AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205680 MtrunA17_Chr4g0054891 98.457 648 10 0 1 648 21 668 0.0 1316
Msa1205680 MtrunA17_Chr5g0400371 80.165 605 107 3 57 648 71 675 0.0 983
Msa1205680 MtrunA17_Chr7g0217461 70.840 583 155 5 69 642 3 579 0.0 816
Msa1205680 MtrunA17_Chr1g0213711 58.711 574 225 8 73 645 9 571 0.0 663
Msa1205680 MtrunA17_Chr7g0214461 59.246 557 220 4 84 639 72 622 0.0 659
Msa1205680 MtrunA17_Chr7g0218851 59.227 569 214 7 84 642 40 600 0.0 647
Msa1205680 MtrunA17_Chr4g0011471 53.947 532 239 3 104 631 30 559 0.0 566
Msa1205680 MtrunA17_Chr4g0011041 48.592 568 286 4 69 631 15 581 0.0 530
Msa1205680 MtrunA17_Chr8g0375311 43.915 567 307 4 70 630 20 581 2.68e-167 491
Msa1205680 MtrunA17_Chr8g0375291 44.128 562 303 4 70 625 20 576 2.17e-164 483
Msa1205680 MtrunA17_Chr8g0375341 42.681 567 314 4 70 630 20 581 7.77e-161 474
Msa1205680 MtrunA17_Chr3g0104011 44.346 566 301 7 70 628 2 560 2.83e-159 469
Msa1205680 MtrunA17_Chr8g0375351 42.328 567 316 4 70 630 20 581 1.51e-158 468
Msa1205680 MtrunA17_Chr4g0005901 43.182 572 311 6 61 626 3 566 1.69e-156 462
Msa1205680 MtrunA17_Chr7g0241741 43.009 565 308 6 71 629 3 559 2.74e-155 459
Msa1205680 MtrunA17_Chr8g0375321 42.124 565 316 4 71 629 18 577 1.07e-154 458
Msa1205680 MtrunA17_Chr8g0375331 42.077 568 316 6 70 629 2 564 2.05e-150 447
Msa1205680 MtrunA17_Chr7g0261811 37.543 586 345 6 73 647 10 585 3.29e-142 427
Msa1205680 MtrunA17_Chr7g0261771 37.889 578 340 5 60 628 1 568 3.70e-141 424
Msa1205680 MtrunA17_Chr8g0375361 41.126 586 332 5 51 630 2 580 4.54e-140 421
Msa1205680 MtrunA17_Chr7g0261881 36.177 586 353 6 73 647 10 585 9.02e-140 421
Msa1205680 MtrunA17_Chr3g0142101 37.311 595 356 9 57 647 1 582 5.65e-134 405
Msa1205680 MtrunA17_Chr1g0187241 37.057 564 334 6 64 618 2 553 1.65e-132 402
Msa1205680 MtrunA17_Chr1g0166791 36.332 567 344 5 70 628 4 561 4.22e-129 393
Msa1205680 MtrunA17_Chr5g0399061 39.153 567 327 9 73 628 10 569 6.35e-129 392
Msa1205680 MtrunA17_Chr7g0261791 37.566 567 332 7 73 628 12 567 1.45e-128 392
Msa1205680 MtrunA17_Chr5g0399071 36.731 569 340 7 72 628 7 567 7.30e-126 384
Msa1205680 MtrunA17_Chr3g0142091 36.021 583 359 7 69 647 3 575 2.24e-124 380
Msa1205680 MtrunA17_Chr7g0261851 37.370 578 340 6 60 628 1 565 1.78e-123 379
Msa1205680 MtrunA17_Chr1g0166711 36.299 562 342 4 74 628 9 561 3.82e-123 377
Msa1205680 MtrunA17_Chr3g0112671 36.007 586 350 12 64 639 6 576 2.17e-122 375
Msa1205680 MtrunA17_Chr1g0166741 35.370 540 339 4 74 612 11 541 2.74e-119 367
Msa1205680 MtrunA17_Chr4g0063591 37.919 567 334 9 70 629 2 557 2.85e-117 362
Msa1205680 MtrunA17_Chr7g0240381 35.103 584 355 12 69 647 7 571 9.69e-117 360
Msa1205680 MtrunA17_Chr4g0056431 36.380 569 347 8 71 628 6 570 7.68e-115 356
Msa1205680 MtrunA17_Chr1g0166771 36.111 504 312 4 111 613 12 506 1.74e-113 351
Msa1205680 MtrunA17_Chr3g0114501 35.651 561 343 8 70 622 2 552 1.64e-112 350
Msa1205680 MtrunA17_Chr5g0422881 34.912 570 354 7 90 648 20 583 2.89e-111 347
Msa1205680 MtrunA17_Chr4g0008651 33.048 584 374 10 64 641 9 581 2.22e-109 342
Msa1205680 MtrunA17_Chr3g0077151 37.143 560 298 14 76 621 14 533 5.59e-109 339
Msa1205680 MtrunA17_Chr5g0439381 35.417 576 350 8 69 641 10 566 2.05e-106 334
Msa1205680 MtrunA17_Chr3g0112611 33.167 600 370 14 60 642 1 586 4.50e-106 333
Msa1205680 MtrunA17_Chr4g0014791 35.512 566 324 11 71 626 10 544 2.39e-105 330
Msa1205680 MtrunA17_Chr4g0014871 34.643 560 328 11 77 626 17 548 3.38e-104 327
Msa1205680 MtrunA17_Chr4g0059991 32.373 590 381 5 70 648 5 587 6.95e-104 328
Msa1205680 MtrunA17_Chr7g0261751 37.166 487 275 7 60 516 1 486 1.08e-103 325
Msa1205680 MtrunA17_Chr4g0014841 36.042 566 321 10 71 626 10 544 2.41e-103 325
Msa1205680 MtrunA17_Chr4g0014801 35.366 574 325 12 70 626 2 546 7.09e-103 324
Msa1205680 MtrunA17_Chr7g0261661 37.609 460 266 6 178 628 3 450 4.66e-102 320
Msa1205680 MtrunA17_Chr8g0353031 34.331 568 334 10 92 644 20 563 2.50e-101 320
Msa1205680 MtrunA17_Chr2g0276751 34.513 565 342 9 70 628 18 560 2.84e-101 321
Msa1205680 MtrunA17_Chr7g0255601 33.512 561 358 9 77 628 14 568 8.32e-99 315
Msa1205680 MtrunA17_Chr4g0014781 34.859 568 327 13 71 626 10 546 3.74e-98 311
Msa1205680 MtrunA17_Chr7g0255621 31.434 579 382 8 73 642 3 575 1.01e-97 311
Msa1205680 MtrunA17_Chr7g0214731 32.581 620 374 14 55 639 16 626 1.02e-97 313
Msa1205680 MtrunA17_Chr4g0059981 32.609 552 355 6 96 634 37 584 2.87e-97 310
Msa1205680 MtrunA17_Chr8g0362711 33.333 561 364 5 70 622 4 562 4.48e-97 309
Msa1205680 MtrunA17_Chr2g0284701 31.779 579 375 10 69 629 10 586 5.56e-97 310
Msa1205680 MtrunA17_Chr5g0415791 32.240 549 361 6 90 629 29 575 2.11e-95 306
Msa1205680 MtrunA17_Chr4g0059971 30.277 578 389 5 64 629 7 582 3.73e-95 305
Msa1205680 MtrunA17_Chr1g0193391 31.453 585 362 11 69 647 4 555 1.92e-94 303
Msa1205680 MtrunA17_Chr8g0362781 30.944 572 375 7 70 629 16 579 1.06e-93 301
Msa1205680 MtrunA17_Chr7g0271221 31.670 581 362 11 69 645 4 553 3.02e-93 299
Msa1205680 MtrunA17_Chr7g0255611 31.834 578 377 10 60 628 1 570 3.43e-93 300
Msa1205680 MtrunA17_Chr1g0166731 36.601 459 275 4 177 628 9 458 3.73e-93 296
Msa1205680 MtrunA17_Chr5g0415961 32.574 571 354 9 78 629 12 570 4.45e-92 296
Msa1205680 MtrunA17_Chr8g0379971 32.264 561 348 8 73 602 3 562 8.19e-90 291
Msa1205680 MtrunA17_Chr3g0133341 30.756 569 365 8 86 641 10 562 2.71e-89 288
Msa1205680 MtrunA17_Chr4g0069581 33.333 525 334 7 108 629 4 515 9.09e-88 284
Msa1205680 MtrunA17_Chr7g0261731 39.665 358 203 4 60 414 1 348 5.40e-87 276
Msa1205680 MtrunA17_Chr3g0082631 35.335 433 258 7 212 628 30 456 1.57e-85 276
Msa1205680 MtrunA17_Chr4g0014861 35.748 428 248 9 209 626 13 423 4.58e-82 265
Msa1205680 MtrunA17_Chr8g0362801 32.017 481 310 9 178 648 1 474 7.46e-79 258
Msa1205680 MtrunA17_Chr4g0060001 29.947 571 385 8 64 624 2 567 2.46e-78 261
Msa1205680 MtrunA17_Chr1g0157601 29.304 546 360 9 102 636 27 557 4.16e-78 259
Msa1205680 MtrunA17_Chr1g0157611 30.142 564 366 9 90 641 16 563 6.70e-77 256
Msa1205680 MtrunA17_Chr8g0390331 29.834 543 363 9 92 625 17 550 4.31e-76 254
Msa1205680 MtrunA17_Chr1g0157621 29.650 543 353 10 111 641 1 526 8.44e-76 253
Msa1205680 MtrunA17_Chr7g0240271 28.376 585 406 9 67 641 2 583 3.05e-75 252
Msa1205680 MtrunA17_Chr5g0415841 31.140 456 303 6 178 625 1 453 6.28e-74 245
Msa1205680 MtrunA17_Chr6g0451841 30.741 553 327 11 101 630 16 535 1.32e-71 241
Msa1205680 MtrunA17_Chr8g0379991 31.802 566 338 10 108 629 1 562 1.75e-71 241
Msa1205680 MtrunA17_Chr1g0177591 29.553 582 350 19 61 625 23 561 3.22e-69 235
Msa1205680 MtrunA17_Chr2g0331511 28.090 534 367 8 102 625 33 559 6.77e-68 233
Msa1205680 MtrunA17_Chr4g0003761 28.623 552 374 11 102 642 42 584 8.76e-68 232
Msa1205680 MtrunA17_Chr2g0325951 29.391 575 367 13 77 639 1 548 8.99e-68 231
Msa1205680 MtrunA17_Chr2g0325961 28.671 572 376 11 77 639 1 549 2.86e-67 229
Msa1205680 MtrunA17_Chr7g0235521 30.670 463 307 9 190 641 13 472 5.93e-67 227
Msa1205680 MtrunA17_Chr2g0331521 27.915 566 388 9 73 625 2 560 1.29e-66 229
Msa1205680 MtrunA17_Chr7g0240281 28.283 594 405 10 65 645 4 589 3.18e-66 228
Msa1205680 MtrunA17_Chr2g0331481 28.885 547 346 12 102 625 37 563 1.04e-65 228
Msa1205680 MtrunA17_Chr7g0240131 30.388 464 309 9 190 642 13 473 1.53e-65 223
Msa1205680 MtrunA17_Chr2g0326211 28.769 577 368 11 77 639 1 548 2.44e-65 224
Msa1205680 MtrunA17_Chr7g0240181 30.238 463 309 9 190 641 13 472 1.44e-64 220
Msa1205680 MtrunA17_Chr7g0240211 30.238 463 309 9 190 641 13 472 1.60e-64 220
Msa1205680 MtrunA17_Chr2g0331471 27.346 618 392 16 35 625 39 626 1.86e-64 225
Msa1205680 MtrunA17_Chr1g0147631 28.415 549 372 10 102 639 37 575 8.33e-64 221
Msa1205680 MtrunA17_Chr3g0142111 37.224 317 192 4 57 369 11 324 1.82e-62 211
Msa1205680 MtrunA17_Chr1g0177611 31.690 426 272 11 206 625 20 432 1.24e-61 211
Msa1205680 MtrunA17_Chr7g0240151 28.788 462 299 9 190 641 13 454 1.77e-58 204
Msa1205680 MtrunA17_Chr1g0177631 30.588 425 278 10 206 625 20 432 1.18e-56 198
Msa1205680 MtrunA17_Chr3g0112631 35.274 292 170 8 364 642 3 288 4.04e-56 192
Msa1205680 MtrunA17_Chr2g0331461 28.545 536 362 8 102 625 37 563 8.63e-56 200
Msa1205680 MtrunA17_Chr3g0142121 36.042 283 170 5 365 646 11 283 6.66e-55 189
Msa1205680 MtrunA17_Chr7g0234151 29.817 436 272 10 197 628 13 418 8.19e-44 162
Msa1205680 MtrunA17_Chr7g0234381 30.536 429 267 10 201 628 20 418 1.79e-43 161
Msa1205680 MtrunA17_Chr4g0060071 34.728 239 148 4 391 622 52 289 2.96e-43 157
Msa1205680 MtrunA17_Chr7g0234181 29.639 415 257 9 217 628 31 413 4.44e-40 152
Msa1205680 MtrunA17_Chr7g0261721 36.923 195 116 2 440 628 5 198 1.07e-36 137
Msa1205680 MtrunA17_Chr3g0112651 33.333 189 120 3 177 365 21 203 1.95e-27 110
Msa1205680 MtrunA17_Chr1g0147591 23.196 194 140 3 219 409 9 196 2.96e-22 95.1
Msa1205680 MtrunA17_Chr7g0261831 32.278 158 96 3 321 476 3 151 1.64e-21 93.6
Msa1205680 MtrunA17_Chr7g0261671 37.391 115 72 0 60 174 2 116 4.41e-21 89.4
Msa1205680 MtrunA17_Chr2g0326221 29.817 218 128 6 409 625 24 217 1.02e-20 91.3
Msa1205680 MtrunA17_Chr4g0060061 36.207 116 74 0 212 327 18 133 6.19e-19 83.6
Msa1205680 MtrunA17_Chr4g0014851 42.424 99 57 0 77 175 17 115 1.14e-18 83.6
Msa1205680 MtrunA17_Chr1g0166721 35.922 103 63 1 64 166 2 101 5.95e-18 81.3
Msa1205680 MtrunA17_Chr3g0112661 37.500 112 64 1 78 189 19 124 3.82e-17 78.6
Msa1205680 MtrunA17_Chr8g0382591 36.449 107 66 2 364 468 3 109 1.65e-12 65.5
Msa1205680 MtrunA17_Chr3g0082621 45.312 64 35 0 112 175 8 71 1.99e-11 60.8
Msa1205680 MtrunA17_Chr4g0060051 30.769 104 72 0 70 173 2 105 2.80e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205680 AT1G32450.1 73.401 594 149 4 57 641 1 594 0.0 899
Msa1205680 AT4G21680.1 68.815 574 167 4 73 637 9 579 0.0 791
Msa1205680 AT5G19640.1 60.294 544 198 5 93 634 60 587 0.0 655
Msa1205680 AT3G54140.1 43.993 566 305 6 70 629 2 561 9.45e-169 494
Msa1205680 AT3G54140.2 43.993 566 305 6 70 629 2 561 9.45e-169 494
Msa1205680 AT2G02040.1 42.234 573 320 5 64 630 13 580 9.04e-160 472
Msa1205680 AT1G62200.1 43.013 551 307 5 78 626 38 583 3.54e-158 468
Msa1205680 AT1G62200.2 40.862 580 307 6 78 626 38 612 7.82e-152 452
Msa1205680 AT1G62200.3 40.862 580 307 6 78 626 52 626 1.07e-151 452
Msa1205680 AT5G01180.2 39.859 567 326 6 69 628 2 560 1.80e-146 437
Msa1205680 AT5G01180.3 39.859 567 326 6 69 628 2 560 1.80e-146 437
Msa1205680 AT5G01180.1 39.859 567 326 6 69 628 2 560 1.80e-146 437
Msa1205680 AT2G02020.1 40.175 570 288 9 60 622 11 534 2.94e-139 418
Msa1205680 AT2G26690.1 38.516 566 331 7 70 629 2 556 3.15e-123 377
Msa1205680 AT3G54450.1 37.279 566 316 9 89 639 9 550 1.14e-122 375
Msa1205680 AT5G46050.1 35.507 552 336 6 69 611 4 544 6.91e-120 369
Msa1205680 AT2G02020.2 36.842 570 286 11 60 622 11 513 1.68e-116 358
Msa1205680 AT5G46040.1 34.539 553 342 6 69 612 4 545 1.02e-114 356
Msa1205680 AT2G26690.2 39.048 525 303 7 111 629 10 523 1.22e-113 352
Msa1205680 AT1G12110.1 36.224 588 356 9 69 644 5 585 1.62e-113 353
Msa1205680 AT2G26690.3 39.155 521 300 7 115 629 2 511 1.65e-113 351
Msa1205680 AT2G37900.1 32.975 558 361 7 70 626 16 561 6.07e-111 345
Msa1205680 AT2G40460.1 36.170 564 336 7 70 625 2 549 3.08e-110 344
Msa1205680 AT5G13400.1 34.662 577 354 7 81 641 52 621 1.69e-108 341
Msa1205680 AT3G53960.1 32.799 561 364 7 70 625 15 567 3.21e-107 337
Msa1205680 AT1G69870.1 33.640 544 353 6 92 629 51 592 3.72e-105 332
Msa1205680 AT1G68570.1 34.349 591 366 9 60 641 1 578 2.83e-104 329
Msa1205680 AT3G21670.1 35.106 564 335 8 78 629 12 556 4.00e-102 323
Msa1205680 AT1G59740.1 34.075 584 366 12 64 640 13 584 9.61e-102 322
Msa1205680 AT1G68570.2 34.615 546 345 6 105 641 6 548 4.17e-100 317
Msa1205680 AT1G72140.1 34.103 563 318 9 80 626 22 547 1.11e-97 310
Msa1205680 AT1G27080.1 35.484 558 345 10 92 644 14 561 1.20e-96 308
Msa1205680 AT1G72130.1 35.912 543 299 9 93 626 26 528 4.00e-96 306
Msa1205680 AT1G22540.1 34.435 575 340 10 70 634 8 555 7.96e-96 306
Msa1205680 AT2G37900.2 32.657 493 319 7 135 626 2 482 3.27e-95 302
Msa1205680 AT5G46050.2 36.795 443 258 7 178 611 3 432 3.63e-92 293
Msa1205680 AT1G72125.1 33.569 566 339 9 73 626 11 551 6.20e-91 293
Msa1205680 AT1G33440.1 33.391 575 361 10 61 628 8 567 1.04e-90 293
Msa1205680 AT1G27080.2 34.972 529 329 10 121 644 1 519 3.62e-90 290
Msa1205680 AT1G72120.1 33.392 566 336 10 73 626 11 547 5.76e-90 290
Msa1205680 AT1G69850.1 31.404 570 370 6 71 622 4 570 3.56e-89 289
Msa1205680 AT1G22550.1 33.217 575 330 12 74 626 12 554 8.00e-89 288
Msa1205680 AT1G18880.1 30.906 563 371 6 96 645 23 580 2.27e-86 282
Msa1205680 AT1G22570.1 31.972 563 337 13 67 609 2 538 1.68e-85 279
Msa1205680 AT5G62680.1 30.199 553 358 8 96 629 47 590 1.22e-83 275
Msa1205680 AT3G47960.1 30.254 552 357 8 96 629 65 606 1.81e-83 275
Msa1205680 AT5G62730.1 29.698 596 356 9 55 622 16 576 3.34e-83 273
Msa1205680 AT1G27040.1 30.018 563 371 6 78 631 13 561 8.00e-83 272
Msa1205680 AT1G27040.2 30.018 563 371 6 78 631 9 557 9.12e-83 271
Msa1205680 AT1G22570.2 32.233 515 306 12 112 609 13 501 3.14e-80 264
Msa1205680 AT3G45720.1 27.872 531 361 7 114 641 41 552 1.88e-78 260
Msa1205680 AT5G14940.1 30.541 573 326 15 101 642 16 547 1.92e-78 260
Msa1205680 AT3G45650.1 29.055 561 364 9 73 625 3 537 4.05e-77 256
Msa1205680 AT1G27040.3 30.206 533 349 6 108 631 11 529 5.49e-77 255
Msa1205680 AT3G45710.1 27.599 558 383 8 92 647 21 559 7.78e-77 256
Msa1205680 AT1G72130.2 35.172 435 243 8 201 626 6 410 4.51e-76 249
Msa1205680 AT1G72130.3 35.172 435 243 8 201 626 6 410 4.51e-76 249
Msa1205680 AT3G45680.1 27.993 568 385 9 78 643 8 553 1.71e-75 252
Msa1205680 AT3G45660.2 28.007 607 395 11 43 641 1 573 6.83e-75 251
Msa1205680 AT5G62730.2 29.455 550 328 8 98 622 3 517 1.50e-74 249
Msa1205680 AT3G45660.1 28.648 562 366 10 88 641 18 552 2.35e-74 249
Msa1205680 AT3G45660.3 28.648 562 366 10 88 641 18 552 2.35e-74 249
Msa1205680 AT1G52190.1 27.911 541 365 10 102 625 31 563 1.19e-72 246
Msa1205680 AT3G45650.2 27.939 587 363 10 73 625 3 563 2.72e-72 244
Msa1205680 AT3G16180.1 29.264 557 367 12 86 625 16 562 6.04e-72 243
Msa1205680 AT3G25260.1 28.804 552 337 12 82 626 11 513 7.23e-69 233
Msa1205680 AT3G45700.1 25.887 564 388 11 82 642 5 541 1.15e-67 231
Msa1205680 AT3G01350.1 28.325 579 341 13 101 642 16 557 4.74e-67 229
Msa1205680 AT1G69860.1 30.297 538 359 9 96 629 22 547 1.36e-65 226
Msa1205680 AT3G45690.1 26.355 535 334 9 110 643 36 511 1.92e-62 216
Msa1205680 AT5G28470.2 26.306 536 387 5 90 621 15 546 6.28e-62 216
Msa1205680 AT5G28470.1 26.119 536 386 6 90 621 15 544 4.39e-59 208
Msa1205680 AT3G25280.1 27.907 559 339 15 82 626 11 519 2.38e-58 205
Msa1205680 AT5G11570.1 28.302 530 297 11 102 626 23 474 1.37e-54 194
Msa1205680 AT2G38100.2 25.192 520 327 18 120 621 2 477 1.30e-33 135
Msa1205680 AT2G38100.3 25.283 530 333 19 110 621 15 499 1.84e-33 135
Msa1205680 AT2G38100.1 25.283 530 333 19 110 621 9 493 1.91e-33 135

Find 138 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGGGCTCTTGGGTTT+TGG 0.139139 8_1:+62113113 Msa1205680:CDS
GGTTTAAAGTGTCTATATTT+TGG 0.157297 8_1:-62113187 None:intergenic
CCAGATTTGGCTCTGTTTGC+TGG 0.157495 8_1:-62109413 None:intergenic
TACTAAGACTTCTTCCAATT+TGG 0.183807 8_1:+62113957 Msa1205680:CDS
CTTTCCTAAGTGATTCTTAT+TGG 0.215575 8_1:+62112639 Msa1205680:CDS
CTAGCAACCTTAGCATTCTT+TGG 0.234711 8_1:+62112500 Msa1205680:CDS
ACTTCTTCAACTTGAGTAAT+AGG 0.241585 8_1:-62113926 None:intergenic
ATTCCTCAGTATGCACTTAT+AGG 0.250210 8_1:+62114328 Msa1205680:CDS
TTTCCTAAGTGATTCTTATT+GGG 0.261209 8_1:+62112640 Msa1205680:CDS
TTTGCTGCTTCAAGGAAATT+AGG 0.280281 8_1:+62113247 Msa1205680:CDS
TATAACTTCAAGAGATTTAG+AGG 0.282564 8_1:+62113865 Msa1205680:CDS
CTGGAATAGTGGAATGTTAT+AGG 0.286030 8_1:+62114254 Msa1205680:CDS
GTTTACATCTTCTCTCTTGT+TGG 0.299285 8_1:+62112614 Msa1205680:CDS
GAGGAAGATTGTTGTTGATT+TGG 0.311217 8_1:-62108929 None:intergenic
TCAAAGTTTCAAAGACAAAA+AGG 0.325831 8_1:-62108982 None:intergenic
ATTATTGTGCAAAGCCAAAT+TGG 0.326777 8_1:-62113971 None:intergenic
TTTCCATTTCCACAACCTTT+TGG 0.329693 8_1:-62112851 None:intergenic
TTAAAGAGACTCAGGTAAAA+AGG 0.330271 8_1:-62114801 None:intergenic
CAACCAAACATTGCAACATT+TGG 0.338350 8_1:+62112959 Msa1205680:CDS
TGACCTCTATTCAAGTTTCC+AGG 0.340603 8_1:-62114535 None:intergenic
AGCAAACCATCTCCCAGATT+TGG 0.342083 8_1:-62109426 None:intergenic
TTTATGTACTTTGAAATTCA+TGG 0.344293 8_1:+62114865 Msa1205680:three_prime_UTR
TTGAGTGATCCTCATCAAAT+TGG 0.346545 8_1:-62112988 None:intergenic
AGAGATTTAGAGGTCCAAAA+AGG 0.353250 8_1:+62113875 Msa1205680:CDS
ATGTTAACACTTCTCCATAT+TGG 0.354261 8_1:-62114706 None:intergenic
ATCACCAATGGCTTGCTTAG+AGG 0.355045 8_1:+62109006 Msa1205680:CDS
AAGTATAATCATTTCCAATA+TGG 0.355664 8_1:+62114692 Msa1205680:exon
ACAGAAGAGTTAACTCTTGA+TGG 0.370181 8_1:+62109368 Msa1205680:CDS
GGAACATTCAAGTTTGGAAA+TGG 0.377855 8_1:+62112886 Msa1205680:CDS
ATGTGGGGAACATTCAAGTT+TGG 0.379230 8_1:+62112880 Msa1205680:CDS
CCTGATGGATTGAAGAGCTT+TGG 0.380582 8_1:+62114406 Msa1205680:CDS
AGACCAAAAGGTTGTGGAAA+TGG 0.381408 8_1:+62112848 Msa1205680:CDS
CCAGCAAACAGAGCCAAATC+TGG 0.383414 8_1:+62109413 Msa1205680:CDS
TAGAAGAAAATGTGATGGTT+TGG 0.386182 8_1:+62114766 Msa1205680:three_prime_UTR
ACCTTAGCATTCTTTGGAGT+TGG 0.386511 8_1:+62112506 Msa1205680:CDS
CAGATTTGGCTCTGTTTGCT+GGG 0.386593 8_1:-62109412 None:intergenic
TCATTAAATCTCCTTGTCTT+CGG 0.392639 8_1:+62108899 Msa1205680:CDS
GCACCAAATGTTGCAATGTT+TGG 0.396893 8_1:-62112962 None:intergenic
TCTGTTCCTGACAAGGGTGT+TGG 0.404195 8_1:+62112541 Msa1205680:CDS
AAAACATGTGCTATCTTTCA+AGG 0.405049 8_1:+62112671 Msa1205680:CDS
GTAAGTTCCATTGCTAATGA+TGG 0.408793 8_1:+62114982 Msa1205680:three_prime_UTR
CTGTTCCTGACAAGGGTGTT+GGG 0.412390 8_1:+62112542 Msa1205680:CDS
GGAGTTCAAATGACATCAAA+TGG 0.414438 8_1:+62113268 Msa1205680:CDS
GATGAAGGATTATGGGCTCT+TGG 0.416318 8_1:+62113106 Msa1205680:CDS
ATGAAGGATTATGGGCTCTT+GGG 0.420386 8_1:+62113107 Msa1205680:CDS
CTTGACCCAACACCCTTGTC+AGG 0.427124 8_1:-62112547 None:intergenic
CAAGCTCTCTAAGTATCTTC+TGG 0.430069 8_1:+62114302 Msa1205680:CDS
CTCTTGATGGGAGTGTTGAT+TGG 0.437188 8_1:+62109381 Msa1205680:CDS
CTTGTATGTCACAGATGAAA+AGG 0.442563 8_1:+62113297 Msa1205680:CDS
TTCAATGCTCAAACACCTGA+TGG 0.444902 8_1:+62114391 Msa1205680:CDS
CTTGCTTTGCTTAGACCAAA+AGG 0.446216 8_1:+62112836 Msa1205680:CDS
GAACATTCAAGTTTGGAAAT+GGG 0.449440 8_1:+62112887 Msa1205680:CDS
TCGAAGCTAGACATGCTTGC+TGG 0.451741 8_1:-62114082 None:intergenic
AGGCTATCAGATAGATTGAT+AGG 0.454195 8_1:-62112919 None:intergenic
AAATCTGGGAGATGGTTTGC+TGG 0.458977 8_1:+62109428 Msa1205680:CDS
AAGAAGTCAAAACAGCCAAT+AGG 0.459055 8_1:-62114576 None:intergenic
TATCTGATAGCCTTAGGAAA+TGG 0.460404 8_1:+62112929 Msa1205680:CDS
CTCACTGAACTTCAAAGAAT+GGG 0.463268 8_1:+62114193 Msa1205680:CDS
CCAAAGCTCTTCAATCCATC+AGG 0.464327 8_1:-62114406 None:intergenic
TTGCTTAGACCAAAAGGTTG+TGG 0.464656 8_1:+62112842 Msa1205680:CDS
GATTATACTTTGCAGCTACT+AGG 0.467336 8_1:-62114679 None:intergenic
TGAATAGAGGTCACTTGGAT+AGG 0.471177 8_1:+62114545 Msa1205680:CDS
GAAATTCATGGTTGTATCCA+TGG 0.472052 8_1:+62114877 Msa1205680:three_prime_UTR
TCAATCTATCTGATAGCCTT+AGG 0.473052 8_1:+62112923 Msa1205680:CDS
ATAAACTGAAAATCTTAGTC+AGG 0.474709 8_1:-62114847 None:intergenic
ACTCACTGAACTTCAAAGAA+TGG 0.482231 8_1:+62114192 Msa1205680:CDS
TTGATATCCTCCATTTCCTA+AGG 0.501268 8_1:-62112939 None:intergenic
AAGTTTCCAGGGATCCATCC+TGG 0.501655 8_1:-62114523 None:intergenic
TTGAAGTTCAGTGAGTCCCT+TGG 0.502306 8_1:-62114185 None:intergenic
GAAGTATTCACTATATATAG+AGG 0.510398 8_1:-62108860 None:intergenic
CGAGTACTTGATCCACTTGT+CGG 0.511632 8_1:+62114142 Msa1205680:CDS
TATTATGAATAAGAGAAGGA+AGG 0.513383 8_1:+62114733 Msa1205680:three_prime_UTR
TCAACTGAAGATCACATGCC+AGG 0.517301 8_1:+62114505 Msa1205680:CDS
CACATGCCAGGATGGATCCC+TGG 0.519851 8_1:+62114517 Msa1205680:CDS
ACTTGGCAGAATCTTGAAAG+AGG 0.521999 8_1:-62113220 None:intergenic
AAAGGAGAGTTATTCAAAAG+TGG 0.523525 8_1:+62113009 Msa1205680:CDS
GAACTTCAAAGAATGGGAAT+CGG 0.527583 8_1:+62114199 Msa1205680:CDS
ATAATCGCAATGGTTACAGC+TGG 0.529971 8_1:+62114235 Msa1205680:CDS
ATTATGAATAAGAGAAGGAA+GGG 0.530098 8_1:+62114734 Msa1205680:three_prime_UTR
CCCTTGTCAGGAACAGAACT+AGG 0.535224 8_1:-62112535 None:intergenic
AATGGTTACAGCTGGAATAG+TGG 0.536685 8_1:+62114243 Msa1205680:CDS
CAGACCTCTAAGCAAGCCAT+TGG 0.536733 8_1:-62109010 None:intergenic
AAAGATACCATGGGTTATGT+TGG 0.537608 8_1:-62113901 None:intergenic
TTCCTAAGTGATTCTTATTG+GGG 0.537811 8_1:+62112641 Msa1205680:CDS
TGAAACTTTGACATCACCAA+TGG 0.540822 8_1:+62108994 Msa1205680:CDS
ATGCTAAGGTTGCTAGACCT+TGG 0.541001 8_1:-62112493 None:intergenic
AAACTTGAATAGAGGTCACT+TGG 0.546503 8_1:+62114540 Msa1205680:CDS
CAGCAAACAGAGCCAAATCT+GGG 0.549410 8_1:+62109414 Msa1205680:CDS
GTGGTTTCAGAATATTCAGA+TGG 0.554184 8_1:+62114630 Msa1205680:CDS
CTGAAGATCACATGCCAGGA+TGG 0.554639 8_1:+62114509 Msa1205680:CDS
TGCATGACAAGTATCTCACT+TGG 0.556372 8_1:+62114439 Msa1205680:CDS
ACCTAGTTCTGTTCCTGACA+AGG 0.556376 8_1:+62112534 Msa1205680:CDS
GACCTCTATTCAAGTTTCCA+GGG 0.557167 8_1:-62114534 None:intergenic
TGTGTGGAGAATCTTTCTGT+TGG 0.563547 8_1:-62113335 None:intergenic
AACATGTCCATCATTAGCAA+TGG 0.564737 8_1:-62114989 None:intergenic
CAGAAGAGTTAACTCTTGAT+GGG 0.565310 8_1:+62109369 Msa1205680:CDS
TGCACTTATAGGAGCTTCTG+AGG 0.569295 8_1:+62114339 Msa1205680:CDS
ACGGTAGAAGAAAATGAAGA+TGG 0.571774 8_1:-62114119 None:intergenic
CTGATAGCCTTAGGAAATGG+AGG 0.572975 8_1:+62112932 Msa1205680:CDS
CTTGAAAGAGGATTGCCACA+AGG 0.573760 8_1:-62113208 None:intergenic
GAAATGGAAAACTTGAATGT+GGG 0.577470 8_1:+62112864 Msa1205680:CDS
CAAAGCAAGGTATGTTGTAA+CGG 0.578717 8_1:-62112822 None:intergenic
CTGCTAACAATGTTAGCAAG+TGG 0.580663 8_1:+62112582 Msa1205680:CDS
TTGGATGAAAGCCGAAGACA+AGG 0.581750 8_1:-62108910 None:intergenic
TATAGACACTTTAAACCTTG+TGG 0.582951 8_1:+62113193 Msa1205680:CDS
ATCCCTGGAAACTTGAATAG+AGG 0.584308 8_1:+62114532 Msa1205680:CDS
CGTTATAGCTATAATCGCAA+TGG 0.587150 8_1:+62114225 Msa1205680:CDS
TTCCCCAATAAGAATCACTT+AGG 0.589696 8_1:-62112643 None:intergenic
ACAGAGCCAAATCTGGGAGA+TGG 0.590338 8_1:+62109420 Msa1205680:CDS
GAATACAGTTAAAGAGACTC+AGG 0.593665 8_1:-62114809 None:intergenic
AACAATGTTAGCAAGTGGAC+TGG 0.597557 8_1:+62112587 Msa1205680:CDS
TCCAACTCCAAAGAATGCTA+AGG 0.597785 8_1:-62112507 None:intergenic
GGAAATGGAAAACTTGAATG+TGG 0.600088 8_1:+62112863 Msa1205680:CDS
AAGTTCAATTTATACAACCA+TGG 0.603449 8_1:-62114894 None:intergenic
TATATATTATGAATAAGAGA+AGG 0.610955 8_1:+62114729 Msa1205680:three_prime_UTR
CTTATATTGCATGTGCAAAG+TGG 0.617065 8_1:+62114611 Msa1205680:CDS
CCTAGTTCTGTTCCTGACAA+GGG 0.617734 8_1:+62112535 Msa1205680:CDS
GCATGACAAGTATCTCACTT+GGG 0.623076 8_1:+62114440 Msa1205680:CDS
GTAATAGGACAAAGATACCA+TGG 0.629501 8_1:-62113911 None:intergenic
AGTACTAGAAGAAAATGTGA+TGG 0.631431 8_1:+62114761 Msa1205680:three_prime_UTR
GATGGGAGTGTTGATTGGCA+TGG 0.632528 8_1:+62109386 Msa1205680:CDS
CTTACTTGAAGCCGTGTGTG+TGG 0.633341 8_1:-62113351 None:intergenic
TAATGATGAAACAGAGTGTG+TGG 0.633725 8_1:-62108882 None:intergenic
AGGCTTAAGTATGCAAAACA+AGG 0.635128 8_1:+62114274 Msa1205680:CDS
TGGTGCTGACCAATTTGATG+AGG 0.636240 8_1:+62112979 Msa1205680:CDS
AGAAAGATTCTCCACACACA+CGG 0.639314 8_1:+62113340 Msa1205680:CDS
ATTTGATGAGGATCACTCAA+AGG 0.639587 8_1:+62112991 Msa1205680:CDS
AAGCTAGACATGCTTGCTGG+TGG 0.641340 8_1:-62114079 None:intergenic
GAACAAGGAAGACCCAAGAG+AGG 0.644148 8_1:-62114944 None:intergenic
TAATAGGACAAAGATACCAT+GGG 0.644527 8_1:-62113910 None:intergenic
AAGGAGGCCAACATAACCCA+TGG 0.645622 8_1:+62113894 Msa1205680:CDS
TTGCTTAGAGGTCTGCAAAG+AGG 0.646487 8_1:+62109018 Msa1205680:CDS
TGTTTGAGAAAAGTGAACCA+AGG 0.671848 8_1:-62113063 None:intergenic
AAATGAAGATGGCTACGCTG+AGG 0.695724 8_1:-62114108 None:intergenic
TTTAATCTACCAGTGAACCA+AGG 0.698549 8_1:+62112476 Msa1205680:intron
AAATGGAAAACTTGAATGTG+GGG 0.708899 8_1:+62112865 Msa1205680:CDS
CAAGTGGATCAAGTACTCGA+CGG 0.715679 8_1:-62114138 None:intergenic
GCTCCTATAAGTGCATACTG+AGG 0.719671 8_1:-62114331 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTATTTTT+AGG + chr8_1:62110532-62110551 Msa1205680:intron 0.0%
!!! TTTTTTATTTTTTATTTTTA+GGG + chr8_1:62110533-62110552 Msa1205680:intron 0.0%
!! AATATTATATAGTTAAACTA+AGG + chr8_1:62109262-62109281 Msa1205680:intron 10.0%
!!! TTTATTTTATTACATCAAAT+TGG + chr8_1:62109524-62109543 Msa1205680:intron 10.0%
!! AATATGGTATTATAAATTAA+GGG - chr8_1:62109839-62109858 None:intergenic 10.0%
!!! AAATTCAAACATTTTAATTT+AGG - chr8_1:62112175-62112194 None:intergenic 10.0%
!! AATATTTAATTCATTAGAAA+GGG - chr8_1:62112206-62112225 None:intergenic 10.0%
!! AAATATTTAATTCATTAGAA+AGG - chr8_1:62112207-62112226 None:intergenic 10.0%
!!! AACATTATATTTTAGAAACA+AGG - chr8_1:62109078-62109097 None:intergenic 15.0%
!! CACATATCTAAATATAAATT+TGG + chr8_1:62109574-62109593 Msa1205680:intron 15.0%
!!! CATATATATGATTTAAGATA+GGG - chr8_1:62109815-62109834 None:intergenic 15.0%
!! GAATATGGTATTATAAATTA+AGG - chr8_1:62109840-62109859 None:intergenic 15.0%
!!! TATGGTTTTATTAATACATA+GGG - chr8_1:62109896-62109915 None:intergenic 15.0%
!!! ATATGGTTTTATTAATACAT+AGG - chr8_1:62109897-62109916 None:intergenic 15.0%
!! TGAATAAACATATATGATTA+CGG - chr8_1:62110108-62110127 None:intergenic 15.0%
!!! TTGTTTTTTGTTACTTTTTT+TGG - chr8_1:62110153-62110172 None:intergenic 15.0%
!! TTACTAATGTGTTTAATTAT+GGG - chr8_1:62110915-62110934 None:intergenic 15.0%
!! TCAATTCAAACATTAAAAAT+AGG - chr8_1:62111185-62111204 None:intergenic 15.0%
!! AAAAAAAAAATAATGTATGG+AGG + chr8_1:62112348-62112367 Msa1205680:intron 15.0%
!! TAGTAAGAAATTAATTAAAG+TGG - chr8_1:62112739-62112758 None:intergenic 15.0%
!!! TAATTTGTTCATTTATGTTA+TGG + chr8_1:62112770-62112789 Msa1205680:intron 15.0%
!! TATATATTATGAATAAGAGA+AGG + chr8_1:62114729-62114748 Msa1205680:three_prime_UTR 15.0%
!! ATATGGAAAAGTTGTATTTA+TGG - chr8_1:62109047-62109066 None:intergenic 20.0%
!! GAAACAAGGAATAAATAATA+TGG - chr8_1:62109064-62109083 None:intergenic 20.0%
!!! TGTGTAGTTAATTTTTCAAA+AGG - chr8_1:62109734-62109753 None:intergenic 20.0%
!!! CCATATATATGATTTAAGAT+AGG - chr8_1:62109816-62109835 None:intergenic 20.0%
!! CCTATCTTAAATCATATATA+TGG + chr8_1:62109813-62109832 Msa1205680:intron 20.0%
!!! AAACCATATTTTATATGATG+TGG + chr8_1:62109908-62109927 Msa1205680:intron 20.0%
!! AATCCACATCATATAAAATA+TGG - chr8_1:62109914-62109933 None:intergenic 20.0%
!!! ATTTTATATGATGTGGATTA+AGG + chr8_1:62109915-62109934 Msa1205680:intron 20.0%
!! ATATCAAATAGATAGCTTAT+TGG - chr8_1:62110047-62110066 None:intergenic 20.0%
!! TACACTTTCATATATACTTA+TGG + chr8_1:62110828-62110847 Msa1205680:intron 20.0%
!! GTTACTAATGTGTTTAATTA+TGG - chr8_1:62110916-62110935 None:intergenic 20.0%
!! TAAATAGTAGTGACAAAATT+TGG - chr8_1:62110966-62110985 None:intergenic 20.0%
!! TTTGTCCTAAATAAAATGTT+AGG + chr8_1:62111131-62111150 Msa1205680:intron 20.0%
!!! TCATACCTAACATTTTATTT+AGG - chr8_1:62111139-62111158 None:intergenic 20.0%
!!! ACACAATCTTTTAGATTTTT+TGG + chr8_1:62111387-62111406 Msa1205680:intron 20.0%
!! TACAATGTATAAAATATGCA+AGG - chr8_1:62111438-62111457 None:intergenic 20.0%
!! AGGAAAAATATTTCTTGATT+TGG - chr8_1:62111700-62111719 None:intergenic 20.0%
!!! ATCAAGAAATATTTTTCCTT+TGG + chr8_1:62111701-62111720 Msa1205680:intron 20.0%
!!! AAATAAATTTAGGTTAAGAG+AGG + chr8_1:62111973-62111992 Msa1205680:intron 20.0%
!!! AATAAATTTAGGTTAAGAGA+GGG + chr8_1:62111974-62111993 Msa1205680:intron 20.0%
!! TTCTATCACATATTATTTGT+TGG - chr8_1:62112111-62112130 None:intergenic 20.0%
!!! TCAAACATTTTAATTTAGGA+TGG - chr8_1:62112171-62112190 None:intergenic 20.0%
!! TCATGAAAAAAAAAGTTCAT+AGG + chr8_1:62112282-62112301 Msa1205680:intron 20.0%
!!! ATTTTTTAGCTACTTTTACT+TGG + chr8_1:62113033-62113052 Msa1205680:CDS 20.0%
!!! TTTAAAGTGTCTATATTTTG+GGG - chr8_1:62113188-62113207 None:intergenic 20.0%
!!! GTTTAAAGTGTCTATATTTT+GGG - chr8_1:62113189-62113208 None:intergenic 20.0%
!! GTAATTAAACAATAGAACTT+CGG + chr8_1:62113694-62113713 Msa1205680:intron 20.0%
!! ATATAAGTCATAATTGCATT+TGG + chr8_1:62113765-62113784 Msa1205680:intron 20.0%
!! ATAGATGATAAATGGAAAAT+TGG - chr8_1:62113817-62113836 None:intergenic 20.0%
!! AAGTATAATCATTTCCAATA+TGG + chr8_1:62114692-62114711 Msa1205680:exon 20.0%
!!! TTTATGTACTTTGAAATTCA+TGG + chr8_1:62114865-62114884 Msa1205680:three_prime_UTR 20.0%
!! AACTTACAAAAAATGAAAGA+AGG - chr8_1:62114969-62114988 None:intergenic 20.0%
!! GAAGTATTCACTATATATAG+AGG - chr8_1:62108863-62108882 None:intergenic 25.0%
! TCAAAGTTTCAAAGACAAAA+AGG - chr8_1:62108985-62109004 None:intergenic 25.0%
!! GGACTTTAATTTAGTAATGT+TGG - chr8_1:62109101-62109120 None:intergenic 25.0%
!!! AATCAAACAGAGTTTTGTTT+TGG - chr8_1:62109157-62109176 None:intergenic 25.0%
! TTAACACATATACGTCAAAA+TGG - chr8_1:62109317-62109336 None:intergenic 25.0%
! ATGTGTTAAAAAATTTGTGC+AGG + chr8_1:62109328-62109347 Msa1205680:intron 25.0%
! TGTGTTAAAAAATTTGTGCA+GGG + chr8_1:62109329-62109348 Msa1205680:intron 25.0%
!! GCAATTTTTATGTGTAGATT+TGG - chr8_1:62109475-62109494 None:intergenic 25.0%
! TAACGTAAAACTTCTTTGTT+AGG - chr8_1:62109695-62109714 None:intergenic 25.0%
! TGGACTCATAAAAATGAATA+TGG - chr8_1:62109855-62109874 None:intergenic 25.0%
!!! ACGTATAATTTGATGATGAT+AGG + chr8_1:62110221-62110240 Msa1205680:intron 25.0%
! ATTGCATATTCAATAATAGC+TGG - chr8_1:62110301-62110320 None:intergenic 25.0%
! GAATATGCAATGCAATTAAT+CGG + chr8_1:62110310-62110329 Msa1205680:intron 25.0%
! ACAACTTTAATTAACACTAC+AGG + chr8_1:62110455-62110474 Msa1205680:intron 25.0%
!!! TTTTTAGGGTTTTGATTTGT+TGG + chr8_1:62110547-62110566 Msa1205680:intron 25.0%
! AGACAGAAAATAGGAAAAAA+AGG + chr8_1:62110672-62110691 Msa1205680:intron 25.0%
! TACCATATTCTTAACCTTAT+TGG - chr8_1:62111082-62111101 None:intergenic 25.0%
! AATAAGGTTAAGAATATGGT+AGG + chr8_1:62111081-62111100 Msa1205680:intron 25.0%
!!! CAATCTTTTAGATTTTTTGG+TGG + chr8_1:62111390-62111409 Msa1205680:intron 25.0%
! GTATAAAATATGCAAGGTTT+CGG - chr8_1:62111432-62111451 None:intergenic 25.0%
!!! GGACTTGTTTTTTTTGTTTT+AGG - chr8_1:62111758-62111777 None:intergenic 25.0%
! AAAAACAAGTCCTATTAGTT+AGG + chr8_1:62111766-62111785 Msa1205680:intron 25.0%
! TGAACAAATATGGTGTAATT+TGG - chr8_1:62112047-62112066 None:intergenic 25.0%
! TTAGATCTTCTGAACAAATA+TGG - chr8_1:62112057-62112076 None:intergenic 25.0%
! TTTCCTAAGTGATTCTTATT+GGG + chr8_1:62112640-62112659 Msa1205680:CDS 25.0%
! ATGTTATGGTTTGATATAAC+AGG + chr8_1:62112784-62112803 Msa1205680:intron 25.0%
! TGTTATGGTTTGATATAACA+GGG + chr8_1:62112785-62112804 Msa1205680:intron 25.0%
!! ACTTTTCTCAAACACTATTT+TGG + chr8_1:62113072-62113091 Msa1205680:CDS 25.0%
!! CTTTTCTCAAACACTATTTT+GGG + chr8_1:62113073-62113092 Msa1205680:CDS 25.0%
!!! ATTTTGAAGATGAAGGATTA+TGG + chr8_1:62113098-62113117 Msa1205680:CDS 25.0%
!!! TTTTGAAGATGAAGGATTAT+GGG + chr8_1:62113099-62113118 Msa1205680:CDS 25.0%
!!! GGTTTAAAGTGTCTATATTT+TGG - chr8_1:62113190-62113209 None:intergenic 25.0%
! TGTAAACATCAATTCGTTAT+TGG - chr8_1:62113391-62113410 None:intergenic 25.0%
! TTGTTTAATTACTCTTTAGC+AGG - chr8_1:62113686-62113705 None:intergenic 25.0%
! TATAACTTCAAGAGATTTAG+AGG + chr8_1:62113865-62113884 Msa1205680:CDS 25.0%
!!! TATTTTGAAACTGGAAATAG+TGG - chr8_1:62114059-62114078 None:intergenic 25.0%
! TATTATGAATAAGAGAAGGA+AGG + chr8_1:62114733-62114752 Msa1205680:three_prime_UTR 25.0%
! ATTATGAATAAGAGAAGGAA+GGG + chr8_1:62114734-62114753 Msa1205680:three_prime_UTR 25.0%
! ATAAACTGAAAATCTTAGTC+AGG - chr8_1:62114850-62114869 None:intergenic 25.0%
! AAGTTCAATTTATACAACCA+TGG - chr8_1:62114897-62114916 None:intergenic 25.0%
!!! AAGAGACAATGATAGTTTTA+GGG + chr8_1:62114921-62114940 Msa1205680:three_prime_UTR 25.0%
! AAAAAATGAAAGAAGGAACA+AGG - chr8_1:62114962-62114981 None:intergenic 25.0%
TCATTAAATCTCCTTGTCTT+CGG + chr8_1:62108899-62108918 Msa1205680:CDS 30.0%
TGAGAAAAATGATGAAACAG+AGG - chr8_1:62108951-62108970 None:intergenic 30.0%
! GGATGGATATATCTGTATTT+TGG - chr8_1:62109122-62109141 None:intergenic 30.0%
TACAGATATATCCATCCTAT+TGG + chr8_1:62109125-62109144 Msa1205680:intron 30.0%
GTGTTAAAAAATTTGTGCAG+GGG + chr8_1:62109330-62109349 Msa1205680:intron 30.0%
!!! GTGGATTAAGGTTTTAAGTT+AGG + chr8_1:62109927-62109946 Msa1205680:intron 30.0%
!!! AGTGTTACTTAGGTCAATTT+TGG + chr8_1:62109958-62109977 Msa1205680:intron 30.0%
ATAGGATTATAAAAGAGTCG+TGG + chr8_1:62110239-62110258 Msa1205680:intron 30.0%
TATTCAATAATAGCTGGACA+AGG - chr8_1:62110295-62110314 None:intergenic 30.0%
! TGTTCTATCTAAAACCGAAA+CGG - chr8_1:62110588-62110607 None:intergenic 30.0%
! TCTTATTTGCAATTACGTGT+CGG - chr8_1:62110761-62110780 None:intergenic 30.0%
AATAAGATTAACCATGACGT+AGG + chr8_1:62110774-62110793 Msa1205680:intron 30.0%
CACCAATAAGGTTAAGAATA+TGG + chr8_1:62111077-62111096 Msa1205680:intron 30.0%
!! TCTTTTAGATTTTTTGGTGG+TGG + chr8_1:62111393-62111412 Msa1205680:intron 30.0%
GTATTTACAATTGGTCGATA+CGG - chr8_1:62111727-62111746 None:intergenic 30.0%
AACTAAGATATCAAAGGTGA+AGG + chr8_1:62111794-62111813 Msa1205680:intron 30.0%
CTTTCCTAAGTGATTCTTAT+TGG + chr8_1:62112639-62112658 Msa1205680:CDS 30.0%
TTCCTAAGTGATTCTTATTG+GGG + chr8_1:62112641-62112660 Msa1205680:CDS 30.0%
AAAACATGTGCTATCTTTCA+AGG + chr8_1:62112671-62112690 Msa1205680:CDS 30.0%
GAAATGGAAAACTTGAATGT+GGG + chr8_1:62112864-62112883 Msa1205680:CDS 30.0%
AAATGGAAAACTTGAATGTG+GGG + chr8_1:62112865-62112884 Msa1205680:CDS 30.0%
! GAACATTCAAGTTTGGAAAT+GGG + chr8_1:62112887-62112906 Msa1205680:CDS 30.0%
AAAGGAGAGTTATTCAAAAG+TGG + chr8_1:62113009-62113028 Msa1205680:CDS 30.0%
TATAGACACTTTAAACCTTG+TGG + chr8_1:62113193-62113212 Msa1205680:CDS 30.0%
CCTGCAATATAGATGATAAA+TGG - chr8_1:62113825-62113844 None:intergenic 30.0%
CCATTTATCATCTATATTGC+AGG + chr8_1:62113822-62113841 Msa1205680:intron 30.0%
! TCATCTATATTGCAGGTTTT+TGG + chr8_1:62113829-62113848 Msa1205680:intron 30.0%
!! TATATTGCAGGTTTTTGGAT+AGG + chr8_1:62113834-62113853 Msa1205680:intron 30.0%
!! ATATTGCAGGTTTTTGGATA+GGG + chr8_1:62113835-62113854 Msa1205680:intron 30.0%
TAATAGGACAAAGATACCAT+GGG - chr8_1:62113913-62113932 None:intergenic 30.0%
ACTTCTTCAACTTGAGTAAT+AGG - chr8_1:62113929-62113948 None:intergenic 30.0%
TACTAAGACTTCTTCCAATT+TGG + chr8_1:62113957-62113976 Msa1205680:CDS 30.0%
ATTATTGTGCAAAGCCAAAT+TGG - chr8_1:62113974-62113993 None:intergenic 30.0%
ACTCAAAAAAACAAGTTCCA+AGG + chr8_1:62114168-62114187 Msa1205680:CDS 30.0%
CTCAAAAAAACAAGTTCCAA+GGG + chr8_1:62114169-62114188 Msa1205680:CDS 30.0%
!! TCTGAGGTTTTTATGTATGT+AGG + chr8_1:62114355-62114374 Msa1205680:CDS 30.0%
ATGTTAACACTTCTCCATAT+TGG - chr8_1:62114709-62114728 None:intergenic 30.0%
AGTACTAGAAGAAAATGTGA+TGG + chr8_1:62114761-62114780 Msa1205680:three_prime_UTR 30.0%
TAGAAGAAAATGTGATGGTT+TGG + chr8_1:62114766-62114785 Msa1205680:three_prime_UTR 30.0%
TTAAAGAGACTCAGGTAAAA+AGG - chr8_1:62114804-62114823 None:intergenic 30.0%
! GAAGAGACAATGATAGTTTT+AGG + chr8_1:62114920-62114939 Msa1205680:three_prime_UTR 30.0%
TAATGATGAAACAGAGTGTG+TGG - chr8_1:62108885-62108904 None:intergenic 35.0%
! GAGGAAGATTGTTGTTGATT+TGG - chr8_1:62108932-62108951 None:intergenic 35.0%
TGAAACTTTGACATCACCAA+TGG + chr8_1:62108994-62109013 Msa1205680:CDS 35.0%
!!! TTGTTTTGGTGAGTTCCAAT+AGG - chr8_1:62109143-62109162 None:intergenic 35.0%
CGTGAGTGATCAACATAATT+TGG - chr8_1:62109193-62109212 None:intergenic 35.0%
!! AGTTTTTGAGCATGCACTTA+CGG + chr8_1:62109223-62109242 Msa1205680:intron 35.0%
ACAGAAGAGTTAACTCTTGA+TGG + chr8_1:62109368-62109387 Msa1205680:CDS 35.0%
CAGAAGAGTTAACTCTTGAT+GGG + chr8_1:62109369-62109388 Msa1205680:CDS 35.0%
!!! TGATCATAGTTTTGTGATCG+CGG + chr8_1:62109623-62109642 Msa1205680:intron 35.0%
! CATTTTTATGAGTCCATGTG+TGG + chr8_1:62109859-62109878 Msa1205680:intron 35.0%
!! AGATGAATTTTGAGTGTGCA+CGG + chr8_1:62110183-62110202 Msa1205680:intron 35.0%
CAAGGTTCTTGAATCTTCTA+CGG - chr8_1:62110277-62110296 None:intergenic 35.0%
TATGCAATGCAATTAATCGG+TGG + chr8_1:62110313-62110332 Msa1205680:intron 35.0%
CTGAATCCTTATAAAACGAC+AGG + chr8_1:62110649-62110668 Msa1205680:intron 35.0%
ATAAGCCACAATCTCATGTA+AGG + chr8_1:62111043-62111062 Msa1205680:intron 35.0%
GGTTAAGAATATGGTAGGTT+AGG + chr8_1:62111086-62111105 Msa1205680:intron 35.0%
GGTTAGGATAGACTTTAGTA+AGG + chr8_1:62111102-62111121 Msa1205680:intron 35.0%
!! GTCTCGAGAGTATTTACAAT+TGG - chr8_1:62111736-62111755 None:intergenic 35.0%
!! TAGTTCTGGACCTAACTAAT+AGG - chr8_1:62111779-62111798 None:intergenic 35.0%
GTCCAGAACTAAGATATCAA+AGG + chr8_1:62111788-62111807 Msa1205680:intron 35.0%
CACCTTTGATATCTTAGTTC+TGG - chr8_1:62111793-62111812 None:intergenic 35.0%
AAAGGTGAAGGACAGTTTAA+AGG + chr8_1:62111806-62111825 Msa1205680:intron 35.0%
AACGTATCAGAGTCATACAT+AGG + chr8_1:62111840-62111859 Msa1205680:intron 35.0%
AAAAAGTTCATAGGTGTTCG+TGG + chr8_1:62112291-62112310 Msa1205680:intron 35.0%
AAAAGTTCATAGGTGTTCGT+GGG + chr8_1:62112292-62112311 Msa1205680:intron 35.0%
TTTAATCTACCAGTGAACCA+AGG + chr8_1:62112476-62112495 Msa1205680:intron 35.0%
GTTTACATCTTCTCTCTTGT+TGG + chr8_1:62112614-62112633 Msa1205680:CDS 35.0%
TTCCCCAATAAGAATCACTT+AGG - chr8_1:62112646-62112665 None:intergenic 35.0%
CAAAGCAAGGTATGTTGTAA+CGG - chr8_1:62112825-62112844 None:intergenic 35.0%
! TTTCCATTTCCACAACCTTT+TGG - chr8_1:62112854-62112873 None:intergenic 35.0%
GGAAATGGAAAACTTGAATG+TGG + chr8_1:62112863-62112882 Msa1205680:CDS 35.0%
! GGAACATTCAAGTTTGGAAA+TGG + chr8_1:62112886-62112905 Msa1205680:CDS 35.0%
AGGCTATCAGATAGATTGAT+AGG - chr8_1:62112922-62112941 None:intergenic 35.0%
TCAATCTATCTGATAGCCTT+AGG + chr8_1:62112923-62112942 Msa1205680:CDS 35.0%
! TATCTGATAGCCTTAGGAAA+TGG + chr8_1:62112929-62112948 Msa1205680:CDS 35.0%
TTGATATCCTCCATTTCCTA+AGG - chr8_1:62112942-62112961 None:intergenic 35.0%
CAACCAAACATTGCAACATT+TGG + chr8_1:62112959-62112978 Msa1205680:CDS 35.0%
TTGAGTGATCCTCATCAAAT+TGG - chr8_1:62112991-62113010 None:intergenic 35.0%
ATTTGATGAGGATCACTCAA+AGG + chr8_1:62112991-62113010 Msa1205680:CDS 35.0%
!! TTTTACTTGGCATTGAACCT+TGG + chr8_1:62113046-62113065 Msa1205680:CDS 35.0%
TGTTTGAGAAAAGTGAACCA+AGG - chr8_1:62113066-62113085 None:intergenic 35.0%
!! TTGGGCTATTTTGAAGATGA+AGG + chr8_1:62113091-62113110 Msa1205680:CDS 35.0%
! AAAAAGTACAAGGGCCAAAA+AGG - chr8_1:62113155-62113174 None:intergenic 35.0%
! GCCAACAAGAAAAAGTACAA+GGG - chr8_1:62113164-62113183 None:intergenic 35.0%
! TGCCAACAAGAAAAAGTACA+AGG - chr8_1:62113165-62113184 None:intergenic 35.0%
TTGAAGCAGCAAAAAACACT+TGG - chr8_1:62113240-62113259 None:intergenic 35.0%
!!! AAGTGTTTTTTGCTGCTTCA+AGG + chr8_1:62113239-62113258 Msa1205680:CDS 35.0%
! TTTGCTGCTTCAAGGAAATT+AGG + chr8_1:62113247-62113266 Msa1205680:CDS 35.0%
GGAGTTCAAATGACATCAAA+TGG + chr8_1:62113268-62113287 Msa1205680:CDS 35.0%
CTTGTATGTCACAGATGAAA+AGG + chr8_1:62113297-62113316 Msa1205680:CDS 35.0%
GTTTACACTTCATAACTCTG+AGG + chr8_1:62113404-62113423 Msa1205680:intron 35.0%
! CGACATAATGGTTTTTGATG+TGG - chr8_1:62113627-62113646 None:intergenic 35.0%
CATCAAAAACCATTATGTCG+TGG + chr8_1:62113627-62113646 Msa1205680:intron 35.0%
AGAGATTTAGAGGTCCAAAA+AGG + chr8_1:62113875-62113894 Msa1205680:CDS 35.0%
! AAAGATACCATGGGTTATGT+TGG - chr8_1:62113904-62113923 None:intergenic 35.0%
GTAATAGGACAAAGATACCA+TGG - chr8_1:62113914-62113933 None:intergenic 35.0%
! CTCAGTAGTTTTCACTCAAA+TGG + chr8_1:62113997-62114016 Msa1205680:CDS 35.0%
! TCAAATGGCTTCTCTTTTTG+TGG + chr8_1:62114012-62114031 Msa1205680:CDS 35.0%
! GGAAATAGTGGTTTTCATTG+CGG - chr8_1:62114047-62114066 None:intergenic 35.0%
ACGGTAGAAGAAAATGAAGA+TGG - chr8_1:62114122-62114141 None:intergenic 35.0%
!!! TTTTTGAGTTTTCCGACAAG+TGG - chr8_1:62114157-62114176 None:intergenic 35.0%
ACTCACTGAACTTCAAAGAA+TGG + chr8_1:62114192-62114211 Msa1205680:CDS 35.0%
CTCACTGAACTTCAAAGAAT+GGG + chr8_1:62114193-62114212 Msa1205680:CDS 35.0%
GAACTTCAAAGAATGGGAAT+CGG + chr8_1:62114199-62114218 Msa1205680:CDS 35.0%
CGTTATAGCTATAATCGCAA+TGG + chr8_1:62114225-62114244 Msa1205680:CDS 35.0%
! CTGGAATAGTGGAATGTTAT+AGG + chr8_1:62114254-62114273 Msa1205680:CDS 35.0%
AGGCTTAAGTATGCAAAACA+AGG + chr8_1:62114274-62114293 Msa1205680:CDS 35.0%
ATTCCTCAGTATGCACTTAT+AGG + chr8_1:62114328-62114347 Msa1205680:CDS 35.0%
AAACTTGAATAGAGGTCACT+TGG + chr8_1:62114540-62114559 Msa1205680:CDS 35.0%
! GGATAGGTTTTTCTTCCTAT+TGG + chr8_1:62114561-62114580 Msa1205680:CDS 35.0%
AAGAAGTCAAAACAGCCAAT+AGG - chr8_1:62114579-62114598 None:intergenic 35.0%
CTTATATTGCATGTGCAAAG+TGG + chr8_1:62114611-62114630 Msa1205680:CDS 35.0%
GTGGTTTCAGAATATTCAGA+TGG + chr8_1:62114630-62114649 Msa1205680:CDS 35.0%
GATTATACTTTGCAGCTACT+AGG - chr8_1:62114682-62114701 None:intergenic 35.0%
GAATACAGTTAAAGAGACTC+AGG - chr8_1:62114812-62114831 None:intergenic 35.0%
GAAATTCATGGTTGTATCCA+TGG + chr8_1:62114877-62114896 Msa1205680:three_prime_UTR 35.0%
GTAAGTTCCATTGCTAATGA+TGG + chr8_1:62114982-62115001 Msa1205680:three_prime_UTR 35.0%
AACATGTCCATCATTAGCAA+TGG - chr8_1:62114992-62115011 None:intergenic 35.0%
TTTGGTGAGTTCCAATAGGA+TGG - chr8_1:62109139-62109158 None:intergenic 40.0%
!! GGTCACAACTAGTGTTACTT+AGG + chr8_1:62109948-62109967 Msa1205680:intron 40.0%
!! GATGAATTTTGAGTGTGCAC+GGG + chr8_1:62110184-62110203 Msa1205680:intron 40.0%
!! ATGAATTTTGAGTGTGCACG+GGG + chr8_1:62110185-62110204 Msa1205680:intron 40.0%
TGATTCTTACTCGACCGTTT+CGG + chr8_1:62110571-62110590 Msa1205680:intron 40.0%
!!! CTGTCTCCTGTCGTTTTATA+AGG - chr8_1:62110658-62110677 None:intergenic 40.0%
AACGACAGGAGACAGAAAAT+AGG + chr8_1:62110663-62110682 Msa1205680:intron 40.0%
CATGTATGCATCATAACACG+TGG - chr8_1:62110806-62110825 None:intergenic 40.0%
TACTTATGGACATGAGTGCA+AGG + chr8_1:62110842-62110861 Msa1205680:intron 40.0%
!! ACTAGCCTTACATGAGATTG+TGG - chr8_1:62111051-62111070 None:intergenic 40.0%
ATCTCATGTAAGGCTAGTGA+AGG + chr8_1:62111053-62111072 Msa1205680:intron 40.0%
CTAACAAATCACCACTTGAG+TGG - chr8_1:62111305-62111324 None:intergenic 40.0%
!!! AGATTTTTTGGTGGTGGTCA+TGG + chr8_1:62111399-62111418 Msa1205680:intron 40.0%
TCAACTGAGTTAAGCTCACA+AGG + chr8_1:62111462-62111481 Msa1205680:intron 40.0%
! TTTTCTTTGCACACGCGAAA+AGG - chr8_1:62111880-62111899 None:intergenic 40.0%
TACATACATGTGCTCAAGTG+CGG + chr8_1:62111930-62111949 Msa1205680:intron 40.0%
CTAGCAACCTTAGCATTCTT+TGG + chr8_1:62112500-62112519 Msa1205680:CDS 40.0%
!! ACCTTAGCATTCTTTGGAGT+TGG + chr8_1:62112506-62112525 Msa1205680:CDS 40.0%
TCCAACTCCAAAGAATGCTA+AGG - chr8_1:62112510-62112529 None:intergenic 40.0%
CTGCTAACAATGTTAGCAAG+TGG + chr8_1:62112582-62112601 Msa1205680:CDS 40.0%
AACAATGTTAGCAAGTGGAC+TGG + chr8_1:62112587-62112606 Msa1205680:CDS 40.0%
AGACCAAAAGGTTGTGGAAA+TGG + chr8_1:62112848-62112867 Msa1205680:CDS 40.0%
! ATGTGGGGAACATTCAAGTT+TGG + chr8_1:62112880-62112899 Msa1205680:CDS 40.0%
GCACCAAATGTTGCAATGTT+TGG - chr8_1:62112965-62112984 None:intergenic 40.0%
ATGAAGGATTATGGGCTCTT+GGG + chr8_1:62113107-62113126 Msa1205680:CDS 40.0%
! ATTATGGGCTCTTGGGTTTT+GGG + chr8_1:62113114-62113133 Msa1205680:CDS 40.0%
!!! GCCCTTGTACTTTTTCTTGT+TGG + chr8_1:62113160-62113179 Msa1205680:CDS 40.0%
ACTTGGCAGAATCTTGAAAG+AGG - chr8_1:62113223-62113242 None:intergenic 40.0%
TGTGTGGAGAATCTTTCTGT+TGG - chr8_1:62113338-62113357 None:intergenic 40.0%
AGAAAGATTCTCCACACACA+CGG + chr8_1:62113340-62113359 Msa1205680:CDS 40.0%
CCACATTTGAAAGGGACTTT+CGG - chr8_1:62113577-62113596 None:intergenic 40.0%
CAATCTTGACCACGACATAA+TGG - chr8_1:62113639-62113658 None:intergenic 40.0%
TTATGTCGTGGTCAAGATTG+TGG + chr8_1:62113639-62113658 Msa1205680:intron 40.0%
CTTCGGAAAATAATGAGACG+TGG + chr8_1:62113711-62113730 Msa1205680:intron 40.0%
GATTTAGAGGTCCAAAAAGG+AGG + chr8_1:62113878-62113897 Msa1205680:CDS 40.0%
!!! TGCTGGTGGTATTTTGAAAC+TGG - chr8_1:62114068-62114087 None:intergenic 40.0%
ATAATCGCAATGGTTACAGC+TGG + chr8_1:62114235-62114254 Msa1205680:CDS 40.0%
AATGGTTACAGCTGGAATAG+TGG + chr8_1:62114243-62114262 Msa1205680:CDS 40.0%
CAAGCTCTCTAAGTATCTTC+TGG + chr8_1:62114302-62114321 Msa1205680:CDS 40.0%
TTCAATGCTCAAACACCTGA+TGG + chr8_1:62114391-62114410 Msa1205680:CDS 40.0%
TGCATGACAAGTATCTCACT+TGG + chr8_1:62114439-62114458 Msa1205680:CDS 40.0%
GCATGACAAGTATCTCACTT+GGG + chr8_1:62114440-62114459 Msa1205680:CDS 40.0%
ATCCCTGGAAACTTGAATAG+AGG + chr8_1:62114532-62114551 Msa1205680:CDS 40.0%
! GACCTCTATTCAAGTTTCCA+GGG - chr8_1:62114537-62114556 None:intergenic 40.0%
! TGACCTCTATTCAAGTTTCC+AGG - chr8_1:62114538-62114557 None:intergenic 40.0%
TGAATAGAGGTCACTTGGAT+AGG + chr8_1:62114545-62114564 Msa1205680:CDS 40.0%
!!! ATAGTTTTAGGGCCTCTCTT+GGG + chr8_1:62114932-62114951 Msa1205680:three_prime_UTR 40.0%
TTGGATGAAAGCCGAAGACA+AGG - chr8_1:62108913-62108932 None:intergenic 45.0%
!! ATCACCAATGGCTTGCTTAG+AGG + chr8_1:62109006-62109025 Msa1205680:CDS 45.0%
TTGCTTAGAGGTCTGCAAAG+AGG + chr8_1:62109018-62109037 Msa1205680:CDS 45.0%
!! CTCTTGATGGGAGTGTTGAT+TGG + chr8_1:62109381-62109400 Msa1205680:CDS 45.0%
!! CAGATTTGGCTCTGTTTGCT+GGG - chr8_1:62109415-62109434 None:intergenic 45.0%
CAGCAAACAGAGCCAAATCT+GGG + chr8_1:62109414-62109433 Msa1205680:CDS 45.0%
AGCAAACCATCTCCCAGATT+TGG - chr8_1:62109429-62109448 None:intergenic 45.0%
! AAATCTGGGAGATGGTTTGC+TGG + chr8_1:62109428-62109447 Msa1205680:CDS 45.0%
!! TGAATTTTGAGTGTGCACGG+GGG + chr8_1:62110186-62110205 Msa1205680:intron 45.0%
GCTAGTGAAGGTCACCAATA+AGG + chr8_1:62111065-62111084 Msa1205680:intron 45.0%
TAAGCTTTGCACCACTCAAG+TGG + chr8_1:62111291-62111310 Msa1205680:intron 45.0%
TTTGCACACGCGAAAAGGTT+CGG - chr8_1:62111875-62111894 None:intergenic 45.0%
ATGCTAAGGTTGCTAGACCT+TGG - chr8_1:62112496-62112515 None:intergenic 45.0%
!! ACCTAGTTCTGTTCCTGACA+AGG + chr8_1:62112534-62112553 Msa1205680:CDS 45.0%
!! CCTAGTTCTGTTCCTGACAA+GGG + chr8_1:62112535-62112554 Msa1205680:CDS 45.0%
! CTGATAGCCTTAGGAAATGG+AGG + chr8_1:62112932-62112951 Msa1205680:CDS 45.0%
!! TGGTGCTGACCAATTTGATG+AGG + chr8_1:62112979-62112998 Msa1205680:CDS 45.0%
GATGAAGGATTATGGGCTCT+TGG + chr8_1:62113106-62113125 Msa1205680:CDS 45.0%
! GATTATGGGCTCTTGGGTTT+TGG + chr8_1:62113113-62113132 Msa1205680:CDS 45.0%
CTTGAAAGAGGATTGCCACA+AGG - chr8_1:62113211-62113230 None:intergenic 45.0%
CCGAAAGTCCCTTTCAAATG+TGG + chr8_1:62113574-62113593 Msa1205680:intron 45.0%
CTCATCGGCCACATTTGAAA+GGG - chr8_1:62113585-62113604 None:intergenic 45.0%
AACCACAATGTAGGCCTCAT+CGG - chr8_1:62113600-62113619 None:intergenic 45.0%
ATGAGGCCTACATTGTGGTT+TGG + chr8_1:62113600-62113619 Msa1205680:intron 45.0%
TGTGGTCCAAACCACAATGT+AGG - chr8_1:62113609-62113628 None:intergenic 45.0%
!! GGTTATGTTGGCCTCCTTTT+TGG - chr8_1:62113892-62113911 None:intergenic 45.0%
! GCTTCTCTTTTTGTGGAGCA+AGG + chr8_1:62114019-62114038 Msa1205680:CDS 45.0%
AAATGAAGATGGCTACGCTG+AGG - chr8_1:62114111-62114130 None:intergenic 45.0%
CAAGTGGATCAAGTACTCGA+CGG - chr8_1:62114141-62114160 None:intergenic 45.0%
CGAGTACTTGATCCACTTGT+CGG + chr8_1:62114142-62114161 Msa1205680:CDS 45.0%
TTGAAGTTCAGTGAGTCCCT+TGG - chr8_1:62114188-62114207 None:intergenic 45.0%
GCTCCTATAAGTGCATACTG+AGG - chr8_1:62114334-62114353 None:intergenic 45.0%
TGCACTTATAGGAGCTTCTG+AGG + chr8_1:62114339-62114358 Msa1205680:CDS 45.0%
CCAAAGCTCTTCAATCCATC+AGG - chr8_1:62114409-62114428 None:intergenic 45.0%
!! CCTGATGGATTGAAGAGCTT+TGG + chr8_1:62114406-62114425 Msa1205680:CDS 45.0%
TCAACTGAAGATCACATGCC+AGG + chr8_1:62114505-62114524 Msa1205680:CDS 45.0%
!!! GATAGTTTTAGGGCCTCTCT+TGG + chr8_1:62114931-62114950 Msa1205680:three_prime_UTR 45.0%
!! TTATAATATTAAAATGTTTA+TGG + chr8_1:62111541-62111560 Msa1205680:intron 5.0%
!! TATAATATTAAAATGTTTAT+GGG + chr8_1:62111542-62111561 Msa1205680:intron 5.0%
!! TTATAAAAACAAATAAATTT+AGG + chr8_1:62111963-62111982 Msa1205680:intron 5.0%
!! AAAAAAAAAAAAATAATGTA+TGG + chr8_1:62112345-62112364 Msa1205680:intron 5.0%
CAGACCTCTAAGCAAGCCAT+TGG - chr8_1:62109013-62109032 None:intergenic 50.0%
!! GATGGGAGTGTTGATTGGCA+TGG + chr8_1:62109386-62109405 Msa1205680:CDS 50.0%
!! CCAGATTTGGCTCTGTTTGC+TGG - chr8_1:62109416-62109435 None:intergenic 50.0%
CCAGCAAACAGAGCCAAATC+TGG + chr8_1:62109413-62109432 Msa1205680:CDS 50.0%
ACAGAGCCAAATCTGGGAGA+TGG + chr8_1:62109420-62109439 Msa1205680:CDS 50.0%
GGACACACTTATGCCACACA+TGG - chr8_1:62109875-62109894 None:intergenic 50.0%
CGTGGCAAATACCTACGTCA+TGG - chr8_1:62110788-62110807 None:intergenic 50.0%
CAATTGGTCGATACGGCCAA+AGG - chr8_1:62111720-62111739 None:intergenic 50.0%
GTTGCTAGACCTTGGTTCAC+TGG - chr8_1:62112488-62112507 None:intergenic 50.0%
CCCTTGTCAGGAACAGAACT+AGG - chr8_1:62112538-62112557 None:intergenic 50.0%
! TCTGTTCCTGACAAGGGTGT+TGG + chr8_1:62112541-62112560 Msa1205680:CDS 50.0%
!! CTGTTCCTGACAAGGGTGTT+GGG + chr8_1:62112542-62112561 Msa1205680:CDS 50.0%
!!! TTGGGTTTTGGGCTTCTGCT+GGG + chr8_1:62113125-62113144 Msa1205680:CDS 50.0%
! TTCTGCTGGGTCTGCCTTTT+TGG + chr8_1:62113138-62113157 Msa1205680:CDS 50.0%
CTTACTTGAAGCCGTGTGTG+TGG - chr8_1:62113354-62113373 None:intergenic 50.0%
CCTCATCGGCCACATTTGAA+AGG - chr8_1:62113586-62113605 None:intergenic 50.0%
CCTTTCAAATGTGGCCGATG+AGG + chr8_1:62113583-62113602 Msa1205680:intron 50.0%
AAGGAGGCCAACATAACCCA+TGG + chr8_1:62113894-62113913 Msa1205680:CDS 50.0%
! AAGCTAGACATGCTTGCTGG+TGG - chr8_1:62114082-62114101 None:intergenic 50.0%
TCGAAGCTAGACATGCTTGC+TGG - chr8_1:62114085-62114104 None:intergenic 50.0%
CTGAAGATCACATGCCAGGA+TGG + chr8_1:62114509-62114528 Msa1205680:CDS 50.0%
AAGTTTCCAGGGATCCATCC+TGG - chr8_1:62114526-62114545 None:intergenic 50.0%
GAACAAGGAAGACCCAAGAG+AGG - chr8_1:62114947-62114966 None:intergenic 50.0%
CTTGACCCAACACCCTTGTC+AGG - chr8_1:62112550-62112569 None:intergenic 55.0%
!!! CTTGGGTTTTGGGCTTCTGC+TGG + chr8_1:62113124-62113143 Msa1205680:CDS 55.0%
GGCCGATGAGGCCTACATTG+TGG + chr8_1:62113595-62113614 Msa1205680:intron 60.0%
CACATGCCAGGATGGATCCC+TGG + chr8_1:62114517-62114536 Msa1205680:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 62108845 62115052 62108845 ID=Msa1205680;Name=Msa1205680
chr8_1 mRNA 62108845 62115052 62108845 ID=Msa1205680-mRNA-1;Parent=Msa1205680;Name=Msa1205680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.8|1|1|1|5|353|648
chr8_1 exon 62108845 62109039 62108845 ID=Msa1205680-mRNA-1:exon:20139;Parent=Msa1205680-mRNA-1
chr8_1 exon 62109350 62109464 62109350 ID=Msa1205680-mRNA-1:exon:20140;Parent=Msa1205680-mRNA-1
chr8_1 exon 62112489 62112706 62112489 ID=Msa1205680-mRNA-1:exon:20141;Parent=Msa1205680-mRNA-1
chr8_1 exon 62112806 62113368 62112806 ID=Msa1205680-mRNA-1:exon:20142;Parent=Msa1205680-mRNA-1
chr8_1 exon 62113844 62115052 62113844 ID=Msa1205680-mRNA-1:exon:20143;Parent=Msa1205680-mRNA-1
chr8_1 CDS 62108845 62109039 62108845 ID=Msa1205680-mRNA-1:cds;Parent=Msa1205680-mRNA-1
chr8_1 CDS 62109350 62109464 62109350 ID=Msa1205680-mRNA-1:cds;Parent=Msa1205680-mRNA-1
chr8_1 CDS 62112489 62112706 62112489 ID=Msa1205680-mRNA-1:cds;Parent=Msa1205680-mRNA-1
chr8_1 CDS 62112806 62113368 62112806 ID=Msa1205680-mRNA-1:cds;Parent=Msa1205680-mRNA-1
chr8_1 CDS 62113844 62114699 62113844 ID=Msa1205680-mRNA-1:cds;Parent=Msa1205680-mRNA-1
chr8_1 three_prime_UTR 62114700 62115052 62114700 ID=Msa1205680-mRNA-1:three_prime_utr;Parent=Msa1205680-mRNA-1
Gene Sequence

>Msa1205680

ATGCGATTCTTTATTCCTCTATATATAGTGAATACTTCCACACACTCTGTTTCATCATTAAATCTCCTTGTCTTCGGCTTTCATCCAAATCAACAACAATCTTCCTCTGTTTCATCATTTTTCTCACTCTTTTTCTTCCTTTTTGTCTTTGAAACTTTGACATCACCAATGGCTTGCTTAGAGGTCTGCAAAGAGGGGAAGTTCAAAGAAGAAACAGAAGAGTTAACTCTTGATGGGAGTGTTGATTGGCATGGTCGCCCAGCAAACAGAGCCAAATCTGGGAGATGGTTTGCTGGAACTATTATACTCTTGAACCAAGGTCTAGCAACCTTAGCATTCTTTGGAGTTGGAGTGAACCTAGTTCTGTTCCTGACAAGGGTGTTGGGTCAAGACAATGCTGCTGCTGCTAACAATGTTAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTTGGTGCTTTCCTAAGTGATTCTTATTGGGGAAGATACAAAACATGTGCTATCTTTCAAGGCATTTTTGTAACTGGTCTAGTATCTTTGTCCGTTACAACATACCTTGCTTTGCTTAGACCAAAAGGTTGTGGAAATGGAAAACTTGAATGTGGGGAACATTCAAGTTTGGAAATGGGAATGTTCTACCTATCAATCTATCTGATAGCCTTAGGAAATGGAGGATATCAACCAAACATTGCAACATTTGGTGCTGACCAATTTGATGAGGATCACTCAAAGGAGAGTTATTCAAAAGTGGCATTTTTTAGCTACTTTTACTTGGCATTGAACCTTGGTTCACTTTTCTCAAACACTATTTTGGGCTATTTTGAAGATGAAGGATTATGGGCTCTTGGGTTTTGGGCTTCTGCTGGGTCTGCCTTTTTGGCCCTTGTACTTTTTCTTGTTGGCACCCCAAAATATAGACACTTTAAACCTTGTGGCAATCCTCTTTCAAGATTCTGCCAAGTGTTTTTTGCTGCTTCAAGGAAATTAGGAGTTCAAATGACATCAAATGGAGATGACTTGTATGTCACAGATGAAAAGGAATCTTCTAACAACTCCAACAGAAAGATTCTCCACACACACGGCTTCAAGTTTTTGGATAGGGCAGCTTATATAACTTCAAGAGATTTAGAGGTCCAAAAAGGAGGCCAACATAACCCATGGTATCTTTGTCCTATTACTCAAGTTGAAGAAGTAAAATGCATACTAAGACTTCTTCCAATTTGGCTTTGCACAATAATCTACTCAGTAGTTTTCACTCAAATGGCTTCTCTTTTTGTGGAGCAAGGCGCCGCAATGAAAACCACTATTTCCAGTTTCAAAATACCACCAGCAAGCATGTCTAGCTTCGACATCCTCAGCGTAGCCATCTTCATTTTCTTCTACCGTCGAGTACTTGATCCACTTGTCGGAAAACTCAAAAAAACAAGTTCCAAGGGACTCACTGAACTTCAAAGAATGGGAATCGGTCTCGTTATAGCTATAATCGCAATGGTTACAGCTGGAATAGTGGAATGTTATAGGCTTAAGTATGCAAAACAAGGTGACGCAAGCTCTCTAAGTATCTTCTGGCAAATTCCTCAGTATGCACTTATAGGAGCTTCTGAGGTTTTTATGTATGTAGGACAATTAGAATTCTTCAATGCTCAAACACCTGATGGATTGAAGAGCTTTGGAAGTGCACTTTGCATGACAAGTATCTCACTTGGGAACTATGTGAGTAGCTTAATTGTTAGTATTGTTATGAAGATTTCAACTGAAGATCACATGCCAGGATGGATCCCTGGAAACTTGAATAGAGGTCACTTGGATAGGTTTTTCTTCCTATTGGCTGTTTTGACTTCTTTAGATTTGATTGCTTATATTGCATGTGCAAAGTGGTTTCAGAATATTCAGATGGAATGCAAATATGATAACAATGATGAGCCTAGTAGCTGCAAAGTATAA
Protein sequence

>Msa1205680

MRFFIPLYIVNTSTHSVSSLNLLVFGFHPNQQQSSSVSSFFSLFFFLFVFETLTSPMACLEVCKEGKFKEETEELTLDGSVDWHGRPANRAKSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLVSLSVTTYLALLRPKGCGNGKLECGEHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEDHSKESYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFLALVLFLVGTPKYRHFKPCGNPLSRFCQVFFAASRKLGVQMTSNGDDLYVTDEKESSNNSNRKILHTHGFKFLDRAAYITSRDLEVQKGGQHNPWYLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISSFKIPPASMSSFDILSVAIFIFFYRRVLDPLVGKLKKTSSKGLTELQRMGIGLVIAIIAMVTAGIVECYRLKYAKQGDASSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFFFLLAVLTSLDLIAYIACAKWFQNIQMECKYDNNDEPSSCKV*