTTGATGAGGATCACTCGAAGGAGAGTTATTCAAAAGTGGCATTTTTTAGCTACTTTTACTTGGCATTGAACCTTGGTTCACTTTTCTCAAACACTATTTTGGGCTATTTTGAAGATGAAGGATTATGGGCTCTTGGGTTTTGGGCTTCTGCTGGGTCTGCCTTTTTGGCCCTTGTACTTTTTCTTGTTGGCACCCCAAAATATAGACACTTTAAACCTTGTGGCAATCCTCTTTCAAGATTCTGCCAAGTGTTTTTTGCTGCTTCAAGGAAATTAGGAGTTCAAATGACATCAAATGGAGATGACTTGTATGTCACAGATGAAAAGGAATCTTCTAACAACTCCAACAGAAAGATTCTCCACACACACGGCTTCAAGTTTTTGGATAGGGCAGCTTATATAACTTCAAGAGATTTAGAGGTCCAAAAAGGAGGCCAACATAACCCATGGTATCTTTGTCCTATTACTCAAGTTGAAGAAGTAAAATGCATACTAAGACTTCTTCCAATTTGGCTTTGCACAATAATCTACTCAGTAGTTTTCACTCAAATGGCTTCTCTTTTTGTGGAGCAAGGCGCCGCAATGAAAACCACTATTTCCAGTTTCAAAATACCACCAGCAAGCATGTCTAGCTTCGACATCCTCAGCGTAGCCATCTTCATTTTCTTCTACCGTCGAGTACTTGATCCACTTGTCGGAAAACTCAAAAAAACAAGTTCCAAGGGACTCACTGAACTTCAAAGAATGGGAATCGGTCTCGTTATAGCTATAATCGCAATGGTTACAGCTGGAATAGTGGAATGTTATAGACTTAAGTATGCAAAACAAGGTGACGCAAGCTCTCTAAGTATCTTCTGGCAAATTCCTCAGTATGCACTTATAGGAGCTTCTGAGGTTTTTATGTATGTAGGACAATTAGAATTCTTCAATGCTCAAACACCTGATGGATTGAAGAGCTTTGGAAGTGCACTTTGCATGACAAGTATCTCACTTGGGAACTATGTGAGTAGCTTAATTGTTAGTATTGTTATGAAGATTTCAACTGAAGATCACATGCCAGGATGGATCCCTGGAAACTTGAATAGAGGTCACTTGGATAGGTTTTTCTTCCTATTGGCTGTTTTGACTTCTTTAGATTTGATTGCTTATATTGCATGTGCAAAGTGGTTTCAGAATATTCAGATGGAATGCAAATATGATAACAATGATGAGCCTAGTAGCTGCAAAGTATAA
Protein sequence

>Msa1256710

MRFFIPLYIVNTSTHSVSSLNLLVFGFHPNQQQSSSASSFFSLFFFLFVFETLTSPMACLEVCKEGKFKEETEELTLDGSVDWHGRPANRAKSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLVSLSVTTYLALLRPKGCGNGKLECGEHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEDHSKESYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFLALVLFLVGTPKYRHFKPCGNPLSRFCQVFFAASRKLGVQMTSNGDDLYVTDEKESSNNSNRKILHTHGFKFLDRAAYITSRDLEVQKGGQHNPWYLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISSFKIPPASMSSFDILSVAIFIFFYRRVLDPLVGKLKKTSSKGLTELQRMGIGLVIAIIAMVTAGIVECYRLKYAKQGDASSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFFFLLAVLTSLDLIAYIACAKWFQNIQMECKYDNNDEPSSCKV*