Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1357950 | XP_024640338.1 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2078 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1357950 | sp|Q9M2R0|FTIP3_ARATH | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1357950 | G7KC44 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2078 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1357950 | Msa1358170 | 0.858076 | 1.055546e-62 | -8.615850e-47 |
Msa1357950 | Msa1411480 | 0.994701 | 1.847052e-209 | -8.615850e-47 |
Msa0689180 | Msa1357950 | 0.858472 | 8.046246e-63 | -8.615850e-47 |
Msa0753230 | Msa1357950 | 0.973903 | 3.180423e-137 | -8.615850e-47 |
Msa0795490 | Msa1357950 | 0.950831 | 7.287874e-109 | -8.615850e-47 |
Msa0147680 | Msa1357950 | 0.818529 | 1.869656e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1357950 | MtrunA17_Chr5g0397601 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2078 |
Msa1357950 | MtrunA17_Chr8g0349231 | 63.878 | 1016 | 345 | 11 | 1 | 1007 | 1 | 1003 | 0.0 | 1344 |
Msa1357950 | MtrunA17_Chr7g0258331 | 69.191 | 779 | 227 | 6 | 233 | 1007 | 6 | 775 | 0.0 | 1156 |
Msa1357950 | MtrunA17_Chr1g0174761 | 68.726 | 777 | 233 | 4 | 233 | 1007 | 6 | 774 | 0.0 | 1138 |
Msa1357950 | MtrunA17_Chr4g0033151 | 67.788 | 773 | 238 | 4 | 235 | 1007 | 9 | 770 | 0.0 | 1123 |
Msa1357950 | MtrunA17_Chr1g0174581 | 62.389 | 787 | 279 | 6 | 235 | 1007 | 14 | 797 | 0.0 | 1065 |
Msa1357950 | MtrunA17_Chr4g0010751 | 64.465 | 757 | 257 | 6 | 259 | 1007 | 442 | 1194 | 0.0 | 1055 |
Msa1357950 | MtrunA17_Chr4g0010751 | 32.673 | 202 | 135 | 1 | 4 | 204 | 1 | 202 | 2.85e-25 | 113 |
Msa1357950 | MtrunA17_Chr3g0087501 | 62.326 | 791 | 277 | 9 | 235 | 1007 | 35 | 822 | 0.0 | 1051 |
Msa1357950 | MtrunA17_Chr4g0014711 | 62.404 | 782 | 278 | 9 | 232 | 1007 | 273 | 1044 | 0.0 | 1026 |
Msa1357950 | MtrunA17_Chr4g0014711 | 37.121 | 132 | 74 | 3 | 5 | 133 | 3 | 128 | 3.17e-16 | 84.0 |
Msa1357950 | MtrunA17_Chr7g0247271 | 64.358 | 693 | 229 | 6 | 326 | 1007 | 281 | 966 | 0.0 | 935 |
Msa1357950 | MtrunA17_Chr7g0247271 | 31.481 | 594 | 324 | 20 | 1 | 527 | 78 | 655 | 2.24e-59 | 220 |
Msa1357950 | MtrunA17_Chr4g0060191 | 51.643 | 761 | 325 | 12 | 265 | 1007 | 303 | 1038 | 0.0 | 788 |
Msa1357950 | MtrunA17_Chr4g0060191 | 48.485 | 132 | 64 | 1 | 5 | 132 | 18 | 149 | 1.19e-29 | 127 |
Msa1357950 | MtrunA17_Chr4g0028371 | 50.444 | 789 | 360 | 10 | 232 | 1007 | 13 | 783 | 0.0 | 787 |
Msa1357950 | MtrunA17_Chr6g0461151 | 50.262 | 764 | 340 | 13 | 263 | 1007 | 284 | 1026 | 0.0 | 774 |
Msa1357950 | MtrunA17_Chr6g0461151 | 39.535 | 129 | 76 | 1 | 5 | 131 | 6 | 134 | 2.74e-22 | 103 |
Msa1357950 | MtrunA17_Chr6g0460791 | 49.017 | 763 | 342 | 13 | 265 | 1007 | 274 | 1009 | 0.0 | 751 |
Msa1357950 | MtrunA17_Chr6g0460791 | 44.186 | 129 | 71 | 1 | 5 | 132 | 11 | 139 | 1.57e-28 | 124 |
Msa1357950 | MtrunA17_Chr4g0035961 | 48.092 | 786 | 326 | 11 | 235 | 1007 | 16 | 732 | 0.0 | 750 |
Msa1357950 | MtrunA17_Chr1g0151051 | 41.935 | 806 | 431 | 14 | 221 | 1007 | 11 | 798 | 0.0 | 624 |
Msa1357950 | MtrunA17_Chr5g0447321 | 38.462 | 793 | 442 | 15 | 230 | 1007 | 2 | 763 | 0.0 | 551 |
Msa1357950 | MtrunA17_Chr4g0010641 | 60.769 | 130 | 49 | 1 | 877 | 1006 | 1 | 128 | 8.50e-49 | 169 |
Msa1357950 | MtrunA17_Chr6g0461171 | 40.310 | 129 | 75 | 1 | 5 | 131 | 6 | 134 | 8.21e-26 | 106 |
Msa1357950 | MtrunA17_Chr4g0010701 | 44.231 | 104 | 36 | 2 | 880 | 983 | 16 | 97 | 2.66e-20 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1357950 | AT4G11610.2 | 75.538 | 1022 | 218 | 8 | 1 | 1007 | 3 | 1007 | 0.0 | 1623 |
Msa1357950 | AT4G11610.1 | 75.342 | 1022 | 224 | 8 | 1 | 1007 | 3 | 1011 | 0.0 | 1621 |
Msa1357950 | AT4G11610.3 | 77.093 | 860 | 179 | 6 | 163 | 1007 | 18 | 874 | 0.0 | 1404 |
Msa1357950 | AT4G00700.1 | 56.500 | 1023 | 412 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1186 |
Msa1357950 | AT4G00700.2 | 56.500 | 1023 | 412 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1186 |
Msa1357950 | AT3G57880.4 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa1357950 | AT3G57880.2 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa1357950 | AT3G57880.3 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa1357950 | AT3G57880.1 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa1357950 | AT5G12970.1 | 69.716 | 776 | 223 | 4 | 232 | 1007 | 6 | 769 | 0.0 | 1151 |
Msa1357950 | AT1G51570.1 | 68.935 | 779 | 230 | 5 | 233 | 1007 | 6 | 776 | 0.0 | 1149 |
Msa1357950 | AT1G22610.1 | 55.029 | 1034 | 427 | 14 | 5 | 1007 | 3 | 1029 | 0.0 | 1138 |
Msa1357950 | AT5G48060.1 | 53.104 | 1047 | 431 | 14 | 5 | 1007 | 6 | 1036 | 0.0 | 1105 |
Msa1357950 | AT3G61300.1 | 53.682 | 1032 | 392 | 22 | 1 | 1007 | 2 | 972 | 0.0 | 1101 |
Msa1357950 | AT5G06850.1 | 62.468 | 786 | 279 | 6 | 235 | 1007 | 12 | 794 | 0.0 | 1080 |
Msa1357950 | AT1G04150.1 | 51.694 | 1033 | 441 | 18 | 3 | 1007 | 10 | 1012 | 0.0 | 1033 |
Msa1357950 | AT1G74720.1 | 43.538 | 1091 | 507 | 21 | 2 | 1007 | 15 | 1081 | 0.0 | 882 |
Msa1357950 | AT4G20080.1 | 54.685 | 779 | 327 | 10 | 236 | 1007 | 15 | 774 | 0.0 | 870 |
Msa1357950 | AT5G17980.1 | 49.472 | 758 | 348 | 12 | 263 | 1007 | 314 | 1049 | 0.0 | 774 |
Msa1357950 | AT5G17980.1 | 39.716 | 141 | 79 | 3 | 5 | 139 | 6 | 146 | 1.29e-22 | 105 |
Msa1357950 | AT3G03680.1 | 49.613 | 776 | 326 | 20 | 265 | 1007 | 274 | 1017 | 0.0 | 762 |
Msa1357950 | AT3G03680.1 | 40.625 | 128 | 76 | 0 | 5 | 132 | 8 | 135 | 7.66e-26 | 115 |
Msa1357950 | AT3G61720.1 | 38.300 | 812 | 439 | 22 | 235 | 1007 | 7 | 795 | 6.38e-160 | 491 |
Msa1357950 | AT5G03435.1 | 40.385 | 780 | 404 | 25 | 235 | 1000 | 7 | 739 | 1.39e-156 | 481 |
Msa1357950 | AT5G03435.2 | 42.586 | 580 | 296 | 16 | 235 | 807 | 7 | 556 | 3.10e-129 | 403 |
Msa1357950 | AT5G44760.1 | 47.044 | 406 | 164 | 10 | 235 | 635 | 5 | 364 | 1.86e-108 | 345 |
Msa1357950 | AT1G03370.2 | 36.885 | 122 | 73 | 2 | 274 | 393 | 3 | 122 | 1.61e-14 | 79.0 |
Msa1357950 | AT1G03370.1 | 36.885 | 122 | 73 | 2 | 274 | 393 | 3 | 122 | 2.03e-14 | 78.6 |
Find 232 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAACAAAGACTTGAAAAT+TGG | 0.180427 | tig0016220:-71855 | Msa1357950:CDS |
CCCAACTGGTGTTAAGAAAA+TGG | 0.211222 | tig0016220:-71757 | Msa1357950:CDS |
AGAAGAGCCTTCTCCATCTT+TGG | 0.233433 | tig0016220:+73837 | None:intergenic |
TCAGCACTTGGTTTCCTATC+TGG | 0.237936 | tig0016220:+72501 | None:intergenic |
CTATCTGGTGGAACTCTTAA+AGG | 0.240838 | tig0016220:+72809 | None:intergenic |
ATTATGATCAACTTAAAGTT+AGG | 0.248856 | tig0016220:-73892 | Msa1357950:CDS |
GGCTCGTGAGCTTCCTTCTA+TGG | 0.253047 | tig0016220:-73050 | Msa1357950:CDS |
CGGAAGCCTGTTTCGAAATC+TGG | 0.258205 | tig0016220:+70780 | None:intergenic |
ACTAACTCAAGTTCATTTCT+TGG | 0.266395 | tig0016220:-73649 | Msa1357950:CDS |
GTGTATTGCTCGTTGTATTT+TGG | 0.268384 | tig0016220:+71954 | None:intergenic |
TAATGGTTGTTCGAAACTTT+TGG | 0.275614 | tig0016220:+73785 | None:intergenic |
TCTCATGTTGGTTTGCTTCC+CGG | 0.299961 | tig0016220:-71367 | Msa1357950:CDS |
TTTCTGTTTGTTAGCTGCTT+TGG | 0.314831 | tig0016220:-70866 | Msa1357950:CDS |
TGCCGTTGATGGTTTGTGTT+AGG | 0.316788 | tig0016220:+73346 | None:intergenic |
CTCGGTGGAGGAAGGGTTGT+TGG | 0.318759 | tig0016220:-73157 | Msa1357950:CDS |
TGAACTTGAGTTAGTAGCTT+TGG | 0.320839 | tig0016220:+73657 | None:intergenic |
GTGTGTTTGCAGTTGGAAAA+TGG | 0.332879 | tig0016220:-71449 | Msa1357950:CDS |
ATCGTCAAGGCGATACCATT+CGG | 0.343035 | tig0016220:+72775 | None:intergenic |
TTTCTCTACCTATTCTTGAT+AGG | 0.343636 | tig0016220:-71324 | Msa1357950:CDS |
CTGATTCTTATCATAGTGTT+TGG | 0.343905 | tig0016220:+72967 | None:intergenic |
AAGAAAGGGGAGAAAGTTAA+AGG | 0.345361 | tig0016220:-72752 | Msa1357950:CDS |
AAAAGGATCTTAATCCTGTT+TGG | 0.345946 | tig0016220:-73759 | Msa1357950:CDS |
TGATAGGTGTATGGAACTTC+AGG | 0.347349 | tig0016220:-71308 | Msa1357950:intron |
GTTGATGCTGATGCCGTTGA+TGG | 0.350294 | tig0016220:+73335 | None:intergenic |
TGAAGATCATGTAATACTTT+CGG | 0.351594 | tig0016220:-72402 | Msa1357950:CDS |
TGAACAAGGACTGTTGTAAT+AGG | 0.354570 | tig0016220:+71399 | None:intergenic |
CTTCCTTCTATGGATCTTAC+CGG | 0.373034 | tig0016220:-73040 | Msa1357950:CDS |
CAGATGTTGACTCACATCTA+TGG | 0.373205 | tig0016220:-71524 | Msa1357950:CDS |
GGCATCCCAGATTTCGAAAC+AGG | 0.373780 | tig0016220:-70786 | Msa1357950:CDS |
TTGCTTGTTCTTCACCCAAC+TGG | 0.374868 | tig0016220:-71771 | Msa1357950:CDS |
TCGGGTGCCAAAGGACTATC+TGG | 0.383261 | tig0016220:+72794 | None:intergenic |
ACAAACGGTTGTAGGTGATT+TGG | 0.383411 | tig0016220:-70959 | Msa1357950:CDS |
GAAGAGCCTTCTCCATCTTT+GGG | 0.384950 | tig0016220:+73838 | None:intergenic |
TTCCCAAATCAGTGGTGAAA+AGG | 0.392570 | tig0016220:-71880 | Msa1357950:CDS |
CAAATGGTGGCTGGTTTAGC+AGG | 0.392665 | tig0016220:-70823 | Msa1357950:CDS |
CCATTTGTTGAGGTGAGAAT+TGG | 0.401775 | tig0016220:-73007 | Msa1357950:CDS |
ATAGAATCATTCATTCTAGA+TGG | 0.401919 | tig0016220:-72295 | Msa1357950:CDS |
TCGTCAAGGCGATACCATTC+GGG | 0.407136 | tig0016220:+72776 | None:intergenic |
TAGCAAAATACGGTCACAAA+TGG | 0.411100 | tig0016220:-72010 | Msa1357950:CDS |
TGTAGGTGATTTGGCTAGCC+AGG | 0.412061 | tig0016220:-70950 | Msa1357950:CDS |
CCAATTCTCACCTCAACAAA+TGG | 0.417160 | tig0016220:+73007 | None:intergenic |
TGATCAACATCCACGGCAAC+AGG | 0.420405 | tig0016220:+72257 | None:intergenic |
AAAGATCTTCATTCCATTGT+GGG | 0.420444 | tig0016220:+72447 | None:intergenic |
TACCGCATTCTTACAAGGTC+AGG | 0.427894 | tig0016220:+71012 | None:intergenic |
ATGGACTCAACAGAAGGATT+TGG | 0.428137 | tig0016220:+73472 | None:intergenic |
GTGAGTTGATGCTAGCTGTT+TGG | 0.429438 | tig0016220:-72730 | Msa1357950:CDS |
TTATGATCAACTTAAAGTTA+GGG | 0.431458 | tig0016220:-73891 | Msa1357950:CDS |
AATTCCTCATCCATTTCATC+GGG | 0.432095 | tig0016220:+71060 | None:intergenic |
AACATACTATCAGTTCTTGC+AGG | 0.433599 | tig0016220:+70727 | None:intergenic |
TCATGTGTTGTTTCTCATGT+TGG | 0.437544 | tig0016220:-71379 | Msa1357950:CDS |
TCAGAATCCGGAGTGGCATC+AGG | 0.438503 | tig0016220:-72948 | Msa1357950:CDS |
TCTTTAAGTGCAAAATCAAC+CGG | 0.439305 | tig0016220:+73193 | None:intergenic |
CCGGGAAAAGATGAGATCAT+TGG | 0.439731 | tig0016220:-72362 | Msa1357950:CDS |
AAAGAAACAAGTCCGTTTCT+CGG | 0.443107 | tig0016220:-73175 | Msa1357950:CDS |
TCGAACAACCATTAAAGAAA+AGG | 0.443124 | tig0016220:-73776 | Msa1357950:CDS |
CTCAGTTACATCACTACAAC+CGG | 0.443547 | tig0016220:-73212 | Msa1357950:CDS |
GGTTGAAGATCGAGTTGGTC+CGG | 0.444254 | tig0016220:-72381 | Msa1357950:CDS |
CGCATATCGACTCTTGAAAC+AGG | 0.446486 | tig0016220:-71819 | Msa1357950:CDS |
TTCATGTGTGGAGGGTATCT+TGG | 0.447757 | tig0016220:+71114 | None:intergenic |
ACAACAAAGACTTGAAAATT+GGG | 0.452516 | tig0016220:-71854 | Msa1357950:CDS |
ACCTATTCTTGATAGGTGTA+TGG | 0.457302 | tig0016220:-71317 | Msa1357950:CDS |
AATTCAGCTACGGCTATGTC+TGG | 0.461073 | tig0016220:-72207 | Msa1357950:CDS |
CCGAGTTCTAAAACACCAAT+TGG | 0.462500 | tig0016220:+72104 | None:intergenic |
GCCCCACTGCAAAACAGTTA+TGG | 0.464071 | tig0016220:-72133 | Msa1357950:CDS |
CCAACTGGTGTTAAGAAAAT+GGG | 0.464187 | tig0016220:-71756 | Msa1357950:CDS |
GTTGAAGATCGAGTTGGTCC+GGG | 0.464534 | tig0016220:-72380 | Msa1357950:CDS |
TAGAAGCTCTCATTCCAAAC+AGG | 0.467298 | tig0016220:+73745 | None:intergenic |
AAGAGTGAGATAGTGAAGAT+TGG | 0.467768 | tig0016220:+73702 | None:intergenic |
GGATTCATGCACTGTTGAGC+TGG | 0.468052 | tig0016220:-70921 | Msa1357950:CDS |
CTCGGAGTGCTGAATGCAAT+AGG | 0.474307 | tig0016220:-72086 | Msa1357950:CDS |
CGGGAAAAGATGAGATCATT+GGG | 0.475103 | tig0016220:-72361 | Msa1357950:CDS |
TCTATCATGCTCCGAGGTTG+TGG | 0.475877 | tig0016220:-72604 | Msa1357950:CDS |
ACCCTTCCTCCACCGAGAAA+CGG | 0.478302 | tig0016220:+73163 | None:intergenic |
CTTGGCAAAGTTAGCCTCAC+AGG | 0.478373 | tig0016220:-73631 | Msa1357950:CDS |
TCCCAAATCAGTGGTGAAAA+GGG | 0.479687 | tig0016220:-71879 | Msa1357950:CDS |
GCCGTTGATGGTTTGTGTTA+GGG | 0.479912 | tig0016220:+73347 | None:intergenic |
TGACATATGCATCCGGGAAA+CGG | 0.482033 | tig0016220:+72528 | None:intergenic |
TGCTGAAGTCCATGGACCTA+CGG | 0.483695 | tig0016220:-73434 | Msa1357950:CDS |
AGCATGATTATTTGTCGGCA+TGG | 0.485124 | tig0016220:+73453 | None:intergenic |
GCATATGTCAAGGTCCAGAT+AGG | 0.486634 | tig0016220:-72515 | Msa1357950:CDS |
AACAGAAGGATTTGGAATTG+AGG | 0.489461 | tig0016220:+73480 | None:intergenic |
CTCCACAGCGTTCAGCGGTA+TGG | 0.490783 | tig0016220:+72331 | None:intergenic |
GTCCGTTTCTCGGTGGAGGA+AGG | 0.491607 | tig0016220:-73165 | Msa1357950:CDS |
ACATATTGTGTAGCAAAATA+CGG | 0.491890 | tig0016220:-72020 | Msa1357950:CDS |
TGTAGTACACCCCGATGAAA+TGG | 0.494237 | tig0016220:-71070 | Msa1357950:CDS |
TGGACCTTGACATATGCATC+CGG | 0.494944 | tig0016220:+72521 | None:intergenic |
AGTTCCACCAGATAGTCCTT+TGG | 0.496430 | tig0016220:-72801 | Msa1357950:CDS |
GGTAGAATACAAACGGTTGT+AGG | 0.496800 | tig0016220:-70967 | Msa1357950:CDS |
GTGAGATAGTGAAGATTGGA+AGG | 0.498614 | tig0016220:+73706 | None:intergenic |
GATCGTTTGAGGAGCGTGGC+TGG | 0.499227 | tig0016220:-70988 | Msa1357950:CDS |
CTGCCACTATGTTTACTGCT+TGG | 0.501177 | tig0016220:+71601 | None:intergenic |
ACTTCAGCATGATTATTTGT+CGG | 0.502778 | tig0016220:+73448 | None:intergenic |
AAATTCCTCATCCATTTCAT+CGG | 0.503321 | tig0016220:+71059 | None:intergenic |
CCTACGGGTTCAATGATGAA+TGG | 0.504774 | tig0016220:-73418 | Msa1357950:CDS |
AGTATTACATGATCTTCAAA+AGG | 0.505539 | tig0016220:+72407 | None:intergenic |
TCATTCTAGATGGTTCAACT+TGG | 0.507484 | tig0016220:-72285 | Msa1357950:CDS |
CGTATCACTGTCGTAGTAGC+AGG | 0.507663 | tig0016220:+72635 | None:intergenic |
GCTGAAGTCCATGGACCTAC+GGG | 0.510349 | tig0016220:-73433 | Msa1357950:CDS |
ATCGCCTTGACGATAAGAAA+GGG | 0.511259 | tig0016220:-72766 | Msa1357950:CDS |
AACATAGTGGCAGCGCGGCT+CGG | 0.511333 | tig0016220:-71591 | Msa1357950:CDS |
GGAAGCCTGTTTCGAAATCT+GGG | 0.513817 | tig0016220:+70781 | None:intergenic |
TTTGCAGTTGGAAAATGGTT+AGG | 0.514024 | tig0016220:-71444 | Msa1357950:CDS |
TGTACTAGAAGTTGTGATCA+AGG | 0.515018 | tig0016220:-72891 | Msa1357950:CDS |
AAAAGATCTTCATTCCATTG+TGG | 0.517456 | tig0016220:+72446 | None:intergenic |
CAGTTATGGAGGCCACCAAT+TGG | 0.517888 | tig0016220:-72119 | Msa1357950:CDS |
GAAAGAAGTTTGCCTTGCTA+CGG | 0.518974 | tig0016220:+71493 | None:intergenic |
TTTGTATGTCAGGGTCGTTA+AGG | 0.519023 | tig0016220:-73071 | Msa1357950:CDS |
AAACCAGCCACCATTTGAAA+AGG | 0.520236 | tig0016220:+70829 | None:intergenic |
ACAAGTCCGTTTCTCGGTGG+AGG | 0.522181 | tig0016220:-73169 | Msa1357950:CDS |
TCCCGAAAATGCATTACGTT+AGG | 0.522411 | tig0016220:-71659 | Msa1357950:CDS |
TGTACTAGCTTCATAGGTTG+TGG | 0.523049 | tig0016220:+73241 | None:intergenic |
TGCATGTGTACTAGCTTCAT+AGG | 0.523340 | tig0016220:+73235 | None:intergenic |
AGCAAAATACGGTCACAAAT+GGG | 0.523407 | tig0016220:-72009 | Msa1357950:CDS |
CACAATCTACTACCCAAAGA+TGG | 0.523857 | tig0016220:-73850 | Msa1357950:CDS |
TTTGTAGAACTTTACTTCGA+CGG | 0.525442 | tig0016220:-73808 | Msa1357950:CDS |
CTCCCGGTAAGATCCATAGA+AGG | 0.525748 | tig0016220:+73037 | None:intergenic |
CTATGATAAGAATCAGAATC+CGG | 0.528818 | tig0016220:-72960 | Msa1357950:CDS |
TCCGTTTCTCGGTGGAGGAA+GGG | 0.529722 | tig0016220:-73164 | Msa1357950:CDS |
TAGTAGCTTTGGAATGGCAG+TGG | 0.529952 | tig0016220:+73668 | None:intergenic |
TCTCGCGTAAGAGGTGAGCT+TGG | 0.536637 | tig0016220:-73541 | Msa1357950:CDS |
ATTTCATCAGCTTCATACTT+CGG | 0.537653 | tig0016220:+73277 | None:intergenic |
GAATGCGGTATGATCGTTTG+AGG | 0.538021 | tig0016220:-70999 | Msa1357950:CDS |
TTGATGCTAGCTGTTTGGAT+TGG | 0.541583 | tig0016220:-72725 | Msa1357950:CDS |
GAGTCTTGATCCATTTGTTG+AGG | 0.542333 | tig0016220:-73017 | Msa1357950:CDS |
TACATGATCTTCAAAAGGCT+CGG | 0.542481 | tig0016220:+72412 | None:intergenic |
TCCATACACCTATCAAGAAT+AGG | 0.544412 | tig0016220:+71316 | None:intergenic |
TCTCCCCTTTCTTATCGTCA+AGG | 0.547579 | tig0016220:+72762 | None:intergenic |
TCATTGAACCCGTAGGTCCA+TGG | 0.548824 | tig0016220:+73425 | None:intergenic |
TATCGCCTTGACGATAAGAA+AGG | 0.548988 | tig0016220:-72767 | Msa1357950:CDS |
GGTGGAGGAAGGGTTGTTGG+CGG | 0.552425 | tig0016220:-73154 | Msa1357950:CDS |
AAGTTAGGGGTAGATGTGGT+TGG | 0.552972 | tig0016220:-73877 | Msa1357950:CDS |
AATAATCATGCTGAAGTCCA+TGG | 0.553116 | tig0016220:-73442 | Msa1357950:CDS |
TTGAGTTAGTAGCTTTGGAA+TGG | 0.553431 | tig0016220:+73662 | None:intergenic |
AAGAAGTTGATCGGTGCAGA+CGG | 0.553790 | tig0016220:+70760 | None:intergenic |
GATCATACCGCATTCTTACA+AGG | 0.554571 | tig0016220:+71007 | None:intergenic |
GTAGGTGATTTGGCTAGCCA+GGG | 0.554831 | tig0016220:-70949 | Msa1357950:CDS |
TGTGGGTTTAGAGTTCTAGC+AGG | 0.559920 | tig0016220:+72464 | None:intergenic |
GTGTAGGCAAAATCAACTCC+GGG | 0.562576 | tig0016220:+71349 | None:intergenic |
ATGGAGCATGCGCCGTAGCA+AGG | 0.566672 | tig0016220:-71505 | Msa1357950:CDS |
AACTAGATCATATGTACTTG+CGG | 0.568364 | tig0016220:+73108 | None:intergenic |
TTCTTGTGTTCATGTGTGGA+GGG | 0.569126 | tig0016220:+71106 | None:intergenic |
ATTCTTGTGTTCATGTGTGG+AGG | 0.569293 | tig0016220:+71105 | None:intergenic |
AAGACAACTGCATCAGCTTG+AGG | 0.569540 | tig0016220:+73595 | None:intergenic |
AGTGTAGGCAAAATCAACTC+CGG | 0.570441 | tig0016220:+71348 | None:intergenic |
CGCCTCTCCACAGCGTTCAG+CGG | 0.570587 | tig0016220:+72326 | None:intergenic |
ATTTGGCTAGCCAGGGTGAG+AGG | 0.571757 | tig0016220:-70942 | Msa1357950:CDS |
CAGCATCAACAACACTCCAC+TGG | 0.572183 | tig0016220:-73322 | Msa1357950:CDS |
CTTAAAGTTAGGGGTAGATG+TGG | 0.572186 | tig0016220:-73881 | Msa1357950:CDS |
CTTTCGGTTGAAGATCGAGT+TGG | 0.574501 | tig0016220:-72386 | Msa1357950:CDS |
AGACAACTGCATCAGCTTGA+GGG | 0.574535 | tig0016220:+73596 | None:intergenic |
AACAAATGGATCAAGACTCC+CGG | 0.576070 | tig0016220:+73021 | None:intergenic |
CGTGGCTGGTAGAATACAAA+CGG | 0.577843 | tig0016220:-70974 | Msa1357950:CDS |
TTCCTTCTATGGATCTTACC+GGG | 0.579035 | tig0016220:-73039 | Msa1357950:CDS |
ACTATCCGTTGGAAAAGCGC+GGG | 0.579782 | tig0016220:-73570 | Msa1357950:CDS |
CCTACTGTGAGGACTGTGGC+AGG | 0.580485 | tig0016220:+71915 | None:intergenic |
CACTATCCGTTGGAAAAGCG+CGG | 0.582031 | tig0016220:-73571 | Msa1357950:CDS |
TAGCAGGTTTCTATTTCATG+AGG | 0.582086 | tig0016220:-70807 | Msa1357950:CDS |
CGATACCATTCGGGTGCCAA+AGG | 0.582226 | tig0016220:+72785 | None:intergenic |
CTACTACCCAAAGATGGAGA+AGG | 0.583168 | tig0016220:-73844 | Msa1357950:CDS |
AGTTGTCTTGCACTATCCGT+TGG | 0.586747 | tig0016220:-73581 | Msa1357950:CDS |
CAGTTCTTGCAGGAAGTCGA+CGG | 0.588288 | tig0016220:+70737 | None:intergenic |
GTCGGCATGGACTCAACAGA+AGG | 0.588951 | tig0016220:+73466 | None:intergenic |
GAGATTCTTGTGTTCATGTG+TGG | 0.591639 | tig0016220:+71102 | None:intergenic |
TTCAGATGCAGCTTCACCTG+TGG | 0.591854 | tig0016220:-72666 | Msa1357950:CDS |
TACGACAGTGATACGTTCAA+AGG | 0.595585 | tig0016220:-72627 | Msa1357950:CDS |
GACTCCACCCAATGAAAACA+AGG | 0.596227 | tig0016220:-72064 | Msa1357950:CDS |
TCGAGTTGCATGACTGCGAA+TGG | 0.597451 | tig0016220:+71636 | None:intergenic |
CTTGGAAAAGCCTGTTGCCG+TGG | 0.598251 | tig0016220:-72267 | Msa1357950:CDS |
ACCGCTTCGTAAAGAAGTCG+TGG | 0.599851 | tig0016220:-71556 | Msa1357950:CDS |
AGTTCTAAAACACCAATTGG+TGG | 0.601566 | tig0016220:+72107 | None:intergenic |
GTGCATGAATCCTCTCACCC+TGG | 0.601936 | tig0016220:+70932 | None:intergenic |
TTGCAAGCAGAATTCAGCTA+CGG | 0.601937 | tig0016220:-72217 | Msa1357950:CDS |
GTACATATGATCTAGTTGAA+AGG | 0.603113 | tig0016220:-73102 | Msa1357950:CDS |
TCCCTAACACAAACCATCAA+CGG | 0.603684 | tig0016220:-73348 | Msa1357950:CDS |
CAGCTACGGCTATGTCTGGA+TGG | 0.603841 | tig0016220:-72203 | Msa1357950:CDS |
GAAAATGGGAGAACTTCACT+TGG | 0.605162 | tig0016220:-71742 | Msa1357950:CDS |
ACACCCCGATGAAATGGATG+AGG | 0.606414 | tig0016220:-71064 | Msa1357950:CDS |
TATGATCAACTTAAAGTTAG+GGG | 0.607138 | tig0016220:-73890 | Msa1357950:CDS |
TGTGTGGAGGGTATCTTGGT+CGG | 0.608323 | tig0016220:+71118 | None:intergenic |
GGACCTTGACATATGCATCC+GGG | 0.608916 | tig0016220:+72522 | None:intergenic |
GTCACAAATGGGTCAGAACA+AGG | 0.610662 | tig0016220:-71998 | Msa1357950:CDS |
ATGAAAACAAGGGATGGTAG+AGG | 0.612015 | tig0016220:-72053 | Msa1357950:CDS |
CTAGAACTCTAAACCCACAA+TGG | 0.614323 | tig0016220:-72460 | Msa1357950:CDS |
CAAAGACTTGAAAATTGGGA+AGG | 0.616941 | tig0016220:-71850 | Msa1357950:CDS |
CACCCAATGAAAACAAGGGA+TGG | 0.618631 | tig0016220:-72059 | Msa1357950:CDS |
CATGAACACAAGAATCTCAC+AGG | 0.619367 | tig0016220:-71097 | Msa1357950:CDS |
GTTGGGTGAAGAACAAGCAA+TGG | 0.619420 | tig0016220:+71774 | None:intergenic |
ACGACTTCTTTACGAAGCGG+TGG | 0.619488 | tig0016220:+71558 | None:intergenic |
ATAGTCCTTTGGCACCCGAA+TGG | 0.620871 | tig0016220:-72790 | Msa1357950:CDS |
TACCGCTGAACGCTGTGGAG+AGG | 0.622911 | tig0016220:-72328 | Msa1357950:CDS |
TCCACGACTTCTTTACGAAG+CGG | 0.627157 | tig0016220:+71555 | None:intergenic |
CCTGCCACAGTCCTCACAGT+AGG | 0.628716 | tig0016220:-71915 | Msa1357950:CDS |
GTGAGTATCTGCATATCCAG+TGG | 0.628850 | tig0016220:+73306 | None:intergenic |
TTTGACAATTCCCAAATCAG+TGG | 0.630492 | tig0016220:-71888 | Msa1357950:CDS |
ATCCTGACCTTGTAAGAATG+CGG | 0.634955 | tig0016220:-71014 | Msa1357950:CDS |
AATACAACGAGCAATACACT+TGG | 0.635555 | tig0016220:-71950 | Msa1357950:CDS |
AGCACAAGACTTGATTCCAA+CGG | 0.636163 | tig0016220:-72558 | Msa1357950:CDS |
TACCATACCGCTGAACGCTG+TGG | 0.636602 | tig0016220:-72333 | Msa1357950:CDS |
CTTCAGATGATCAACATCCA+CGG | 0.640502 | tig0016220:+72250 | None:intergenic |
AGTCGACGGAAGAAGTTGAT+CGG | 0.641660 | tig0016220:+70751 | None:intergenic |
GTCGAAGTAAAGTTCTACAA+AGG | 0.652130 | tig0016220:+73810 | None:intergenic |
TCACCAAGCAGTAAACATAG+TGG | 0.653759 | tig0016220:-71604 | Msa1357950:CDS |
GGTGCCAAAGGACTATCTGG+TGG | 0.654724 | tig0016220:+72797 | None:intergenic |
GTTGATGGTTTGTGTTAGGG+AGG | 0.657066 | tig0016220:+73350 | None:intergenic |
GAACGCTGTGGAGAGGCGTG+CGG | 0.658744 | tig0016220:-72321 | Msa1357950:CDS |
AAAAGATGAGATCATTGGGA+GGG | 0.659454 | tig0016220:-72357 | Msa1357950:CDS |
CCATTCATCATTGAACCCGT+AGG | 0.661796 | tig0016220:+73418 | None:intergenic |
TGAGAAACAACACATGAACA+AGG | 0.662150 | tig0016220:+71385 | None:intergenic |
CCACTGCAAAACAGTTATGG+AGG | 0.665722 | tig0016220:-72130 | Msa1357950:CDS |
GTGATGAAATGTGTGTCTTG+AGG | 0.667671 | tig0016220:+73372 | None:intergenic |
CTACGGCTATGTCTGGATGG+AGG | 0.669332 | tig0016220:-72200 | Msa1357950:CDS |
GTGAGAATTGGCAATTACAG+AGG | 0.669944 | tig0016220:-72995 | Msa1357950:CDS |
TTTCCCGGATGCATATGTCA+AGG | 0.673533 | tig0016220:-72525 | Msa1357950:CDS |
TCGCCTTGACGATAAGAAAG+GGG | 0.675420 | tig0016220:-72765 | Msa1357950:CDS |
GAAACAAGTCCGTTTCTCGG+TGG | 0.679691 | tig0016220:-73172 | Msa1357950:CDS |
GTATGATCGTTTGAGGAGCG+TGG | 0.680386 | tig0016220:-70992 | Msa1357950:CDS |
ACACGAACGTACCACAACCT+CGG | 0.680879 | tig0016220:+72593 | None:intergenic |
GGTTAGGTGATATTTGCATG+TGG | 0.684481 | tig0016220:-71428 | Msa1357950:CDS |
GAAAAGATGAGATCATTGGG+AGG | 0.684584 | tig0016220:-72358 | Msa1357950:CDS |
ATACAACGAGCAATACACTT+GGG | 0.691267 | tig0016220:-71949 | Msa1357950:CDS |
TATCGACTCTTGAAACAGGA+CGG | 0.694274 | tig0016220:-71815 | Msa1357950:CDS |
CAACGAGCAATACACTTGGG+AGG | 0.698127 | tig0016220:-71946 | Msa1357950:CDS |
GAATGGTTTATCTCGTGACA+AGG | 0.701389 | tig0016220:-73401 | Msa1357950:CDS |
ACTCCACCCAATGAAAACAA+GGG | 0.702014 | tig0016220:-72063 | Msa1357950:CDS |
GACACCTACTGTGAGGACTG+TGG | 0.709482 | tig0016220:+71911 | None:intergenic |
CAAAGGTCTATCATGCTCCG+AGG | 0.711392 | tig0016220:-72610 | Msa1357950:CDS |
ATGAATAAAGAAGTAGCACG+CGG | 0.714106 | tig0016220:+70892 | None:intergenic |
CAGTAAACATAGTGGCAGCG+CGG | 0.720769 | tig0016220:-71596 | Msa1357950:CDS |
TGTCAAAGACACCTACTGTG+AGG | 0.734255 | tig0016220:+71904 | None:intergenic |
ATAAGAATCAGAATCCGGAG+TGG | 0.742906 | tig0016220:-72955 | Msa1357950:CDS |
ATTCCTCATCCATTTCATCG+GGG | 0.747292 | tig0016220:+71061 | None:intergenic |
GGACAAAAGAAGTACCTGTG+AGG | 0.754029 | tig0016220:+73617 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAAGATCCTTTTCTTTAA+TGG | + | tig0016220:70847-70866 | None:intergenic | 20.0% |
!!! | TATCAGTGATGTAAATTTTA+AGG | + | tig0016220:71097-71116 | None:intergenic | 20.0% |
!! | TATGCAATCATGTATAAATA+GGG | + | tig0016220:73391-73410 | None:intergenic | 20.0% |
!! | ATATGCAATCATGTATAAAT+AGG | + | tig0016220:73392-73411 | None:intergenic | 20.0% |
!!! | ATTTGGAATTGAGGATTTTA+TGG | + | tig0016220:71126-71145 | None:intergenic | 25.0% |
!!! | GATGTATTTTTTGTATGTCA+GGG | - | tig0016220:71532-71551 | Msa1357950:CDS | 25.0% |
! | AGTATTACATGATCTTCAAA+AGG | + | tig0016220:72208-72227 | None:intergenic | 25.0% |
! | TGAAGATCATGTAATACTTT+CGG | - | tig0016220:72210-72229 | Msa1357950:CDS | 25.0% |
! | ATAGAATCATTCATTCTAGA+TGG | - | tig0016220:72317-72336 | Msa1357950:CDS | 25.0% |
! | ACATATTGTGTAGCAAAATA+CGG | - | tig0016220:72592-72611 | Msa1357950:CDS | 25.0% |
! | ACAACAAAGACTTGAAAATT+GGG | - | tig0016220:72758-72777 | Msa1357950:CDS | 25.0% |
! | CCTGATATTGAAAATAAAGT+TGG | + | tig0016220:73472-73491 | None:intergenic | 25.0% |
!!! | CCAACTTTATTTTCAATATC+AGG | - | tig0016220:73469-73488 | Msa1357950:CDS | 25.0% |
!! | ATATGTTACTCCTTTTCAAA+TGG | - | tig0016220:73773-73792 | Msa1357950:CDS | 25.0% |
TTTGTAGAACTTTACTTCGA+CGG | - | tig0016220:70804-70823 | Msa1357950:CDS | 30.0% | |
! | TAATGGTTGTTCGAAACTTT+TGG | + | tig0016220:70830-70849 | None:intergenic | 30.0% |
TCGAACAACCATTAAAGAAA+AGG | - | tig0016220:70836-70855 | Msa1357950:CDS | 30.0% | |
AAAAGGATCTTAATCCTGTT+TGG | - | tig0016220:70853-70872 | Msa1357950:CDS | 30.0% | |
ACTAACTCAAGTTCATTTCT+TGG | - | tig0016220:70963-70982 | Msa1357950:CDS | 30.0% | |
ACTTCAGCATGATTATTTGT+CGG | + | tig0016220:71167-71186 | None:intergenic | 30.0% | |
ATTTCATCAGCTTCATACTT+CGG | + | tig0016220:71338-71357 | None:intergenic | 30.0% | |
TCTTTAAGTGCAAAATCAAC+CGG | + | tig0016220:71422-71441 | None:intergenic | 30.0% | |
AACTAGATCATATGTACTTG+CGG | + | tig0016220:71507-71526 | None:intergenic | 30.0% | |
GTACATATGATCTAGTTGAA+AGG | - | tig0016220:71510-71529 | Msa1357950:CDS | 30.0% | |
!!! | GGATGTATTTTTTGTATGTC+AGG | - | tig0016220:71531-71550 | Msa1357950:CDS | 30.0% |
CTGATTCTTATCATAGTGTT+TGG | + | tig0016220:71648-71667 | None:intergenic | 30.0% | |
CTATGATAAGAATCAGAATC+CGG | - | tig0016220:71652-71671 | Msa1357950:CDS | 30.0% | |
! | TCAGGTTTTTGCATTTTCAA+AGG | - | tig0016220:71682-71701 | Msa1357950:CDS | 30.0% |
! | CTCATCAAAGATGATTTTGT+AGG | - | tig0016220:71752-71771 | Msa1357950:CDS | 30.0% |
!! | ATGATTTTGTAGGTATTGTG+AGG | - | tig0016220:71762-71781 | Msa1357950:CDS | 30.0% |
AAAGATCTTCATTCCATTGT+GGG | + | tig0016220:72168-72187 | None:intergenic | 30.0% | |
AAAAGATCTTCATTCCATTG+TGG | + | tig0016220:72169-72188 | None:intergenic | 30.0% | |
CACAACAAAGACTTGAAAAT+TGG | - | tig0016220:72757-72776 | Msa1357950:CDS | 30.0% | |
! | AATAGGTAGAGAAAAAGTGT+AGG | + | tig0016220:73282-73301 | None:intergenic | 30.0% |
TTTCTCTACCTATTCTTGAT+AGG | - | tig0016220:73288-73307 | Msa1357950:CDS | 30.0% | |
AAATTCCTCATCCATTTCAT+CGG | + | tig0016220:73556-73575 | None:intergenic | 30.0% | |
GTCGAAGTAAAGTTCTACAA+AGG | + | tig0016220:70805-70824 | None:intergenic | 35.0% | |
AAGAGTGAGATAGTGAAGAT+TGG | + | tig0016220:70913-70932 | None:intergenic | 35.0% | |
!! | TTGAGTTAGTAGCTTTGGAA+TGG | + | tig0016220:70953-70972 | None:intergenic | 35.0% |
TGAACTTGAGTTAGTAGCTT+TGG | + | tig0016220:70958-70977 | None:intergenic | 35.0% | |
! | GGAATTGAGGATTTTATGGT+TGG | + | tig0016220:71122-71141 | None:intergenic | 35.0% |
! | AACAGAAGGATTTGGAATTG+AGG | + | tig0016220:71135-71154 | None:intergenic | 35.0% |
AATAATCATGCTGAAGTCCA+TGG | - | tig0016220:71170-71189 | Msa1357950:intron | 35.0% | |
AAAGAAACAAGTCCGTTTCT+CGG | - | tig0016220:71437-71456 | Msa1357950:CDS | 35.0% | |
TGTACTAGAAGTTGTGATCA+AGG | - | tig0016220:71721-71740 | Msa1357950:CDS | 35.0% | |
AAGAAAGGGGAGAAAGTTAA+AGG | - | tig0016220:71860-71879 | Msa1357950:CDS | 35.0% | |
!! | ATGAAGCATTTTCTGATGCA+TGG | - | tig0016220:71921-71940 | Msa1357950:CDS | 35.0% |
!!! | CTGTTTTTGTTTTCAGCACT+TGG | + | tig0016220:72126-72145 | None:intergenic | 35.0% |
TACATGATCTTCAAAAGGCT+CGG | + | tig0016220:72203-72222 | None:intergenic | 35.0% | |
AAAAGATGAGATCATTGGGA+GGG | - | tig0016220:72255-72274 | Msa1357950:CDS | 35.0% | |
TCATTCTAGATGGTTCAACT+TGG | - | tig0016220:72327-72346 | Msa1357950:CDS | 35.0% | |
!! | AGTTCTAAAACACCAATTGG+TGG | + | tig0016220:72508-72527 | None:intergenic | 35.0% |
!!! | CCAATTGGTGTTTTAGAACT+CGG | - | tig0016220:72508-72527 | Msa1357950:CDS | 35.0% |
!!! | TACCATCCCTTGTTTTCATT+GGG | + | tig0016220:72558-72577 | None:intergenic | 35.0% |
TAGCAAAATACGGTCACAAA+TGG | - | tig0016220:72602-72621 | Msa1357950:CDS | 35.0% | |
AGCAAAATACGGTCACAAAT+GGG | - | tig0016220:72603-72622 | Msa1357950:CDS | 35.0% | |
! | GTGTATTGCTCGTTGTATTT+TGG | + | tig0016220:72661-72680 | None:intergenic | 35.0% |
AATACAACGAGCAATACACT+TGG | - | tig0016220:72662-72681 | Msa1357950:CDS | 35.0% | |
ATACAACGAGCAATACACTT+GGG | - | tig0016220:72663-72682 | Msa1357950:CDS | 35.0% | |
TTTGACAATTCCCAAATCAG+TGG | - | tig0016220:72724-72743 | Msa1357950:CDS | 35.0% | |
CAAAGACTTGAAAATTGGGA+AGG | - | tig0016220:72762-72781 | Msa1357950:CDS | 35.0% | |
! | CCATTTTCTTAACACCAGTT+GGG | + | tig0016220:72858-72877 | None:intergenic | 35.0% |
! | CCAACTGGTGTTAAGAAAAT+GGG | - | tig0016220:72856-72875 | Msa1357950:CDS | 35.0% |
TTTGCAGTTGGAAAATGGTT+AGG | - | tig0016220:73168-73187 | Msa1357950:CDS | 35.0% | |
TGAACAAGGACTGTTGTAAT+AGG | + | tig0016220:73216-73235 | None:intergenic | 35.0% | |
TGAGAAACAACACATGAACA+AGG | + | tig0016220:73230-73249 | None:intergenic | 35.0% | |
!! | TCATGTGTTGTTTCTCATGT+TGG | - | tig0016220:73233-73252 | Msa1357950:CDS | 35.0% |
ACCTATTCTTGATAGGTGTA+TGG | - | tig0016220:73295-73314 | Msa1357950:CDS | 35.0% | |
TCCATACACCTATCAAGAAT+AGG | + | tig0016220:73299-73318 | None:intergenic | 35.0% | |
AATTCCTCATCCATTTCATC+GGG | + | tig0016220:73555-73574 | None:intergenic | 35.0% | |
ATGAATAAAGAAGTAGCACG+CGG | + | tig0016220:73723-73742 | None:intergenic | 35.0% | |
! | TTTCTGTTTGTTAGCTGCTT+TGG | - | tig0016220:73746-73765 | Msa1357950:CDS | 35.0% |
! | TGTTACTCCTTTTCAAATGG+TGG | - | tig0016220:73776-73795 | Msa1357950:CDS | 35.0% |
TAGCAGGTTTCTATTTCATG+AGG | - | tig0016220:73805-73824 | Msa1357950:CDS | 35.0% | |
AACATACTATCAGTTCTTGC+AGG | + | tig0016220:73888-73907 | None:intergenic | 35.0% | |
CTTAAAGTTAGGGGTAGATG+TGG | - | tig0016220:70731-70750 | Msa1357950:CDS | 40.0% | |
CACAATCTACTACCCAAAGA+TGG | - | tig0016220:70762-70781 | Msa1357950:CDS | 40.0% | |
TAGAAGCTCTCATTCCAAAC+AGG | + | tig0016220:70870-70889 | None:intergenic | 40.0% | |
GTGAGATAGTGAAGATTGGA+AGG | + | tig0016220:70909-70928 | None:intergenic | 40.0% | |
ATGGACTCAACAGAAGGATT+TGG | + | tig0016220:71143-71162 | None:intergenic | 40.0% | |
AGCATGATTATTTGTCGGCA+TGG | + | tig0016220:71162-71181 | None:intergenic | 40.0% | |
GAATGGTTTATCTCGTGACA+AGG | - | tig0016220:71211-71230 | Msa1357950:intron | 40.0% | |
GTGATGAAATGTGTGTCTTG+AGG | + | tig0016220:71243-71262 | None:intergenic | 40.0% | |
TCCCTAACACAAACCATCAA+CGG | - | tig0016220:71264-71283 | Msa1357950:intron | 40.0% | |
! | TGTACTAGCTTCATAGGTTG+TGG | + | tig0016220:71374-71393 | None:intergenic | 40.0% |
! | TGCATGTGTACTAGCTTCAT+AGG | + | tig0016220:71380-71399 | None:intergenic | 40.0% |
CTCAGTTACATCACTACAAC+CGG | - | tig0016220:71400-71419 | Msa1357950:CDS | 40.0% | |
TTTGTATGTCAGGGTCGTTA+AGG | - | tig0016220:71541-71560 | Msa1357950:CDS | 40.0% | |
CTTCCTTCTATGGATCTTAC+CGG | - | tig0016220:71572-71591 | Msa1357950:CDS | 40.0% | |
TTCCTTCTATGGATCTTACC+GGG | - | tig0016220:71573-71592 | Msa1357950:CDS | 40.0% | |
AACAAATGGATCAAGACTCC+CGG | + | tig0016220:71594-71613 | None:intergenic | 40.0% | |
! | GAGTCTTGATCCATTTGTTG+AGG | - | tig0016220:71595-71614 | Msa1357950:CDS | 40.0% |
CCAATTCTCACCTCAACAAA+TGG | + | tig0016220:71608-71627 | None:intergenic | 40.0% | |
! | CCATTTGTTGAGGTGAGAAT+TGG | - | tig0016220:71605-71624 | Msa1357950:CDS | 40.0% |
GTGAGAATTGGCAATTACAG+AGG | - | tig0016220:71617-71636 | Msa1357950:CDS | 40.0% | |
ATAAGAATCAGAATCCGGAG+TGG | - | tig0016220:71657-71676 | Msa1357950:CDS | 40.0% | |
CTATCTGGTGGAACTCTTAA+AGG | + | tig0016220:71806-71825 | None:intergenic | 40.0% | |
TATCGCCTTGACGATAAGAA+AGG | - | tig0016220:71845-71864 | Msa1357950:CDS | 40.0% | |
ATCGCCTTGACGATAAGAAA+GGG | - | tig0016220:71846-71865 | Msa1357950:CDS | 40.0% | |
TTGATGCTAGCTGTTTGGAT+TGG | - | tig0016220:71887-71906 | Msa1357950:CDS | 40.0% | |
TACGACAGTGATACGTTCAA+AGG | - | tig0016220:71985-72004 | Msa1357950:CDS | 40.0% | |
AGCACAAGACTTGATTCCAA+CGG | - | tig0016220:72054-72073 | Msa1357950:CDS | 40.0% | |
CTAGAACTCTAAACCCACAA+TGG | - | tig0016220:72152-72171 | Msa1357950:CDS | 40.0% | |
! | CCAATGATCTCATCTTTTCC+CGG | + | tig0016220:72253-72272 | None:intergenic | 40.0% |
CGGGAAAAGATGAGATCATT+GGG | - | tig0016220:72251-72270 | Msa1357950:CDS | 40.0% | |
GAAAAGATGAGATCATTGGG+AGG | - | tig0016220:72254-72273 | Msa1357950:CDS | 40.0% | |
CTTCAGATGATCAACATCCA+CGG | + | tig0016220:72365-72384 | None:intergenic | 40.0% | |
TTGCAAGCAGAATTCAGCTA+CGG | - | tig0016220:72395-72414 | Msa1357950:CDS | 40.0% | |
! | TCCATAACTGTTTTGCAGTG+GGG | + | tig0016220:72483-72502 | None:intergenic | 40.0% |
! | CTCCATAACTGTTTTGCAGT+GGG | + | tig0016220:72484-72503 | None:intergenic | 40.0% |
!! | CCGAGTTCTAAAACACCAAT+TGG | + | tig0016220:72511-72530 | None:intergenic | 40.0% |
ACTCCACCCAATGAAAACAA+GGG | - | tig0016220:72549-72568 | Msa1357950:CDS | 40.0% | |
!!! | CTACCATCCCTTGTTTTCAT+TGG | + | tig0016220:72559-72578 | None:intergenic | 40.0% |
ATGAAAACAAGGGATGGTAG+AGG | - | tig0016220:72559-72578 | Msa1357950:CDS | 40.0% | |
TTCCCAAATCAGTGGTGAAA+AGG | - | tig0016220:72732-72751 | Msa1357950:CDS | 40.0% | |
TCCCAAATCAGTGGTGAAAA+GGG | - | tig0016220:72733-72752 | Msa1357950:CDS | 40.0% | |
!!! | ACCCTTTTCACCACTGATTT+GGG | + | tig0016220:72737-72756 | None:intergenic | 40.0% |
!! | TATCGACTCTTGAAACAGGA+CGG | - | tig0016220:72797-72816 | Msa1357950:CDS | 40.0% |
! | CCCAACTGGTGTTAAGAAAA+TGG | - | tig0016220:72855-72874 | Msa1357950:CDS | 40.0% |
! | CCCATTTTCTTAACACCAGT+TGG | + | tig0016220:72859-72878 | None:intergenic | 40.0% |
GAAAATGGGAGAACTTCACT+TGG | - | tig0016220:72870-72889 | Msa1357950:CDS | 40.0% | |
!!! | GGAGAAGTGGTTTTGAGTAT+AGG | + | tig0016220:72936-72955 | None:intergenic | 40.0% |
!! | TAATGCATTTTCGGGAGAAG+TGG | + | tig0016220:72949-72968 | None:intergenic | 40.0% |
TCCCGAAAATGCATTACGTT+AGG | - | tig0016220:72953-72972 | Msa1357950:CDS | 40.0% | |
! | GCCTAACGTAATGCATTTTC+GGG | + | tig0016220:72957-72976 | None:intergenic | 40.0% |
! | GGCCTAACGTAATGCATTTT+CGG | + | tig0016220:72958-72977 | None:intergenic | 40.0% |
TCACCAAGCAGTAAACATAG+TGG | - | tig0016220:73008-73027 | Msa1357950:CDS | 40.0% | |
!! | CAGATGTTGACTCACATCTA+TGG | - | tig0016220:73088-73107 | Msa1357950:CDS | 40.0% |
GAAAGAAGTTTGCCTTGCTA+CGG | + | tig0016220:73122-73141 | None:intergenic | 40.0% | |
CACCAGAAAAAACTGTCATG+AGG | + | tig0016220:73146-73165 | None:intergenic | 40.0% | |
!! | TTTTCTGGTGTGTTTGCAGT+TGG | - | tig0016220:73156-73175 | Msa1357950:CDS | 40.0% |
GTGTGTTTGCAGTTGGAAAA+TGG | - | tig0016220:73163-73182 | Msa1357950:CDS | 40.0% | |
GGTTAGGTGATATTTGCATG+TGG | - | tig0016220:73184-73203 | Msa1357950:CDS | 40.0% | |
AGTGTAGGCAAAATCAACTC+CGG | + | tig0016220:73267-73286 | None:intergenic | 40.0% | |
TGATAGGTGTATGGAACTTC+AGG | - | tig0016220:73304-73323 | Msa1357950:CDS | 40.0% | |
TTCTTGTGTTCATGTGTGGA+GGG | + | tig0016220:73509-73528 | None:intergenic | 40.0% | |
ATTCTTGTGTTCATGTGTGG+AGG | + | tig0016220:73510-73529 | None:intergenic | 40.0% | |
GAGATTCTTGTGTTCATGTG+TGG | + | tig0016220:73513-73532 | None:intergenic | 40.0% | |
CATGAACACAAGAATCTCAC+AGG | - | tig0016220:73515-73534 | Msa1357950:CDS | 40.0% | |
ATTCCTCATCCATTTCATCG+GGG | + | tig0016220:73554-73573 | None:intergenic | 40.0% | |
! | AGGTCAGGATTTTTGCTTGT+TGG | + | tig0016220:73588-73607 | None:intergenic | 40.0% |
ATCCTGACCTTGTAAGAATG+CGG | - | tig0016220:73598-73617 | Msa1357950:CDS | 40.0% | |
GATCATACCGCATTCTTACA+AGG | + | tig0016220:73608-73627 | None:intergenic | 40.0% | |
GGTAGAATACAAACGGTTGT+AGG | - | tig0016220:73645-73664 | Msa1357950:CDS | 40.0% | |
ACAAACGGTTGTAGGTGATT+TGG | - | tig0016220:73653-73672 | Msa1357950:CDS | 40.0% | |
AAACCAGCCACCATTTGAAA+AGG | + | tig0016220:73786-73805 | None:intergenic | 40.0% | |
AAGTTAGGGGTAGATGTGGT+TGG | - | tig0016220:70735-70754 | Msa1357950:CDS | 45.0% | |
CTACTACCCAAAGATGGAGA+AGG | - | tig0016220:70768-70787 | Msa1357950:CDS | 45.0% | |
GAAGAGCCTTCTCCATCTTT+GGG | + | tig0016220:70777-70796 | None:intergenic | 45.0% | |
AGAAGAGCCTTCTCCATCTT+TGG | + | tig0016220:70778-70797 | None:intergenic | 45.0% | |
!! | TAGTAGCTTTGGAATGGCAG+TGG | + | tig0016220:70947-70966 | None:intergenic | 45.0% |
!! | GGACAAAAGAAGTACCTGTG+AGG | + | tig0016220:70998-71017 | None:intergenic | 45.0% |
AGACAACTGCATCAGCTTGA+GGG | + | tig0016220:71019-71038 | None:intergenic | 45.0% | |
AAGACAACTGCATCAGCTTG+AGG | + | tig0016220:71020-71039 | None:intergenic | 45.0% | |
AGTTGTCTTGCACTATCCGT+TGG | - | tig0016220:71031-71050 | Msa1357950:CDS | 45.0% | |
! | AAAATCCCGCGCTTTTCCAA+CGG | + | tig0016220:71050-71069 | None:intergenic | 45.0% |
CCATTCATCATTGAACCCGT+AGG | + | tig0016220:71197-71216 | None:intergenic | 45.0% | |
CCTACGGGTTCAATGATGAA+TGG | - | tig0016220:71194-71213 | Msa1357950:intron | 45.0% | |
!! | GTTGATGGTTTGTGTTAGGG+AGG | + | tig0016220:71265-71284 | None:intergenic | 45.0% |
!! | GCCGTTGATGGTTTGTGTTA+GGG | + | tig0016220:71268-71287 | None:intergenic | 45.0% |
!! | TGCCGTTGATGGTTTGTGTT+AGG | + | tig0016220:71269-71288 | None:intergenic | 45.0% |
GTGAGTATCTGCATATCCAG+TGG | + | tig0016220:71309-71328 | None:intergenic | 45.0% | |
AGTTCCACCAGATAGTCCTT+TGG | - | tig0016220:71811-71830 | Msa1357950:CDS | 45.0% | |
ATCGTCAAGGCGATACCATT+CGG | + | tig0016220:71840-71859 | None:intergenic | 45.0% | |
TCGCCTTGACGATAAGAAAG+GGG | - | tig0016220:71847-71866 | Msa1357950:CDS | 45.0% | |
TCTCCCCTTTCTTATCGTCA+AGG | + | tig0016220:71853-71872 | None:intergenic | 45.0% | |
!! | GTGAGTTGATGCTAGCTGTT+TGG | - | tig0016220:71882-71901 | Msa1357950:CDS | 45.0% |
AACGGAGAAAAACCGTTTCC+CGG | - | tig0016220:72072-72091 | Msa1357950:CDS | 45.0% | |
TGACATATGCATCCGGGAAA+CGG | + | tig0016220:72087-72106 | None:intergenic | 45.0% | |
TTTCCCGGATGCATATGTCA+AGG | - | tig0016220:72087-72106 | Msa1357950:CDS | 45.0% | |
TGGACCTTGACATATGCATC+CGG | + | tig0016220:72094-72113 | None:intergenic | 45.0% | |
GCATATGTCAAGGTCCAGAT+AGG | - | tig0016220:72097-72116 | Msa1357950:CDS | 45.0% | |
TCAGCACTTGGTTTCCTATC+TGG | + | tig0016220:72114-72133 | None:intergenic | 45.0% | |
! | TGTGGGTTTAGAGTTCTAGC+AGG | + | tig0016220:72151-72170 | None:intergenic | 45.0% |
CTTTCGGTTGAAGATCGAGT+TGG | - | tig0016220:72226-72245 | Msa1357950:CDS | 45.0% | |
CCGGGAAAAGATGAGATCAT+TGG | - | tig0016220:72250-72269 | Msa1357950:CDS | 45.0% | |
AATTCAGCTACGGCTATGTC+TGG | - | tig0016220:72405-72424 | Msa1357950:CDS | 45.0% | |
! | CCTCCATAACTGTTTTGCAG+TGG | + | tig0016220:72485-72504 | None:intergenic | 45.0% |
CCACTGCAAAACAGTTATGG+AGG | - | tig0016220:72482-72501 | Msa1357950:CDS | 45.0% | |
GACTCCACCCAATGAAAACA+AGG | - | tig0016220:72548-72567 | Msa1357950:CDS | 45.0% | |
!!! | CATCCCTTGTTTTCATTGGG+TGG | + | tig0016220:72555-72574 | None:intergenic | 45.0% |
CACCCAATGAAAACAAGGGA+TGG | - | tig0016220:72553-72572 | Msa1357950:CDS | 45.0% | |
GTCACAAATGGGTCAGAACA+AGG | - | tig0016220:72614-72633 | Msa1357950:CDS | 45.0% | |
TGTCAAAGACACCTACTGTG+AGG | + | tig0016220:72711-72730 | None:intergenic | 45.0% | |
!! | GACCCTTTTCACCACTGATT+TGG | + | tig0016220:72738-72757 | None:intergenic | 45.0% |
!! | CGCATATCGACTCTTGAAAC+AGG | - | tig0016220:72793-72812 | Msa1357950:CDS | 45.0% |
GTTGGGTGAAGAACAAGCAA+TGG | + | tig0016220:72841-72860 | None:intergenic | 45.0% | |
TTGCTTGTTCTTCACCCAAC+TGG | - | tig0016220:72841-72860 | Msa1357950:CDS | 45.0% | |
CTGCCACTATGTTTACTGCT+TGG | + | tig0016220:73014-73033 | None:intergenic | 45.0% | |
TCCACGACTTCTTTACGAAG+CGG | + | tig0016220:73060-73079 | None:intergenic | 45.0% | |
!!! | CGCCTCATGACAGTTTTTTC+TGG | - | tig0016220:73141-73160 | Msa1357950:CDS | 45.0% |
!! | TCTCATGTTGGTTTGCTTCC+CGG | - | tig0016220:73245-73264 | Msa1357950:CDS | 45.0% |
GTGTAGGCAAAATCAACTCC+GGG | + | tig0016220:73266-73285 | None:intergenic | 45.0% | |
!! | TTCATGTGTGGAGGGTATCT+TGG | + | tig0016220:73501-73520 | None:intergenic | 45.0% |
TGTAGTACACCCCGATGAAA+TGG | - | tig0016220:73542-73561 | Msa1357950:CDS | 45.0% | |
TACCGCATTCTTACAAGGTC+AGG | + | tig0016220:73603-73622 | None:intergenic | 45.0% | |
GAATGCGGTATGATCGTTTG+AGG | - | tig0016220:73613-73632 | Msa1357950:CDS | 45.0% | |
CGTGGCTGGTAGAATACAAA+CGG | - | tig0016220:73638-73657 | Msa1357950:CDS | 45.0% | |
! | ACTCCTTTTCAAATGGTGGC+TGG | - | tig0016220:73780-73799 | Msa1357950:CDS | 45.0% |
GGAAGCCTGTTTCGAAATCT+GGG | + | tig0016220:73834-73853 | None:intergenic | 45.0% | |
! | AAGAAGTTGATCGGTGCAGA+CGG | + | tig0016220:73855-73874 | None:intergenic | 45.0% |
! | AGTCGACGGAAGAAGTTGAT+CGG | + | tig0016220:73864-73883 | None:intergenic | 45.0% |
! | CTTGGCAAAGTTAGCCTCAC+AGG | - | tig0016220:70981-71000 | Msa1357950:CDS | 50.0% |
CACTATCCGTTGGAAAAGCG+CGG | - | tig0016220:71041-71060 | Msa1357950:CDS | 50.0% | |
! | ACTATCCGTTGGAAAAGCGC+GGG | - | tig0016220:71042-71061 | Msa1357950:CDS | 50.0% |
! | GGGATTTTCTCTCGCGTAAG+AGG | - | tig0016220:71062-71081 | Msa1357950:CDS | 50.0% |
TGCTGAAGTCCATGGACCTA+CGG | - | tig0016220:71178-71197 | Msa1357950:intron | 50.0% | |
TCATTGAACCCGTAGGTCCA+TGG | + | tig0016220:71190-71209 | None:intergenic | 50.0% | |
GTTGATGCTGATGCCGTTGA+TGG | + | tig0016220:71280-71299 | None:intergenic | 50.0% | |
CAGCATCAACAACACTCCAC+TGG | - | tig0016220:71290-71309 | Msa1357950:intron | 50.0% | |
GAAACAAGTCCGTTTCTCGG+TGG | - | tig0016220:71440-71459 | Msa1357950:CDS | 50.0% | |
CTCCCGGTAAGATCCATAGA+AGG | + | tig0016220:71578-71597 | None:intergenic | 50.0% | |
GCAAAAACCTGATGCCACTC+CGG | + | tig0016220:71674-71693 | None:intergenic | 50.0% | |
ATAGTCCTTTGGCACCCGAA+TGG | - | tig0016220:71822-71841 | Msa1357950:CDS | 50.0% | |
TCGTCAAGGCGATACCATTC+GGG | + | tig0016220:71839-71858 | None:intergenic | 50.0% | |
TTCAGATGCAGCTTCACCTG+TGG | - | tig0016220:71946-71965 | Msa1357950:CDS | 50.0% | |
CGTATCACTGTCGTAGTAGC+AGG | + | tig0016220:71980-71999 | None:intergenic | 50.0% | |
CAAAGGTCTATCATGCTCCG+AGG | - | tig0016220:72002-72021 | Msa1357950:CDS | 50.0% | |
TCTATCATGCTCCGAGGTTG+TGG | - | tig0016220:72008-72027 | Msa1357950:CDS | 50.0% | |
ACACGAACGTACCACAACCT+CGG | + | tig0016220:72022-72041 | None:intergenic | 50.0% | |
! | GGGAAACGGTTTTTCTCCGT+TGG | + | tig0016220:72073-72092 | None:intergenic | 50.0% |
GGACCTTGACATATGCATCC+GGG | + | tig0016220:72093-72112 | None:intergenic | 50.0% | |
!! | GGTTGAAGATCGAGTTGGTC+CGG | - | tig0016220:72231-72250 | Msa1357950:CDS | 50.0% |
!! | GTTGAAGATCGAGTTGGTCC+GGG | - | tig0016220:72232-72251 | Msa1357950:CDS | 50.0% |
TGATCAACATCCACGGCAAC+AGG | + | tig0016220:72358-72377 | None:intergenic | 50.0% | |
GCCCCACTGCAAAACAGTTA+TGG | - | tig0016220:72479-72498 | Msa1357950:CDS | 50.0% | |
CAGTTATGGAGGCCACCAAT+TGG | - | tig0016220:72493-72512 | Msa1357950:CDS | 50.0% | |
!! | CTCGGAGTGCTGAATGCAAT+AGG | - | tig0016220:72526-72545 | Msa1357950:CDS | 50.0% |
CAACGAGCAATACACTTGGG+AGG | - | tig0016220:72666-72685 | Msa1357950:CDS | 50.0% | |
! | TCGAGTTGCATGACTGCGAA+TGG | + | tig0016220:72979-72998 | None:intergenic | 50.0% |
CAGTAAACATAGTGGCAGCG+CGG | - | tig0016220:73016-73035 | Msa1357950:CDS | 50.0% | |
ACGACTTCTTTACGAAGCGG+TGG | + | tig0016220:73057-73076 | None:intergenic | 50.0% | |
ACCGCTTCGTAAAGAAGTCG+TGG | - | tig0016220:73056-73075 | Msa1357950:CDS | 50.0% | |
!! | TGTGTGGAGGGTATCTTGGT+CGG | + | tig0016220:73497-73516 | None:intergenic | 50.0% |
ACACCCCGATGAAATGGATG+AGG | - | tig0016220:73548-73567 | Msa1357950:CDS | 50.0% | |
GTATGATCGTTTGAGGAGCG+TGG | - | tig0016220:73620-73639 | Msa1357950:CDS | 50.0% | |
! | TGTAGGTGATTTGGCTAGCC+AGG | - | tig0016220:73662-73681 | Msa1357950:CDS | 50.0% |
! | GTAGGTGATTTGGCTAGCCA+GGG | - | tig0016220:73663-73682 | Msa1357950:CDS | 50.0% |
GGATTCATGCACTGTTGAGC+TGG | - | tig0016220:73691-73710 | Msa1357950:CDS | 50.0% | |
!! | CAAATGGTGGCTGGTTTAGC+AGG | - | tig0016220:73789-73808 | Msa1357950:CDS | 50.0% |
GGCATCCCAGATTTCGAAAC+AGG | - | tig0016220:73826-73845 | Msa1357950:CDS | 50.0% | |
CGGAAGCCTGTTTCGAAATC+TGG | + | tig0016220:73835-73854 | None:intergenic | 50.0% | |
CAGTTCTTGCAGGAAGTCGA+CGG | + | tig0016220:73878-73897 | None:intergenic | 50.0% | |
TCTCGCGTAAGAGGTGAGCT+TGG | - | tig0016220:71071-71090 | Msa1357950:CDS | 55.0% | |
GTCGGCATGGACTCAACAGA+AGG | + | tig0016220:71149-71168 | None:intergenic | 55.0% | |
GCTGAAGTCCATGGACCTAC+GGG | - | tig0016220:71179-71198 | Msa1357950:intron | 55.0% | |
ACAAGTCCGTTTCTCGGTGG+AGG | - | tig0016220:71443-71462 | Msa1357950:CDS | 55.0% | |
TCCGTTTCTCGGTGGAGGAA+GGG | - | tig0016220:71448-71467 | Msa1357950:CDS | 55.0% | |
ACCCTTCCTCCACCGAGAAA+CGG | + | tig0016220:71452-71471 | None:intergenic | 55.0% | |
GGCTCGTGAGCTTCCTTCTA+TGG | - | tig0016220:71562-71581 | Msa1357950:CDS | 55.0% | |
TCAGAATCCGGAGTGGCATC+AGG | - | tig0016220:71664-71683 | Msa1357950:CDS | 55.0% | |
GGTGCCAAAGGACTATCTGG+TGG | + | tig0016220:71818-71837 | None:intergenic | 55.0% | |
TCGGGTGCCAAAGGACTATC+TGG | + | tig0016220:71821-71840 | None:intergenic | 55.0% | |
CGATACCATTCGGGTGCCAA+AGG | + | tig0016220:71830-71849 | None:intergenic | 55.0% | |
TACCATACCGCTGAACGCTG+TGG | - | tig0016220:72279-72298 | Msa1357950:CDS | 55.0% | |
CTTGGAAAAGCCTGTTGCCG+TGG | - | tig0016220:72345-72364 | Msa1357950:CDS | 55.0% | |
CAGCTACGGCTATGTCTGGA+TGG | - | tig0016220:72409-72428 | Msa1357950:CDS | 55.0% | |
CTACGGCTATGTCTGGATGG+AGG | - | tig0016220:72412-72431 | Msa1357950:CDS | 55.0% | |
GACACCTACTGTGAGGACTG+TGG | + | tig0016220:72704-72723 | None:intergenic | 55.0% | |
! | ATTTGGCTAGCCAGGGTGAG+AGG | - | tig0016220:73670-73689 | Msa1357950:CDS | 55.0% |
GTGCATGAATCCTCTCACCC+TGG | + | tig0016220:73683-73702 | None:intergenic | 55.0% | |
GTCCGTTTCTCGGTGGAGGA+AGG | - | tig0016220:71447-71466 | Msa1357950:CDS | 60.0% | |
CTCGGTGGAGGAAGGGTTGT+TGG | - | tig0016220:71455-71474 | Msa1357950:CDS | 60.0% | |
GGTGGAGGAAGGGTTGTTGG+CGG | - | tig0016220:71458-71477 | Msa1357950:CDS | 60.0% | |
CTCCACAGCGTTCAGCGGTA+TGG | + | tig0016220:72284-72303 | None:intergenic | 60.0% | |
TACCGCTGAACGCTGTGGAG+AGG | - | tig0016220:72284-72303 | Msa1357950:CDS | 60.0% | |
CCTACTGTGAGGACTGTGGC+AGG | + | tig0016220:72700-72719 | None:intergenic | 60.0% | |
CCTGCCACAGTCCTCACAGT+AGG | - | tig0016220:72697-72716 | Msa1357950:CDS | 60.0% | |
AACATAGTGGCAGCGCGGCT+CGG | - | tig0016220:73021-73040 | Msa1357950:CDS | 60.0% | |
ATGGAGCATGCGCCGTAGCA+AGG | - | tig0016220:73107-73126 | Msa1357950:CDS | 60.0% | |
! | GATCGTTTGAGGAGCGTGGC+TGG | - | tig0016220:73624-73643 | Msa1357950:CDS | 60.0% |
GTAGCAGGCGTGCTGTCCAC+AGG | + | tig0016220:71965-71984 | None:intergenic | 65.0% | |
CGCCTCTCCACAGCGTTCAG+CGG | + | tig0016220:72289-72308 | None:intergenic | 65.0% | |
! | GAACGCTGTGGAGAGGCGTG+CGG | - | tig0016220:72291-72310 | Msa1357950:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0016220 | gene | 70723 | 73911 | 70723 | ID=Msa1357950;Name=Msa1357950 |
tig0016220 | mRNA | 70723 | 73911 | 70723 | ID=Msa1357950-mRNA-1;Parent=Msa1357950;Name=Msa1357950-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|1007 |
tig0016220 | exon | 71309 | 73911 | 71309 | ID=Msa1357950-mRNA-1:exon:10544;Parent=Msa1357950-mRNA-1 |
tig0016220 | exon | 70723 | 71143 | 70723 | ID=Msa1357950-mRNA-1:exon:10543;Parent=Msa1357950-mRNA-1 |
tig0016220 | CDS | 71309 | 73911 | 71309 | ID=Msa1357950-mRNA-1:cds;Parent=Msa1357950-mRNA-1 |
tig0016220 | CDS | 70723 | 71143 | 70723 | ID=Msa1357950-mRNA-1:cds;Parent=Msa1357950-mRNA-1 |
Gene Sequence |
Protein sequence |