AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297750 MtrunA17_Chr4g0054891 98.611 648 9 0 1 648 21 668 0.0 1318
Msa1297750 MtrunA17_Chr5g0400371 80.165 605 107 3 57 648 71 675 0.0 983
Msa1297750 MtrunA17_Chr7g0217461 70.840 583 155 5 69 642 3 579 0.0 816
Msa1297750 MtrunA17_Chr1g0213711 58.711 574 225 8 73 645 9 571 0.0 663
Msa1297750 MtrunA17_Chr7g0214461 59.246 557 220 4 84 639 72 622 0.0 659
Msa1297750 MtrunA17_Chr7g0218851 59.227 569 214 7 84 642 40 600 0.0 648
Msa1297750 MtrunA17_Chr4g0011471 53.947 532 239 3 104 631 30 559 0.0 566
Msa1297750 MtrunA17_Chr4g0011041 48.592 568 286 4 69 631 15 581 0.0 530
Msa1297750 MtrunA17_Chr8g0375311 43.915 567 307 4 70 630 20 581 3.83e-167 490
Msa1297750 MtrunA17_Chr8g0375291 44.128 562 303 4 70 625 20 576 3.72e-164 483
Msa1297750 MtrunA17_Chr8g0375341 42.681 567 314 4 70 630 20 581 6.39e-161 474
Msa1297750 MtrunA17_Chr3g0104011 44.346 566 301 7 70 628 2 560 2.38e-159 470
Msa1297750 MtrunA17_Chr8g0375351 42.328 567 316 4 70 630 20 581 2.25e-158 468
Msa1297750 MtrunA17_Chr4g0005901 43.182 572 311 6 61 626 3 566 1.75e-156 462
Msa1297750 MtrunA17_Chr7g0241741 43.009 565 308 6 71 629 3 559 2.80e-155 459
Msa1297750 MtrunA17_Chr8g0375321 42.124 565 316 4 71 629 18 577 7.77e-155 459
Msa1297750 MtrunA17_Chr8g0375331 42.077 568 316 6 70 629 2 564 2.02e-150 447
Msa1297750 MtrunA17_Chr7g0261811 37.543 586 345 6 73 647 10 585 3.09e-142 427
Msa1297750 MtrunA17_Chr7g0261771 37.889 578 340 5 60 628 1 568 4.21e-141 424
Msa1297750 MtrunA17_Chr8g0375361 41.126 586 332 5 51 630 2 580 3.95e-140 421
Msa1297750 MtrunA17_Chr7g0261881 36.177 586 353 6 73 647 10 585 1.27e-139 420
Msa1297750 MtrunA17_Chr3g0142101 37.311 595 356 9 57 647 1 582 7.00e-134 405
Msa1297750 MtrunA17_Chr1g0187241 37.057 564 334 6 64 618 2 553 1.53e-132 402
Msa1297750 MtrunA17_Chr1g0166791 36.332 567 344 5 70 628 4 561 4.35e-129 393
Msa1297750 MtrunA17_Chr5g0399061 39.153 567 327 9 73 628 10 569 8.04e-129 392
Msa1297750 MtrunA17_Chr7g0261791 37.566 567 332 7 73 628 12 567 1.46e-128 392
Msa1297750 MtrunA17_Chr5g0399071 36.731 569 340 7 72 628 7 567 7.78e-126 384
Msa1297750 MtrunA17_Chr3g0142091 36.021 583 359 7 69 647 3 575 2.08e-124 380
Msa1297750 MtrunA17_Chr7g0261851 37.370 578 340 6 60 628 1 565 2.48e-123 378
Msa1297750 MtrunA17_Chr1g0166711 36.299 562 342 4 74 628 9 561 4.34e-123 377
Msa1297750 MtrunA17_Chr3g0112671 36.007 586 350 12 64 639 6 576 2.08e-122 375
Msa1297750 MtrunA17_Chr1g0166741 35.370 540 339 4 74 612 11 541 2.86e-119 367
Msa1297750 MtrunA17_Chr4g0063591 37.919 567 334 9 70 629 2 557 2.53e-117 362
Msa1297750 MtrunA17_Chr7g0240381 35.103 584 355 12 69 647 7 571 9.69e-117 360
Msa1297750 MtrunA17_Chr4g0056431 36.380 569 347 8 71 628 6 570 6.68e-115 356
Msa1297750 MtrunA17_Chr1g0166771 36.111 504 312 4 111 613 12 506 1.91e-113 351
Msa1297750 MtrunA17_Chr3g0114501 35.651 561 343 8 70 622 2 552 1.06e-112 350
Msa1297750 MtrunA17_Chr5g0422881 34.912 570 354 7 90 648 20 583 2.74e-111 347
Msa1297750 MtrunA17_Chr4g0008651 33.048 584 374 10 64 641 9 581 2.87e-109 342
Msa1297750 MtrunA17_Chr3g0077151 37.143 560 298 14 76 621 14 533 3.57e-109 340
Msa1297750 MtrunA17_Chr5g0439381 35.417 576 350 8 69 641 10 566 1.51e-106 334
Msa1297750 MtrunA17_Chr3g0112611 33.167 600 370 14 60 642 1 586 4.35e-106 333
Msa1297750 MtrunA17_Chr4g0014791 35.512 566 324 11 71 626 10 544 2.69e-105 330
Msa1297750 MtrunA17_Chr4g0014871 34.643 560 328 11 77 626 17 548 3.61e-104 327
Msa1297750 MtrunA17_Chr4g0059991 32.373 590 381 5 70 648 5 587 6.19e-104 328
Msa1297750 MtrunA17_Chr7g0261751 37.166 487 275 7 60 516 1 486 1.14e-103 325
Msa1297750 MtrunA17_Chr4g0014841 36.042 566 321 10 71 626 10 544 2.39e-103 325
Msa1297750 MtrunA17_Chr4g0014801 35.366 574 325 12 70 626 2 546 8.41e-103 323
Msa1297750 MtrunA17_Chr7g0261661 37.609 460 266 6 178 628 3 450 3.64e-102 320
Msa1297750 MtrunA17_Chr2g0276751 34.513 565 342 9 70 628 18 560 2.56e-101 321
Msa1297750 MtrunA17_Chr8g0353031 34.331 568 334 10 92 644 20 563 2.66e-101 320
Msa1297750 MtrunA17_Chr7g0255601 33.512 561 358 9 77 628 14 568 9.25e-99 315
Msa1297750 MtrunA17_Chr4g0014781 34.859 568 327 13 71 626 10 546 4.99e-98 311
Msa1297750 MtrunA17_Chr7g0214731 32.581 620 374 14 55 639 16 626 7.04e-98 313
Msa1297750 MtrunA17_Chr7g0255621 31.434 579 382 8 73 642 3 575 9.23e-98 312
Msa1297750 MtrunA17_Chr4g0059981 32.609 552 355 6 96 634 37 584 2.50e-97 311
Msa1297750 MtrunA17_Chr8g0362711 33.333 561 364 5 70 622 4 562 5.65e-97 309
Msa1297750 MtrunA17_Chr2g0284701 31.779 579 375 10 69 629 10 586 7.24e-97 309
Msa1297750 MtrunA17_Chr5g0415791 32.240 549 361 6 90 629 29 575 2.00e-95 306
Msa1297750 MtrunA17_Chr4g0059971 30.277 578 389 5 64 629 7 582 4.33e-95 305
Msa1297750 MtrunA17_Chr1g0193391 31.453 585 362 11 69 647 4 555 1.96e-94 303
Msa1297750 MtrunA17_Chr8g0362781 30.944 572 375 7 70 629 16 579 6.94e-94 301
Msa1297750 MtrunA17_Chr7g0271221 31.670 581 362 11 69 645 4 553 3.89e-93 299
Msa1297750 MtrunA17_Chr1g0166731 36.601 459 275 4 177 628 9 458 3.98e-93 296
Msa1297750 MtrunA17_Chr7g0255611 31.834 578 377 10 60 628 1 570 4.71e-93 299
Msa1297750 MtrunA17_Chr5g0415961 32.574 571 354 9 78 629 12 570 3.68e-92 296
Msa1297750 MtrunA17_Chr8g0379971 32.264 561 348 8 73 602 3 562 6.64e-90 291
Msa1297750 MtrunA17_Chr3g0133341 30.756 569 365 8 86 641 10 562 2.62e-89 288
Msa1297750 MtrunA17_Chr4g0069581 33.333 525 334 7 108 629 4 515 1.17e-87 284
Msa1297750 MtrunA17_Chr7g0261731 39.665 358 203 4 60 414 1 348 5.07e-87 276
Msa1297750 MtrunA17_Chr3g0082631 35.335 433 258 7 212 628 30 456 1.62e-85 276
Msa1297750 MtrunA17_Chr4g0014861 35.748 428 248 9 209 626 13 423 4.78e-82 265
Msa1297750 MtrunA17_Chr8g0362801 32.017 481 310 9 178 648 1 474 8.46e-79 258
Msa1297750 MtrunA17_Chr4g0060001 29.947 571 385 8 64 624 2 567 2.22e-78 261
Msa1297750 MtrunA17_Chr1g0157601 29.304 546 360 9 102 636 27 557 4.48e-78 259
Msa1297750 MtrunA17_Chr1g0157611 30.142 564 366 9 90 641 16 563 5.61e-77 256
Msa1297750 MtrunA17_Chr8g0390331 29.834 543 363 9 92 625 17 550 5.09e-76 254
Msa1297750 MtrunA17_Chr1g0157621 29.650 543 353 10 111 641 1 526 9.56e-76 253
Msa1297750 MtrunA17_Chr7g0240271 28.376 585 406 9 67 641 2 583 2.66e-75 252
Msa1297750 MtrunA17_Chr5g0415841 31.140 456 303 6 178 625 1 453 6.41e-74 245
Msa1297750 MtrunA17_Chr6g0451841 30.741 553 327 11 101 630 16 535 1.29e-71 241
Msa1297750 MtrunA17_Chr8g0379991 31.802 566 338 10 108 629 1 562 1.44e-71 242
Msa1297750 MtrunA17_Chr1g0177591 29.553 582 350 19 61 625 23 561 3.73e-69 235
Msa1297750 MtrunA17_Chr2g0331511 28.090 534 367 8 102 625 33 559 5.13e-68 234
Msa1297750 MtrunA17_Chr4g0003761 28.442 552 375 10 102 642 42 584 7.21e-68 233
Msa1297750 MtrunA17_Chr2g0325951 29.391 575 367 13 77 639 1 548 8.03e-68 231
Msa1297750 MtrunA17_Chr2g0325961 28.671 572 376 11 77 639 1 549 2.98e-67 229
Msa1297750 MtrunA17_Chr7g0235521 30.670 463 307 9 190 641 13 472 5.40e-67 227
Msa1297750 MtrunA17_Chr2g0331521 27.915 566 388 9 73 625 2 560 1.70e-66 228
Msa1297750 MtrunA17_Chr7g0240281 28.283 594 405 10 65 645 4 589 4.20e-66 228
Msa1297750 MtrunA17_Chr2g0331481 28.885 547 346 12 102 625 37 563 6.16e-66 228
Msa1297750 MtrunA17_Chr7g0240131 30.388 464 309 9 190 642 13 473 1.50e-65 223
Msa1297750 MtrunA17_Chr2g0326211 28.769 577 368 11 77 639 1 548 3.09e-65 224
Msa1297750 MtrunA17_Chr7g0240181 30.238 463 309 9 190 641 13 472 1.28e-64 221
Msa1297750 MtrunA17_Chr7g0240211 30.238 463 309 9 190 641 13 472 1.30e-64 221
Msa1297750 MtrunA17_Chr2g0331471 27.796 608 386 16 45 625 45 626 3.30e-64 224
Msa1297750 MtrunA17_Chr1g0147631 28.415 549 372 10 102 639 37 575 9.42e-64 221
Msa1297750 MtrunA17_Chr3g0142111 37.224 317 192 4 57 369 11 324 1.78e-62 211
Msa1297750 MtrunA17_Chr1g0177611 31.690 426 272 11 206 625 20 432 1.01e-61 212
Msa1297750 MtrunA17_Chr7g0240151 28.788 462 299 9 190 641 13 454 1.83e-58 204
Msa1297750 MtrunA17_Chr1g0177631 30.588 425 278 10 206 625 20 432 1.32e-56 198
Msa1297750 MtrunA17_Chr3g0112631 35.274 292 170 8 364 642 3 288 3.53e-56 192
Msa1297750 MtrunA17_Chr2g0331461 28.545 536 362 8 102 625 37 563 1.09e-55 200
Msa1297750 MtrunA17_Chr3g0142121 36.042 283 170 5 365 646 11 283 7.62e-55 188
Msa1297750 MtrunA17_Chr7g0234151 29.817 436 272 10 197 628 13 418 8.19e-44 162
Msa1297750 MtrunA17_Chr7g0234381 30.536 429 267 10 201 628 20 418 1.66e-43 161
Msa1297750 MtrunA17_Chr4g0060071 34.728 239 148 4 391 622 52 289 2.57e-43 157
Msa1297750 MtrunA17_Chr7g0234181 29.639 415 257 9 217 628 31 413 4.76e-40 151
Msa1297750 MtrunA17_Chr7g0261721 36.923 195 116 2 440 628 5 198 1.13e-36 137
Msa1297750 MtrunA17_Chr3g0112651 33.333 189 120 3 177 365 21 203 1.99e-27 110
Msa1297750 MtrunA17_Chr1g0147591 23.196 194 140 3 219 409 9 196 3.16e-22 95.1
Msa1297750 MtrunA17_Chr7g0261831 32.278 158 96 3 321 476 3 151 1.64e-21 93.6
Msa1297750 MtrunA17_Chr7g0261671 37.391 115 72 0 60 174 2 116 4.24e-21 89.4
Msa1297750 MtrunA17_Chr2g0326221 29.817 218 128 6 409 625 24 217 1.08e-20 91.3
Msa1297750 MtrunA17_Chr4g0060061 36.207 116 74 0 212 327 18 133 6.19e-19 83.6
Msa1297750 MtrunA17_Chr4g0014851 42.424 99 57 0 77 175 17 115 1.15e-18 83.6
Msa1297750 MtrunA17_Chr1g0166721 35.922 103 63 1 64 166 2 101 6.01e-18 81.3
Msa1297750 MtrunA17_Chr3g0112661 37.500 112 64 1 78 189 19 124 3.86e-17 78.6
Msa1297750 MtrunA17_Chr8g0382591 36.449 107 66 2 364 468 3 109 1.52e-12 65.5
Msa1297750 MtrunA17_Chr3g0082621 45.312 64 35 0 112 175 8 71 1.95e-11 60.8
Msa1297750 MtrunA17_Chr4g0060051 30.769 104 72 0 70 173 2 105 2.85e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297750 AT1G32450.1 73.401 594 149 4 57 641 1 594 0.0 899
Msa1297750 AT4G21680.1 68.815 574 167 4 73 637 9 579 0.0 790
Msa1297750 AT5G19640.1 60.294 544 198 5 93 634 60 587 0.0 656
Msa1297750 AT3G54140.1 43.993 566 305 6 70 629 2 561 7.45e-169 494
Msa1297750 AT3G54140.2 43.993 566 305 6 70 629 2 561 7.45e-169 494
Msa1297750 AT2G02040.1 42.234 573 320 5 64 630 13 580 1.02e-159 471
Msa1297750 AT1G62200.1 43.013 551 307 5 78 626 38 583 3.77e-158 468
Msa1297750 AT1G62200.2 40.862 580 307 6 78 626 38 612 9.50e-152 452
Msa1297750 AT1G62200.3 40.862 580 307 6 78 626 52 626 1.10e-151 452
Msa1297750 AT5G01180.2 39.859 567 326 6 69 628 2 560 1.39e-146 437
Msa1297750 AT5G01180.3 39.859 567 326 6 69 628 2 560 1.39e-146 437
Msa1297750 AT5G01180.1 39.859 567 326 6 69 628 2 560 1.39e-146 437
Msa1297750 AT2G02020.1 40.175 570 288 9 60 622 11 534 2.58e-139 418
Msa1297750 AT2G26690.1 38.516 566 331 7 70 629 2 556 3.94e-123 377
Msa1297750 AT3G54450.1 37.279 566 316 9 89 639 9 550 1.14e-122 375
Msa1297750 AT5G46050.1 35.507 552 336 6 69 611 4 544 8.03e-120 369
Msa1297750 AT2G02020.2 36.842 570 286 11 60 622 11 513 1.15e-116 359
Msa1297750 AT5G46040.1 34.539 553 342 6 69 612 4 545 8.49e-115 356
Msa1297750 AT2G26690.2 39.048 525 303 7 111 629 10 523 1.38e-113 352
Msa1297750 AT1G12110.1 36.224 588 356 9 69 644 5 585 1.52e-113 353
Msa1297750 AT2G26690.3 39.155 521 300 7 115 629 2 511 1.84e-113 351
Msa1297750 AT2G37900.1 32.975 558 361 7 70 626 16 561 5.28e-111 346
Msa1297750 AT2G40460.1 36.170 564 336 7 70 625 2 549 2.71e-110 344
Msa1297750 AT5G13400.1 34.662 577 354 7 81 641 52 621 2.18e-108 340
Msa1297750 AT3G53960.1 32.799 561 364 7 70 625 15 567 2.94e-107 337
Msa1297750 AT1G69870.1 33.640 544 353 6 92 629 51 592 3.72e-105 332
Msa1297750 AT1G68570.1 34.349 591 366 9 60 641 1 578 3.12e-104 329
Msa1297750 AT3G21670.1 35.106 564 335 8 78 629 12 556 5.00e-102 323
Msa1297750 AT1G59740.1 34.075 584 366 12 64 640 13 584 1.18e-101 322
Msa1297750 AT1G68570.2 34.615 546 345 6 105 641 6 548 4.17e-100 317
Msa1297750 AT1G72140.1 34.103 563 318 9 80 626 22 547 1.03e-97 310
Msa1297750 AT1G27080.1 35.484 558 345 10 92 644 14 561 1.59e-96 308
Msa1297750 AT1G72130.1 35.912 543 299 9 93 626 26 528 6.24e-96 305
Msa1297750 AT1G22540.1 34.435 575 340 10 70 634 8 555 7.24e-96 306
Msa1297750 AT2G37900.2 32.657 493 319 7 135 626 2 482 3.24e-95 302
Msa1297750 AT5G46050.2 36.795 443 258 7 178 611 3 432 2.55e-92 294
Msa1297750 AT1G72125.1 33.569 566 339 9 73 626 11 551 7.82e-91 293
Msa1297750 AT1G33440.1 33.391 575 361 10 61 628 8 567 8.58e-91 294
Msa1297750 AT1G27080.2 34.972 529 329 10 121 644 1 519 3.09e-90 290
Msa1297750 AT1G72120.1 33.392 566 336 10 73 626 11 547 5.70e-90 290
Msa1297750 AT1G69850.1 31.404 570 370 6 71 622 4 570 2.49e-89 290
Msa1297750 AT1G22550.1 33.217 575 330 12 74 626 12 554 7.67e-89 288
Msa1297750 AT1G18880.1 30.906 563 371 6 96 645 23 580 2.20e-86 282
Msa1297750 AT1G22570.1 31.972 563 337 13 67 609 2 538 1.52e-85 279
Msa1297750 AT5G62680.1 30.199 553 358 8 96 629 47 590 1.14e-83 275
Msa1297750 AT3G47960.1 30.254 552 357 8 96 629 65 606 1.84e-83 275
Msa1297750 AT5G62730.1 29.698 596 356 9 55 622 16 576 2.57e-83 274
Msa1297750 AT1G27040.1 30.018 563 371 6 78 631 13 561 8.79e-83 272
Msa1297750 AT1G27040.2 30.018 563 371 6 78 631 9 557 9.41e-83 271
Msa1297750 AT1G22570.2 32.233 515 306 12 112 609 13 501 2.74e-80 264
Msa1297750 AT5G14940.1 30.541 573 326 15 101 642 16 547 1.20e-78 260
Msa1297750 AT3G45720.1 27.872 531 361 7 114 641 41 552 1.57e-78 260
Msa1297750 AT3G45650.1 29.055 561 364 9 73 625 3 537 5.48e-77 256
Msa1297750 AT1G27040.3 30.206 533 349 6 108 631 11 529 6.16e-77 255
Msa1297750 AT3G45710.1 27.599 558 383 8 92 647 21 559 8.28e-77 256
Msa1297750 AT1G72130.2 35.172 435 243 8 201 626 6 410 4.91e-76 249
Msa1297750 AT1G72130.3 35.172 435 243 8 201 626 6 410 4.91e-76 249
Msa1297750 AT3G45680.1 27.993 568 385 9 78 643 8 553 1.88e-75 252
Msa1297750 AT3G45660.2 28.007 607 395 11 43 641 1 573 5.84e-75 251
Msa1297750 AT5G62730.2 29.455 550 328 8 98 622 3 517 1.39e-74 249
Msa1297750 AT3G45660.1 28.648 562 366 10 88 641 18 552 2.48e-74 249
Msa1297750 AT3G45660.3 28.648 562 366 10 88 641 18 552 2.48e-74 249
Msa1297750 AT1G52190.1 27.911 541 365 10 102 625 31 563 1.13e-72 246
Msa1297750 AT3G45650.2 27.939 587 363 10 73 625 3 563 2.38e-72 244
Msa1297750 AT3G16180.1 29.264 557 367 12 86 625 16 562 4.91e-72 244
Msa1297750 AT3G25260.1 28.804 552 337 12 82 626 11 513 6.59e-69 233
Msa1297750 AT3G45700.1 25.887 564 388 11 82 642 5 541 1.24e-67 231
Msa1297750 AT3G01350.1 28.325 579 341 13 101 642 16 557 4.59e-67 230
Msa1297750 AT1G69860.1 30.297 538 359 9 96 629 22 547 1.01e-65 226
Msa1297750 AT3G45690.1 26.355 535 334 9 110 643 36 511 2.31e-62 216
Msa1297750 AT5G28470.2 26.306 536 387 5 90 621 15 546 5.91e-62 216
Msa1297750 AT5G28470.1 26.119 536 386 6 90 621 15 544 3.77e-59 208
Msa1297750 AT3G25280.1 27.907 559 339 15 82 626 11 519 2.35e-58 205
Msa1297750 AT5G11570.1 28.302 530 297 11 102 626 23 474 1.22e-54 194
Msa1297750 AT2G38100.2 25.192 520 327 18 120 621 2 477 1.47e-33 135
Msa1297750 AT2G38100.3 25.283 530 333 19 110 621 15 499 1.54e-33 135
Msa1297750 AT2G38100.1 25.283 530 333 19 110 621 9 493 1.81e-33 135

Find 141 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGGGCTCTTGGGTTT+TGG 0.139139 8_3:+58293290 Msa1297750:CDS
GGTTTAAAGTGTCTATATTT+TGG 0.157297 8_3:-58293364 None:intergenic
CCAGATTTGGCTCTGTTTGC+TGG 0.157495 8_3:-58289600 None:intergenic
TACTAAGACTTCTTCCAATT+TGG 0.183807 8_3:+58294134 Msa1297750:CDS
CTTTCCTAAGTGATTCTTAT+TGG 0.215575 8_3:+58292816 Msa1297750:CDS
CTAGCAACCTTAGCATTCTT+TGG 0.234711 8_3:+58292677 Msa1297750:CDS
ACTTCTTCAACTTGAGTAAT+AGG 0.241585 8_3:-58294103 None:intergenic
TTTCCTAAGTGATTCTTATT+GGG 0.261209 8_3:+58292817 Msa1297750:CDS
ATTCCCCAGTATGCACTTAT+AGG 0.275736 8_3:+58294505 Msa1297750:CDS
TTTGCTGCTTCAAGGAAATT+AGG 0.280281 8_3:+58293424 Msa1297750:CDS
TATAACTTCAAGAGATTTAG+AGG 0.282564 8_3:+58294042 Msa1297750:CDS
CTGGAATAGTGGAATGTTAT+AGG 0.286030 8_3:+58294431 Msa1297750:CDS
GTTTACATCTTCTCTCTTGT+TGG 0.299285 8_3:+58292791 Msa1297750:CDS
GAGGAAGATTGTTGTTGATT+TGG 0.311217 8_3:-58289116 None:intergenic
TCAAAGTTTCAAAGACAAAA+AGG 0.325831 8_3:-58289169 None:intergenic
ATTATTGTGCAAAGCCAAAT+TGG 0.326777 8_3:-58294148 None:intergenic
TTTCCATTTCCACAACCTTT+TGG 0.329693 8_3:-58293028 None:intergenic
TTAAAGAGACTCAGGTAAAA+AGG 0.330271 8_3:-58294978 None:intergenic
TGACCTCTATTCAAGTTTCC+AGG 0.340603 8_3:-58294712 None:intergenic
AGCAAACCATCTCCCAGATT+TGG 0.342083 8_3:-58289613 None:intergenic
TTTATGTACTTTGAAATTCA+TGG 0.344293 8_3:+58295042 Msa1297750:three_prime_UTR
TTGAGTGATCCTCATCAAAT+TGG 0.346545 8_3:-58293165 None:intergenic
AGAGATTTAGAGGTCCAAAA+AGG 0.353250 8_3:+58294052 Msa1297750:CDS
ATGTTAACACTTCTCCATAT+TGG 0.354261 8_3:-58294883 None:intergenic
ATCACCAATGGCTTGCTTAG+AGG 0.355045 8_3:+58289193 Msa1297750:CDS
AAGTATAATCATTTCCAATA+TGG 0.355664 8_3:+58294869 Msa1297750:exon
CAACCAAACATTGCAACATT+TGG 0.355743 8_3:+58293136 Msa1297750:CDS
AAGCTCCTATAAGTGCATAC+TGG 0.369573 8_3:-58294510 None:intergenic
ACAGAAGAGTTAACTCTTGA+TGG 0.370181 8_3:+58289555 Msa1297750:CDS
CCTGATGGATTAAAGAGCTT+TGG 0.375184 8_3:+58294583 Msa1297750:CDS
GGAACATTCAAGTTTGGAAA+TGG 0.377855 8_3:+58293063 Msa1297750:CDS
ATGTGGGGAACATTCAAGTT+TGG 0.379230 8_3:+58293057 Msa1297750:CDS
AGACCAAAAGGTTGTGGAAA+TGG 0.381408 8_3:+58293025 Msa1297750:CDS
CCAGCAAACAGAGCCAAATC+TGG 0.383414 8_3:+58289600 Msa1297750:CDS
TAGAAGAAAATGTGATGGTT+TGG 0.386182 8_3:+58294943 Msa1297750:three_prime_UTR
ACCTTAGCATTCTTTGGAGT+TGG 0.386511 8_3:+58292683 Msa1297750:CDS
CAGATTTGGCTCTGTTTGCT+GGG 0.386593 8_3:-58289599 None:intergenic
TCATTAAATCTCCTTGTCTT+CGG 0.392639 8_3:+58289086 Msa1297750:CDS
GCACCAAATGTTGCAATGTT+TGG 0.396893 8_3:-58293139 None:intergenic
TCTGTTCCTGACAAGGGTGT+TGG 0.404195 8_3:+58292718 Msa1297750:CDS
AAAACATGTGCTATCTTTCA+AGG 0.405049 8_3:+58292848 Msa1297750:CDS
GTAAGTTCCATTGCTAATGA+TGG 0.408793 8_3:+58295159 Msa1297750:three_prime_UTR
CTGTTCCTGACAAGGGTGTT+GGG 0.412390 8_3:+58292719 Msa1297750:CDS
GGAGTTCAAATGACATCAAA+TGG 0.414438 8_3:+58293445 Msa1297750:CDS
CCAAAGCTCTTTAATCCATC+AGG 0.416164 8_3:-58294583 None:intergenic
GATGAAGGATTATGGGCTCT+TGG 0.416318 8_3:+58293283 Msa1297750:CDS
TATCTGATTGCCTTAGGAAA+TGG 0.418849 8_3:+58293106 Msa1297750:CDS
ATGAAGGATTATGGGCTCTT+GGG 0.420386 8_3:+58293284 Msa1297750:CDS
CTTGACCCAACACCCTTGTC+AGG 0.427124 8_3:-58292724 None:intergenic
CAAGCTCTCTAAGTATCTTC+TGG 0.430069 8_3:+58294479 Msa1297750:CDS
CTCTTGATGGGAGTGTTGAT+TGG 0.437188 8_3:+58289568 Msa1297750:CDS
CTTGTATGTCACAGATGAAA+AGG 0.442563 8_3:+58293474 Msa1297750:CDS
TTCAATGCTCAAACACCTGA+TGG 0.444902 8_3:+58294568 Msa1297750:CDS
CTTGCTTTGCTTAGACCAAA+AGG 0.446216 8_3:+58293013 Msa1297750:CDS
GAACATTCAAGTTTGGAAAT+GGG 0.449440 8_3:+58293064 Msa1297750:CDS
TCGAAGCTAGACATGCTTGC+TGG 0.451741 8_3:-58294259 None:intergenic
AGGCAATCAGATAGATTGAT+AGG 0.456678 8_3:-58293096 None:intergenic
AGCTCCTATAAGTGCATACT+GGG 0.458316 8_3:-58294509 None:intergenic
AAATCTGGGAGATGGTTTGC+TGG 0.458977 8_3:+58289615 Msa1297750:CDS
AAGAAGTCAAAACAGCCAAT+AGG 0.459055 8_3:-58294753 None:intergenic
CTCACTGAACTTCAAAGAAT+GGG 0.463268 8_3:+58294370 Msa1297750:CDS
TTGCTTAGACCAAAAGGTTG+TGG 0.464656 8_3:+58293019 Msa1297750:CDS
GATTATACTTTGCAGCTACT+AGG 0.467336 8_3:-58294856 None:intergenic
TCAATCTATCTGATTGCCTT+AGG 0.469401 8_3:+58293100 Msa1297750:CDS
TGAATAGAGGTCACTTGGAT+AGG 0.471177 8_3:+58294722 Msa1297750:CDS
GAAATTCATGGTTGTATCCA+TGG 0.472052 8_3:+58295054 Msa1297750:three_prime_UTR
ATAAACTGAAAATCTTAGTC+AGG 0.474709 8_3:-58295024 None:intergenic
ACTCACTGAACTTCAAAGAA+TGG 0.482231 8_3:+58294369 Msa1297750:CDS
AAGTTTCCAGGGATCCATCC+TGG 0.501655 8_3:-58294700 None:intergenic
TTGAAGTTCAGTGAGTCCCT+TGG 0.502306 8_3:-58294362 None:intergenic
GAAGTATTCACTATATATAG+AGG 0.510398 8_3:-58289047 None:intergenic
CGAGTACTTGATCCACTTGT+CGG 0.511632 8_3:+58294319 Msa1297750:CDS
TATTATGAATAAGAGAAGGA+AGG 0.513383 8_3:+58294910 Msa1297750:three_prime_UTR
TCAACTGAAGATCACATGCC+AGG 0.517301 8_3:+58294682 Msa1297750:CDS
TTGATACCCTCCATTTCCTA+AGG 0.519212 8_3:-58293116 None:intergenic
CACATGCCAGGATGGATCCC+TGG 0.519851 8_3:+58294694 Msa1297750:CDS
ACTTGGCAGAATCTTGAAAG+AGG 0.521999 8_3:-58293397 None:intergenic
AAAGGAGAGTTATTCAAAAG+TGG 0.523525 8_3:+58293186 Msa1297750:CDS
GAACTTCAAAGAATGGGAAT+CGG 0.527583 8_3:+58294376 Msa1297750:CDS
CTGATTGCCTTAGGAAATGG+AGG 0.529592 8_3:+58293109 Msa1297750:CDS
ATAATCGCAATGGTTACAGC+TGG 0.529971 8_3:+58294412 Msa1297750:CDS
ATTATGAATAAGAGAAGGAA+GGG 0.530098 8_3:+58294911 Msa1297750:three_prime_UTR
CCCTTGTCAGGAACAGAACT+AGG 0.535224 8_3:-58292712 None:intergenic
AATGGTTACAGCTGGAATAG+TGG 0.536685 8_3:+58294420 Msa1297750:CDS
CAGACCTCTAAGCAAGCCAT+TGG 0.536733 8_3:-58289197 None:intergenic
AAAGATACCATGGGTTATGT+TGG 0.537608 8_3:-58294078 None:intergenic
TTCCTAAGTGATTCTTATTG+GGG 0.537811 8_3:+58292818 Msa1297750:CDS
TGAAACTTTGACATCACCAA+TGG 0.540822 8_3:+58289181 Msa1297750:CDS
ATGCTAAGGTTGCTAGACCT+TGG 0.541001 8_3:-58292670 None:intergenic
AAACTTGAATAGAGGTCACT+TGG 0.546503 8_3:+58294717 Msa1297750:CDS
CAGCAAACAGAGCCAAATCT+GGG 0.549410 8_3:+58289601 Msa1297750:CDS
GTGGTTTCAGAATATTCAGA+TGG 0.554184 8_3:+58294807 Msa1297750:CDS
CTGAAGATCACATGCCAGGA+TGG 0.554639 8_3:+58294686 Msa1297750:CDS
TGCATGACAAGTATCTCACT+TGG 0.556372 8_3:+58294616 Msa1297750:CDS
ACCTAGTTCTGTTCCTGACA+AGG 0.556376 8_3:+58292711 Msa1297750:CDS
GACCTCTATTCAAGTTTCCA+GGG 0.557167 8_3:-58294711 None:intergenic
TGTGTGGAGAATCTTTCTGT+TGG 0.563547 8_3:-58293512 None:intergenic
AACATGTCCATCATTAGCAA+TGG 0.564737 8_3:-58295166 None:intergenic
CAGAAGAGTTAACTCTTGAT+GGG 0.565310 8_3:+58289556 Msa1297750:CDS
TGCACTTATAGGAGCTTCTG+AGG 0.569295 8_3:+58294516 Msa1297750:CDS
ACGGTAGAAGAAAATGAAGA+TGG 0.571774 8_3:-58294296 None:intergenic
CTTGAAAGAGGATTGCCACA+AGG 0.573760 8_3:-58293385 None:intergenic
GAAATGGAAAACTTGAATGT+GGG 0.577470 8_3:+58293041 Msa1297750:CDS
CAAAGCAAGGTATGTTGTAA+CGG 0.578717 8_3:-58292999 None:intergenic
CTGCTAACAATGTTAGCAAG+TGG 0.580663 8_3:+58292759 Msa1297750:CDS
TTGGATGAAAGCCGAAGACA+AGG 0.581750 8_3:-58289097 None:intergenic
TATAGACACTTTAAACCTTG+TGG 0.582951 8_3:+58293370 Msa1297750:CDS
ATCCCTGGAAACTTGAATAG+AGG 0.584308 8_3:+58294709 Msa1297750:CDS
CGTTATAGCTATAATCGCAA+TGG 0.587150 8_3:+58294402 Msa1297750:CDS
ACGTTCAATTTATACAACCA+TGG 0.588268 8_3:-58295071 None:intergenic
TTCCCCAATAAGAATCACTT+AGG 0.589696 8_3:-58292820 None:intergenic
ACAGAGCCAAATCTGGGAGA+TGG 0.590338 8_3:+58289607 Msa1297750:CDS
GAATACAGTTAAAGAGACTC+AGG 0.593665 8_3:-58294986 None:intergenic
AACAATGTTAGCAAGTGGAC+TGG 0.597557 8_3:+58292764 Msa1297750:CDS
TCCAACTCCAAAGAATGCTA+AGG 0.597785 8_3:-58292684 None:intergenic
GGAAATGGAAAACTTGAATG+TGG 0.600088 8_3:+58293040 Msa1297750:CDS
TATATATTATGAATAAGAGA+AGG 0.610955 8_3:+58294906 Msa1297750:three_prime_UTR
CTTATATTGCATGTGCAAAG+TGG 0.617065 8_3:+58294788 Msa1297750:CDS
CCTAGTTCTGTTCCTGACAA+GGG 0.617734 8_3:+58292712 Msa1297750:CDS
GCATGACAAGTATCTCACTT+GGG 0.623076 8_3:+58294617 Msa1297750:CDS
GTAATAGGACAAAGATACCA+TGG 0.629501 8_3:-58294088 None:intergenic
AGTACTAGAAGAAAATGTGA+TGG 0.631431 8_3:+58294938 Msa1297750:three_prime_UTR
GATGGGAGTGTTGATTGGCA+TGG 0.632528 8_3:+58289573 Msa1297750:CDS
CTTACTTGAAGCCGTGTGTG+TGG 0.633341 8_3:-58293528 None:intergenic
TAATGATGAAACAGAGTGTG+TGG 0.633725 8_3:-58289069 None:intergenic
AGGCTTAAGTATGCAAAACA+AGG 0.635128 8_3:+58294451 Msa1297750:CDS
TGGTGCTGACCAATTTGATG+AGG 0.636240 8_3:+58293156 Msa1297750:CDS
AGAAAGATTCTCCACACACA+CGG 0.639314 8_3:+58293517 Msa1297750:CDS
ATTTGATGAGGATCACTCAA+AGG 0.639587 8_3:+58293168 Msa1297750:CDS
AAGCTAGACATGCTTGCTGG+TGG 0.641340 8_3:-58294256 None:intergenic
GAACAAGGAAGACCCAAGAG+AGG 0.644148 8_3:-58295121 None:intergenic
TAATAGGACAAAGATACCAT+GGG 0.644527 8_3:-58294087 None:intergenic
AAGGAGGCCAACATAACCCA+TGG 0.645622 8_3:+58294071 Msa1297750:CDS
TTGCTTAGAGGTCTGCAAAG+AGG 0.646487 8_3:+58289205 Msa1297750:CDS
TGTTTGAGAAAAGTGAACCA+AGG 0.671848 8_3:-58293240 None:intergenic
AAATGAAGATGGCTACGCTG+AGG 0.695724 8_3:-58294285 None:intergenic
TTTAATCTACCAGTGAACCA+AGG 0.698549 8_3:+58292653 Msa1297750:intron
AAATGGAAAACTTGAATGTG+GGG 0.708899 8_3:+58293042 Msa1297750:CDS
CAAGTGGATCAAGTACTCGA+CGG 0.715679 8_3:-58294315 None:intergenic
TGATTGCCTTAGGAAATGGA+GGG 0.717908 8_3:+58293110 Msa1297750:CDS
GCTCCTATAAGTGCATACTG+GGG 0.781492 8_3:-58294508 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTATTTTT+AGG + chr8_3:58290719-58290738 Msa1297750:intron 0.0%
!!! TTTTTTATTTTTTATTTTTA+GGG + chr8_3:58290720-58290739 Msa1297750:intron 0.0%
!! AATATTATATAGTTAAACTA+AGG + chr8_3:58289449-58289468 Msa1297750:intron 10.0%
!!! TTTATTTTATTACATCAAAT+TGG + chr8_3:58289708-58289727 Msa1297750:intron 10.0%
!! AATATGGTATTATAAATTAA+GGG - chr8_3:58290023-58290042 None:intergenic 10.0%
!!! AAATTCAAACATTTTAATTT+AGG - chr8_3:58292353-58292372 None:intergenic 10.0%
!! AATATTTAATTCATTAGAAA+GGG - chr8_3:58292384-58292403 None:intergenic 10.0%
!! AAATATTTAATTCATTAGAA+AGG - chr8_3:58292385-58292404 None:intergenic 10.0%
!!! AACATTATATTTTAGAAACA+AGG - chr8_3:58289265-58289284 None:intergenic 15.0%
!! CACATATCTAAATATAAATT+TGG + chr8_3:58289758-58289777 Msa1297750:intron 15.0%
!!! CATATATATGATTTAAGATA+GGG - chr8_3:58289999-58290018 None:intergenic 15.0%
!! GAATATGGTATTATAAATTA+AGG - chr8_3:58290024-58290043 None:intergenic 15.0%
!!! AAATCGTATTTTATATTATG+TGG + chr8_3:58290092-58290111 Msa1297750:intron 15.0%
!!! ATTTTATATTATGTGGATTA+AGG + chr8_3:58290099-58290118 Msa1297750:intron 15.0%
!! TGAATAAACATATATGATTA+CGG - chr8_3:58290294-58290313 None:intergenic 15.0%
!!! TTGTTTTTTGTTACTTTTTT+TGG - chr8_3:58290339-58290358 None:intergenic 15.0%
!! TTACTAATGTGTTTAATTAT+GGG - chr8_3:58291091-58291110 None:intergenic 15.0%
!! TCAATTCAAACATTAAAAAT+AGG - chr8_3:58291360-58291379 None:intergenic 15.0%
!! AAAAAAAAAATAATGTATGG+AGG + chr8_3:58292526-58292545 Msa1297750:intron 15.0%
!! TAGTAAGAAATTAATTAAAG+TGG - chr8_3:58292916-58292935 None:intergenic 15.0%
!!! TAATTTGTTCATTTATGTTA+TGG + chr8_3:58292947-58292966 Msa1297750:intron 15.0%
!! TATATATTATGAATAAGAGA+AGG + chr8_3:58294906-58294925 Msa1297750:three_prime_UTR 15.0%
!! ATATGGAAAAGTTGTATTTA+TGG - chr8_3:58289234-58289253 None:intergenic 20.0%
!! GAAACAAGGAATAAATAATA+TGG - chr8_3:58289251-58289270 None:intergenic 20.0%
!!! AATCAAACAGATTTTTGTTT+TGG - chr8_3:58289344-58289363 None:intergenic 20.0%
!!! TGTGTAGTTAATTTTTCAAA+AGG - chr8_3:58289918-58289937 None:intergenic 20.0%
!!! CCATATATATGATTTAAGAT+AGG - chr8_3:58290000-58290019 None:intergenic 20.0%
!! CCTATCTTAAATCATATATA+TGG + chr8_3:58289997-58290016 Msa1297750:intron 20.0%
!!! TACGATTTTATTAATACACA+GGG - chr8_3:58290080-58290099 None:intergenic 20.0%
!!! ATACGATTTTATTAATACAC+AGG - chr8_3:58290081-58290100 None:intergenic 20.0%
!! ATATCAAATAGATAGCTTAT+TGG - chr8_3:58290233-58290252 None:intergenic 20.0%
!! GTTACTAATGTGTTTAATTA+TGG - chr8_3:58291092-58291111 None:intergenic 20.0%
!! AAGTAAATAGTGACAAAATT+TGG - chr8_3:58291142-58291161 None:intergenic 20.0%
!! TTTGTCCTAAATAAAATGTT+AGG + chr8_3:58291306-58291325 Msa1297750:intron 20.0%
!!! TCATACCTAACATTTTATTT+AGG - chr8_3:58291314-58291333 None:intergenic 20.0%
!!! TTTGAAATTTGATAGTAACT+CGG + chr8_3:58291402-58291421 Msa1297750:intron 20.0%
!!! CACAATCTTTTAGATTTTTT+TGG + chr8_3:58291564-58291583 Msa1297750:intron 20.0%
!! TATAAAATATGCAAAGGTTT+CGG - chr8_3:58291609-58291628 None:intergenic 20.0%
!! ACAATGTATAAAATATGCAA+AGG - chr8_3:58291615-58291634 None:intergenic 20.0%
!! AGGAAAAATATTTCTTGATT+TGG - chr8_3:58291878-58291897 None:intergenic 20.0%
!!! ATCAAGAAATATTTTTCCTT+TGG + chr8_3:58291879-58291898 Msa1297750:intron 20.0%
!!! AAATAAATTTAGGTTAAGAG+AGG + chr8_3:58292151-58292170 Msa1297750:intron 20.0%
!!! AATAAATTTAGGTTAAGAGA+GGG + chr8_3:58292152-58292171 Msa1297750:intron 20.0%
!! TTCTATCACATATTATTTGT+TGG - chr8_3:58292289-58292308 None:intergenic 20.0%
!!! TCAAACATTTTAATTTAGGA+TGG - chr8_3:58292349-58292368 None:intergenic 20.0%
!! TCATGAAAAAAAAAGTTCAT+AGG + chr8_3:58292460-58292479 Msa1297750:intron 20.0%
!!! ATTTTTTAGCTACTTTTACT+TGG + chr8_3:58293210-58293229 Msa1297750:CDS 20.0%
!!! TTTAAAGTGTCTATATTTTG+GGG - chr8_3:58293365-58293384 None:intergenic 20.0%
!!! GTTTAAAGTGTCTATATTTT+GGG - chr8_3:58293366-58293385 None:intergenic 20.0%
!! GTAATTAAACAATAGAACTT+CGG + chr8_3:58293871-58293890 Msa1297750:intron 20.0%
!! ATATAAGTCATAATTGCATT+TGG + chr8_3:58293942-58293961 Msa1297750:intron 20.0%
!! ATAGATGATAAATGGAAAAT+TGG - chr8_3:58293994-58294013 None:intergenic 20.0%
!! AAGTATAATCATTTCCAATA+TGG + chr8_3:58294869-58294888 Msa1297750:exon 20.0%
!!! TTTATGTACTTTGAAATTCA+TGG + chr8_3:58295042-58295061 Msa1297750:three_prime_UTR 20.0%
!! AACTTACAAAAAATGAAAGA+AGG - chr8_3:58295146-58295165 None:intergenic 20.0%
!! GAAGTATTCACTATATATAG+AGG - chr8_3:58289050-58289069 None:intergenic 25.0%
! TCAAAGTTTCAAAGACAAAA+AGG - chr8_3:58289172-58289191 None:intergenic 25.0%
!! GGACTTTAATTTAGTAATGT+TGG - chr8_3:58289288-58289307 None:intergenic 25.0%
! TTAACACATATACGTCAAAA+TGG - chr8_3:58289504-58289523 None:intergenic 25.0%
! ATGTGTTAAAAAATTTGTGC+AGG + chr8_3:58289515-58289534 Msa1297750:intron 25.0%
! TGTGTTAAAAAATTTGTGCA+GGG + chr8_3:58289516-58289535 Msa1297750:intron 25.0%
! TAACGTAAAACTTCTTTGTT+AGG - chr8_3:58289879-58289898 None:intergenic 25.0%
! TGGACTCATAAAAATGAATA+TGG - chr8_3:58290039-58290058 None:intergenic 25.0%
!!! ACGTATAATTTGATGATGAT+AGG + chr8_3:58290407-58290426 Msa1297750:intron 25.0%
! ATTGCATATTCAATAATAGC+TGG - chr8_3:58290487-58290506 None:intergenic 25.0%
! ACAACTTTAATTAACACTAC+AGG + chr8_3:58290641-58290660 Msa1297750:intron 25.0%
!!! TTTTTAGGGTTTTGATTTGT+TGG + chr8_3:58290734-58290753 Msa1297750:intron 25.0%
!! TGTTCTATCTAAAACCAAAA+CGG - chr8_3:58290775-58290794 None:intergenic 25.0%
! GAGACAAAAAATAGGAAAAA+AGG + chr8_3:58290858-58290877 Msa1297750:intron 25.0%
! CATACACTTTCATATACTTA+TGG + chr8_3:58291004-58291023 Msa1297750:intron 25.0%
! CAACAATAAGGTTAAGAATA+TGG + chr8_3:58291252-58291271 Msa1297750:intron 25.0%
! AATAAGGTTAAGAATATGGT+AGG + chr8_3:58291256-58291275 Msa1297750:intron 25.0%
!!! AGGACTTGTTTTTTTGTTTT+AGG - chr8_3:58291936-58291955 None:intergenic 25.0%
! AAAAACAAGTCCTATTAGTT+AGG + chr8_3:58291943-58291962 Msa1297750:intron 25.0%
! TGAACAAATATGGTGTAATT+TGG - chr8_3:58292225-58292244 None:intergenic 25.0%
! TTAGATCTTCTGAACAAATA+TGG - chr8_3:58292235-58292254 None:intergenic 25.0%
! TTTCCTAAGTGATTCTTATT+GGG + chr8_3:58292817-58292836 Msa1297750:CDS 25.0%
! ATGTTATGGTTTGATATAAC+AGG + chr8_3:58292961-58292980 Msa1297750:intron 25.0%
! TGTTATGGTTTGATATAACA+GGG + chr8_3:58292962-58292981 Msa1297750:intron 25.0%
!! ACTTTTCTCAAACACTATTT+TGG + chr8_3:58293249-58293268 Msa1297750:CDS 25.0%
!! CTTTTCTCAAACACTATTTT+GGG + chr8_3:58293250-58293269 Msa1297750:CDS 25.0%
!!! ATTTTGAAGATGAAGGATTA+TGG + chr8_3:58293275-58293294 Msa1297750:CDS 25.0%
!!! TTTTGAAGATGAAGGATTAT+GGG + chr8_3:58293276-58293295 Msa1297750:CDS 25.0%
!!! GGTTTAAAGTGTCTATATTT+TGG - chr8_3:58293367-58293386 None:intergenic 25.0%
! TGTAAACATCAATTCGTTAT+TGG - chr8_3:58293568-58293587 None:intergenic 25.0%
! TTGTTTAATTACTCTTTAGC+AGG - chr8_3:58293863-58293882 None:intergenic 25.0%
! TATAACTTCAAGAGATTTAG+AGG + chr8_3:58294042-58294061 Msa1297750:CDS 25.0%
!!! TATTTTGAAACTGGAAATAG+TGG - chr8_3:58294236-58294255 None:intergenic 25.0%
! TATTATGAATAAGAGAAGGA+AGG + chr8_3:58294910-58294929 Msa1297750:three_prime_UTR 25.0%
! ATTATGAATAAGAGAAGGAA+GGG + chr8_3:58294911-58294930 Msa1297750:three_prime_UTR 25.0%
! ATAAACTGAAAATCTTAGTC+AGG - chr8_3:58295027-58295046 None:intergenic 25.0%
!!! AAGAGACAATGATAGTTTTA+GGG + chr8_3:58295098-58295117 Msa1297750:three_prime_UTR 25.0%
! AAAAAATGAAAGAAGGAACA+AGG - chr8_3:58295139-58295158 None:intergenic 25.0%
TCATTAAATCTCCTTGTCTT+CGG + chr8_3:58289086-58289105 Msa1297750:CDS 30.0%
! GGATGGATATATCTGTATTT+TGG - chr8_3:58289309-58289328 None:intergenic 30.0%
TACAGATATATCCATCCTAT+TGG + chr8_3:58289312-58289331 Msa1297750:intron 30.0%
GTGTTAAAAAATTTGTGCAG+GGG + chr8_3:58289517-58289536 Msa1297750:intron 30.0%
! GTGGATTAAGGTTTAAAGTT+AGG + chr8_3:58290111-58290130 Msa1297750:intron 30.0%
!! TGTTACTTAGAGGTCAATTT+TGG + chr8_3:58290144-58290163 Msa1297750:intron 30.0%
ATAGGATTATAAAAGAGTCG+TGG + chr8_3:58290425-58290444 Msa1297750:intron 30.0%
TATTCAATAATAGCTGGACA+AGG - chr8_3:58290481-58290500 None:intergenic 30.0%
TATGCAATGCAATTAATCTG+TGG + chr8_3:58290499-58290518 Msa1297750:intron 30.0%
! TCTTATTTGCAATTACGTGT+CGG - chr8_3:58290947-58290966 None:intergenic 30.0%
AATAAGATTAACCATGACGT+AGG + chr8_3:58290960-58290979 Msa1297750:intron 30.0%
!!! CTTTTAGATTTTTTTGGTCG+TGG + chr8_3:58291570-58291589 Msa1297750:intron 30.0%
GTATTTACAATTGGTCGATA+CGG - chr8_3:58291905-58291924 None:intergenic 30.0%
AACTAAGATATCAAAGGTGA+AGG + chr8_3:58291971-58291990 Msa1297750:intron 30.0%
CTTTCCTAAGTGATTCTTAT+TGG + chr8_3:58292816-58292835 Msa1297750:CDS 30.0%
TTCCTAAGTGATTCTTATTG+GGG + chr8_3:58292818-58292837 Msa1297750:CDS 30.0%
AAAACATGTGCTATCTTTCA+AGG + chr8_3:58292848-58292867 Msa1297750:CDS 30.0%
GAAATGGAAAACTTGAATGT+GGG + chr8_3:58293041-58293060 Msa1297750:CDS 30.0%
AAATGGAAAACTTGAATGTG+GGG + chr8_3:58293042-58293061 Msa1297750:CDS 30.0%
! GAACATTCAAGTTTGGAAAT+GGG + chr8_3:58293064-58293083 Msa1297750:CDS 30.0%
AAAGGAGAGTTATTCAAAAG+TGG + chr8_3:58293186-58293205 Msa1297750:CDS 30.0%
TATAGACACTTTAAACCTTG+TGG + chr8_3:58293370-58293389 Msa1297750:CDS 30.0%
CCTGCAATATAGATGATAAA+TGG - chr8_3:58294002-58294021 None:intergenic 30.0%
CCATTTATCATCTATATTGC+AGG + chr8_3:58293999-58294018 Msa1297750:intron 30.0%
! TCATCTATATTGCAGGTTTT+TGG + chr8_3:58294006-58294025 Msa1297750:intron 30.0%
!! TATATTGCAGGTTTTTGGAT+AGG + chr8_3:58294011-58294030 Msa1297750:intron 30.0%
!! ATATTGCAGGTTTTTGGATA+GGG + chr8_3:58294012-58294031 Msa1297750:intron 30.0%
TAATAGGACAAAGATACCAT+GGG - chr8_3:58294090-58294109 None:intergenic 30.0%
ACTTCTTCAACTTGAGTAAT+AGG - chr8_3:58294106-58294125 None:intergenic 30.0%
TACTAAGACTTCTTCCAATT+TGG + chr8_3:58294134-58294153 Msa1297750:CDS 30.0%
ATTATTGTGCAAAGCCAAAT+TGG - chr8_3:58294151-58294170 None:intergenic 30.0%
ACTCAAAAAAACAAGTTCCA+AGG + chr8_3:58294345-58294364 Msa1297750:CDS 30.0%
CTCAAAAAAACAAGTTCCAA+GGG + chr8_3:58294346-58294365 Msa1297750:CDS 30.0%
!! TCTGAGGTTTTTATGTATGT+AGG + chr8_3:58294532-58294551 Msa1297750:CDS 30.0%
ATGTTAACACTTCTCCATAT+TGG - chr8_3:58294886-58294905 None:intergenic 30.0%
AGTACTAGAAGAAAATGTGA+TGG + chr8_3:58294938-58294957 Msa1297750:three_prime_UTR 30.0%
TAGAAGAAAATGTGATGGTT+TGG + chr8_3:58294943-58294962 Msa1297750:three_prime_UTR 30.0%
TTAAAGAGACTCAGGTAAAA+AGG - chr8_3:58294981-58295000 None:intergenic 30.0%
ACGTTCAATTTATACAACCA+TGG - chr8_3:58295074-58295093 None:intergenic 30.0%
! GAAGAGACAATGATAGTTTT+AGG + chr8_3:58295097-58295116 Msa1297750:three_prime_UTR 30.0%
TAATGATGAAACAGAGTGTG+TGG - chr8_3:58289072-58289091 None:intergenic 35.0%
! GAGGAAGATTGTTGTTGATT+TGG - chr8_3:58289119-58289138 None:intergenic 35.0%
TGAGAAAAATGATGAAGCAG+AGG - chr8_3:58289138-58289157 None:intergenic 35.0%
TGAAACTTTGACATCACCAA+TGG + chr8_3:58289181-58289200 Msa1297750:CDS 35.0%
!!! TTGTTTTGGTGAGTTCCAAT+AGG - chr8_3:58289330-58289349 None:intergenic 35.0%
CGTGAGTGATCAACATAATT+TGG - chr8_3:58289380-58289399 None:intergenic 35.0%
!! AGTTTTTGAGCATGCACTTA+CGG + chr8_3:58289410-58289429 Msa1297750:intron 35.0%
ACAGAAGAGTTAACTCTTGA+TGG + chr8_3:58289555-58289574 Msa1297750:CDS 35.0%
CAGAAGAGTTAACTCTTGAT+GGG + chr8_3:58289556-58289575 Msa1297750:CDS 35.0%
!!! TGATCATAGTTTTGTGATCG+CGG + chr8_3:58289807-58289826 Msa1297750:intron 35.0%
! CATTTTTATGAGTCCATGTG+TGG + chr8_3:58290043-58290062 Msa1297750:intron 35.0%
!! AGATGAATTTTGAGTGTGCA+CGG + chr8_3:58290369-58290388 Msa1297750:intron 35.0%
CAAGGTTCTTGAATCTTCTA+CGG - chr8_3:58290463-58290482 None:intergenic 35.0%
CTGAATCCTTATAAAACGAC+AGG + chr8_3:58290836-58290855 Msa1297750:intron 35.0%
!!! TTGTCTCCTGTCGTTTTATA+AGG - chr8_3:58290845-58290864 None:intergenic 35.0%
AACGACAGGAGACAAAAAAT+AGG + chr8_3:58290850-58290869 Msa1297750:intron 35.0%
ATAAGCCACAATCTCATGTA+AGG + chr8_3:58291218-58291237 Msa1297750:intron 35.0%
GGTTAAGAATATGGTAGGTT+AGG + chr8_3:58291261-58291280 Msa1297750:intron 35.0%
!! GTCTCGAGAGTATTTACAAT+TGG - chr8_3:58291914-58291933 None:intergenic 35.0%
!! TAGTTCTGGACCTAACTAAT+AGG - chr8_3:58291956-58291975 None:intergenic 35.0%
GTCCAGAACTAAGATATCAA+AGG + chr8_3:58291965-58291984 Msa1297750:intron 35.0%
CACCTTTGATATCTTAGTTC+TGG - chr8_3:58291970-58291989 None:intergenic 35.0%
AAAGGTGAAGGACAGTTTAA+AGG + chr8_3:58291983-58292002 Msa1297750:intron 35.0%
TATCAGAGTCATACATAGGT+AGG + chr8_3:58292021-58292040 Msa1297750:intron 35.0%
AAAAAGTTCATAGGTGTTCG+TGG + chr8_3:58292469-58292488 Msa1297750:intron 35.0%
AAAAGTTCATAGGTGTTCGT+GGG + chr8_3:58292470-58292489 Msa1297750:intron 35.0%
TTTAATCTACCAGTGAACCA+AGG + chr8_3:58292653-58292672 Msa1297750:intron 35.0%
GTTTACATCTTCTCTCTTGT+TGG + chr8_3:58292791-58292810 Msa1297750:CDS 35.0%
TTCCCCAATAAGAATCACTT+AGG - chr8_3:58292823-58292842 None:intergenic 35.0%
CAAAGCAAGGTATGTTGTAA+CGG - chr8_3:58293002-58293021 None:intergenic 35.0%
GGAAATGGAAAACTTGAATG+TGG + chr8_3:58293040-58293059 Msa1297750:CDS 35.0%
! GGAACATTCAAGTTTGGAAA+TGG + chr8_3:58293063-58293082 Msa1297750:CDS 35.0%
AGGCAATCAGATAGATTGAT+AGG - chr8_3:58293099-58293118 None:intergenic 35.0%
TCAATCTATCTGATTGCCTT+AGG + chr8_3:58293100-58293119 Msa1297750:CDS 35.0%
TATCTGATTGCCTTAGGAAA+TGG + chr8_3:58293106-58293125 Msa1297750:CDS 35.0%
CAACCAAACATTGCAACATT+TGG + chr8_3:58293136-58293155 Msa1297750:CDS 35.0%
TTGAGTGATCCTCATCAAAT+TGG - chr8_3:58293168-58293187 None:intergenic 35.0%
ATTTGATGAGGATCACTCAA+AGG + chr8_3:58293168-58293187 Msa1297750:CDS 35.0%
!! TTTTACTTGGCATTGAACCT+TGG + chr8_3:58293223-58293242 Msa1297750:CDS 35.0%
TGTTTGAGAAAAGTGAACCA+AGG - chr8_3:58293243-58293262 None:intergenic 35.0%
!! TTGGGCTATTTTGAAGATGA+AGG + chr8_3:58293268-58293287 Msa1297750:CDS 35.0%
! AAAAAGTACAAGGGCCAAAA+AGG - chr8_3:58293332-58293351 None:intergenic 35.0%
! GCCAACAAGAAAAAGTACAA+GGG - chr8_3:58293341-58293360 None:intergenic 35.0%
! TGCCAACAAGAAAAAGTACA+AGG - chr8_3:58293342-58293361 None:intergenic 35.0%
TTGAAGCAGCAAAAAACACT+TGG - chr8_3:58293417-58293436 None:intergenic 35.0%
!!! AAGTGTTTTTTGCTGCTTCA+AGG + chr8_3:58293416-58293435 Msa1297750:CDS 35.0%
! TTTGCTGCTTCAAGGAAATT+AGG + chr8_3:58293424-58293443 Msa1297750:CDS 35.0%
GGAGTTCAAATGACATCAAA+TGG + chr8_3:58293445-58293464 Msa1297750:CDS 35.0%
CTTGTATGTCACAGATGAAA+AGG + chr8_3:58293474-58293493 Msa1297750:CDS 35.0%
GTTTACACTTCATAACTCTG+AGG + chr8_3:58293581-58293600 Msa1297750:intron 35.0%
! CGACATAATGGTTTTTGATG+TGG - chr8_3:58293804-58293823 None:intergenic 35.0%
CATCAAAAACCATTATGTCG+TGG + chr8_3:58293804-58293823 Msa1297750:intron 35.0%
AGAGATTTAGAGGTCCAAAA+AGG + chr8_3:58294052-58294071 Msa1297750:CDS 35.0%
! AAAGATACCATGGGTTATGT+TGG - chr8_3:58294081-58294100 None:intergenic 35.0%
GTAATAGGACAAAGATACCA+TGG - chr8_3:58294091-58294110 None:intergenic 35.0%
! CTCAGTAGTTTTCACTCAAA+TGG + chr8_3:58294174-58294193 Msa1297750:CDS 35.0%
! TCAAATGGCTTCTCTTTTTG+TGG + chr8_3:58294189-58294208 Msa1297750:CDS 35.0%
! GGAAATAGTGGTTTTCATTG+CGG - chr8_3:58294224-58294243 None:intergenic 35.0%
ACGGTAGAAGAAAATGAAGA+TGG - chr8_3:58294299-58294318 None:intergenic 35.0%
!!! TTTTTGAGTTTTCCGACAAG+TGG - chr8_3:58294334-58294353 None:intergenic 35.0%
ACTCACTGAACTTCAAAGAA+TGG + chr8_3:58294369-58294388 Msa1297750:CDS 35.0%
CTCACTGAACTTCAAAGAAT+GGG + chr8_3:58294370-58294389 Msa1297750:CDS 35.0%
GAACTTCAAAGAATGGGAAT+CGG + chr8_3:58294376-58294395 Msa1297750:CDS 35.0%
CGTTATAGCTATAATCGCAA+TGG + chr8_3:58294402-58294421 Msa1297750:CDS 35.0%
! CTGGAATAGTGGAATGTTAT+AGG + chr8_3:58294431-58294450 Msa1297750:CDS 35.0%
AGGCTTAAGTATGCAAAACA+AGG + chr8_3:58294451-58294470 Msa1297750:CDS 35.0%
AAACTTGAATAGAGGTCACT+TGG + chr8_3:58294717-58294736 Msa1297750:CDS 35.0%
! GGATAGGTTTTTCTTCCTAT+TGG + chr8_3:58294738-58294757 Msa1297750:CDS 35.0%
AAGAAGTCAAAACAGCCAAT+AGG - chr8_3:58294756-58294775 None:intergenic 35.0%
CTTATATTGCATGTGCAAAG+TGG + chr8_3:58294788-58294807 Msa1297750:CDS 35.0%
GTGGTTTCAGAATATTCAGA+TGG + chr8_3:58294807-58294826 Msa1297750:CDS 35.0%
GATTATACTTTGCAGCTACT+AGG - chr8_3:58294859-58294878 None:intergenic 35.0%
GAATACAGTTAAAGAGACTC+AGG - chr8_3:58294989-58295008 None:intergenic 35.0%
GAAATTCATGGTTGTATCCA+TGG + chr8_3:58295054-58295073 Msa1297750:three_prime_UTR 35.0%
GTAAGTTCCATTGCTAATGA+TGG + chr8_3:58295159-58295178 Msa1297750:three_prime_UTR 35.0%
AACATGTCCATCATTAGCAA+TGG - chr8_3:58295169-58295188 None:intergenic 35.0%
TTTGGTGAGTTCCAATAGGA+TGG - chr8_3:58289326-58289345 None:intergenic 40.0%
!! TCGCAACTAGTGTTACTTAG+AGG + chr8_3:58290134-58290153 Msa1297750:intron 40.0%
!! GATGAATTTTGAGTGTGCAC+GGG + chr8_3:58290370-58290389 Msa1297750:intron 40.0%
!! ATGAATTTTGAGTGTGCACG+GGG + chr8_3:58290371-58290390 Msa1297750:intron 40.0%
! TGATTCTTACTCGACCGTTT+TGG + chr8_3:58290758-58290777 Msa1297750:intron 40.0%
AGTGTATGCATCATAACACG+TGG - chr8_3:58290992-58291011 None:intergenic 40.0%
TACTTATGGACATGAGTGCA+AGG + chr8_3:58291018-58291037 Msa1297750:intron 40.0%
!! ACTAGCCTTACATGAGATTG+TGG - chr8_3:58291226-58291245 None:intergenic 40.0%
ATCTCATGTAAGGCTAGTGA+AGG + chr8_3:58291228-58291247 Msa1297750:intron 40.0%
GCTAGTGAAGGTCAACAATA+AGG + chr8_3:58291240-58291259 Msa1297750:intron 40.0%
GGTTAGGATAGACTTTCGTA+AGG + chr8_3:58291277-58291296 Msa1297750:intron 40.0%
CTAACAAATCACCACTTGAG+TGG - chr8_3:58291481-58291500 None:intergenic 40.0%
!!! GATTTTTTTGGTCGTGGTCA+TGG + chr8_3:58291576-58291595 Msa1297750:intron 40.0%
TCAACTGAGTTAAGCTCACA+AGG + chr8_3:58291640-58291659 Msa1297750:intron 40.0%
GACGTATCAGAGTCATACAT+AGG + chr8_3:58292017-58292036 Msa1297750:intron 40.0%
! TTTTCTTTGCACACGCGAAA+AGG - chr8_3:58292058-58292077 None:intergenic 40.0%
TACATACATGTGCTCAAGTG+CGG + chr8_3:58292108-58292127 Msa1297750:intron 40.0%
CTAGCAACCTTAGCATTCTT+TGG + chr8_3:58292677-58292696 Msa1297750:CDS 40.0%
!! ACCTTAGCATTCTTTGGAGT+TGG + chr8_3:58292683-58292702 Msa1297750:CDS 40.0%
TCCAACTCCAAAGAATGCTA+AGG - chr8_3:58292687-58292706 None:intergenic 40.0%
CTGCTAACAATGTTAGCAAG+TGG + chr8_3:58292759-58292778 Msa1297750:CDS 40.0%
AACAATGTTAGCAAGTGGAC+TGG + chr8_3:58292764-58292783 Msa1297750:CDS 40.0%
! ATGTGGGGAACATTCAAGTT+TGG + chr8_3:58293057-58293076 Msa1297750:CDS 40.0%
TGATTGCCTTAGGAAATGGA+GGG + chr8_3:58293110-58293129 Msa1297750:CDS 40.0%
TTGATACCCTCCATTTCCTA+AGG - chr8_3:58293119-58293138 None:intergenic 40.0%
GCACCAAATGTTGCAATGTT+TGG - chr8_3:58293142-58293161 None:intergenic 40.0%
ATGAAGGATTATGGGCTCTT+GGG + chr8_3:58293284-58293303 Msa1297750:CDS 40.0%
! ATTATGGGCTCTTGGGTTTT+GGG + chr8_3:58293291-58293310 Msa1297750:CDS 40.0%
!!! GCCCTTGTACTTTTTCTTGT+TGG + chr8_3:58293337-58293356 Msa1297750:CDS 40.0%
ACTTGGCAGAATCTTGAAAG+AGG - chr8_3:58293400-58293419 None:intergenic 40.0%
TGTGTGGAGAATCTTTCTGT+TGG - chr8_3:58293515-58293534 None:intergenic 40.0%
AGAAAGATTCTCCACACACA+CGG + chr8_3:58293517-58293536 Msa1297750:CDS 40.0%
CCACATTTGAAAGGGACTTT+CGG - chr8_3:58293754-58293773 None:intergenic 40.0%
CAATCTTGACCACGACATAA+TGG - chr8_3:58293816-58293835 None:intergenic 40.0%
TTATGTCGTGGTCAAGATTG+TGG + chr8_3:58293816-58293835 Msa1297750:intron 40.0%
CTTCGGAAAATAATGAGACG+TGG + chr8_3:58293888-58293907 Msa1297750:intron 40.0%
GATTTAGAGGTCCAAAAAGG+AGG + chr8_3:58294055-58294074 Msa1297750:CDS 40.0%
!!! TGCTGGTGGTATTTTGAAAC+TGG - chr8_3:58294245-58294264 None:intergenic 40.0%
ATAATCGCAATGGTTACAGC+TGG + chr8_3:58294412-58294431 Msa1297750:CDS 40.0%
AATGGTTACAGCTGGAATAG+TGG + chr8_3:58294420-58294439 Msa1297750:CDS 40.0%
CAAGCTCTCTAAGTATCTTC+TGG + chr8_3:58294479-58294498 Msa1297750:CDS 40.0%
ATTCCCCAGTATGCACTTAT+AGG + chr8_3:58294505-58294524 Msa1297750:CDS 40.0%
AGCTCCTATAAGTGCATACT+GGG - chr8_3:58294512-58294531 None:intergenic 40.0%
AAGCTCCTATAAGTGCATAC+TGG - chr8_3:58294513-58294532 None:intergenic 40.0%
TTCAATGCTCAAACACCTGA+TGG + chr8_3:58294568-58294587 Msa1297750:CDS 40.0%
CCAAAGCTCTTTAATCCATC+AGG - chr8_3:58294586-58294605 None:intergenic 40.0%
!! CCTGATGGATTAAAGAGCTT+TGG + chr8_3:58294583-58294602 Msa1297750:CDS 40.0%
TGCATGACAAGTATCTCACT+TGG + chr8_3:58294616-58294635 Msa1297750:CDS 40.0%
GCATGACAAGTATCTCACTT+GGG + chr8_3:58294617-58294636 Msa1297750:CDS 40.0%
ATCCCTGGAAACTTGAATAG+AGG + chr8_3:58294709-58294728 Msa1297750:CDS 40.0%
! GACCTCTATTCAAGTTTCCA+GGG - chr8_3:58294714-58294733 None:intergenic 40.0%
! TGACCTCTATTCAAGTTTCC+AGG - chr8_3:58294715-58294734 None:intergenic 40.0%
TGAATAGAGGTCACTTGGAT+AGG + chr8_3:58294722-58294741 Msa1297750:CDS 40.0%
!!! ATAGTTTTAGGGCCTCTCTT+GGG + chr8_3:58295109-58295128 Msa1297750:three_prime_UTR 40.0%
TTGGATGAAAGCCGAAGACA+AGG - chr8_3:58289100-58289119 None:intergenic 45.0%
!! ATCACCAATGGCTTGCTTAG+AGG + chr8_3:58289193-58289212 Msa1297750:CDS 45.0%
TTGCTTAGAGGTCTGCAAAG+AGG + chr8_3:58289205-58289224 Msa1297750:CDS 45.0%
!! CTCTTGATGGGAGTGTTGAT+TGG + chr8_3:58289568-58289587 Msa1297750:CDS 45.0%
!! CAGATTTGGCTCTGTTTGCT+GGG - chr8_3:58289602-58289621 None:intergenic 45.0%
CAGCAAACAGAGCCAAATCT+GGG + chr8_3:58289601-58289620 Msa1297750:CDS 45.0%
AGCAAACCATCTCCCAGATT+TGG - chr8_3:58289616-58289635 None:intergenic 45.0%
! AAATCTGGGAGATGGTTTGC+TGG + chr8_3:58289615-58289634 Msa1297750:CDS 45.0%
!! TGAATTTTGAGTGTGCACGG+GGG + chr8_3:58290372-58290391 Msa1297750:intron 45.0%
TAAGCTTTGCACCACTCAAG+TGG + chr8_3:58291467-58291486 Msa1297750:intron 45.0%
TTTGCACACGCGAAAAGGTT+CGG - chr8_3:58292053-58292072 None:intergenic 45.0%
ATGCTAAGGTTGCTAGACCT+TGG - chr8_3:58292673-58292692 None:intergenic 45.0%
!! ACCTAGTTCTGTTCCTGACA+AGG + chr8_3:58292711-58292730 Msa1297750:CDS 45.0%
!! CCTAGTTCTGTTCCTGACAA+GGG + chr8_3:58292712-58292731 Msa1297750:CDS 45.0%
CTGATTGCCTTAGGAAATGG+AGG + chr8_3:58293109-58293128 Msa1297750:CDS 45.0%
!! TGGTGCTGACCAATTTGATG+AGG + chr8_3:58293156-58293175 Msa1297750:CDS 45.0%
GATGAAGGATTATGGGCTCT+TGG + chr8_3:58293283-58293302 Msa1297750:CDS 45.0%
! GATTATGGGCTCTTGGGTTT+TGG + chr8_3:58293290-58293309 Msa1297750:CDS 45.0%
CTTGAAAGAGGATTGCCACA+AGG - chr8_3:58293388-58293407 None:intergenic 45.0%
CCGAAAGTCCCTTTCAAATG+TGG + chr8_3:58293751-58293770 Msa1297750:intron 45.0%
CTCATCGGCCACATTTGAAA+GGG - chr8_3:58293762-58293781 None:intergenic 45.0%
AACCACAATGTAGGCCTCAT+CGG - chr8_3:58293777-58293796 None:intergenic 45.0%
ATGAGGCCTACATTGTGGTT+TGG + chr8_3:58293777-58293796 Msa1297750:intron 45.0%
TGTGGTCCAAACCACAATGT+AGG - chr8_3:58293786-58293805 None:intergenic 45.0%
!! GGTTATGTTGGCCTCCTTTT+TGG - chr8_3:58294069-58294088 None:intergenic 45.0%
! GCTTCTCTTTTTGTGGAGCA+AGG + chr8_3:58294196-58294215 Msa1297750:CDS 45.0%
AAATGAAGATGGCTACGCTG+AGG - chr8_3:58294288-58294307 None:intergenic 45.0%
CAAGTGGATCAAGTACTCGA+CGG - chr8_3:58294318-58294337 None:intergenic 45.0%
CGAGTACTTGATCCACTTGT+CGG + chr8_3:58294319-58294338 Msa1297750:CDS 45.0%
TTGAAGTTCAGTGAGTCCCT+TGG - chr8_3:58294365-58294384 None:intergenic 45.0%
GCTCCTATAAGTGCATACTG+GGG - chr8_3:58294511-58294530 None:intergenic 45.0%
TGCACTTATAGGAGCTTCTG+AGG + chr8_3:58294516-58294535 Msa1297750:CDS 45.0%
TCAACTGAAGATCACATGCC+AGG + chr8_3:58294682-58294701 Msa1297750:CDS 45.0%
!!! GATAGTTTTAGGGCCTCTCT+TGG + chr8_3:58295108-58295127 Msa1297750:three_prime_UTR 45.0%
!! TTATAATATTAAAATGTTTA+TGG + chr8_3:58291719-58291738 Msa1297750:intron 5.0%
!! TATAATATTAAAATGTTTAT+GGG + chr8_3:58291720-58291739 Msa1297750:intron 5.0%
!! TTATAAAAACAAATAAATTT+AGG + chr8_3:58292141-58292160 Msa1297750:intron 5.0%
!! AAAAAAAAAAAAATAATGTA+TGG + chr8_3:58292523-58292542 Msa1297750:intron 5.0%
CAGACCTCTAAGCAAGCCAT+TGG - chr8_3:58289200-58289219 None:intergenic 50.0%
!! GATGGGAGTGTTGATTGGCA+TGG + chr8_3:58289573-58289592 Msa1297750:CDS 50.0%
!! CCAGATTTGGCTCTGTTTGC+TGG - chr8_3:58289603-58289622 None:intergenic 50.0%
CCAGCAAACAGAGCCAAATC+TGG + chr8_3:58289600-58289619 Msa1297750:CDS 50.0%
ACAGAGCCAAATCTGGGAGA+TGG + chr8_3:58289607-58289626 Msa1297750:CDS 50.0%
GGACACACTTATGCCACACA+TGG - chr8_3:58290059-58290078 None:intergenic 50.0%
CGTGGCAAATACCTACGTCA+TGG - chr8_3:58290974-58290993 None:intergenic 50.0%
CAATTGGTCGATACGGCCAA+AGG - chr8_3:58291898-58291917 None:intergenic 50.0%
GTTGCTAGACCTTGGTTCAC+TGG - chr8_3:58292665-58292684 None:intergenic 50.0%
CCCTTGTCAGGAACAGAACT+AGG - chr8_3:58292715-58292734 None:intergenic 50.0%
! TCTGTTCCTGACAAGGGTGT+TGG + chr8_3:58292718-58292737 Msa1297750:CDS 50.0%
!! CTGTTCCTGACAAGGGTGTT+GGG + chr8_3:58292719-58292738 Msa1297750:CDS 50.0%
!!! TTGGGTTTTGGGCTTCTGCT+GGG + chr8_3:58293302-58293321 Msa1297750:CDS 50.0%
! TTCTGCTGGGTCTGCCTTTT+TGG + chr8_3:58293315-58293334 Msa1297750:CDS 50.0%
CTTACTTGAAGCCGTGTGTG+TGG - chr8_3:58293531-58293550 None:intergenic 50.0%
CCTCATCGGCCACATTTGAA+AGG - chr8_3:58293763-58293782 None:intergenic 50.0%
CCTTTCAAATGTGGCCGATG+AGG + chr8_3:58293760-58293779 Msa1297750:intron 50.0%
AAGGAGGCCAACATAACCCA+TGG + chr8_3:58294071-58294090 Msa1297750:CDS 50.0%
! AAGCTAGACATGCTTGCTGG+TGG - chr8_3:58294259-58294278 None:intergenic 50.0%
TCGAAGCTAGACATGCTTGC+TGG - chr8_3:58294262-58294281 None:intergenic 50.0%
CTGAAGATCACATGCCAGGA+TGG + chr8_3:58294686-58294705 Msa1297750:CDS 50.0%
AAGTTTCCAGGGATCCATCC+TGG - chr8_3:58294703-58294722 None:intergenic 50.0%
GAACAAGGAAGACCCAAGAG+AGG - chr8_3:58295124-58295143 None:intergenic 50.0%
CTTGACCCAACACCCTTGTC+AGG - chr8_3:58292727-58292746 None:intergenic 55.0%
!!! CTTGGGTTTTGGGCTTCTGC+TGG + chr8_3:58293301-58293320 Msa1297750:CDS 55.0%
GGCCGATGAGGCCTACATTG+TGG + chr8_3:58293772-58293791 Msa1297750:intron 60.0%
CACATGCCAGGATGGATCCC+TGG + chr8_3:58294694-58294713 Msa1297750:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58289032 58295229 58289032 ID=Msa1297750;Name=Msa1297750
chr8_3 mRNA 58289032 58295229 58289032 ID=Msa1297750-mRNA-1;Parent=Msa1297750;Name=Msa1297750-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.8|1|1|1|5|353|648
chr8_3 exon 58289032 58289226 58289032 ID=Msa1297750-mRNA-1:exon:16690;Parent=Msa1297750-mRNA-1
chr8_3 exon 58289537 58289651 58289537 ID=Msa1297750-mRNA-1:exon:16691;Parent=Msa1297750-mRNA-1
chr8_3 exon 58292666 58292883 58292666 ID=Msa1297750-mRNA-1:exon:16692;Parent=Msa1297750-mRNA-1
chr8_3 exon 58292983 58293545 58292983 ID=Msa1297750-mRNA-1:exon:16693;Parent=Msa1297750-mRNA-1
chr8_3 exon 58294021 58295229 58294021 ID=Msa1297750-mRNA-1:exon:16694;Parent=Msa1297750-mRNA-1
chr8_3 CDS 58289032 58289226 58289032 ID=Msa1297750-mRNA-1:cds;Parent=Msa1297750-mRNA-1
chr8_3 CDS 58289537 58289651 58289537 ID=Msa1297750-mRNA-1:cds;Parent=Msa1297750-mRNA-1
chr8_3 CDS 58292666 58292883 58292666 ID=Msa1297750-mRNA-1:cds;Parent=Msa1297750-mRNA-1
chr8_3 CDS 58292983 58293545 58292983 ID=Msa1297750-mRNA-1:cds;Parent=Msa1297750-mRNA-1
chr8_3 CDS 58294021 58294876 58294021 ID=Msa1297750-mRNA-1:cds;Parent=Msa1297750-mRNA-1
chr8_3 three_prime_UTR 58294877 58295229 58294877 ID=Msa1297750-mRNA-1:three_prime_utr;Parent=Msa1297750-mRNA-1
Gene Sequence

>Msa1297750

ATGCGATTCTTTATTCCTCTATATATAGTGAATACTTCCACACACTCTGTTTCATCATTAAATCTCCTTGTCTTCGGCTTTCATCCAAATCAACAACAATCTTCCTCTGCTTCATCATTTTTCTCACTCTTTTTCTTCCTTTTTGTCTTTGAAACTTTGACATCACCAATGGCTTGCTTAGAGGTCTGCAAAGAGGGGAAGTTCAAAGAAGAAACAGAAGAGTTAACTCTTGATGGGAGTGTTGATTGGCATGGTCGCCCAGCAAACAGAGCCAAATCTGGGAGATGGTTTGCTGGAACTATTATACTCTTGAACCAAGGTCTAGCAACCTTAGCATTCTTTGGAGTTGGAGTGAACCTAGTTCTGTTCCTGACAAGGGTGTTGGGTCAAGACAATGCTGCTGCTGCTAACAATGTTAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTTGGTGCTTTCCTAAGTGATTCTTATTGGGGAAGATACAAAACATGTGCTATCTTTCAAGGCATTTTTGTAACTGGTCTAGTATCTTTGTCCGTTACAACATACCTTGCTTTGCTTAGACCAAAAGGTTGTGGAAATGGAAAACTTGAATGTGGGGAACATTCAAGTTTGGAAATGGGAATGTTCTACCTATCAATCTATCTGATTGCCTTAGGAAATGGAGGGTATCAACCAAACATTGCAACATTTGGTGCTGACCAATTTGATGAGGATCACTCAAAGGAGAGTTATTCAAAAGTGGCATTTTTTAGCTACTTTTACTTGGCATTGAACCTTGGTTCACTTTTCTCAAACACTATTTTGGGCTATTTTGAAGATGAAGGATTATGGGCTCTTGGGTTTTGGGCTTCTGCTGGGTCTGCCTTTTTGGCCCTTGTACTTTTTCTTGTTGGCACCCCAAAATATAGACACTTTAAACCTTGTGGCAATCCTCTTTCAAGATTCTGCCAAGTGTTTTTTGCTGCTTCAAGGAAATTAGGAGTTCAAATGACATCAAATGGAGATGACTTGTATGTCACAGATGAAAAGGAATCTTCTAACAACTCCAACAGAAAGATTCTCCACACACACGGCTTCAAGTTTTTGGATAGGGCAGCTTATATAACTTCAAGAGATTTAGAGGTCCAAAAAGGAGGCCAACATAACCCATGGTATCTTTGTCCTATTACTCAAGTTGAAGAAGTAAAATGCATACTAAGACTTCTTCCAATTTGGCTTTGCACAATAATCTACTCAGTAGTTTTCACTCAAATGGCTTCTCTTTTTGTGGAGCAAGGCGCCGCAATGAAAACCACTATTTCCAGTTTCAAAATACCACCAGCAAGCATGTCTAGCTTCGACATCCTCAGCGTAGCCATCTTCATTTTCTTCTACCGTCGAGTACTTGATCCACTTGTCGGAAAACTCAAAAAAACAAGTTCCAAGGGACTCACTGAACTTCAAAGAATGGGAATCGGTCTCGTTATAGCTATAATCGCAATGGTTACAGCTGGAATAGTGGAATGTTATAGGCTTAAGTATGCAAAACAAGGTGACGCAAGCTCTCTAAGTATCTTCTGGCAAATTCCCCAGTATGCACTTATAGGAGCTTCTGAGGTTTTTATGTATGTAGGACAATTAGAATTCTTCAATGCTCAAACACCTGATGGATTAAAGAGCTTTGGAAGTGCACTTTGCATGACAAGTATCTCACTTGGGAACTATGTGAGTAGCTTAATTGTTAGTATTGTTATGAAGATTTCAACTGAAGATCACATGCCAGGATGGATCCCTGGAAACTTGAATAGAGGTCACTTGGATAGGTTTTTCTTCCTATTGGCTGTTTTGACTTCTTTAGATTTGATTGCTTATATTGCATGTGCAAAGTGGTTTCAGAATATTCAGATGGAATGCAAATATGATAACAATGATGAGCCTAGTAGCTGCAAAGTATAA
Protein sequence

>Msa1297750

MRFFIPLYIVNTSTHSVSSLNLLVFGFHPNQQQSSSASSFFSLFFFLFVFETLTSPMACLEVCKEGKFKEETEELTLDGSVDWHGRPANRAKSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLVSLSVTTYLALLRPKGCGNGKLECGEHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEDHSKESYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFLALVLFLVGTPKYRHFKPCGNPLSRFCQVFFAASRKLGVQMTSNGDDLYVTDEKESSNNSNRKILHTHGFKFLDRAAYITSRDLEVQKGGQHNPWYLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISSFKIPPASMSSFDILSVAIFIFFYRRVLDPLVGKLKKTSSKGLTELQRMGIGLVIAIIAMVTAGIVECYRLKYAKQGDASSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFFFLLAVLTSLDLIAYIACAKWFQNIQMECKYDNNDEPSSCKV*