AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1348830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348830 MtrunA17_Chr4g0047611 98.017 958 18 1 1 957 1 958 0.0 1947
Msa1348830 MtrunA17_Chr7g0241931 44.298 833 402 16 3 823 7 789 0.0 644
Msa1348830 MtrunA17_Chr4g0047581 66.957 115 33 1 848 957 48 162 6.17e-40 145
Msa1348830 MtrunA17_Chr4g0047581 64.000 100 31 2 96 192 11 108 9.26e-34 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348830 AT4G21670.1 59.446 974 349 18 6 949 9 966 0.0 1094
Msa1348830 AT5G01270.2 46.272 778 354 18 2 772 6 726 0.0 618
Msa1348830 AT5G01270.1 46.272 778 354 18 2 772 6 726 0.0 618

Find 313 sgRNAs with CRISPR-Local

Find 748 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCACAAATTGATTGAATT+AGG 0.152694 tig0010571:-30775 Msa1348830:five_prime_UTR
TTGATGTTGTTGTTCACTTC+TGG 0.157253 tig0010571:+30460 None:intergenic
GTAGATCCACAACGAATTTC+TGG 0.226615 tig0010571:-29250 Msa1348830:CDS
TACTACTGTTTGCTTCAAAA+TGG 0.232751 tig0010571:-30341 Msa1348830:CDS
AGAAGCCTTCGCCTTGTATC+TGG 0.233500 tig0010571:+26460 None:intergenic
CCTAGTTATCATTCGTTATC+TGG 0.234840 tig0010571:-25994 Msa1348830:intron
TATGTGAATCAGGCCATTTC+AGG 0.240267 tig0010571:-21928 Msa1348830:intron
TTTCATCTAATCATCATAAT+TGG 0.242489 tig0010571:+30594 None:intergenic
CCGTATCAGCGGTCGAACTA+TGG 0.244363 tig0010571:+29087 None:intergenic
GAAATGTTGCTTGCAATGTT+AGG 0.247371 tig0010571:-27543 Msa1348830:CDS
GCCATCAACCTTAGAGAAAA+AGG 0.251095 tig0010571:+26210 None:intergenic
GTTAATAACGGAGTCTTTAG+AGG 0.252728 tig0010571:+21275 None:intergenic
TTCTCTTGTCAAGGGATTGC+TGG 0.258532 tig0010571:+21822 None:intergenic
GTGATTAGGGTTTGAAGATT+GGG 0.260752 tig0010571:+30844 None:intergenic
ATGACGACAGACCATGTTTC+TGG 0.264090 tig0010571:-29435 Msa1348830:CDS
TTGAATTGTAGTATTGATTA+GGG 0.274080 tig0010571:+30814 None:intergenic
ATTGAATTGTAGTATTGATT+AGG 0.275421 tig0010571:+30813 None:intergenic
TCAATTACTAACGCCATCTT+TGG 0.279396 tig0010571:+27806 None:intergenic
ATAAATTCAAAAGAACTATT+AGG 0.319906 tig0010571:-28476 Msa1348830:CDS
AAGGGTGGTGGCTGTTGGGT+TGG 0.322111 tig0010571:-21721 Msa1348830:three_prime_UTR
GGCACAAATTGATTGAATTA+GGG 0.322931 tig0010571:-30774 Msa1348830:five_prime_UTR
GAATTTATCAAATTTGAATC+TGG 0.323700 tig0010571:+28491 None:intergenic
TGATGTTGTTGTTCACTTCT+GGG 0.325901 tig0010571:+30461 None:intergenic
AATCAATTCTCAATTTCATT+AGG 0.329297 tig0010571:+21425 None:intergenic
CTGCAGCGATTCGCATCTTC+TGG 0.334001 tig0010571:-21864 Msa1348830:CDS
AACACCAGTTGCAGTATTAC+AGG 0.334968 tig0010571:-25393 Msa1348830:CDS
TTACTGGTATGACTGTTGTT+GGG 0.335148 tig0010571:-21780 Msa1348830:three_prime_UTR
AGGGTGGTGGCTGTTGGGTT+GGG 0.340617 tig0010571:-21720 Msa1348830:three_prime_UTR
TAACCGTTGTCATTTGCATT+AGG 0.342914 tig0010571:+23413 None:intergenic
GAGATAGATGGCCAGGTCTA+TGG 0.343135 tig0010571:-22502 Msa1348830:CDS
CTAGGATCTAAAACCCTTGA+TGG 0.345596 tig0010571:+23314 None:intergenic
TACAGGATTGGGGTGTCTAA+TGG 0.352012 tig0010571:+26381 None:intergenic
AAAGAAATGCTTGTAGATTC+TGG 0.352389 tig0010571:-26271 Msa1348830:CDS
TCAATATACTCTTGTCCTCT+TGG 0.366138 tig0010571:+29203 None:intergenic
TTGGAAGTGGCAAACGCATT+AGG 0.366521 tig0010571:-30971 None:intergenic
GGTGATTAGGGTTTGAAGAT+TGG 0.368207 tig0010571:+30843 None:intergenic
GAATCTACAAGCATTTCTTT+AGG 0.369862 tig0010571:+26274 None:intergenic
TAGAATGGAAGCGCGATATA+AGG 0.371179 tig0010571:-24669 Msa1348830:CDS
TGAGGATTCTATTAAACATT+TGG 0.371520 tig0010571:-24642 Msa1348830:CDS
ATCATAATTGGCGTCAAAAT+CGG 0.373641 tig0010571:+30606 None:intergenic
TCAATTTCATTAGGTTGGTT+TGG 0.375480 tig0010571:+21434 None:intergenic
TTACCTCCTTTGGCAATCTC+TGG 0.375894 tig0010571:+26152 None:intergenic
AACATAGTCATTACCTCCTT+TGG 0.376563 tig0010571:+26142 None:intergenic
GTATCAAGGGGAGGTGATGT+TGG 0.380357 tig0010571:-30500 Msa1348830:CDS
GTGGGTAATGTTAGTTCTCT+TGG 0.381089 tig0010571:-23389 Msa1348830:CDS
GCGGAAACTTGTACAGGATT+GGG 0.383466 tig0010571:+26370 None:intergenic
GTTGTTAAATCTCAGATGTT+TGG 0.383490 tig0010571:-29371 Msa1348830:CDS
CTCTTGAGCGATCATCTCTA+TGG 0.385081 tig0010571:+26031 None:intergenic
TTGTTAAATCTCAGATGTTT+GGG 0.385878 tig0010571:-29370 Msa1348830:CDS
GCAACCAATACTCCATTGAT+TGG 0.387056 tig0010571:+21541 None:intergenic
TGCAACATGGACAAGATGTT+AGG 0.391794 tig0010571:-26432 Msa1348830:CDS
AGTGATGGTGACGGCGATTT+GGG 0.393697 tig0010571:+30705 None:intergenic
TCAGCTTGAGGAGCATAGTA+TGG 0.395892 tig0010571:+27719 None:intergenic
GTAAGATAATCACATCTTGA+TGG 0.399089 tig0010571:-21566 Msa1348830:three_prime_UTR
TTGGATGGCATGAGCCATCT+TGG 0.400381 tig0010571:+27825 None:intergenic
TCTTTAGGTAGTACCCTGTT+TGG 0.400428 tig0010571:+26289 None:intergenic
AGTCTCTGCCCTCAAGGAAT+TGG 0.402177 tig0010571:-23264 Msa1348830:intron
GGTGGAATATACATCATCTT+TGG 0.404500 tig0010571:-25215 Msa1348830:CDS
CTTACTGGTATGACTGTTGT+TGG 0.405053 tig0010571:-21781 Msa1348830:three_prime_UTR
TCAATCGGAGATTCAAAATC+AGG 0.406496 tig0010571:-30795 Msa1348830:five_prime_UTR
TTTGGGTATAGTGTTTGATC+TGG 0.411621 tig0010571:-29353 Msa1348830:CDS
AATGTGGTGTTGTTCTATAT+TGG 0.412982 tig0010571:+21650 None:intergenic
AATGAGACTGCCTCCTCTTT+AGG 0.413517 tig0010571:+23353 None:intergenic
ATCTTTAATATCATCTTCAT+AGG 0.414639 tig0010571:+27132 None:intergenic
TTGGTTCACAACCACCAAAC+AGG 0.415555 tig0010571:-26303 Msa1348830:CDS
TGTGAAGGGTGGTGGCTGTT+GGG 0.416900 tig0010571:-21725 Msa1348830:three_prime_UTR
CAGTGCATGATGGAGGGTCT+TGG 0.420440 tig0010571:-23133 Msa1348830:CDS
ACAGCTGTTATGCCGATGTA+TGG 0.422975 tig0010571:-29493 Msa1348830:CDS
GTATGGGGAAGAATTACATT+TGG 0.426229 tig0010571:-29476 Msa1348830:CDS
CTGAAATAGAGGTGAGGTAC+TGG 0.427174 tig0010571:-21604 Msa1348830:three_prime_UTR
AGGGATCTTGACTCTGAATC+TGG 0.428657 tig0010571:-25437 Msa1348830:CDS
CGTTCTTCAGGCTGCTGAGA+AGG 0.433259 tig0010571:-22330 Msa1348830:intron
AATTCTCAATTTCATTAGGT+TGG 0.433928 tig0010571:+21429 None:intergenic
TTCTATATTGGCATTGAGCT+CGG 0.434917 tig0010571:+21662 None:intergenic
ACTAGATAATTGCTCACGTC+AGG 0.435489 tig0010571:+27097 None:intergenic
AAGTGATGGTGACGGCGATT+TGG 0.437027 tig0010571:+30704 None:intergenic
TATCAAGGGGAGGTGATGTT+GGG 0.438251 tig0010571:-30499 Msa1348830:CDS
TTGGAAGTTAAGAGATCAAC+GGG 0.440722 tig0010571:-23290 Msa1348830:CDS
TGACGACAGACCATGTTTCT+GGG 0.441838 tig0010571:-29434 Msa1348830:CDS
ACAGGATTGGGGTGTCTAAT+GGG 0.441847 tig0010571:+26382 None:intergenic
CCGACCCACTTAAGTTGAAA+TGG 0.442699 tig0010571:+21696 None:intergenic
TTGTTCAATGTCTTCCAAGA+TGG 0.444512 tig0010571:-27839 Msa1348830:CDS
AATCCCTTGACAAGAGAAAC+AGG 0.447003 tig0010571:-21817 Msa1348830:exon
AGCCTCGTCCCATGTTAATC+CGG 0.448078 tig0010571:+22471 None:intergenic
CCAGATAACGAATGATAACT+AGG 0.453366 tig0010571:+25994 None:intergenic
AGCGGAAACTTGTACAGGAT+TGG 0.454708 tig0010571:+26369 None:intergenic
TATGCAAGCTTGATTCTAAA+GGG 0.454773 tig0010571:+26530 None:intergenic
TTGGGGTGTCTAATGGGAAA+TGG 0.457675 tig0010571:+26388 None:intergenic
TATAAATCGGTGGTGTATCA+AGG 0.457860 tig0010571:-30514 Msa1348830:CDS
CAGCTGCATCAGATCCATCA+AGG 0.458170 tig0010571:-23328 Msa1348830:CDS
TGCACTGAAGTGTGGAACTA+AGG 0.458500 tig0010571:-25366 Msa1348830:intron
CGTATCAGCGGTCGAACTAT+GGG 0.458962 tig0010571:+29088 None:intergenic
GGAGAACTGCAGCTCTCTGC+TGG 0.459697 tig0010571:+25189 None:intergenic
TGGGACCATTTCAACTTAAG+TGG 0.460087 tig0010571:-21701 Msa1348830:three_prime_UTR
TGTTTGCACAATGGCTGAAA+GGG 0.461207 tig0010571:-28546 Msa1348830:CDS
GCAGGTGATGACATCCCCTT+TGG 0.462943 tig0010571:-25479 Msa1348830:intron
TTATTCGAGAATCCCTGAAA+TGG 0.464504 tig0010571:+21915 None:intergenic
TGAACTGAATTTGTTAACAT+TGG 0.465766 tig0010571:+23085 None:intergenic
CTGAAGAGAAGAAGTGAGCC+TGG 0.465866 tig0010571:+26672 None:intergenic
ATTTGGTTGCAATGCATTCA+CGG 0.466042 tig0010571:-29459 Msa1348830:CDS
TTAGGTTGAGATAGATGGCC+AGG 0.466392 tig0010571:-22509 Msa1348830:intron
TTAGGTAGTACCCTGTTTGG+TGG 0.466553 tig0010571:+26292 None:intergenic
TCTAACTTAGCAGTTGTCAT+AGG 0.466599 tig0010571:+26697 None:intergenic
ATCTTGATGGTCCCAATCAA+TGG 0.467905 tig0010571:-21553 Msa1348830:three_prime_UTR
TGCAAATGACAACGGTTATG+TGG 0.469305 tig0010571:-23408 Msa1348830:CDS
AAAGGGGCAACTTGAACCAT+TGG 0.469373 tig0010571:+26547 None:intergenic
AAATGTTGCTTGCAATGTTA+GGG 0.469579 tig0010571:-27542 Msa1348830:CDS
AAGTGGTGAACACCTCTCAC+TGG 0.471826 tig0010571:+30381 None:intergenic
AGTTCTCCTGCTAGAGAAGA+AGG 0.472341 tig0010571:-26508 Msa1348830:CDS
TCACCATCACTTTCAATTCA+CGG 0.472801 tig0010571:-30693 Msa1348830:five_prime_UTR
TGGGGATTTATTGTTGCCAC+AGG 0.473114 tig0010571:-29415 Msa1348830:CDS
AAATACAATGCGCTCATTCG+AGG 0.473176 tig0010571:-29311 Msa1348830:CDS
CATCATCTTGTCTTGTAAAC+CGG 0.473906 tig0010571:+21496 None:intergenic
GCTTGCGCCCTCTTGCAATC+AGG 0.474574 tig0010571:+28582 None:intergenic
GCAATCTCTGGTGGCTCTCG+TGG 0.475076 tig0010571:+26164 None:intergenic
GTAGGTCATCTTCTAGCCAC+AGG 0.476095 tig0010571:-25457 Msa1348830:CDS
CATCTTCTGGTAGATATCCT+AGG 0.476477 tig0010571:-21851 Msa1348830:CDS
CAGCTGTTATGCCGATGTAT+GGG 0.479732 tig0010571:-29492 Msa1348830:CDS
TTTCTTGCAACGCATAAGAC+AGG 0.481504 tig0010571:+27562 None:intergenic
GACCTGCATGGGAAGATCTT+CGG 0.482586 tig0010571:-28610 Msa1348830:CDS
GATGAGCCTGGTTCTGCATA+TGG 0.484490 tig0010571:-23452 Msa1348830:CDS
GCAACATGGACAAGATGTTA+GGG 0.485460 tig0010571:-26431 Msa1348830:CDS
TTTCCTGTAGAAGAGGAGAT+TGG 0.485845 tig0010571:-26322 Msa1348830:CDS
ATCATAGATGCGTGTGGTGC+AGG 0.486774 tig0010571:+26616 None:intergenic
CTATGCAAGCTTGATTCTAA+AGG 0.488703 tig0010571:+26529 None:intergenic
AGACTGCCTCCTCTTTAGGC+AGG 0.490073 tig0010571:+23357 None:intergenic
GCGAATCGCTGCAGAGTTCG+TGG 0.490243 tig0010571:+21873 None:intergenic
GGGATTTGGCAGAACTAGAA+TGG 0.490515 tig0010571:-24684 Msa1348830:CDS
GCAGTATGCTGAAAATGATC+AGG 0.490876 tig0010571:-29179 Msa1348830:CDS
TTCTAGTTCTGCCAAATCCC+TGG 0.491193 tig0010571:+24687 None:intergenic
TCATCTTCATAGGCAATTTG+AGG 0.492346 tig0010571:+27142 None:intergenic
GACGATGGATCTGCTTCCTA+TGG 0.493208 tig0010571:-26909 Msa1348830:CDS
TGATTAGGGTTTGAAGATTG+GGG 0.493333 tig0010571:+30845 None:intergenic
AATCAATACTACAATTCAAT+CGG 0.496091 tig0010571:-30810 Msa1348830:five_prime_UTR
ATTATCCTCCACTGAAATAG+AGG 0.496095 tig0010571:-21615 Msa1348830:three_prime_UTR
GCAAGTGTAAGAGCTGATTC+TGG 0.496248 tig0010571:+30302 None:intergenic
GATGGCCAGGTCTATGGTAA+AGG 0.497354 tig0010571:-22496 Msa1348830:CDS
GAACCAATCTCCTCTTCTAC+AGG 0.497383 tig0010571:+26319 None:intergenic
ATGGCCAGGTCTATGGTAAA+GGG 0.497401 tig0010571:-22495 Msa1348830:CDS
GATTCTATTAAACATTTGGC+AGG 0.498397 tig0010571:-24638 Msa1348830:intron
GAATCTCACCAATTCCTTGA+GGG 0.499347 tig0010571:+23256 None:intergenic
AATGATAACTAGGGAGCATA+TGG 0.499503 tig0010571:+26004 None:intergenic
GGGATTGCTGGAGCATTCCT+AGG 0.502433 tig0010571:+21834 None:intergenic
CAGGCTGCTGAGAAGGCACT+TGG 0.503322 tig0010571:-22323 Msa1348830:CDS
ATGTGAAGGGTGGTGGCTGT+TGG 0.505734 tig0010571:-21726 Msa1348830:three_prime_UTR
CCATAGTTCGACCGCTGATA+CGG 0.506028 tig0010571:-29087 Msa1348830:CDS
AATCCTGTTTCTCTTGTCAA+GGG 0.506388 tig0010571:+21814 None:intergenic
TCCGCTCGTGCACCATCCCG+TGG 0.507027 tig0010571:-26352 Msa1348830:CDS
AAATCCTGTTTCTCTTGTCA+AGG 0.507090 tig0010571:+21813 None:intergenic
ATTTCCTGTAATACTGCAAC+TGG 0.507958 tig0010571:+25389 None:intergenic
TGAGGTAGAAAGAAAATTGA+AGG 0.509056 tig0010571:-26847 Msa1348830:intron
GAATTTGTTAACATTGGAGC+AGG 0.509399 tig0010571:+23091 None:intergenic
CAGAATTAGACCCAGATACA+AGG 0.509572 tig0010571:-26471 Msa1348830:CDS
CAGAGAGCTGCAGTTCTCCA+TGG 0.511868 tig0010571:-25185 Msa1348830:CDS
ACTTCCCCTTCTTCTCTAGC+AGG 0.511969 tig0010571:+26502 None:intergenic
CGCATTGTATGCGTTAAGTC+CGG 0.512609 tig0010571:-28452 Msa1348830:intron
GACTGCCTCCTCTTTAGGCA+GGG 0.513560 tig0010571:+23358 None:intergenic
CCTCCTTTGGCAATCTCTGG+TGG 0.515237 tig0010571:+26155 None:intergenic
GCTAGAGAAGAAGGGGAAGT+AGG 0.515832 tig0010571:-26499 Msa1348830:CDS
CAACCAATACTCCATTGATT+GGG 0.517365 tig0010571:+21542 None:intergenic
TACTGGTATGACTGTTGTTG+GGG 0.517390 tig0010571:-21779 Msa1348830:three_prime_UTR
GAAGCCTTCGCCTTGTATCT+GGG 0.517685 tig0010571:+26461 None:intergenic
GATGCGTGTGGTGCAGGTGG+TGG 0.517828 tig0010571:+26622 None:intergenic
TCGCTAACATAACCCGGTAG+TGG 0.518593 tig0010571:-21316 Msa1348830:three_prime_UTR
ATGTGAATCAGGCCATTTCA+GGG 0.520172 tig0010571:-21927 Msa1348830:intron
ACAACGAATTTCTGGCATGC+AGG 0.520484 tig0010571:-29242 Msa1348830:CDS
TTACTGGTGTAGCAGGTTGA+AGG 0.523501 tig0010571:+26572 None:intergenic
AGGGGAGGTGATGTTGGGTG+AGG 0.524597 tig0010571:-30494 Msa1348830:CDS
CTCCGAAGATCTTCCCATGC+AGG 0.526395 tig0010571:+28608 None:intergenic
TAATTGCTCACGTCAGGGGC+AGG 0.526581 tig0010571:+27103 None:intergenic
CAGGTCTATGGTAAAGGGAC+CGG 0.526934 tig0010571:-22490 Msa1348830:CDS
CAGTATACAATGGTATCTCC+TGG 0.530309 tig0010571:-26652 Msa1348830:CDS
TCACGTGCTAAGGATGAGCC+TGG 0.532562 tig0010571:-23464 Msa1348830:CDS
TTTCTTCAGTGCATGATGGA+GGG 0.533552 tig0010571:-23139 Msa1348830:intron
GAATTGTAGTATTGATTAGG+GGG 0.534734 tig0010571:+30816 None:intergenic
TTGTTTGCACAATGGCTGAA+AGG 0.536700 tig0010571:-28547 Msa1348830:CDS
AATGATCAGGTAGTTGATAA+CGG 0.538229 tig0010571:-29166 Msa1348830:CDS
GCATAGTATGGAGCAAATGC+AGG 0.538993 tig0010571:+27731 None:intergenic
CAAGGTGATAGAACCACTAC+CGG 0.539999 tig0010571:+21303 None:intergenic
CCGCTCGTGCACCATCCCGT+GGG 0.541232 tig0010571:-26351 Msa1348830:CDS
ACTGCCTCCTCTTTAGGCAG+GGG 0.542578 tig0010571:+23359 None:intergenic
GTGTGGATATGCTTCGAGAC+CGG 0.543299 tig0010571:-21515 Msa1348830:three_prime_UTR
GAGTATGCATTGCATTGCAT+TGG 0.543829 tig0010571:+21465 None:intergenic
AGCAAATTTACCTCAGCTTG+AGG 0.544349 tig0010571:+27707 None:intergenic
TTGACGATCGCTTGAAAGTG+TGG 0.546180 tig0010571:-27787 Msa1348830:CDS
TTCTCCTGCTAGAGAAGAAG+GGG 0.546543 tig0010571:-26506 Msa1348830:CDS
CATATATTTATCACGTGCTA+AGG 0.549424 tig0010571:-23474 Msa1348830:CDS
CATTGTATTTGCTACGACAA+GGG 0.550005 tig0010571:+29324 None:intergenic
TTAATAACGGAGTCTTTAGA+GGG 0.552752 tig0010571:+21276 None:intergenic
TGGCTCATGCCATCCAAAGA+TGG 0.556645 tig0010571:-27819 Msa1348830:CDS
TTACTAACGCCATCTTTGGA+TGG 0.556894 tig0010571:+27810 None:intergenic
CCTCGAGACTCTGTTAATAA+CGG 0.557760 tig0010571:+21263 None:intergenic
CTAGAAGATGACCTACCAAA+GGG 0.558062 tig0010571:+25464 None:intergenic
GATCTCTTAACTTCCAACCT+AGG 0.559127 tig0010571:+23296 None:intergenic
GGGACCATTTCAACTTAAGT+GGG 0.563453 tig0010571:-21700 Msa1348830:three_prime_UTR
AAAAGGATGGTTGATGAGGC+CGG 0.563971 tig0010571:+26227 None:intergenic
ATAAATCGGTGGTGTATCAA+GGG 0.565841 tig0010571:-30513 Msa1348830:CDS
AGATTCTGGTCCATCACGTA+TGG 0.567393 tig0010571:-26257 Msa1348830:CDS
TTCAACAATGTGAAGGGTGG+TGG 0.568405 tig0010571:-21733 Msa1348830:three_prime_UTR
CTTGTGTATCAGAGAGAACA+AGG 0.570390 tig0010571:-30275 Msa1348830:intron
TTTGACACGCATCAATCCGC+AGG 0.570857 tig0010571:-29044 Msa1348830:intron
GCAGGTGGTGGAACTGAACC+AGG 0.572173 tig0010571:+26634 None:intergenic
AAACGGATCTCTATTTCCAT+AGG 0.572538 tig0010571:+26893 None:intergenic
GGGTTCAGTCTCTGCCCTCA+AGG 0.574042 tig0010571:-23270 Msa1348830:CDS
AGATAATGCTGGAACAAGCT+CGG 0.575803 tig0010571:+29123 None:intergenic
GCAAATGACAACGGTTATGT+GGG 0.575899 tig0010571:-23407 Msa1348830:CDS
CCCACGGGATGGTGCACGAG+CGG 0.575953 tig0010571:+26351 None:intergenic
CGGTCCCTTTACCATAGACC+TGG 0.577777 tig0010571:+22491 None:intergenic
TGATGACTGTCAGATAATGC+TGG 0.578075 tig0010571:+29112 None:intergenic
GGAGTATTGGTTGCATTGTG+TGG 0.578991 tig0010571:-21532 Msa1348830:three_prime_UTR
CTAGTACAACCATTCAGTAC+AGG 0.580882 tig0010571:-21369 Msa1348830:three_prime_UTR
GTTCTCCTGCTAGAGAAGAA+GGG 0.582396 tig0010571:-26507 Msa1348830:CDS
TAATACAATGGTACAAAATG+TGG 0.583217 tig0010571:+21634 None:intergenic
AGTGGTGAACACCTCTCACT+GGG 0.584365 tig0010571:+30382 None:intergenic
ATGGGACGAGGCTAAAATGC+AGG 0.586932 tig0010571:-22461 Msa1348830:intron
CTGCCTCCTCTTTAGGCAGG+GGG 0.587416 tig0010571:+23360 None:intergenic
ACAATAAATCCCCAGAAACA+TGG 0.587554 tig0010571:+29424 None:intergenic
CTAGATAATTGCTCACGTCA+GGG 0.588151 tig0010571:+27098 None:intergenic
GGTCCCAATCAATGGAGTAT+TGG 0.588357 tig0010571:-21545 Msa1348830:three_prime_UTR
CGCTCGTGCACCATCCCGTG+GGG 0.589699 tig0010571:-26350 Msa1348830:CDS
GCACGAGCGGAAACTTGTAC+AGG 0.590581 tig0010571:+26364 None:intergenic
TTCTTCTCTTCAGTATACAA+TGG 0.591221 tig0010571:-26662 Msa1348830:CDS
GAAAGATGAAGTATACGCAC+AGG 0.591633 tig0010571:-23062 Msa1348830:intron
GTTGGAAGTTAAGAGATCAA+CGG 0.591847 tig0010571:-23291 Msa1348830:CDS
GGGACTATGCACTAGAAATG+TGG 0.592048 tig0010571:-28526 Msa1348830:CDS
GAGCAATTATCTAGTTTCAG+AGG 0.592959 tig0010571:-27089 Msa1348830:intron
CAGATAACGAATGATAACTA+GGG 0.593484 tig0010571:+25995 None:intergenic
TAGATAATTGCTCACGTCAG+GGG 0.595191 tig0010571:+27099 None:intergenic
AGCTGCATCAGATCCATCAA+GGG 0.595432 tig0010571:-23327 Msa1348830:CDS
CGGAGCTACCTGATTGCAAG+AGG 0.598380 tig0010571:-28590 Msa1348830:CDS
CCCTAGATCCAGAAAACGAA+AGG 0.598960 tig0010571:+30921 None:intergenic
CGGTGCTTCTCCATACGTGA+TGG 0.599393 tig0010571:+26247 None:intergenic
ATAGTATGAAGAACAGCAAG+TGG 0.600429 tig0010571:+30364 None:intergenic
TCTGCATATGGTGATGTGAG+TGG 0.601289 tig0010571:-23440 Msa1348830:CDS
CGGAAACTTGTACAGGATTG+GGG 0.602565 tig0010571:+26371 None:intergenic
CAGGAAATTGCACTGAAGTG+TGG 0.604310 tig0010571:-25374 Msa1348830:CDS
GTAAAGGGACCGGATTAACA+TGG 0.605523 tig0010571:-22480 Msa1348830:CDS
GATCCGTGAATTGAAAGTGA+TGG 0.606135 tig0010571:+30690 None:intergenic
CTTGTTCTCTCTGATACACA+AGG 0.606958 tig0010571:+30276 None:intergenic
CCATTTCAACTTAAGTGGGT+CGG 0.607098 tig0010571:-21696 Msa1348830:three_prime_UTR
TGAAGAGAAGAAGTGAGCCT+GGG 0.609026 tig0010571:+26673 None:intergenic
TGAATTGTAGTATTGATTAG+GGG 0.609083 tig0010571:+30815 None:intergenic
GAGTCTTTAGAGGGGACTCA+AGG 0.610096 tig0010571:+21285 None:intergenic
GACGACAGACCATGTTTCTG+GGG 0.612175 tig0010571:-29433 Msa1348830:CDS
GTGATGACATCCCCTTTGGT+AGG 0.612760 tig0010571:-25475 Msa1348830:CDS
TTGCTCACGTCAGGGGCAGG+AGG 0.612851 tig0010571:+27106 None:intergenic
GGATGAGAAAGATCAACCTC+GGG 0.613520 tig0010571:-27765 Msa1348830:CDS
TTCTTGCAACGCATAAGACA+GGG 0.614336 tig0010571:+27563 None:intergenic
TGAATCTCACCAATTCCTTG+AGG 0.614469 tig0010571:+23255 None:intergenic
GCATTGTATTTGCTACGACA+AGG 0.614622 tig0010571:+29323 None:intergenic
TGTGAGGTTGAGACCTGCAT+GGG 0.616136 tig0010571:-28621 Msa1348830:CDS
ACGAATTTCTGGCATGCAGG+CGG 0.618925 tig0010571:-29239 Msa1348830:CDS
AGCTGTTATGCCGATGTATG+GGG 0.618991 tig0010571:-29491 Msa1348830:CDS
GGGATGGTTTCCTGTAGAAG+AGG 0.619654 tig0010571:-26329 Msa1348830:CDS
GTACCTCACCTCTATTTCAG+TGG 0.622266 tig0010571:+21607 None:intergenic
CAACTGCTAAGTTAGATCCC+AGG 0.623962 tig0010571:-26690 Msa1348830:CDS
TATTAACAGAGTCTCGAGGT+TGG 0.624560 tig0010571:-21259 Msa1348830:three_prime_UTR
CCACCAGAGATTGCCAAAGG+AGG 0.628128 tig0010571:-26155 Msa1348830:intron
GGTTGAAGGAACTGTGCGTG+AGG 0.629555 tig0010571:+26586 None:intergenic
ACATCACCATATGCAGAACC+AGG 0.630395 tig0010571:+23446 None:intergenic
TGGTTCACAACCACCAAACA+GGG 0.630610 tig0010571:-26302 Msa1348830:CDS
ATCGGTGGTGTATCAAGGGG+AGG 0.632353 tig0010571:-30509 Msa1348830:CDS
GTTTGTCTTCTACAGGACGA+TGG 0.634349 tig0010571:-26924 Msa1348830:intron
CCTCACCTCTATTTCAGTGG+AGG 0.635752 tig0010571:+21610 None:intergenic
TTTCCTAATGCAAATGACAA+CGG 0.637618 tig0010571:-23416 Msa1348830:CDS
GCTAGAAGATGACCTACCAA+AGG 0.638457 tig0010571:+25463 None:intergenic
TGATGGCATGGCAGATGCTG+AGG 0.638496 tig0010571:-26865 Msa1348830:CDS
AAGGTGATAGAACCACTACC+GGG 0.638993 tig0010571:+21304 None:intergenic
CATCACGTATGGAGAAGCAC+CGG 0.639675 tig0010571:-26246 Msa1348830:CDS
GGGATGAGAAAGATCAACCT+CGG 0.640588 tig0010571:-27766 Msa1348830:CDS
ATGCAAGCTTGATTCTAAAG+GGG 0.641469 tig0010571:+26531 None:intergenic
TGTAATTCTTCCCCATACAT+CGG 0.643719 tig0010571:+29481 None:intergenic
GACCGGATTAACATGGGACG+AGG 0.645213 tig0010571:-22473 Msa1348830:CDS
GTTGCTTGCAATGTTAGGGG+TGG 0.645636 tig0010571:-27538 Msa1348830:CDS
TGCTACACCAGTAAAACCAA+TGG 0.645858 tig0010571:-26563 Msa1348830:CDS
AGCGCGATATAAGGCTGCTG+AGG 0.646369 tig0010571:-24660 Msa1348830:CDS
TAGGTCATCTTCTAGCCACA+GGG 0.647886 tig0010571:-25456 Msa1348830:CDS
TGCATGCCAGAAATTCGTTG+TGG 0.649838 tig0010571:+29244 None:intergenic
GGAAGTCTAAGAACAATGCA+TGG 0.650176 tig0010571:-22302 Msa1348830:CDS
GTGATACAAGTGTTCTTGTG+AGG 0.650675 tig0010571:-28637 Msa1348830:CDS
GAGCCACCAGAGATTGCCAA+AGG 0.656225 tig0010571:-26158 Msa1348830:CDS
ATACTATGCTCCTCAAGCTG+AGG 0.657687 tig0010571:-27717 Msa1348830:intron
TTACTGATTCAACAATGTGA+AGG 0.658274 tig0010571:-21740 Msa1348830:three_prime_UTR
TAGACCCAGATACAAGGCGA+AGG 0.659790 tig0010571:-26465 Msa1348830:CDS
GGAGCTACCTGATTGCAAGA+GGG 0.659861 tig0010571:-28589 Msa1348830:CDS
TAGAATGAAGGATACCTCCA+TGG 0.660178 tig0010571:+25168 None:intergenic
TTCAGTGGAGGATAATACAA+TGG 0.661505 tig0010571:+21622 None:intergenic
TAAATCGGTGGTGTATCAAG+GGG 0.662276 tig0010571:-30512 Msa1348830:CDS
AGAGACGGCAGAGTTCTCCC+AGG 0.665045 tig0010571:-22268 Msa1348830:intron
TGACGATCGCTTGAAAGTGT+GGG 0.665059 tig0010571:-27786 Msa1348830:CDS
TTGTGAGGTTGAGACCTGCA+TGG 0.665083 tig0010571:-28622 Msa1348830:CDS
GGGTGTCTAATGGGAAATGG+AGG 0.665273 tig0010571:+26391 None:intergenic
ATGGCCACAGCATTCAGAGA+CGG 0.672222 tig0010571:-22283 Msa1348830:CDS
ATAGATGCGTGTGGTGCAGG+TGG 0.672645 tig0010571:+26619 None:intergenic
GCAGGAACGACGTGTACCCG+AGG 0.674336 tig0010571:+27749 None:intergenic
TACTGATTCAACAATGTGAA+GGG 0.675730 tig0010571:-21739 Msa1348830:three_prime_UTR
AGACGAATTATAAAGTCCTG+TGG 0.679453 tig0010571:+29399 None:intergenic
TCTGCCGTCTCTGAATGCTG+TGG 0.679661 tig0010571:+22279 None:intergenic
GGAGATCAAGCGCTACCAAG+AGG 0.682061 tig0010571:-29218 Msa1348830:CDS
AGGCTTCTCATATTGCAACA+TGG 0.682388 tig0010571:-26445 Msa1348830:CDS
AATGTTGCTTGCAATGTTAG+GGG 0.688191 tig0010571:-27541 Msa1348830:CDS
TAAAGGGACCGGATTAACAT+GGG 0.691890 tig0010571:-22479 Msa1348830:CDS
CCGTTATTAACAGAGTCTCG+AGG 0.692787 tig0010571:-21263 Msa1348830:three_prime_UTR
GCTCGTGCACCATCCCGTGG+GGG 0.693202 tig0010571:-26349 Msa1348830:CDS
GTTTACAAGACAAGATGATG+AGG 0.697907 tig0010571:-21493 Msa1348830:three_prime_UTR
CCTCCACTGAAATAGAGGTG+AGG 0.698728 tig0010571:-21610 Msa1348830:three_prime_UTR
TGAATTGAAAGTGATGGTGA+CGG 0.703614 tig0010571:+30696 None:intergenic
TAGAAGATGACCTACCAAAG+GGG 0.717447 tig0010571:+25465 None:intergenic
AGAGCTGCAGTTCTCCATGG+AGG 0.738399 tig0010571:-25182 Msa1348830:intron
TAATAACGGAGTCTTTAGAG+GGG 0.740608 tig0010571:+21277 None:intergenic
TGATTCAACAATGTGAAGGG+TGG 0.753612 tig0010571:-21736 Msa1348830:three_prime_UTR
AATTGTATCATAGATGCGTG+TGG 0.754034 tig0010571:+26610 None:intergenic
ATTCAGAGTCAAGATCCCTG+TGG 0.788306 tig0010571:+25441 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAAAAAAAAAA+AGG + tig0010571:29510-29529 None:intergenic 0.0%
!!! TATTTTTTTTATTTTTATAA+TGG - tig0010571:29520-29539 Msa1348830:intron 0.0%
!! ATAAAATAGAATGAAAAATT+AGG + tig0010571:21438-21457 None:intergenic 10.0%
!!! TTTATACATTTTTTGTTTTT+GGG + tig0010571:21564-21583 None:intergenic 10.0%
!!! ATTTATACATTTTTTGTTTT+TGG + tig0010571:21565-21584 None:intergenic 10.0%
!! AAAACAAAAAATGTATAAAT+CGG - tig0010571:21565-21584 Msa1348830:three_prime_UTR 10.0%
!! AAATTATATATGGAAAATAA+AGG + tig0010571:22536-22555 None:intergenic 10.0%
!! AATTAAAAAAACTTGTAATA+AGG + tig0010571:24047-24066 None:intergenic 10.0%
!!! ATTACAAGTTTTTTTAATTT+AGG - tig0010571:24048-24067 Msa1348830:intron 10.0%
!!! AAATTTCTCATTTTTTTAAT+CGG - tig0010571:27047-27066 Msa1348830:intron 10.0%
!! GGTAAAAAATTAAATAAAAA+TGG + tig0010571:27202-27221 None:intergenic 10.0%
!!! TTTTTATTTAATTTTTTACC+GGG - tig0010571:27202-27221 Msa1348830:intron 10.0%
!! AAAAAAAAAAAACAGTCTTT+GGG + tig0010571:21527-21546 None:intergenic 15.0%
!!! TTTTTTTTTTTGTGATTTGA+AGG - tig0010571:21536-21555 Msa1348830:three_prime_UTR 15.0%
!!! TTTTTTTTTTGTGATTTGAA+GGG - tig0010571:21537-21556 Msa1348830:three_prime_UTR 15.0%
!!! TTATGATATCAATTTGTTTT+TGG - tig0010571:22385-22404 Msa1348830:intron 15.0%
!! TTCTACAAGAAAATTATATA+TGG + tig0010571:22546-22565 None:intergenic 15.0%
!! TTTAAATATATCATTCTACT+GGG - tig0010571:23148-23167 Msa1348830:intron 15.0%
!! AATTTAATGTTGTGATTTAT+AGG + tig0010571:23340-23359 None:intergenic 15.0%
!! ATAAATTCAAAAGAACTATT+AGG - tig0010571:23616-23635 Msa1348830:intron 15.0%
!!! CTTTCAAATAATTTGTATTT+AGG + tig0010571:23983-24002 None:intergenic 15.0%
!! TACAAATTATTTGAAAGTTA+AGG - tig0010571:23986-24005 Msa1348830:intron 15.0%
!!! ACTATTTGAGAATTTTTAAT+AGG + tig0010571:24075-24094 None:intergenic 15.0%
!! TAAAAATTCTCAAATAGTTT+AGG - tig0010571:24077-24096 Msa1348830:intron 15.0%
!! AAAAATTCTCAAATAGTTTA+GGG - tig0010571:24078-24097 Msa1348830:intron 15.0%
!! ATATAGTTTAATTACTCTAT+GGG + tig0010571:24105-24124 None:intergenic 15.0%
!! AATATAGTTTAATTACTCTA+TGG + tig0010571:24106-24125 None:intergenic 15.0%
!!! TAAATAAATAGATATTTTCC+AGG + tig0010571:24675-24694 None:intergenic 15.0%
!! TATCATACAGAAAAATTATA+TGG + tig0010571:26396-26415 None:intergenic 15.0%
!!! ACATTTTAAAGTTTCATATA+AGG + tig0010571:26492-26511 None:intergenic 15.0%
!! TGTATAGAAAATATAAAACT+TGG + tig0010571:26997-27016 None:intergenic 15.0%
!!! TTTTATTTAATTTTTTACCG+GGG - tig0010571:27203-27222 Msa1348830:intron 15.0%
!! TAGAAATTTAATTGATCTTT+CGG - tig0010571:27235-27254 Msa1348830:intron 15.0%
!! GTGATAATAACTAAATAATA+TGG + tig0010571:27639-27658 None:intergenic 15.0%
!! TCTAATTTAACAATAAACAA+GGG + tig0010571:28179-28198 None:intergenic 15.0%
!! ATCTAATTTAACAATAAACA+AGG + tig0010571:28180-28199 None:intergenic 15.0%
!!! TTTACAACTTTTTTTAAAAG+AGG + tig0010571:28566-28585 None:intergenic 15.0%
!!! TAAATATATTTTGACCTTTT+TGG - tig0010571:28582-28601 Msa1348830:CDS 15.0%
!! TAATAGTGAAACATTATTTA+TGG - tig0010571:29668-29687 Msa1348830:intron 15.0%
!! TGAATACCAATTTAAAAAAA+GGG + tig0010571:30750-30769 None:intergenic 15.0%
!!! TTGAATTGTAGTATTGATTA+GGG + tig0010571:21281-21300 None:intergenic 20.0%
!!! ATTGAATTGTAGTATTGATT+AGG + tig0010571:21282-21301 None:intergenic 20.0%
!! AATCAATACTACAATTCAAT+CGG - tig0010571:21282-21301 Msa1348830:three_prime_UTR 20.0%
!! TTTCATCTAATCATCATAAT+TGG + tig0010571:21501-21520 None:intergenic 20.0%
!! CAAAAAAAAAAAACAGTCTT+TGG + tig0010571:21528-21547 None:intergenic 20.0%
!!! ATATATATTAATCGCGATTT+TGG - tig0010571:22257-22276 Msa1348830:intron 20.0%
!! ATGTATCATACTGAAAATAT+AGG - tig0010571:22353-22372 Msa1348830:intron 20.0%
!! GTTTAAATATATCATTCTAC+TGG - tig0010571:23147-23166 Msa1348830:intron 20.0%
!! GAATTTATCAAATTTGAATC+TGG + tig0010571:23604-23623 None:intergenic 20.0%
!! TGAAAACAAAATTAACAAGA+AGG + tig0010571:23694-23713 None:intergenic 20.0%
!! AACTTCACAAAATTTGTAAT+TGG - tig0010571:23862-23881 Msa1348830:intron 20.0%
!! ACTTCACAAAATTTGTAATT+GGG - tig0010571:23863-23882 Msa1348830:intron 20.0%
!! AAGGATCCAATTAAAATTTA+GGG + tig0010571:23890-23909 None:intergenic 20.0%
!! TACAAATTACTTAAAAGTTC+AGG - tig0010571:23955-23974 Msa1348830:intron 20.0%
!! ACAAATTACTTAAAAGTTCA+GGG - tig0010571:23956-23975 Msa1348830:intron 20.0%
!! TGTTTCGATAATATTATACT+AGG - tig0010571:24217-24236 Msa1348830:intron 20.0%
!! CAGTTCATATAACTAAAAAA+GGG + tig0010571:24463-24482 None:intergenic 20.0%
!! TCAGTTCATATAACTAAAAA+AGG + tig0010571:24464-24483 None:intergenic 20.0%
!!! TTTGTTTTGTTTTGTTTTGT+AGG - tig0010571:24493-24512 Msa1348830:intron 20.0%
!! TAATTTAGAGATAAATGAGT+TGG - tig0010571:24696-24715 Msa1348830:CDS 20.0%
!! AGTATTATCTTTATAACAAC+TGG + tig0010571:24855-24874 None:intergenic 20.0%
!! ATCTTTAATATCATCTTCAT+AGG + tig0010571:24963-24982 None:intergenic 20.0%
!!! TTTTGGATTATTGTTTTCTT+GGG - tig0010571:26339-26358 Msa1348830:CDS 20.0%
!! GAAAGATCAATTAAATTTCT+AGG + tig0010571:27236-27255 None:intergenic 20.0%
!! TGTTAATCAAATAGAGAAAA+AGG + tig0010571:27664-27683 None:intergenic 20.0%
!! TAATTTAACAATAAACAAGG+GGG + tig0010571:28177-28196 None:intergenic 20.0%
!! CTAATTTAACAATAAACAAG+GGG + tig0010571:28178-28197 None:intergenic 20.0%
!!! AATATGTGTTATTTTACCTT+AGG + tig0010571:28209-28228 None:intergenic 20.0%
!!! TAAATGACAAATCCATTTTT+TGG - tig0010571:28286-28305 Msa1348830:intron 20.0%
!! TAAAAGTTGAAACTATTACA+TGG + tig0010571:28315-28334 None:intergenic 20.0%
!!! TAATCATTTTTTATGATGCT+AGG + tig0010571:28470-28489 None:intergenic 20.0%
!!! AACCATATTTTTGTTAACTT+CGG - tig0010571:28888-28907 Msa1348830:intron 20.0%
!! CTGAACTAATTCATTTAAAA+AGG - tig0010571:29084-29103 Msa1348830:CDS 20.0%
!!! TTCCTTATATTTTTTCTGTT+AGG - tig0010571:29227-29246 Msa1348830:CDS 20.0%
!!! GTTTACTATTCTTATTTTTG+AGG - tig0010571:29310-29329 Msa1348830:CDS 20.0%
!! AAGAAAGTTAATCAAATTCA+AGG + tig0010571:29710-29729 None:intergenic 20.0%
!! TGATTAACTTTCTTACATAT+TGG - tig0010571:29716-29735 Msa1348830:intron 20.0%
!! CAAAATAATATAATAGACCT+GGG + tig0010571:29844-29863 None:intergenic 20.0%
!! TCAAAATAATATAATAGACC+TGG + tig0010571:29845-29864 None:intergenic 20.0%
!!! TTGTTGTTTATTCTCATATA+TGG - tig0010571:30097-30116 Msa1348830:intron 20.0%
!!! TAACTATTTTTCTTCATCAT+TGG - tig0010571:30120-30139 Msa1348830:intron 20.0%
!! AATCAATTCTCAATTTCATT+AGG + tig0010571:30670-30689 None:intergenic 20.0%
!! GTGAATACCAATTTAAAAAA+AGG + tig0010571:30751-30770 None:intergenic 20.0%
!! ATAACTCAACAAAAAAACTA+GGG + tig0010571:30924-30943 None:intergenic 20.0%
!!! TGAATTGTAGTATTGATTAG+GGG + tig0010571:21280-21299 None:intergenic 25.0%
! ACAAAAAATGTATAAATCGG+TGG - tig0010571:21568-21587 Msa1348830:three_prime_UTR 25.0%
! AGATTTAGTCCAAAATCATA+GGG + tig0010571:21902-21921 None:intergenic 25.0%
!! GTTAATGTTGCAAGAATTTT+TGG - tig0010571:21976-21995 Msa1348830:intron 25.0%
! GTATCTGTTAAATGATCAAT+TGG + tig0010571:22064-22083 None:intergenic 25.0%
! ACATAATACCCCAATTAATT+GGG + tig0010571:22107-22126 None:intergenic 25.0%
! AACATAATACCCCAATTAAT+TGG + tig0010571:22108-22127 None:intergenic 25.0%
! ATCATACTGAAAATATAGGT+TGG - tig0010571:22357-22376 Msa1348830:intron 25.0%
! TCATACTGAAAATATAGGTT+GGG - tig0010571:22358-22377 Msa1348830:intron 25.0%
!! TACTGGTTACTTAAATTTAC+CGG - tig0010571:22481-22500 Msa1348830:CDS 25.0%
! TTGTTAAATCTCAGATGTTT+GGG - tig0010571:22722-22741 Msa1348830:intron 25.0%
! TTCAAACATATGTAAGCATA+AGG - tig0010571:23382-23401 Msa1348830:CDS 25.0%
!! ATGAGGACATCTTATATTTT+AGG - tig0010571:23766-23785 Msa1348830:intron 25.0%
! AAACATTCTCAAATAGTACA+GGG + tig0010571:23800-23819 None:intergenic 25.0%
! TAAACATTCTCAAATAGTAC+AGG + tig0010571:23801-23820 None:intergenic 25.0%
!! TACAAATTTTGTGAAGTTCT+AGG + tig0010571:23860-23879 None:intergenic 25.0%
! AGGATCCAATTAAAATTTAG+GGG + tig0010571:23889-23908 None:intergenic 25.0%
! CAAGGATCCAATTAAAATTT+AGG + tig0010571:23891-23910 None:intergenic 25.0%
!!! CTTTTAAGTAATTTGTAGCA+TGG + tig0010571:23952-23971 None:intergenic 25.0%
! TTATCTGTATACTGAAATGA+AGG - tig0010571:24613-24632 Msa1348830:intron 25.0%
! TATCTGTATACTGAAATGAA+GGG - tig0010571:24614-24633 Msa1348830:intron 25.0%
!!! TGTCATTTTTCTAATCTGAT+AGG - tig0010571:25056-25075 Msa1348830:intron 25.0%
!!! GTCATTTTTCTAATCTGATA+GGG - tig0010571:25057-25076 Msa1348830:intron 25.0%
! AAATCTGCAACAACAAAAAA+TGG + tig0010571:26040-26059 None:intergenic 25.0%
!!! GTTTTGGATTATTGTTTTCT+TGG - tig0010571:26338-26357 Msa1348830:CDS 25.0%
!!! GAAATAACAACTCTACTTTT+TGG - tig0010571:26361-26380 Msa1348830:CDS 25.0%
! AAGTTTCATATAAGGTTTCT+TGG + tig0010571:26484-26503 None:intergenic 25.0%
! GCACTAAAAATAACAGAATT+TGG + tig0010571:26556-26575 None:intergenic 25.0%
! TGTACTATTTAAGCTTTCTT+TGG - tig0010571:26814-26833 Msa1348830:intron 25.0%
!! TAGAGAACTATTTTGTTCAA+TGG - tig0010571:27021-27040 Msa1348830:intron 25.0%
!! AGAGAACTATTTTGTTCAAT+GGG - tig0010571:27022-27041 Msa1348830:intron 25.0%
! TGTGTTTAGTTAATTAAGCA+TGG + tig0010571:27104-27123 None:intergenic 25.0%
! AATTTAATTGATCTTTCGGT+TGG - tig0010571:27239-27258 Msa1348830:intron 25.0%
! TGAGGATTCTATTAAACATT+TGG - tig0010571:27450-27469 Msa1348830:intron 25.0%
! ATAGCATTATATAGAACTGT+TGG - tig0010571:27513-27532 Msa1348830:intron 25.0%
! ATATCTTGATATTAGCTCAT+AGG - tig0010571:27558-27577 Msa1348830:CDS 25.0%
! TATCCTAATATCCTATAAAG+AGG - tig0010571:27696-27715 Msa1348830:intron 25.0%
! ATCCTAATATCCTATAAAGA+GGG - tig0010571:27697-27716 Msa1348830:intron 25.0%
!! AACAATGTCTACATTTTTGT+AGG + tig0010571:27766-27785 None:intergenic 25.0%
! TAATACTGAGACTTACTAAA+TGG - tig0010571:27856-27875 Msa1348830:CDS 25.0%
!!! GAAAAAGTTTTATTGATGGA+AGG + tig0010571:27905-27924 None:intergenic 25.0%
!!! CCATCAATAAAACTTTTTCT+CGG - tig0010571:27906-27925 Msa1348830:intron 25.0%
!! AAACTTGAGAGAATTTTCAA+TGG + tig0010571:28012-28031 None:intergenic 25.0%
!!! TGGTTGTTGTATTTTAACAT+TGG - tig0010571:28096-28115 Msa1348830:intron 25.0%
!! TAAATTAGATTTTCAGCCTA+AGG - tig0010571:28190-28209 Msa1348830:intron 25.0%
! ATGGTCTAATTATCTTTGTA+TGG - tig0010571:28341-28360 Msa1348830:intron 25.0%
! TGGTCTAATTATCTTTGTAT+GGG - tig0010571:28342-28361 Msa1348830:intron 25.0%
!! ATCTTATAGGAGATTTTAGA+TGG + tig0010571:28447-28466 None:intergenic 25.0%
! TAAGCAAATAACATTATCAG+CGG - tig0010571:28488-28507 Msa1348830:CDS 25.0%
! AAATAACAATAGCAAGCAAT+GGG + tig0010571:28516-28535 None:intergenic 25.0%
! AAAATAACAATAGCAAGCAA+TGG + tig0010571:28517-28536 None:intergenic 25.0%
!! TTAACAAAAATATGGTTCTG+GGG + tig0010571:28885-28904 None:intergenic 25.0%
! GTTAACAAAAATATGGTTCT+GGG + tig0010571:28886-28905 None:intergenic 25.0%
! AGTTAACAAAAATATGGTTC+TGG + tig0010571:28887-28906 None:intergenic 25.0%
! AACCGAAGTTAACAAAAATA+TGG + tig0010571:28893-28912 None:intergenic 25.0%
!!! TGAACTGAATTTGTTAACAT+TGG + tig0010571:29010-29029 None:intergenic 25.0%
! AAATGAATTAGTTCAGAGTT+CGG + tig0010571:29080-29099 None:intergenic 25.0%
! TGCCTAACAGAAAAAATATA+AGG + tig0010571:29232-29251 None:intergenic 25.0%
!!! ATTTTTTCTGTTAGGCAATT+TGG - tig0010571:29235-29254 Msa1348830:CDS 25.0%
!!! AAAGTTCTGATATTTTATCC+TGG + tig0010571:29264-29283 None:intergenic 25.0%
! AGTAAACCACATATATAGAA+GGG + tig0010571:29297-29316 None:intergenic 25.0%
! TAGTAAACCACATATATAGA+AGG + tig0010571:29298-29317 None:intergenic 25.0%
!!! TACTATTCTTATTTTTGAGG+AGG - tig0010571:29313-29332 Msa1348830:CDS 25.0%
!!! ACTATTCTTATTTTTGAGGA+GGG - tig0010571:29314-29333 Msa1348830:CDS 25.0%
! TCATCTACTAAATGAAATCT+GGG - tig0010571:29369-29388 Msa1348830:CDS 25.0%
!! AAGAACGAATTTTCCATTTT+AGG - tig0010571:29565-29584 Msa1348830:intron 25.0%
! TCCATAATCAAATTCTATAC+TGG - tig0010571:29999-30018 Msa1348830:intron 25.0%
!!! CTATTTTTGTTATGTGAATC+AGG - tig0010571:30154-30173 Msa1348830:intron 25.0%
! TAATACAATGGTACAAAATG+TGG + tig0010571:30461-30480 None:intergenic 25.0%
! AATTCTCAATTTCATTAGGT+TGG + tig0010571:30666-30685 None:intergenic 25.0%
! TAACTCAACAAAAAAACTAG+GGG + tig0010571:30923-30942 None:intergenic 25.0%
! CATAACTCAACAAAAAAACT+AGG + tig0010571:30925-30944 None:intergenic 25.0%
!! GAATTGTAGTATTGATTAGG+GGG + tig0010571:21279-21298 None:intergenic 30.0%
AGGCACAAATTGATTGAATT+AGG - tig0010571:21317-21336 Msa1348830:three_prime_UTR 30.0%
GGCACAAATTGATTGAATTA+GGG - tig0010571:21318-21337 Msa1348830:three_prime_UTR 30.0%
CAATTCACGGATCTAAAAAT+TGG - tig0010571:21412-21431 Msa1348830:three_prime_UTR 30.0%
ATCATAATTGGCGTCAAAAT+CGG + tig0010571:21489-21508 None:intergenic 30.0%
!! GAACAAGAATTTTGATGTGA+AGG - tig0010571:21661-21680 Msa1348830:three_prime_UTR 30.0%
TACTACTGTTTGCTTCAAAA+TGG - tig0010571:21751-21770 Msa1348830:three_prime_UTR 30.0%
! TCACTTAAACCCTATGATTT+TGG - tig0010571:21890-21909 Msa1348830:CDS 30.0%
GAGATTTAGTCCAAAATCAT+AGG + tig0010571:21903-21922 None:intergenic 30.0%
ACTTAAAGAACTCCAATCTA+TGG - tig0010571:21928-21947 Msa1348830:intron 30.0%
! CAGCTTTAGCAAAAAAAAAC+TGG + tig0010571:22164-22183 None:intergenic 30.0%
!! TTGATAGTGAAATTAGTGTC+TGG - tig0010571:22196-22215 Msa1348830:intron 30.0%
! TGATAGTGAAATTAGTGTCT+GGG - tig0010571:22197-22216 Msa1348830:intron 30.0%
TCGTCTTACTTAAATTTACG+CGG - tig0010571:22457-22476 Msa1348830:intron 30.0%
! TACTTAAATTTACCGGTTAC+CGG - tig0010571:22488-22507 Msa1348830:CDS 30.0%
ATTAATAATTGTCGCGATGT+TGG - tig0010571:22567-22586 Msa1348830:intron 30.0%
GTTGTTAAATCTCAGATGTT+TGG - tig0010571:22721-22740 Msa1348830:intron 30.0%
!! AATGATCAGGTAGTTGATAA+CGG - tig0010571:22926-22945 Msa1348830:intron 30.0%
AAGAAAAGATCATATACCTG+CGG + tig0010571:23067-23086 None:intergenic 30.0%
! CAGAATCATTAGTCTAACAA+AGG - tig0010571:23411-23430 Msa1348830:CDS 30.0%
TCCTTGAACTTCTAAATAGT+AGG - tig0010571:23905-23924 Msa1348830:intron 30.0%
ACCTACTATTTAGAAGTTCA+AGG + tig0010571:23909-23928 None:intergenic 30.0%
AATAGTAGGTCCATGTAATT+TGG - tig0010571:23919-23938 Msa1348830:intron 30.0%
ATAGTAGGTCCATGTAATTT+GGG - tig0010571:23920-23939 Msa1348830:intron 30.0%
! AAGTAATTTGTAGCATGGTA+TGG + tig0010571:23947-23966 None:intergenic 30.0%
! AAATGTTGCTTGCAATGTTA+GGG - tig0010571:24550-24569 Msa1348830:intron 30.0%
ATCTGTATACTGAAATGAAG+GGG - tig0010571:24615-24634 Msa1348830:intron 30.0%
! TTGTTGTTGTTGTAGTTTAG+AGG - tig0010571:24803-24822 Msa1348830:intron 30.0%
AAAATCAGAGTCGTAATTAG+GGG + tig0010571:24892-24911 None:intergenic 30.0%
CAAAATCAGAGTCGTAATTA+GGG + tig0010571:24893-24912 None:intergenic 30.0%
ACAAAATCAGAGTCGTAATT+AGG + tig0010571:24894-24913 None:intergenic 30.0%
TGAGGTAGAAAGAAAATTGA+AGG - tig0010571:25245-25264 Msa1348830:intron 30.0%
ACAGTTCTCAAATATTCACT+CGG + tig0010571:25285-25304 None:intergenic 30.0%
ATGTAATTGTACTTTCTGCT+AGG - tig0010571:25346-25365 Msa1348830:intron 30.0%
TTCTTCTCTTCAGTATACAA+TGG - tig0010571:25430-25449 Msa1348830:CDS 30.0%
TATGCAAGCTTGATTCTAAA+GGG + tig0010571:25565-25584 None:intergenic 30.0%
GAATCTACAAGCATTTCTTT+AGG + tig0010571:25821-25840 None:intergenic 30.0%
AAAGAAATGCTTGTAGATTC+TGG - tig0010571:25821-25840 Msa1348830:intron 30.0%
ATCATTTGATGTCTTACAAG+TGG - tig0010571:25980-25999 Msa1348830:intron 30.0%
CAGATAACGAATGATAACTA+GGG + tig0010571:26100-26119 None:intergenic 30.0%
ACAGAAAAATTATATGGTCG+TGG + tig0010571:26390-26409 None:intergenic 30.0%
ATGAGATATTGTCACTCTAA+GGG + tig0010571:26581-26600 None:intergenic 30.0%
TCATGCAAACATATAGAACA+AGG + tig0010571:26970-26989 None:intergenic 30.0%
!! ACCAAATATTTGACTTTTCC+AGG - tig0010571:27154-27173 Msa1348830:CDS 30.0%
TCCTGGAAAAGTCAAATATT+TGG + tig0010571:27158-27177 None:intergenic 30.0%
!! ATATTTGACTTTTCCAGGAT+TGG - tig0010571:27159-27178 Msa1348830:CDS 30.0%
!! TATTTGACTTTTCCAGGATT+GGG - tig0010571:27160-27179 Msa1348830:CDS 30.0%
GATTCTATTAAACATTTGGC+AGG - tig0010571:27454-27473 Msa1348830:intron 30.0%
AGTCACAAACTTCCAAAATT+AGG + tig0010571:27489-27508 None:intergenic 30.0%
TCCTAATATCCTATAAAGAG+GGG - tig0010571:27698-27717 Msa1348830:intron 30.0%
AAGAAAAAACCCCTCTTTAT+AGG + tig0010571:27710-27729 None:intergenic 30.0%
AAATTCAGAACATCAAAAGC+AGG - tig0010571:27803-27822 Msa1348830:CDS 30.0%
AATTCAGAACATCAAAAGCA+GGG - tig0010571:27804-27823 Msa1348830:CDS 30.0%
!!! CCGAGAAAAAGTTTTATTGA+TGG + tig0010571:27909-27928 None:intergenic 30.0%
ACTTTCTCTCTCATGTTTAA+TGG + tig0010571:28053-28072 None:intergenic 30.0%
AGGTTCAAAATCTTGACATT+TGG + tig0010571:28149-28168 None:intergenic 30.0%
! GTTTCAACTTTTAGTAGAGA+TGG - tig0010571:28322-28341 Msa1348830:intron 30.0%
AGGATAGTTATCTTCATACA+TGG - tig0010571:28390-28409 Msa1348830:intron 30.0%
TTATGATGCTAGGATCTTAT+AGG + tig0010571:28460-28479 None:intergenic 30.0%
GTCTAGAAAAACAACCAAAA+AGG + tig0010571:28599-28618 None:intergenic 30.0%
CATATATTTATCACGTGCTA+AGG - tig0010571:28618-28637 Msa1348830:CDS 30.0%
TTTCCTAATGCAAATGACAA+CGG - tig0010571:28676-28695 Msa1348830:intron 30.0%
! TGAAGTTTGTGTTTCTAACA+TGG - tig0010571:28912-28931 Msa1348830:intron 30.0%
! TTATTTTCTTCAGTGCATGA+TGG - tig0010571:28949-28968 Msa1348830:intron 30.0%
!!! TCTTGGTGTCAATTTTCTAT+CGG - tig0010571:28976-28995 Msa1348830:intron 30.0%
!!! TGTTTTAGTTCAGTCATTTG+AGG - tig0010571:29156-29175 Msa1348830:CDS 30.0%
!!! GTTTTAGTTCAGTCATTTGA+GGG - tig0010571:29157-29176 Msa1348830:CDS 30.0%
!!! TTTTAGTTCAGTCATTTGAG+GGG - tig0010571:29158-29177 Msa1348830:CDS 30.0%
ATTTCTCCCTTCTATATATG+TGG - tig0010571:29288-29307 Msa1348830:CDS 30.0%
CTCATCTACTAAATGAAATC+TGG - tig0010571:29368-29387 Msa1348830:CDS 30.0%
TTATAATGGTAACAAAGCTC+TGG - tig0010571:29534-29553 Msa1348830:intron 30.0%
ACTTTCTTACATATTGGTGT+TGG - tig0010571:29722-29741 Msa1348830:intron 30.0%
TAAGATGTATTTCGTTCTTC+AGG - tig0010571:29750-29769 Msa1348830:intron 30.0%
TTTCTAAATCTAGCACAAAG+TGG - tig0010571:29947-29966 Msa1348830:intron 30.0%
GCCAGTATAGAATTTGATTA+TGG + tig0010571:30003-30022 None:intergenic 30.0%
!! TTACTGATTCAACAATGTGA+AGG - tig0010571:30352-30371 Msa1348830:CDS 30.0%
!! TACTGATTCAACAATGTGAA+GGG - tig0010571:30353-30372 Msa1348830:CDS 30.0%
!! AATGTGGTGTTGTTCTATAT+TGG + tig0010571:30445-30464 None:intergenic 30.0%
GTAAGATAATCACATCTTGA+TGG - tig0010571:30526-30545 Msa1348830:exon 30.0%
!! TCAATTTCATTAGGTTGGTT+TGG + tig0010571:30661-30680 None:intergenic 30.0%
!!! ACAGGTCCCTTTTTTTAAAT+TGG - tig0010571:30741-30760 Msa1348830:five_prime_UTR 30.0%
! TTAATAACGGAGTCTTTAGA+GGG + tig0010571:30819-30838 None:intergenic 30.0%
! ATTTCTGACCTTTCGTTTTC+TGG - tig0010571:21163-21182 Msa1348830:three_prime_UTR 35.0%
TGATTAGGGTTTGAAGATTG+GGG + tig0010571:21250-21269 None:intergenic 35.0%
GTGATTAGGGTTTGAAGATT+GGG + tig0010571:21251-21270 None:intergenic 35.0%
TCAATCGGAGATTCAAAATC+AGG - tig0010571:21297-21316 Msa1348830:three_prime_UTR 35.0%
! TGAATTGAAAGTGATGGTGA+CGG + tig0010571:21399-21418 None:intergenic 35.0%
TCACCATCACTTTCAATTCA+CGG - tig0010571:21399-21418 Msa1348830:three_prime_UTR 35.0%
TATAAATCGGTGGTGTATCA+AGG - tig0010571:21578-21597 Msa1348830:three_prime_UTR 35.0%
ATAAATCGGTGGTGTATCAA+GGG - tig0010571:21579-21598 Msa1348830:three_prime_UTR 35.0%
! TGATGTTGTTGTTCACTTCT+GGG + tig0010571:21634-21653 None:intergenic 35.0%
! TTGATGTTGTTGTTCACTTC+TGG + tig0010571:21635-21654 None:intergenic 35.0%
ATAGTATGAAGAACAGCAAG+TGG + tig0010571:21731-21750 None:intergenic 35.0%
! GATTTTGGACTAAATCTCAC+AGG - tig0010571:21905-21924 Msa1348830:CDS 35.0%
GTTCATCATCATCCATAGAT+TGG + tig0010571:21943-21962 None:intergenic 35.0%
!!! GTTGTTTTGATGAACTCAGA+TGG - tig0010571:22026-22045 Msa1348830:intron 35.0%
!! AACTCAGATGGTGGAAAAAT+TGG - tig0010571:22038-22057 Msa1348830:intron 35.0%
TTTAATACACTTTCGACCGT+CGG + tig0010571:22285-22304 None:intergenic 35.0%
TTTGGCACTGCATGATTATT+TGG - tig0010571:22403-22422 Msa1348830:intron 35.0%
ACTTAAATTTACGCGGTTAC+TGG - tig0010571:22464-22483 Msa1348830:CDS 35.0%
TGTAATTCTTCCCCATACAT+CGG + tig0010571:22614-22633 None:intergenic 35.0%
GTATGGGGAAGAATTACATT+TGG - tig0010571:22616-22635 Msa1348830:intron 35.0%
ATTTGGTTGCAATGCATTCA+CGG - tig0010571:22633-22652 Msa1348830:intron 35.0%
ACAATAAATCCCCAGAAACA+TGG + tig0010571:22671-22690 None:intergenic 35.0%
AGACGAATTATAAAGTCCTG+TGG + tig0010571:22696-22715 None:intergenic 35.0%
TTTGGGTATAGTGTTTGATC+TGG - tig0010571:22739-22758 Msa1348830:intron 35.0%
! CATTGTATTTGCTACGACAA+GGG + tig0010571:22771-22790 None:intergenic 35.0%
!! CTTCAGAGTTTACTTTTCTC+TGG + tig0010571:22823-22842 None:intergenic 35.0%
TCAATATACTCTTGTCCTCT+TGG + tig0010571:22892-22911 None:intergenic 35.0%
! TTTTCATGTAACCGTATCAG+CGG + tig0010571:23019-23038 None:intergenic 35.0%
! GCATAATTTTGTCCTTCAGT+AGG + tig0010571:23271-23290 None:intergenic 35.0%
!! TGAGGTTTTTGTTTGCACAA+TGG - tig0010571:23537-23556 Msa1348830:intron 35.0%
AAAAACAAGCACGCCATTTA+CGG + tig0010571:23671-23690 None:intergenic 35.0%
! ATTTGTAATAGAGCACCTGA+AGG - tig0010571:23728-23747 Msa1348830:intron 35.0%
!! TTGGGCCCCTAAATTTTAAT+TGG - tig0010571:23881-23900 Msa1348830:intron 35.0%
GTAATAAGGTCTCTGAACTT+AGG + tig0010571:24033-24052 None:intergenic 35.0%
AGAGATGCAAATCATTGTAC+TGG - tig0010571:24150-24169 Msa1348830:intron 35.0%
TTGTTCAATGTCTTCCAAGA+TGG - tig0010571:24253-24272 Msa1348830:intron 35.0%
TCAATTACTAACGCCATCTT+TGG + tig0010571:24289-24308 None:intergenic 35.0%
! GAAATGTTGCTTGCAATGTT+AGG - tig0010571:24549-24568 Msa1348830:intron 35.0%
! AATGTTGCTTGCAATGTTAG+GGG - tig0010571:24551-24570 Msa1348830:intron 35.0%
! GATATTTTCCAGGTTATGCA+GGG + tig0010571:24665-24684 None:intergenic 35.0%
! AGATATTTTCCAGGTTATGC+AGG + tig0010571:24666-24685 None:intergenic 35.0%
! AAATGAGTTGGAGAAAGACA+TGG - tig0010571:24708-24727 Msa1348830:CDS 35.0%
! ATGGTTTTTGATAGAACGCT+AGG - tig0010571:24727-24746 Msa1348830:intron 35.0%
! TGGTTTTTGATAGAACGCTA+GGG - tig0010571:24728-24747 Msa1348830:intron 35.0%
! TACGACTCTGATTTTGTGAT+AGG - tig0010571:24897-24916 Msa1348830:intron 35.0%
! ACGACTCTGATTTTGTGATA+GGG - tig0010571:24898-24917 Msa1348830:intron 35.0%
!! TGTGATAGGGATTTTGATGA+TGG - tig0010571:24911-24930 Msa1348830:intron 35.0%
TCATCTTCATAGGCAATTTG+AGG + tig0010571:24953-24972 None:intergenic 35.0%
! GAGCAATTATCTAGTTTCAG+AGG - tig0010571:25003-25022 Msa1348830:intron 35.0%
ACTGTATGTTTGTCTTCTAC+AGG - tig0010571:25161-25180 Msa1348830:intron 35.0%
AAACGGATCTCTATTTCCAT+AGG + tig0010571:25202-25221 None:intergenic 35.0%
!! AGAGATCCGTTTTTGTTTGA+TGG - tig0010571:25210-25229 Msa1348830:CDS 35.0%
TCTAACTTAGCAGTTGTCAT+AGG + tig0010571:25398-25417 None:intergenic 35.0%
AATTGTATCATAGATGCGTG+TGG + tig0010571:25485-25504 None:intergenic 35.0%
!!! ACTTGAACCATTGGTTTTAC+TGG + tig0010571:25539-25558 None:intergenic 35.0%
! ATGCAAGCTTGATTCTAAAG+GGG + tig0010571:25564-25583 None:intergenic 35.0%
CTATGCAAGCTTGATTCTAA+AGG + tig0010571:25566-25585 None:intergenic 35.0%
! TCAACCATCCTTTTTCTCTA+AGG - tig0010571:25874-25893 Msa1348830:intron 35.0%
TCAACCTTAGAGAAAAAGGA+TGG + tig0010571:25881-25900 None:intergenic 35.0%
!!! TCCTTTTTCTCTAAGGTTGA+TGG - tig0010571:25881-25900 Msa1348830:intron 35.0%
AACATAGTCATTACCTCCTT+TGG + tig0010571:25953-25972 None:intergenic 35.0%
! TTACAAGTGGCTCAAACTTT+TGG - tig0010571:25993-26012 Msa1348830:intron 35.0%
! AATGATAACTAGGGAGCATA+TGG + tig0010571:26091-26110 None:intergenic 35.0%
CCAGATAACGAATGATAACT+AGG + tig0010571:26101-26120 None:intergenic 35.0%
CCTAGTTATCATTCGTTATC+TGG - tig0010571:26098-26117 Msa1348830:intron 35.0%
AATACTTGTCCCTACATGTT+TGG - tig0010571:26129-26148 Msa1348830:intron 35.0%
GAGAATCAACCAAACATGTA+GGG + tig0010571:26141-26160 None:intergenic 35.0%
AGAGAATCAACCAAACATGT+AGG + tig0010571:26142-26161 None:intergenic 35.0%
TACATGAGAAGCAAATGCTT+GGG + tig0010571:26176-26195 None:intergenic 35.0%
TGACTGTGACTGCATTTATT+TGG - tig0010571:26203-26222 Msa1348830:CDS 35.0%
! GAAGTCACTTTAATTCAGCA+TGG + tig0010571:26274-26293 None:intergenic 35.0%
AGGTAAATCAAGGAAGACAA+AGG + tig0010571:26441-26460 None:intergenic 35.0%
! TCCTTGATTTACCTTTTCAC+TGG - tig0010571:26447-26466 Msa1348830:CDS 35.0%
TCCAGTGAAAAGGTAAATCA+AGG + tig0010571:26451-26470 None:intergenic 35.0%
ATGCTTTATGTCCAGTGAAA+AGG + tig0010571:26461-26480 None:intergenic 35.0%
CATGAGATATTGTCACTCTA+AGG + tig0010571:26582-26601 None:intergenic 35.0%
CTTAGAGTGACAATATCTCA+TGG - tig0010571:26580-26599 Msa1348830:CDS 35.0%
ATTTCCTGTAATACTGCAAC+TGG + tig0010571:26706-26725 None:intergenic 35.0%
TCAGAAGCAAAGAAACATGT+TGG + tig0010571:26849-26868 None:intergenic 35.0%
GGTGGAATATACATCATCTT+TGG - tig0010571:26877-26896 Msa1348830:CDS 35.0%
! AATTTCTAGGTTTGTTTCCC+CGG + tig0010571:27223-27242 None:intergenic 35.0%
TTAATTGATCTTTCGGTTGG+CGG - tig0010571:27242-27261 Msa1348830:intron 35.0%
TGATTCCATCTTACTTCCTT+TGG - tig0010571:27273-27292 Msa1348830:intron 35.0%
TCAACTAATGACTACTCCAA+AGG + tig0010571:27292-27311 None:intergenic 35.0%
TAAGTGTCACCATTATTTGC+AGG - tig0010571:27357-27376 Msa1348830:intron 35.0%
!! TGGTTTTCTGGGAAAAAAGT+TGG - tig0010571:27382-27401 Msa1348830:intron 35.0%
CTATTAAACATTTGGCAGGT+AGG - tig0010571:27458-27477 Msa1348830:intron 35.0%
! AGGTAGGACATTCCTAATTT+TGG - tig0010571:27474-27493 Msa1348830:intron 35.0%
ACCCCTCTTTATAGGATATT+AGG + tig0010571:27702-27721 None:intergenic 35.0%
TTACAAGACTCTGCTATCTA+AGG - tig0010571:27728-27747 Msa1348830:CDS 35.0%
! CATTTTTGTAGGAACAACAC+CGG + tig0010571:27755-27774 None:intergenic 35.0%
AGTCTCAGTATTAACCCAAT+GGG + tig0010571:27849-27868 None:intergenic 35.0%
AAGTCTCAGTATTAACCCAA+TGG + tig0010571:27850-27869 None:intergenic 35.0%
TACTAAATGGCACAAATAGC+CGG - tig0010571:27869-27888 Msa1348830:intron 35.0%
!! TACAGATCGAGCTTTTTAAG+AGG - tig0010571:27972-27991 Msa1348830:intron 35.0%
!! ACAGATCGAGCTTTTTAAGA+GGG - tig0010571:27973-27992 Msa1348830:intron 35.0%
! TTCTCTCAAGTTTTCTCAAG+TGG - tig0010571:28019-28038 Msa1348830:intron 35.0%
TATTATCCTTGCTTCAAGCT+TGG - tig0010571:28229-28248 Msa1348830:intron 35.0%
ATTACATGGCAGCCAAAAAA+TGG + tig0010571:28301-28320 None:intergenic 35.0%
! TAACCGTTGTCATTTGCATT+AGG + tig0010571:28682-28701 None:intergenic 35.0%
GTTGGAAGTTAAGAGATCAA+CGG - tig0010571:28801-28820 Msa1348830:intron 35.0%
TTGGAAGTTAAGAGATCAAC+GGG - tig0010571:28802-28821 Msa1348830:intron 35.0%
!! GAATTTGTTAACATTGGAGC+AGG + tig0010571:29004-29023 None:intergenic 35.0%
ATAACCATTCTGCGATTCAA+TGG + tig0010571:29116-29135 None:intergenic 35.0%
ATGACTGAACTAAAACACAC+AGG + tig0010571:29153-29172 None:intergenic 35.0%
ACTAAATGAAATCTGGGCTT+AGG - tig0010571:29375-29394 Msa1348830:CDS 35.0%
TGGGGTAGTAATCTTGTTAA+TGG - tig0010571:29400-29419 Msa1348830:CDS 35.0%
TCTTGTTAATGGTGTACTTG+TGG - tig0010571:29411-29430 Msa1348830:CDS 35.0%
CCATCTATCTCAACCTAAAA+TGG + tig0010571:29581-29600 None:intergenic 35.0%
!!! CCATTTTAGGTTGAGATAGA+TGG - tig0010571:29578-29597 Msa1348830:intron 35.0%
TCAAATTCTATACTGGCCAA+TGG - tig0010571:30006-30025 Msa1348830:intron 35.0%
TTATTCGAGAATCCCTGAAA+TGG + tig0010571:30180-30199 None:intergenic 35.0%
! AATCCTGTTTCTCTTGTCAA+GGG + tig0010571:30281-30300 None:intergenic 35.0%
! AAATCCTGTTTCTCTTGTCA+AGG + tig0010571:30282-30301 None:intergenic 35.0%
TTACTGGTATGACTGTTGTT+GGG - tig0010571:30312-30331 Msa1348830:CDS 35.0%
! TTCTATATTGGCATTGAGCT+CGG + tig0010571:30433-30452 None:intergenic 35.0%
TTCAGTGGAGGATAATACAA+TGG + tig0010571:30473-30492 None:intergenic 35.0%
ATTATCCTCCACTGAAATAG+AGG - tig0010571:30477-30496 Msa1348830:CDS 35.0%
! CAACCAATACTCCATTGATT+GGG + tig0010571:30553-30572 None:intergenic 35.0%
CATCATCTTGTCTTGTAAAC+CGG + tig0010571:30599-30618 None:intergenic 35.0%
GTTTACAAGACAAGATGATG+AGG - tig0010571:30599-30618 Msa1348830:five_prime_UTR 35.0%
!!! CTTTTTTCGCTAACATAACC+CGG - tig0010571:30770-30789 Msa1348830:five_prime_UTR 35.0%
! TAATAACGGAGTCTTTAGAG+GGG + tig0010571:30818-30837 None:intergenic 35.0%
! GTTAATAACGGAGTCTTTAG+AGG + tig0010571:30820-30839 None:intergenic 35.0%
! ACCTTTCGTTTTCTGGATCT+AGG - tig0010571:21170-21189 Msa1348830:three_prime_UTR 40.0%
! CCTTTCGTTTTCTGGATCTA+GGG - tig0010571:21171-21190 Msa1348830:three_prime_UTR 40.0%
GGTGATTAGGGTTTGAAGAT+TGG + tig0010571:21252-21271 None:intergenic 40.0%
!! TTGTAGTATTGATTAGGGGG+AGG + tig0010571:21276-21295 None:intergenic 40.0%
GATCCGTGAATTGAAAGTGA+TGG + tig0010571:21405-21424 None:intergenic 40.0%
TAAATCGGTGGTGTATCAAG+GGG - tig0010571:21580-21599 Msa1348830:three_prime_UTR 40.0%
CTTGTTCTCTCTGATACACA+AGG + tig0010571:21819-21838 None:intergenic 40.0%
CTTGTGTATCAGAGAGAACA+AGG - tig0010571:21817-21836 Msa1348830:exon 40.0%
!! GTTTTGATGAACTCAGATGG+TGG - tig0010571:22029-22048 Msa1348830:intron 40.0%
ACCGAGACTCCCAATTAATT+GGG - tig0010571:22095-22114 Msa1348830:intron 40.0%
! GCATTGTATTTGCTACGACA+AGG + tig0010571:22772-22791 None:intergenic 40.0%
AAATACAATGCGCTCATTCG+AGG - tig0010571:22781-22800 Msa1348830:intron 40.0%
GTAGATCCACAACGAATTTC+TGG - tig0010571:22842-22861 Msa1348830:intron 40.0%
GCAGTATGCTGAAAATGATC+AGG - tig0010571:22913-22932 Msa1348830:intron 40.0%
AGATAATGCTGGAACAAGCT+CGG + tig0010571:22972-22991 None:intergenic 40.0%
TGATGACTGTCAGATAATGC+TGG + tig0010571:22983-23002 None:intergenic 40.0%
ATGTTACGATCCACGAATTC+CGG + tig0010571:23238-23257 None:intergenic 40.0%
TTACGCATGTGTGTTTGTGT+AGG + tig0010571:23293-23312 None:intergenic 40.0%
GTGATACAAGTGTTCTTGTG+AGG - tig0010571:23455-23474 Msa1348830:CDS 40.0%
TTGTTTGCACAATGGCTGAA+AGG - tig0010571:23545-23564 Msa1348830:intron 40.0%
TGTTTGCACAATGGCTGAAA+GGG - tig0010571:23546-23565 Msa1348830:intron 40.0%
TGGTATGGTCCCAAATTACA+TGG + tig0010571:23932-23951 None:intergenic 40.0%
ATCAGAAGTAGCAGAAACAC+GGG + tig0010571:24176-24195 None:intergenic 40.0%
CATCAGAAGTAGCAGAAACA+CGG + tig0010571:24177-24196 None:intergenic 40.0%
TTACTAACGCCATCTTTGGA+TGG + tig0010571:24285-24304 None:intergenic 40.0%
AGCAAATTTACCTCAGCTTG+AGG + tig0010571:24388-24407 None:intergenic 40.0%
TCAAGCTGAGGTAAATTTGC+TGG - tig0010571:24387-24406 Msa1348830:intron 40.0%
TTCTTGCAACGCATAAGACA+GGG + tig0010571:24532-24551 None:intergenic 40.0%
TTTCTTGCAACGCATAAGAC+AGG + tig0010571:24533-24552 None:intergenic 40.0%
TAGATAATTGCTCACGTCAG+GGG + tig0010571:24996-25015 None:intergenic 40.0%
CTAGATAATTGCTCACGTCA+GGG + tig0010571:24997-25016 None:intergenic 40.0%
ACTAGATAATTGCTCACGTC+AGG + tig0010571:24998-25017 None:intergenic 40.0%
!! TCCGTTTTTGTTTGATGGCA+TGG - tig0010571:25215-25234 Msa1348830:CDS 40.0%
GCCATGCCATCAAACAAAAA+CGG + tig0010571:25219-25238 None:intergenic 40.0%
TATTCACTCGGAGGTAAGAT+TGG + tig0010571:25273-25292 None:intergenic 40.0%
GTTCTCAAATATTCACTCGG+AGG + tig0010571:25282-25301 None:intergenic 40.0%
CAGTATACAATGGTATCTCC+TGG - tig0010571:25440-25459 Msa1348830:CDS 40.0%
!!! ATTGGTTTTACTGGTGTAGC+AGG + tig0010571:25530-25549 None:intergenic 40.0%
TGCTACACCAGTAAAACCAA+TGG - tig0010571:25529-25548 Msa1348830:intron 40.0%
CAGAATTAGACCCAGATACA+AGG - tig0010571:25621-25640 Msa1348830:intron 40.0%
AGGCTTCTCATATTGCAACA+TGG - tig0010571:25647-25666 Msa1348830:intron 40.0%
TGCAACATGGACAAGATGTT+AGG - tig0010571:25660-25679 Msa1348830:intron 40.0%
GCAACATGGACAAGATGTTA+GGG - tig0010571:25661-25680 Msa1348830:intron 40.0%
TTTCCTGTAGAAGAGGAGAT+TGG - tig0010571:25770-25789 Msa1348830:intron 40.0%
TCTTTAGGTAGTACCCTGTT+TGG + tig0010571:25806-25825 None:intergenic 40.0%
! GAGAAAAAGGATGGTTGATG+AGG + tig0010571:25872-25891 None:intergenic 40.0%
GCCATCAACCTTAGAGAAAA+AGG + tig0010571:25885-25904 None:intergenic 40.0%
ACATGAGAAGCAAATGCTTG+GGG + tig0010571:26175-26194 None:intergenic 40.0%
GTACATGAGAAGCAAATGCT+TGG + tig0010571:26177-26196 None:intergenic 40.0%
AGCAAAAGAAACACACACAG+AGG + tig0010571:26531-26550 None:intergenic 40.0%
! AGATATTGTCACTCTAAGGG+TGG + tig0010571:26578-26597 None:intergenic 40.0%
TCTCATGGTTGTTCTTATGC+AGG - tig0010571:26595-26614 Msa1348830:CDS 40.0%
TAGAAGATGACCTACCAAAG+GGG + tig0010571:26630-26649 None:intergenic 40.0%
CTAGAAGATGACCTACCAAA+GGG + tig0010571:26631-26650 None:intergenic 40.0%
AACACCAGTTGCAGTATTAC+AGG - tig0010571:26699-26718 Msa1348830:CDS 40.0%
TAGAATGAAGGATACCTCCA+TGG + tig0010571:26927-26946 None:intergenic 40.0%
! AAGGTATCATGAAGTCATGC+TGG + tig0010571:26951-26970 None:intergenic 40.0%
GGTATAGTCTGCAACTATGT+AGG + tig0010571:27137-27156 None:intergenic 40.0%
CTACTCCAAAGGAAGTAAGA+TGG + tig0010571:27281-27300 None:intergenic 40.0%
TGACACTTACAAGATGACGA+AGG + tig0010571:27346-27365 None:intergenic 40.0%
AAAACCACGCCTGCAAATAA+TGG + tig0010571:27369-27388 None:intergenic 40.0%
AAAAAAGTTGGCCAGGGATT+TGG - tig0010571:27394-27413 Msa1348830:intron 40.0%
! TAGAATGGAAGCGCGATATA+AGG - tig0010571:27423-27442 Msa1348830:intron 40.0%
GTCTCAGTATTAACCCAATG+GGG + tig0010571:27848-27867 None:intergenic 40.0%
AAGCTCGATCTGTAACGAAA+AGG + tig0010571:27966-27985 None:intergenic 40.0%
!! CGAGCTTTTTAAGAGGGATT+TGG - tig0010571:27979-27998 Msa1348830:intron 40.0%
TGCAAATGACAACGGTTATG+TGG - tig0010571:28684-28703 Msa1348830:intron 40.0%
GCAAATGACAACGGTTATGT+GGG - tig0010571:28685-28704 Msa1348830:intron 40.0%
! GTGGGTAATGTTAGTTCTCT+TGG - tig0010571:28703-28722 Msa1348830:intron 40.0%
! CTAGGATCTAAAACCCTTGA+TGG + tig0010571:28781-28800 None:intergenic 40.0%
!!! CATCAAGGGTTTTAGATCCT+AGG - tig0010571:28779-28798 Msa1348830:intron 40.0%
!!! AAGGGTTTTAGATCCTAGGT+TGG - tig0010571:28783-28802 Msa1348830:intron 40.0%
GATCTCTTAACTTCCAACCT+AGG + tig0010571:28799-28818 None:intergenic 40.0%
GAATCTCACCAATTCCTTGA+GGG + tig0010571:28839-28858 None:intergenic 40.0%
TGAATCTCACCAATTCCTTG+AGG + tig0010571:28840-28859 None:intergenic 40.0%
! TTTTCTTCAGTGCATGATGG+AGG - tig0010571:28952-28971 Msa1348830:intron 40.0%
! TTTCTTCAGTGCATGATGGA+GGG - tig0010571:28953-28972 Msa1348830:intron 40.0%
GAAAGATGAAGTATACGCAC+AGG - tig0010571:29030-29049 Msa1348830:intron 40.0%
AATGCCATTGAATCGCAGAA+TGG - tig0010571:29109-29128 Msa1348830:CDS 40.0%
! GAGAGACATTTTGTTGACGT+TGG - tig0010571:29200-29219 Msa1348830:CDS 40.0%
TCATCCTTCATAAGCACCAT+GGG + tig0010571:29437-29456 None:intergenic 40.0%
GTGCTTGGTTAAACATTTCC+AGG + tig0010571:29460-29479 None:intergenic 40.0%
! CCAGAACTAAACAAAGTGCT+TGG + tig0010571:29475-29494 None:intergenic 40.0%
! CCAAGCACTTTGTTTAGTTC+TGG - tig0010571:29472-29491 Msa1348830:CDS 40.0%
TAAAGGGACCGGATTAACAT+GGG - tig0010571:29613-29632 Msa1348830:intron 40.0%
GGAAGTCTAAGAACAATGCA+TGG - tig0010571:29790-29809 Msa1348830:intron 40.0%
TGTGCTAGATTTAGAAAGCC+CGG + tig0010571:29944-29963 None:intergenic 40.0%
AGATGCCAATTCTGTCTGTA+GGG + tig0010571:30041-30060 None:intergenic 40.0%
TAGATGCCAATTCTGTCTGT+AGG + tig0010571:30042-30061 None:intergenic 40.0%
TATGTGAATCAGGCCATTTC+AGG - tig0010571:30164-30183 Msa1348830:intron 40.0%
ATGTGAATCAGGCCATTTCA+GGG - tig0010571:30165-30184 Msa1348830:intron 40.0%
CATCTTCTGGTAGATATCCT+AGG - tig0010571:30241-30260 Msa1348830:intron 40.0%
AATCCCTTGACAAGAGAAAC+AGG - tig0010571:30275-30294 Msa1348830:intron 40.0%
! GGATTTTCAGTCTCACTTAC+TGG - tig0010571:30296-30315 Msa1348830:CDS 40.0%
CTTACTGGTATGACTGTTGT+TGG - tig0010571:30311-30330 Msa1348830:CDS 40.0%
TACTGGTATGACTGTTGTTG+GGG - tig0010571:30313-30332 Msa1348830:CDS 40.0%
TGATTCAACAATGTGAAGGG+TGG - tig0010571:30356-30375 Msa1348830:CDS 40.0%
TGGGACCATTTCAACTTAAG+TGG - tig0010571:30391-30410 Msa1348830:CDS 40.0%
GGGACCATTTCAACTTAAGT+GGG - tig0010571:30392-30411 Msa1348830:CDS 40.0%
CCATTTCAACTTAAGTGGGT+CGG - tig0010571:30396-30415 Msa1348830:CDS 40.0%
! ATCTTGATGGTCCCAATCAA+TGG - tig0010571:30539-30558 Msa1348830:exon 40.0%
GCAACCAATACTCCATTGAT+TGG + tig0010571:30554-30573 None:intergenic 40.0%
GAGTATGCATTGCATTGCAT+TGG + tig0010571:30630-30649 None:intergenic 40.0%
CTAGTACAACCATTCAGTAC+AGG - tig0010571:30723-30742 Msa1348830:five_prime_UTR 40.0%
AAAAAGGGACCTGTACTGAA+TGG + tig0010571:30735-30754 None:intergenic 40.0%
CCTCGAGACTCTGTTAATAA+CGG + tig0010571:30832-30851 None:intergenic 40.0%
TATTAACAGAGTCTCGAGGT+TGG - tig0010571:30833-30852 Msa1348830:five_prime_UTR 40.0%
CCCTAGATCCAGAAAACGAA+AGG + tig0010571:21174-21193 None:intergenic 45.0%
!! TAGTATTGATTAGGGGGAGG+TGG + tig0010571:21273-21292 None:intergenic 45.0%
TATCAAGGGGAGGTGATGTT+GGG - tig0010571:21593-21612 Msa1348830:three_prime_UTR 45.0%
! ACTTTTCTCAACCCAGTGAG+AGG - tig0010571:21699-21718 Msa1348830:three_prime_UTR 45.0%
! GCAAGTGTAAGAGCTGATTC+TGG + tig0010571:21793-21812 None:intergenic 45.0%
CAATTAATTGGGAGTCTCGG+TGG + tig0010571:22096-22115 None:intergenic 45.0%
CACCGAGACTCCCAATTAAT+TGG - tig0010571:22094-22113 Msa1348830:intron 45.0%
CCCCAATTAATTGGGAGTCT+CGG + tig0010571:22099-22118 None:intergenic 45.0%
CCGAGACTCCCAATTAATTG+GGG - tig0010571:22096-22115 Msa1348830:intron 45.0%
AGTGAAATTAGTGTCTGGGC+TGG - tig0010571:22201-22220 Msa1348830:intron 45.0%
!! AATTAGTGTCTGGGCTGGTT+AGG - tig0010571:22206-22225 Msa1348830:intron 45.0%
!! ATTAGTGTCTGGGCTGGTTA+GGG - tig0010571:22207-22226 Msa1348830:intron 45.0%
!!! AATCGCGATTTTGGTTCCGA+CGG - tig0010571:22266-22285 Msa1348830:intron 45.0%
GCACTGCATGATTATTTGGC+TGG - tig0010571:22407-22426 Msa1348830:intron 45.0%
CCGATAACTGCATAGGTAAC+CGG + tig0010571:22510-22529 None:intergenic 45.0%
CCGGTTACCTATGCAGTTAT+CGG - tig0010571:22507-22526 Msa1348830:CDS 45.0%
AAGGTGACCGATAACTGCAT+AGG + tig0010571:22517-22536 None:intergenic 45.0%
ACAGCTGTTATGCCGATGTA+TGG - tig0010571:22599-22618 Msa1348830:intron 45.0%
CAGCTGTTATGCCGATGTAT+GGG - tig0010571:22600-22619 Msa1348830:intron 45.0%
AGCTGTTATGCCGATGTATG+GGG - tig0010571:22601-22620 Msa1348830:intron 45.0%
ATGACGACAGACCATGTTTC+TGG - tig0010571:22657-22676 Msa1348830:intron 45.0%
TGACGACAGACCATGTTTCT+GGG - tig0010571:22658-22677 Msa1348830:intron 45.0%
TGGGGATTTATTGTTGCCAC+AGG - tig0010571:22677-22696 Msa1348830:intron 45.0%
TGCATGCCAGAAATTCGTTG+TGG + tig0010571:22851-22870 None:intergenic 45.0%
!! ACAACGAATTTCTGGCATGC+AGG - tig0010571:22850-22869 Msa1348830:intron 45.0%
AAACGAAAATGCAGAGCGAC+AGG + tig0010571:23131-23150 None:intergenic 45.0%
CTACAGGGTTTGACTACACT+GGG + tig0010571:23175-23194 None:intergenic 45.0%
ACTACAGGGTTTGACTACAC+TGG + tig0010571:23176-23195 None:intergenic 45.0%
CATGATCCAGCTTGACTACA+GGG + tig0010571:23190-23209 None:intergenic 45.0%
TTTCACACCTTCCTGATCCT+AGG + tig0010571:23213-23232 None:intergenic 45.0%
! ATCAGGAAGGTGTGAAAGAC+CGG - tig0010571:23216-23235 Msa1348830:intron 45.0%
GGAATTCGTGGATCGTAACA+TGG - tig0010571:23237-23256 Msa1348830:intron 45.0%
ATGGATCGAGATCCTACTGA+AGG - tig0010571:23256-23275 Msa1348830:intron 45.0%
GGGACTATGCACTAGAAATG+TGG - tig0010571:23566-23585 Msa1348830:intron 45.0%
CGCATTGTATGCGTTAAGTC+CGG - tig0010571:23640-23659 Msa1348830:intron 45.0%
AAGTCCGGTAAGTCCGTAAA+TGG - tig0010571:23655-23674 Msa1348830:intron 45.0%
! GTTCACAGTTTGCTTCCTTC+AGG + tig0010571:23746-23765 None:intergenic 45.0%
GGAAGCAAACTGTGAACATG+AGG - tig0010571:23749-23768 Msa1348830:intron 45.0%
TTGACGATCGCTTGAAAGTG+TGG - tig0010571:24305-24324 Msa1348830:intron 45.0%
! TGACGATCGCTTGAAAGTGT+GGG - tig0010571:24306-24325 Msa1348830:intron 45.0%
GGGATGAGAAAGATCAACCT+CGG - tig0010571:24326-24345 Msa1348830:intron 45.0%
GGATGAGAAAGATCAACCTC+GGG - tig0010571:24327-24346 Msa1348830:intron 45.0%
GCATAGTATGGAGCAAATGC+AGG + tig0010571:24364-24383 None:intergenic 45.0%
! TCAGCTTGAGGAGCATAGTA+TGG + tig0010571:24376-24395 None:intergenic 45.0%
ATACTATGCTCCTCAAGCTG+AGG - tig0010571:24375-24394 Msa1348830:intron 45.0%
!! GGTAAATTTGCTGGCACACA+TGG - tig0010571:24396-24415 Msa1348830:intron 45.0%
!! AATTTGCTGGCACACATGGT+TGG - tig0010571:24400-24419 Msa1348830:intron 45.0%
CTCAATTTCCCTGCATAACC+TGG - tig0010571:24654-24673 Msa1348830:CDS 45.0%
! AAAGCCTTATCCCACCAAGT+GGG + tig0010571:24778-24797 None:intergenic 45.0%
GTTTGTCTTCTACAGGACGA+TGG - tig0010571:25168-25187 Msa1348830:intron 45.0%
CAACTGCTAAGTTAGATCCC+AGG - tig0010571:25402-25421 Msa1348830:CDS 45.0%
TGAAGAGAAGAAGTGAGCCT+GGG + tig0010571:25422-25441 None:intergenic 45.0%
! TTACTGGTGTAGCAGGTTGA+AGG + tig0010571:25523-25542 None:intergenic 45.0%
AAAGGGGCAACTTGAACCAT+TGG + tig0010571:25548-25567 None:intergenic 45.0%
AGTTCTCCTGCTAGAGAAGA+AGG - tig0010571:25584-25603 Msa1348830:intron 45.0%
GTTCTCCTGCTAGAGAAGAA+GGG - tig0010571:25585-25604 Msa1348830:intron 45.0%
TTCTCCTGCTAGAGAAGAAG+GGG - tig0010571:25586-25605 Msa1348830:intron 45.0%
! TTGGGGTGTCTAATGGGAAA+TGG + tig0010571:25707-25726 None:intergenic 45.0%
! ACAGGATTGGGGTGTCTAAT+GGG + tig0010571:25713-25732 None:intergenic 45.0%
! TACAGGATTGGGGTGTCTAA+TGG + tig0010571:25714-25733 None:intergenic 45.0%
CGGAAACTTGTACAGGATTG+GGG + tig0010571:25724-25743 None:intergenic 45.0%
GCGGAAACTTGTACAGGATT+GGG + tig0010571:25725-25744 None:intergenic 45.0%
AGCGGAAACTTGTACAGGAT+TGG + tig0010571:25726-25745 None:intergenic 45.0%
GAACCAATCTCCTCTTCTAC+AGG + tig0010571:25776-25795 None:intergenic 45.0%
TTGGTTCACAACCACCAAAC+AGG - tig0010571:25789-25808 Msa1348830:intron 45.0%
TGGTTCACAACCACCAAACA+GGG - tig0010571:25790-25809 Msa1348830:intron 45.0%
TTAGGTAGTACCCTGTTTGG+TGG + tig0010571:25803-25822 None:intergenic 45.0%
AGATTCTGGTCCATCACGTA+TGG - tig0010571:25835-25854 Msa1348830:intron 45.0%
!! AAAAGGATGGTTGATGAGGC+CGG + tig0010571:25868-25887 None:intergenic 45.0%
TTACCTCCTTTGGCAATCTC+TGG + tig0010571:25943-25962 None:intergenic 45.0%
CTCTTGAGCGATCATCTCTA+TGG + tig0010571:26064-26083 None:intergenic 45.0%
! GAGTGAGCTTTTGTTGCAGT+TGG - tig0010571:26246-26265 Msa1348830:CDS 45.0%
GCTAGAAGATGACCTACCAA+AGG + tig0010571:26632-26651 None:intergenic 45.0%
TAGGTCATCTTCTAGCCACA+GGG - tig0010571:26636-26655 Msa1348830:CDS 45.0%
ATTCAGAGTCAAGATCCCTG+TGG + tig0010571:26654-26673 None:intergenic 45.0%
AGGGATCTTGACTCTGAATC+TGG - tig0010571:26655-26674 Msa1348830:CDS 45.0%
CAGGAAATTGCACTGAAGTG+TGG - tig0010571:26718-26737 Msa1348830:CDS 45.0%
TGCACTGAAGTGTGGAACTA+AGG - tig0010571:26726-26745 Msa1348830:CDS 45.0%
TCTTTGCTTCTGATGTGAGC+AGG - tig0010571:26856-26875 Msa1348830:CDS 45.0%
! AGTCATGCTGGCTAGAATGA+AGG + tig0010571:26939-26958 None:intergenic 45.0%
! TATTTGCAGGCGTGGTTTTC+TGG - tig0010571:27370-27389 Msa1348830:intron 45.0%
! ATTTGCAGGCGTGGTTTTCT+GGG - tig0010571:27371-27390 Msa1348830:intron 45.0%
! TTCTGGGAAAAAAGTTGGCC+AGG - tig0010571:27387-27406 Msa1348830:intron 45.0%
TCTGGGAAAAAAGTTGGCCA+GGG - tig0010571:27388-27407 Msa1348830:intron 45.0%
!! TTCTAGTTCTGCCAAATCCC+TGG + tig0010571:27408-27427 None:intergenic 45.0%
GGGATTTGGCAGAACTAGAA+TGG - tig0010571:27408-27427 Msa1348830:intron 45.0%
AGACTCTGCTATCTAAGGAC+CGG - tig0010571:27733-27752 Msa1348830:CDS 45.0%
TAAATGGCACAAATAGCCGG+AGG - tig0010571:27872-27891 Msa1348830:intron 45.0%
AAATGGCACAAATAGCCGGA+GGG - tig0010571:27873-27892 Msa1348830:intron 45.0%
GACCTTGTCAGAGATCCAAA+GGG - tig0010571:27928-27947 Msa1348830:intron 45.0%
TACCCTTTGGATCTCTGACA+AGG + tig0010571:27933-27952 None:intergenic 45.0%
GTCAGAGATCCAAAGGGTAA+AGG - tig0010571:27934-27953 Msa1348830:intron 45.0%
AGGTCATTGCCTTTACCCTT+TGG + tig0010571:27946-27965 None:intergenic 45.0%
ATCCTTGCTTCAAGCTTGGA+AGG - tig0010571:28233-28252 Msa1348830:intron 45.0%
GTATGGGTATGCCTTTAGCT+AGG - tig0010571:28358-28377 Msa1348830:intron 45.0%
! CTAGCTTTCCTCCTAGCTAA+AGG + tig0010571:28372-28391 None:intergenic 45.0%
CTTTAGCTAGGAGGAAAGCT+AGG - tig0010571:28370-28389 Msa1348830:intron 45.0%
ACATCACCATATGCAGAACC+AGG + tig0010571:28649-28668 None:intergenic 45.0%
! TCTGCATATGGTGATGTGAG+TGG - tig0010571:28652-28671 Msa1348830:intron 45.0%
AATGAGACTGCCTCCTCTTT+AGG + tig0010571:28742-28761 None:intergenic 45.0%
AGCTGCATCAGATCCATCAA+GGG - tig0010571:28765-28784 Msa1348830:intron 45.0%
!! ATGGTTCTGGGGAGATAAGT+TGG + tig0010571:28874-28893 None:intergenic 45.0%
GATGAAGTATACGCACAGGT+TGG - tig0010571:29034-29053 Msa1348830:intron 45.0%
! TTGGTAACCAAATGCCTCAG+TGG - tig0010571:29053-29072 Msa1348830:CDS 45.0%
!! TGTTAGGCAATTTGGTGTCC+AGG - tig0010571:29243-29262 Msa1348830:CDS 45.0%
AAGTTGAAGCCGTGAGTGTT+GGG - tig0010571:29337-29356 Msa1348830:CDS 45.0%
GAATTTCCACCCAACACTCA+CGG + tig0010571:29349-29368 None:intergenic 45.0%
ATGAAATCTGGGCTTAGGCA+TGG - tig0010571:29380-29399 Msa1348830:CDS 45.0%
TGAAATCTGGGCTTAGGCAT+GGG - tig0010571:29381-29400 Msa1348830:CDS 45.0%
GTCATCCTTCATAAGCACCA+TGG + tig0010571:29438-29457 None:intergenic 45.0%
!! TTAGGTTGAGATAGATGGCC+AGG - tig0010571:29583-29602 Msa1348830:intron 45.0%
ATGGCCAGGTCTATGGTAAA+GGG - tig0010571:29597-29616 Msa1348830:intron 45.0%
GTAAAGGGACCGGATTAACA+TGG - tig0010571:29612-29631 Msa1348830:intron 45.0%
CCTATACTCTCCAAATGTGC+CGG - tig0010571:29922-29941 Msa1348830:intron 45.0%
CTATACTCTCCAAATGTGCC+GGG - tig0010571:29923-29942 Msa1348830:intron 45.0%
TTTAGAAAGCCCGGCACATT+TGG + tig0010571:29935-29954 None:intergenic 45.0%
GATGCCAATTCTGTCTGTAG+GGG + tig0010571:30040-30059 None:intergenic 45.0%
TTCTCTTGTCAAGGGATTGC+TGG + tig0010571:30273-30292 None:intergenic 45.0%
TTCAACAATGTGAAGGGTGG+TGG - tig0010571:30359-30378 Msa1348830:CDS 45.0%
!! CCGACCCACTTAAGTTGAAA+TGG + tig0010571:30399-30418 None:intergenic 45.0%
GTACCTCACCTCTATTTCAG+TGG + tig0010571:30488-30507 None:intergenic 45.0%
CTGAAATAGAGGTGAGGTAC+TGG - tig0010571:30488-30507 Msa1348830:CDS 45.0%
GGTCCCAATCAATGGAGTAT+TGG - tig0010571:30547-30566 Msa1348830:five_prime_UTR 45.0%
!! GGAGTATTGGTTGCATTGTG+TGG - tig0010571:30560-30579 Msa1348830:five_prime_UTR 45.0%
AAGGTGATAGAACCACTACC+GGG + tig0010571:30791-30810 None:intergenic 45.0%
CAAGGTGATAGAACCACTAC+CGG + tig0010571:30792-30811 None:intergenic 45.0%
CCGTTATTAACAGAGTCTCG+AGG - tig0010571:30829-30848 Msa1348830:five_prime_UTR 45.0%
!! AATTAAATTAATTAAAAAGA+TGG - tig0010571:21857-21876 Msa1348830:CDS 5.0%
!!! ATTTTTATTTAATTTTTTAC+CGG - tig0010571:27201-27220 Msa1348830:intron 5.0%
!! AATTAAATTATAAAAAAAAG+TGG - tig0010571:28076-28095 Msa1348830:intron 5.0%
TTAGGGGGAGGTGGTGATTA+GGG + tig0010571:21264-21283 None:intergenic 50.0%
ATTAGGGGGAGGTGGTGATT+AGG + tig0010571:21265-21284 None:intergenic 50.0%
!! AGTGATGGTGACGGCGATTT+GGG + tig0010571:21390-21409 None:intergenic 50.0%
!! AAGTGATGGTGACGGCGATT+TGG + tig0010571:21391-21410 None:intergenic 50.0%
GTATCAAGGGGAGGTGATGT+TGG - tig0010571:21592-21611 Msa1348830:three_prime_UTR 50.0%
AGTGGTGAACACCTCTCACT+GGG + tig0010571:21713-21732 None:intergenic 50.0%
AAGTGGTGAACACCTCTCAC+TGG + tig0010571:21714-21733 None:intergenic 50.0%
CTGCATAGGTAACCGGTAAC+CGG + tig0010571:22503-22522 None:intergenic 50.0%
! GACGACAGACCATGTTTCTG+GGG - tig0010571:22659-22678 Msa1348830:intron 50.0%
!! ACGAATTTCTGGCATGCAGG+CGG - tig0010571:22853-22872 Msa1348830:intron 50.0%
CGTATCAGCGGTCGAACTAT+GGG + tig0010571:23007-23026 None:intergenic 50.0%
CCATAGTTCGACCGCTGATA+CGG - tig0010571:23005-23024 Msa1348830:intron 50.0%
TTTGACACGCATCAATCCGC+AGG - tig0010571:23048-23067 Msa1348830:intron 50.0%
GTCAAACCCTGTAGTCAAGC+TGG - tig0010571:23181-23200 Msa1348830:intron 50.0%
GCATGATCCAGCTTGACTAC+AGG + tig0010571:23191-23210 None:intergenic 50.0%
AGTCAAGCTGGATCATGCCT+AGG - tig0010571:23193-23212 Msa1348830:intron 50.0%
GATCATGCCTAGGATCAGGA+AGG - tig0010571:23203-23222 Msa1348830:intron 50.0%
GTGTGAAAGACCGGAATTCG+TGG - tig0010571:23225-23244 Msa1348830:intron 50.0%
TTGTGAGGTTGAGACCTGCA+TGG - tig0010571:23470-23489 Msa1348830:CDS 50.0%
TGTGAGGTTGAGACCTGCAT+GGG - tig0010571:23471-23490 Msa1348830:CDS 50.0%
GACCTGCATGGGAAGATCTT+CGG - tig0010571:23482-23501 Msa1348830:intron 50.0%
GGAGCTACCTGATTGCAAGA+GGG - tig0010571:23503-23522 Msa1348830:intron 50.0%
CACGCCATTTACGGACTTAC+CGG + tig0010571:23662-23681 None:intergenic 50.0%
TTGGATGGCATGAGCCATCT+TGG + tig0010571:24270-24289 None:intergenic 50.0%
TGGCTCATGCCATCCAAAGA+TGG - tig0010571:24273-24292 Msa1348830:intron 50.0%
GTTGCTTGCAATGTTAGGGG+TGG - tig0010571:24554-24573 Msa1348830:intron 50.0%
TTCATGTAGCAGACCCCACT+TGG - tig0010571:24761-24780 Msa1348830:intron 50.0%
! AAGCCTTATCCCACCAAGTG+GGG + tig0010571:24777-24796 None:intergenic 50.0%
! CAAAGCCTTATCCCACCAAG+TGG + tig0010571:24779-24798 None:intergenic 50.0%
! CACTTGGTGGGATAAGGCTT+TGG - tig0010571:24777-24796 Msa1348830:intron 50.0%
GACGATGGATCTGCTTCCTA+TGG - tig0010571:25183-25202 Msa1348830:CDS 50.0%
CTGAAGAGAAGAAGTGAGCC+TGG + tig0010571:25423-25442 None:intergenic 50.0%
ATCATAGATGCGTGTGGTGC+AGG + tig0010571:25479-25498 None:intergenic 50.0%
ACTTCCCCTTCTTCTCTAGC+AGG + tig0010571:25593-25612 None:intergenic 50.0%
GCTAGAGAAGAAGGGGAAGT+AGG - tig0010571:25593-25612 Msa1348830:intron 50.0%
TAGACCCAGATACAAGGCGA+AGG - tig0010571:25627-25646 Msa1348830:intron 50.0%
GAAGCCTTCGCCTTGTATCT+GGG + tig0010571:25634-25653 None:intergenic 50.0%
AGAAGCCTTCGCCTTGTATC+TGG + tig0010571:25635-25654 None:intergenic 50.0%
GGGTGTCTAATGGGAAATGG+AGG + tig0010571:25704-25723 None:intergenic 50.0%
GGGATGGTTTCCTGTAGAAG+AGG - tig0010571:25763-25782 Msa1348830:intron 50.0%
! CATCACGTATGGAGAAGCAC+CGG - tig0010571:25846-25865 Msa1348830:intron 50.0%
TGAGAAGCAAATGCTTGGGG+AGG + tig0010571:26172-26191 None:intergenic 50.0%
GTGATGACATCCCCTTTGGT+AGG - tig0010571:26617-26636 Msa1348830:CDS 50.0%
GTAGGTCATCTTCTAGCCAC+AGG - tig0010571:26635-26654 Msa1348830:CDS 50.0%
TTGCTTCTGATGTGAGCAGG+TGG - tig0010571:26859-26878 Msa1348830:CDS 50.0%
GTCACCATTATTTGCAGGCG+TGG - tig0010571:27362-27381 Msa1348830:intron 50.0%
CAGTATTAACCCAATGGGGC+TGG + tig0010571:27844-27863 None:intergenic 50.0%
GATGGAAGGACAATACCCTC+CGG + tig0010571:27891-27910 None:intergenic 50.0%
GGACCTTGTCAGAGATCCAA+AGG - tig0010571:27927-27946 Msa1348830:intron 50.0%
CAATAAACAAGGGGGCAGCA+AGG + tig0010571:28169-28188 None:intergenic 50.0%
AGCCTTCCAAGCTTGAAGCA+AGG + tig0010571:28238-28257 None:intergenic 50.0%
TGGGTATGCCTTTAGCTAGG+AGG - tig0010571:28361-28380 Msa1348830:intron 50.0%
!! GATGAGCCTGGTTCTGCATA+TGG - tig0010571:28640-28659 Msa1348830:CDS 50.0%
TAATCACCCCCTGCCTAAAG+AGG - tig0010571:28726-28745 Msa1348830:intron 50.0%
CAGCTGCATCAGATCCATCA+AGG - tig0010571:28764-28783 Msa1348830:intron 50.0%
AGTCTCTGCCCTCAAGGAAT+TGG - tig0010571:28828-28847 Msa1348830:intron 50.0%
GAAGTTGAAGCCGTGAGTGT+TGG - tig0010571:29336-29355 Msa1348830:CDS 50.0%
GAAATCTGGGCTTAGGCATG+GGG - tig0010571:29382-29401 Msa1348830:CDS 50.0%
AATGGTGTACTTGTGGCCCA+TGG - tig0010571:29418-29437 Msa1348830:CDS 50.0%
GGTGCTTATGAAGGATGACC+TGG - tig0010571:29439-29458 Msa1348830:CDS 50.0%
GAGATAGATGGCCAGGTCTA+TGG - tig0010571:29590-29609 Msa1348830:intron 50.0%
GATGGCCAGGTCTATGGTAA+AGG - tig0010571:29596-29615 Msa1348830:intron 50.0%
CAGGTCTATGGTAAAGGGAC+CGG - tig0010571:29602-29621 Msa1348830:intron 50.0%
AGCCTCGTCCCATGTTAATC+CGG + tig0010571:29624-29643 None:intergenic 50.0%
ATGGGACGAGGCTAAAATGC+AGG - tig0010571:29631-29650 Msa1348830:intron 50.0%
ATGGCCACAGCATTCAGAGA+CGG - tig0010571:29809-29828 Msa1348830:intron 50.0%
! CCGGCACATTTGGAGAGTAT+AGG + tig0010571:29925-29944 None:intergenic 50.0%
CCTCACCTCTATTTCAGTGG+AGG + tig0010571:30485-30504 None:intergenic 50.0%
CCTCCACTGAAATAGAGGTG+AGG - tig0010571:30482-30501 Msa1348830:CDS 50.0%
GTGTGGATATGCTTCGAGAC+CGG - tig0010571:30577-30596 Msa1348830:five_prime_UTR 50.0%
TCGCTAACATAACCCGGTAG+TGG - tig0010571:30776-30795 Msa1348830:five_prime_UTR 50.0%
! GAGTCTTTAGAGGGGACTCA+AGG + tig0010571:30810-30829 None:intergenic 50.0%
ATCGGTGGTGTATCAAGGGG+AGG - tig0010571:21583-21602 Msa1348830:three_prime_UTR 55.0%
GGAGTCTCGGTGGCATTGTT+AGG + tig0010571:22086-22105 None:intergenic 55.0%
GGCATAACAGCTGTCTGCAG+GGG + tig0010571:22593-22612 None:intergenic 55.0%
CGGCATAACAGCTGTCTGCA+GGG + tig0010571:22594-22613 None:intergenic 55.0%
TCGGCATAACAGCTGTCTGC+AGG + tig0010571:22595-22614 None:intergenic 55.0%
GGAGATCAAGCGCTACCAAG+AGG - tig0010571:22874-22893 Msa1348830:intron 55.0%
CCGTATCAGCGGTCGAACTA+TGG + tig0010571:23008-23027 None:intergenic 55.0%
GCTGGATCATGCCTAGGATC+AGG - tig0010571:23199-23218 Msa1348830:intron 55.0%
CTCCGAAGATCTTCCCATGC+AGG + tig0010571:23487-23506 None:intergenic 55.0%
CGGAGCTACCTGATTGCAAG+AGG - tig0010571:23502-23521 Msa1348830:intron 55.0%
!! AAGAGGGCGCAAGCGTTTTG+AGG - tig0010571:23519-23538 Msa1348830:intron 55.0%
ATGTAGCAGACCCCACTTGG+TGG - tig0010571:24764-24783 Msa1348830:intron 55.0%
TGTAGCAGACCCCACTTGGT+GGG - tig0010571:24765-24784 Msa1348830:intron 55.0%
! AGACCCCACTTGGTGGGATA+AGG - tig0010571:24771-24790 Msa1348830:intron 55.0%
TAATTGCTCACGTCAGGGGC+AGG + tig0010571:24992-25011 None:intergenic 55.0%
TGATGGCATGGCAGATGCTG+AGG - tig0010571:25227-25246 Msa1348830:intron 55.0%
ATAGATGCGTGTGGTGCAGG+TGG + tig0010571:25476-25495 None:intergenic 55.0%
GGTTGAAGGAACTGTGCGTG+AGG + tig0010571:25509-25528 None:intergenic 55.0%
GCACGAGCGGAAACTTGTAC+AGG + tig0010571:25731-25750 None:intergenic 55.0%
TACAGGAAACCATCCCCCAC+GGG + tig0010571:25759-25778 None:intergenic 55.0%
CTACAGGAAACCATCCCCCA+CGG + tig0010571:25760-25779 None:intergenic 55.0%
CGGTGCTTCTCCATACGTGA+TGG + tig0010571:25848-25867 None:intergenic 55.0%
GAGCCACCAGAGATTGCCAA+AGG - tig0010571:25934-25953 Msa1348830:intron 55.0%
CCTCCTTTGGCAATCTCTGG+TGG + tig0010571:25940-25959 None:intergenic 55.0%
CCACCAGAGATTGCCAAAGG+AGG - tig0010571:25937-25956 Msa1348830:intron 55.0%
GCAGGTGATGACATCCCCTT+TGG - tig0010571:26613-26632 Msa1348830:CDS 55.0%
CAGAGAGCTGCAGTTCTCCA+TGG - tig0010571:26907-26926 Msa1348830:CDS 55.0%
AGAGCTGCAGTTCTCCATGG+AGG - tig0010571:26910-26929 Msa1348830:CDS 55.0%
AGCGCGATATAAGGCTGCTG+AGG - tig0010571:27432-27451 Msa1348830:intron 55.0%
!! CCAATGGGGCTGGTCTAACA+GGG + tig0010571:27834-27853 None:intergenic 55.0%
CCTGTTAGACCAGCCCCATT+GGG - tig0010571:27832-27851 Msa1348830:CDS 55.0%
TCACGTGCTAAGGATGAGCC+TGG - tig0010571:28628-28647 Msa1348830:CDS 55.0%
ACTGCCTCCTCTTTAGGCAG+GGG + tig0010571:28736-28755 None:intergenic 55.0%
GACTGCCTCCTCTTTAGGCA+GGG + tig0010571:28737-28756 None:intergenic 55.0%
AGACTGCCTCCTCTTTAGGC+AGG + tig0010571:28738-28757 None:intergenic 55.0%
! CAGTGCATGATGGAGGGTCT+TGG - tig0010571:28959-28978 Msa1348830:intron 55.0%
! GTTCGGACCACTGAGGCATT+TGG + tig0010571:29063-29082 None:intergenic 55.0%
GTTCAGAGTTCGGACCACTG+AGG + tig0010571:29070-29089 None:intergenic 55.0%
!! TTGAAGCCGTGAGTGTTGGG+TGG - tig0010571:29340-29359 Msa1348830:CDS 55.0%
GTGGCCCATGGTGCTTATGA+AGG - tig0010571:29430-29449 Msa1348830:CDS 55.0%
CGGTCCCTTTACCATAGACC+TGG + tig0010571:29604-29623 None:intergenic 55.0%
GACCGGATTAACATGGGACG+AGG - tig0010571:29619-29638 Msa1348830:intron 55.0%
CGTTCTTCAGGCTGCTGAGA+AGG - tig0010571:29762-29781 Msa1348830:intron 55.0%
TCTGCCGTCTCTGAATGCTG+TGG + tig0010571:29816-29835 None:intergenic 55.0%
! TGTAGGGGCTGGCAAACCAT+TGG + tig0010571:30025-30044 None:intergenic 55.0%
CCAATTCTGTCTGTAGGGGC+TGG + tig0010571:30036-30055 None:intergenic 55.0%
CCAGCCCCTACAGACAGAAT+TGG - tig0010571:30033-30052 Msa1348830:intron 55.0%
CTGCAGCGATTCGCATCTTC+TGG - tig0010571:30228-30247 Msa1348830:intron 55.0%
! GGGATTGCTGGAGCATTCCT+AGG + tig0010571:30261-30280 None:intergenic 55.0%
! ATGTGAAGGGTGGTGGCTGT+TGG - tig0010571:30366-30385 Msa1348830:CDS 55.0%
! TGTGAAGGGTGGTGGCTGTT+GGG - tig0010571:30367-30386 Msa1348830:CDS 55.0%
AGGGGAGGTGATGTTGGGTG+AGG - tig0010571:21598-21617 Msa1348830:three_prime_UTR 60.0%
GCTTGCGCCCTCTTGCAATC+AGG + tig0010571:23513-23532 None:intergenic 60.0%
!! GCAGGTGGTGGAACTGAACC+AGG + tig0010571:25461-25480 None:intergenic 60.0%
GCAATCTCTGGTGGCTCTCG+TGG + tig0010571:25931-25950 None:intergenic 60.0%
GGAGAACTGCAGCTCTCTGC+TGG + tig0010571:26906-26925 None:intergenic 60.0%
GCTCATAGCGCACCCAATCC+TGG + tig0010571:27175-27194 None:intergenic 60.0%
CCCTGTTAGACCAGCCCCAT+TGG - tig0010571:27831-27850 Msa1348830:CDS 60.0%
!! CCCAATGGGGCTGGTCTAAC+AGG + tig0010571:27835-27854 None:intergenic 60.0%
TCACCCCCTGCCTAAAGAGG+AGG - tig0010571:28729-28748 Msa1348830:intron 60.0%
CTGCCTCCTCTTTAGGCAGG+GGG + tig0010571:28735-28754 None:intergenic 60.0%
GGGTTCAGTCTCTGCCCTCA+AGG - tig0010571:28822-28841 Msa1348830:intron 60.0%
!! CAGGCTGCTGAGAAGGCACT+TGG - tig0010571:29769-29788 Msa1348830:intron 60.0%
AGAGACGGCAGAGTTCTCCC+AGG - tig0010571:29824-29843 Msa1348830:intron 60.0%
GCGAATCGCTGCAGAGTTCG+TGG + tig0010571:30222-30241 None:intergenic 60.0%
! AAGGGTGGTGGCTGTTGGGT+TGG - tig0010571:30371-30390 Msa1348830:CDS 60.0%
! AGGGTGGTGGCTGTTGGGTT+GGG - tig0010571:30372-30391 Msa1348830:CDS 60.0%
GCAGGAACGACGTGTACCCG+AGG + tig0010571:24346-24365 None:intergenic 65.0%
TTGCTCACGTCAGGGGCAGG+AGG + tig0010571:24989-25008 None:intergenic 65.0%
GATGCGTGTGGTGCAGGTGG+TGG + tig0010571:25473-25492 None:intergenic 65.0%
GGAAACCATCCCCCACGGGA+TGG + tig0010571:25755-25774 None:intergenic 65.0%
TCCGCTCGTGCACCATCCCG+TGG - tig0010571:25740-25759 Msa1348830:intron 70.0%
CCCACGGGATGGTGCACGAG+CGG + tig0010571:25744-25763 None:intergenic 70.0%
CCGCTCGTGCACCATCCCGT+GGG - tig0010571:25741-25760 Msa1348830:intron 70.0%
CGCTCGTGCACCATCCCGTG+GGG - tig0010571:25742-25761 Msa1348830:intron 70.0%
GCTCGTGCACCATCCCGTGG+GGG - tig0010571:25743-25762 Msa1348830:intron 70.0%
GTGCACCATCCCGTGGGGGA+TGG - tig0010571:25747-25766 Msa1348830:intron 70.0%
Chromosome Type Strat End Strand Name
tig0010571 gene 21134 30980 21134 ID=Msa1348830;Name=Msa1348830
tig0010571 mRNA 21134 30980 21134 ID=Msa1348830-mRNA-1;Parent=Msa1348830;Name=Msa1348830-mRNA-1;_AED=0.28;_eAED=0.28;_QI=441|1|1|1|1|1|17|696|957
tig0010571 exon 21134 21938 21134 ID=Msa1348830-mRNA-1:exon:6639;Parent=Msa1348830-mRNA-1
tig0010571 exon 22269 22342 22269 ID=Msa1348830-mRNA-1:exon:6638;Parent=Msa1348830-mRNA-1
tig0010571 exon 22462 22527 22462 ID=Msa1348830-mRNA-1:exon:6637;Parent=Msa1348830-mRNA-1
tig0010571 exon 23063 23152 23063 ID=Msa1348830-mRNA-1:exon:6636;Parent=Msa1348830-mRNA-1
tig0010571 exon 23265 23497 23265 ID=Msa1348830-mRNA-1:exon:6635;Parent=Msa1348830-mRNA-1
tig0010571 exon 24639 24735 24639 ID=Msa1348830-mRNA-1:exon:6634;Parent=Msa1348830-mRNA-1
tig0010571 exon 25183 25236 25183 ID=Msa1348830-mRNA-1:exon:6633;Parent=Msa1348830-mRNA-1
tig0010571 exon 25367 25497 25367 ID=Msa1348830-mRNA-1:exon:6632;Parent=Msa1348830-mRNA-1
tig0010571 exon 25995 26058 25995 ID=Msa1348830-mRNA-1:exon:6631;Parent=Msa1348830-mRNA-1
tig0010571 exon 26156 26746 26156 ID=Msa1348830-mRNA-1:exon:6630;Parent=Msa1348830-mRNA-1
tig0010571 exon 26848 26931 26848 ID=Msa1348830-mRNA-1:exon:6629;Parent=Msa1348830-mRNA-1
tig0010571 exon 27090 27195 27090 ID=Msa1348830-mRNA-1:exon:6628;Parent=Msa1348830-mRNA-1
tig0010571 exon 27529 27599 27529 ID=Msa1348830-mRNA-1:exon:6627;Parent=Msa1348830-mRNA-1
tig0010571 exon 27718 27875 27718 ID=Msa1348830-mRNA-1:exon:6626;Parent=Msa1348830-mRNA-1
tig0010571 exon 28453 28663 28453 ID=Msa1348830-mRNA-1:exon:6625;Parent=Msa1348830-mRNA-1
tig0010571 exon 29045 29515 29045 ID=Msa1348830-mRNA-1:exon:6624;Parent=Msa1348830-mRNA-1
tig0010571 exon 30276 30980 30276 ID=Msa1348830-mRNA-1:exon:6623;Parent=Msa1348830-mRNA-1
tig0010571 five_prime_UTR 30540 30980 30540 ID=Msa1348830-mRNA-1:five_prime_utr;Parent=Msa1348830-mRNA-1
tig0010571 CDS 30276 30539 30276 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 29045 29515 29045 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 28453 28663 28453 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 27718 27875 27718 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 27529 27599 27529 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 27090 27195 27090 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 26848 26931 26848 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 26156 26746 26156 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 25995 26058 25995 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 25367 25497 25367 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 25183 25236 25183 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 24639 24735 24639 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 23265 23497 23265 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 23063 23152 23063 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 22462 22527 22462 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 22269 22342 22269 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 CDS 21830 21938 21830 ID=Msa1348830-mRNA-1:cds;Parent=Msa1348830-mRNA-1
tig0010571 three_prime_UTR 21134 21829 21134 ID=Msa1348830-mRNA-1:three_prime_utr;Parent=Msa1348830-mRNA-1
Gene Sequence

>Msa1348830

ATGTATAAATCGGTGGTGTATCAAGGGGAGGTGATGTTGGGTGAGGTAGATATATACCCAGAAGTGAACAACAACATCAACAACAAGAACAAGAATTTTGATGTGAAGGAAATCAGAATAACTCACTTTTCTCAACCCAGTGAGAGGTGTTCACCACTTGCTGTTCTTCATACTATTACTACTGTTTGCTTCAAAATGGAGTCAAAGACACAGCACCAGAATCAGCTCTTACACTTGCACTCCTTGTGTATCAGAGAGAACAAGACAGCTGTTATGCCGATGTATGGGGAAGAATTACATTTGGTTGCAATGCATTCACGGAATGACGACAGACCATGTTTCTGGGGATTTATTGTTGCCACAGGACTTTATAATTCGTCTGTTGTGTTGTTAAATCTCAGATGTTTGGGTATAGTGTTTGATCTGGATGAAACCCTTGTCGTAGCAAATACAATGCGCTCATTCGAGGATAGAATTGATGCACTCCAGAGAAAAGTAAACTCTGAAGTAGATCCACAACGAATTTCTGGCATGCAGGCGGAGATCAAGCGCTACCAAGAGGACAAGAGTATATTGAAGCAGTATGCTGAAAATGATCAGGTAGTTGATAACGGAAAAGTGATAAAAGTTCAATCCGAGCTTGTTCCAGCATTATCTGACAGTCATCAGCCCATAGTTCGACCGCTGATACGGTTACATGAAAAAAACATTATTTTGACACGCATCAATCCGCAGATTCGTGATACAAGTGTTCTTGTGAGGTTGAGACCTGCATGGGAAGATCTTCGGAGCTACCTGATTGCAAGAGGGCGCAAGCGTTTTGAGGTTTTTGTTTGCACAATGGCTGAAAGGGACTATGCACTAGAAATGTGGAGACTTCTTGATCCAGATTCAAATTTGATAAATTCAAAAGAACTATTAGGTCGCATTGTATGCGTTAAGTCCGGTTTGAAAAAGTCTTTGTTCAATGTCTTCCAAGATGGCTCATGCCATCCAAAGATGGCGTTAGTAATTGACGATCGCTTGAAAGTGTGGGATGAGAAAGATCAACCTCGGGTACACGTCGTTCCTGCATTTGCTCCATACTATGCTCCTCAAGCTGAGGCAAGCAATACTATCCCTGTCTTATGCGTTGCAAGAAATGTTGCTTGCAATGTTAGGGGTGGCTTCTTTAAGGATTTTGATGATGGTCTTCTACAAAAGATTCCTCAAATTGCCTATGAAGATGATATTAAAGATATACCTCCTGCCCCTGACGTGAGCAATTATCTAGTTTCAGAGGACGATGGATCTGCTTCCTATGGAAATAGAGATCCGTTTTTGTTTGATGGCATGGCAGATGCTGAGGTAGAAAGAAAATTGAAGGATGCAATAACAGCAACTTCAGCTATTCCTATGACAACTGCTAAGTTAGATCCCAGGCTCACTTCTTCTCTTCAGTATACAATGGTATCTCCTGGTTCAGTTCCACCACCTGCACCACACGCATCTATGATACAATTGCCTCACGCACAGTTCCTTCAACCTGCTACACCAGTAAAACCAATGGTTCAAGTTGCCCCTTTAGAATCAAGCTTGCATAGTTCTCCTGCTAGAGAAGAAGGGGAAGTAGGTGAATCAGAATTAGACCCAGATACAAGGCGAAGGCTTCTCATATTGCAACATGGACAAGATGTTAGGGATCATACATCTAGTGAGCCTCCATTTCCCATTAGACACCCCAATCCTGTACAAGTTTCCGCTCGTGCACCATCCCGTGGGGGATGGTTTCCTGTAGAAGAGGAGATTGGTTCACAACCACCAAACAGGGTACTACCTAAAGAAATGCTTGTAGATTCTGGTCCATCACGTATGGAGAAGCACCGGCCTCATCAACCATCCTTTTTCTCTAAGGTTGATGGCTCTATTTCATCTGATAGAGCTCTCCACGAGAGCCACCAGAGATTGCCAAAGGAGATTTACCATAGAGATGATCGCTCAAGAGTGAACCATATGCTCCCTAGTTATCATTCGTTATCTGGTGATGACATCCCCTTTGGTAGGTCATCTTCTAGCCACAGGGATCTTGACTCTGAATCTGGTAATTCTGTATTGCATGCAGAAACACCAGTTGCAGTATTACAGGAAATTGCACTGAAGTGTGGAACTAAGGTGGAATATACATCATCTTTGGCTGCCAGCAGAGAGCTGCAGTTCTCCATGGAGGCGTGGTTTTCTGGGAAAAAAGTTGGCCAGGGATTTGGCAGAACTAGAATGGAAGCGCGATATAAGGCTGCTGAGGATTCTATTAAACATTTGGCAGACATATATTTATCACGTGCTAAGGATGAGCCTGGTTCTGCATATGGTGATGTGAGTGGATTTCCTAATGCAAATGACAACGGTTATGTGGGTAATGTTAGTTCTCTTGGTAATCACCCCCTGCCTAAAGAGGAGGCAGTCTCATTTTCAGCTGCATCAGATCCATCAAGGGTTTTAGATCCTAGGTTGGAAGTTAAGAGATCAACGGGTTCAGTCTCTGCCCTCAAGGAATTGTGCATGATGGAGGGTCTTGGTGTCAATTTTCTATCGGTGCCTGCTCCAATGTTAACAAATTCAGTTCAGAAAGATGAAGTATACGCACAGGTTGAGATAGATGGCCAGGTCTATGGTAAAGGGACCGGATTAACATGGGACGAGGCTAAAATGCAGGCTGCTGAGAAGGCACTTGGAAGTCTAAGAACAATGCATGGCCACAGCATTCAGAGACGGCAGAGTTCTCCCAGGCCATTTCAGGGATTCTCGAATAAACGTTTGAAGCAAGAACATCCACGAACTCTGCAGCGATTCGCATCTTCTGGTAGATATCCTAGGAATGCTCCAGCAATCCCTTGA
Protein sequence

>Msa1348830

MYKSVVYQGEVMLGEVDIYPEVNNNINNKNKNFDVKEIRITHFSQPSERCSPLAVLHTITTVCFKMESKTQHQNQLLHLHSLCIRENKTAVMPMYGEELHLVAMHSRNDDRPCFWGFIVATGLYNSSVVLLNLRCLGIVFDLDETLVVANTMRSFEDRIDALQRKVNSEVDPQRISGMQAEIKRYQEDKSILKQYAENDQVVDNGKVIKVQSELVPALSDSHQPIVRPLIRLHEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVFVCTMAERDYALEMWRLLDPDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPPAPDVSNYLVSEDDGSASYGNRDPFLFDGMADAEVERKLKDAITATSAIPMTTAKLDPRLTSSLQYTMVSPGSVPPPAPHASMIQLPHAQFLQPATPVKPMVQVAPLESSLHSSPAREEGEVGESELDPDTRRRLLILQHGQDVRDHTSSEPPFPIRHPNPVQVSARAPSRGGWFPVEEEIGSQPPNRVLPKEMLVDSGPSRMEKHRPHQPSFFSKVDGSISSDRALHESHQRLPKEIYHRDDRSRVNHMLPSYHSLSGDDIPFGRSSSSHRDLDSESGNSVLHAETPVAVLQEIALKCGTKVEYTSSLAASRELQFSMEAWFSGKKVGQGFGRTRMEARYKAAEDSIKHLADIYLSRAKDEPGSAYGDVSGFPNANDNGYVGNVSSLGNHPLPKEEAVSFSAASDPSRVLDPRLEVKRSTGSVSALKELCMMEGLGVNFLSVPAPMLTNSVQKDEVYAQVEIDGQVYGKGTGLTWDEAKMQAAEKALGSLRTMHGHSIQRRQSSPRPFQGFSNKRLKQEHPRTLQRFASSGRYPRNAPAIP*