Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357950 | XP_024640338.1 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2078 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357950 | sp|Q9M2R0|FTIP3_ARATH | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357950 | G7KC44 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2078 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1357950 | Msa1358170 | 0.858076 | 1.055546e-62 | -8.615850e-47 |
| Msa1357950 | Msa1411480 | 0.994701 | 1.847052e-209 | -8.615850e-47 |
| Msa0689180 | Msa1357950 | 0.858472 | 8.046246e-63 | -8.615850e-47 |
| Msa0753230 | Msa1357950 | 0.973903 | 3.180423e-137 | -8.615850e-47 |
| Msa0795490 | Msa1357950 | 0.950831 | 7.287874e-109 | -8.615850e-47 |
| Msa0147680 | Msa1357950 | 0.818529 | 1.869656e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357950 | MtrunA17_Chr5g0397601 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2078 |
| Msa1357950 | MtrunA17_Chr8g0349231 | 63.878 | 1016 | 345 | 11 | 1 | 1007 | 1 | 1003 | 0.0 | 1344 |
| Msa1357950 | MtrunA17_Chr7g0258331 | 69.191 | 779 | 227 | 6 | 233 | 1007 | 6 | 775 | 0.0 | 1156 |
| Msa1357950 | MtrunA17_Chr1g0174761 | 68.726 | 777 | 233 | 4 | 233 | 1007 | 6 | 774 | 0.0 | 1138 |
| Msa1357950 | MtrunA17_Chr4g0033151 | 67.788 | 773 | 238 | 4 | 235 | 1007 | 9 | 770 | 0.0 | 1123 |
| Msa1357950 | MtrunA17_Chr1g0174581 | 62.389 | 787 | 279 | 6 | 235 | 1007 | 14 | 797 | 0.0 | 1065 |
| Msa1357950 | MtrunA17_Chr4g0010751 | 64.465 | 757 | 257 | 6 | 259 | 1007 | 442 | 1194 | 0.0 | 1055 |
| Msa1357950 | MtrunA17_Chr4g0010751 | 32.673 | 202 | 135 | 1 | 4 | 204 | 1 | 202 | 2.85e-25 | 113 |
| Msa1357950 | MtrunA17_Chr3g0087501 | 62.326 | 791 | 277 | 9 | 235 | 1007 | 35 | 822 | 0.0 | 1051 |
| Msa1357950 | MtrunA17_Chr4g0014711 | 62.404 | 782 | 278 | 9 | 232 | 1007 | 273 | 1044 | 0.0 | 1026 |
| Msa1357950 | MtrunA17_Chr4g0014711 | 37.121 | 132 | 74 | 3 | 5 | 133 | 3 | 128 | 3.17e-16 | 84.0 |
| Msa1357950 | MtrunA17_Chr7g0247271 | 64.358 | 693 | 229 | 6 | 326 | 1007 | 281 | 966 | 0.0 | 935 |
| Msa1357950 | MtrunA17_Chr7g0247271 | 31.481 | 594 | 324 | 20 | 1 | 527 | 78 | 655 | 2.24e-59 | 220 |
| Msa1357950 | MtrunA17_Chr4g0060191 | 51.643 | 761 | 325 | 12 | 265 | 1007 | 303 | 1038 | 0.0 | 788 |
| Msa1357950 | MtrunA17_Chr4g0060191 | 48.485 | 132 | 64 | 1 | 5 | 132 | 18 | 149 | 1.19e-29 | 127 |
| Msa1357950 | MtrunA17_Chr4g0028371 | 50.444 | 789 | 360 | 10 | 232 | 1007 | 13 | 783 | 0.0 | 787 |
| Msa1357950 | MtrunA17_Chr6g0461151 | 50.262 | 764 | 340 | 13 | 263 | 1007 | 284 | 1026 | 0.0 | 774 |
| Msa1357950 | MtrunA17_Chr6g0461151 | 39.535 | 129 | 76 | 1 | 5 | 131 | 6 | 134 | 2.74e-22 | 103 |
| Msa1357950 | MtrunA17_Chr6g0460791 | 49.017 | 763 | 342 | 13 | 265 | 1007 | 274 | 1009 | 0.0 | 751 |
| Msa1357950 | MtrunA17_Chr6g0460791 | 44.186 | 129 | 71 | 1 | 5 | 132 | 11 | 139 | 1.57e-28 | 124 |
| Msa1357950 | MtrunA17_Chr4g0035961 | 48.092 | 786 | 326 | 11 | 235 | 1007 | 16 | 732 | 0.0 | 750 |
| Msa1357950 | MtrunA17_Chr1g0151051 | 41.935 | 806 | 431 | 14 | 221 | 1007 | 11 | 798 | 0.0 | 624 |
| Msa1357950 | MtrunA17_Chr5g0447321 | 38.462 | 793 | 442 | 15 | 230 | 1007 | 2 | 763 | 0.0 | 551 |
| Msa1357950 | MtrunA17_Chr4g0010641 | 60.769 | 130 | 49 | 1 | 877 | 1006 | 1 | 128 | 8.50e-49 | 169 |
| Msa1357950 | MtrunA17_Chr6g0461171 | 40.310 | 129 | 75 | 1 | 5 | 131 | 6 | 134 | 8.21e-26 | 106 |
| Msa1357950 | MtrunA17_Chr4g0010701 | 44.231 | 104 | 36 | 2 | 880 | 983 | 16 | 97 | 2.66e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357950 | AT4G11610.2 | 75.538 | 1022 | 218 | 8 | 1 | 1007 | 3 | 1007 | 0.0 | 1623 |
| Msa1357950 | AT4G11610.1 | 75.342 | 1022 | 224 | 8 | 1 | 1007 | 3 | 1011 | 0.0 | 1621 |
| Msa1357950 | AT4G11610.3 | 77.093 | 860 | 179 | 6 | 163 | 1007 | 18 | 874 | 0.0 | 1404 |
| Msa1357950 | AT4G00700.1 | 56.500 | 1023 | 412 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1186 |
| Msa1357950 | AT4G00700.2 | 56.500 | 1023 | 412 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1186 |
| Msa1357950 | AT3G57880.4 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
| Msa1357950 | AT3G57880.2 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
| Msa1357950 | AT3G57880.3 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
| Msa1357950 | AT3G57880.1 | 70.142 | 777 | 221 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
| Msa1357950 | AT5G12970.1 | 69.716 | 776 | 223 | 4 | 232 | 1007 | 6 | 769 | 0.0 | 1151 |
| Msa1357950 | AT1G51570.1 | 68.935 | 779 | 230 | 5 | 233 | 1007 | 6 | 776 | 0.0 | 1149 |
| Msa1357950 | AT1G22610.1 | 55.029 | 1034 | 427 | 14 | 5 | 1007 | 3 | 1029 | 0.0 | 1138 |
| Msa1357950 | AT5G48060.1 | 53.104 | 1047 | 431 | 14 | 5 | 1007 | 6 | 1036 | 0.0 | 1105 |
| Msa1357950 | AT3G61300.1 | 53.682 | 1032 | 392 | 22 | 1 | 1007 | 2 | 972 | 0.0 | 1101 |
| Msa1357950 | AT5G06850.1 | 62.468 | 786 | 279 | 6 | 235 | 1007 | 12 | 794 | 0.0 | 1080 |
| Msa1357950 | AT1G04150.1 | 51.694 | 1033 | 441 | 18 | 3 | 1007 | 10 | 1012 | 0.0 | 1033 |
| Msa1357950 | AT1G74720.1 | 43.538 | 1091 | 507 | 21 | 2 | 1007 | 15 | 1081 | 0.0 | 882 |
| Msa1357950 | AT4G20080.1 | 54.685 | 779 | 327 | 10 | 236 | 1007 | 15 | 774 | 0.0 | 870 |
| Msa1357950 | AT5G17980.1 | 49.472 | 758 | 348 | 12 | 263 | 1007 | 314 | 1049 | 0.0 | 774 |
| Msa1357950 | AT5G17980.1 | 39.716 | 141 | 79 | 3 | 5 | 139 | 6 | 146 | 1.29e-22 | 105 |
| Msa1357950 | AT3G03680.1 | 49.613 | 776 | 326 | 20 | 265 | 1007 | 274 | 1017 | 0.0 | 762 |
| Msa1357950 | AT3G03680.1 | 40.625 | 128 | 76 | 0 | 5 | 132 | 8 | 135 | 7.66e-26 | 115 |
| Msa1357950 | AT3G61720.1 | 38.300 | 812 | 439 | 22 | 235 | 1007 | 7 | 795 | 6.38e-160 | 491 |
| Msa1357950 | AT5G03435.1 | 40.385 | 780 | 404 | 25 | 235 | 1000 | 7 | 739 | 1.39e-156 | 481 |
| Msa1357950 | AT5G03435.2 | 42.586 | 580 | 296 | 16 | 235 | 807 | 7 | 556 | 3.10e-129 | 403 |
| Msa1357950 | AT5G44760.1 | 47.044 | 406 | 164 | 10 | 235 | 635 | 5 | 364 | 1.86e-108 | 345 |
| Msa1357950 | AT1G03370.2 | 36.885 | 122 | 73 | 2 | 274 | 393 | 3 | 122 | 1.61e-14 | 79.0 |
| Msa1357950 | AT1G03370.1 | 36.885 | 122 | 73 | 2 | 274 | 393 | 3 | 122 | 2.03e-14 | 78.6 |
Find 232 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAACAAAGACTTGAAAAT+TGG | 0.180427 | tig0016220:-71855 | Msa1357950:CDS |
| CCCAACTGGTGTTAAGAAAA+TGG | 0.211222 | tig0016220:-71757 | Msa1357950:CDS |
| AGAAGAGCCTTCTCCATCTT+TGG | 0.233433 | tig0016220:+73837 | None:intergenic |
| TCAGCACTTGGTTTCCTATC+TGG | 0.237936 | tig0016220:+72501 | None:intergenic |
| CTATCTGGTGGAACTCTTAA+AGG | 0.240838 | tig0016220:+72809 | None:intergenic |
| ATTATGATCAACTTAAAGTT+AGG | 0.248856 | tig0016220:-73892 | Msa1357950:CDS |
| GGCTCGTGAGCTTCCTTCTA+TGG | 0.253047 | tig0016220:-73050 | Msa1357950:CDS |
| CGGAAGCCTGTTTCGAAATC+TGG | 0.258205 | tig0016220:+70780 | None:intergenic |
| ACTAACTCAAGTTCATTTCT+TGG | 0.266395 | tig0016220:-73649 | Msa1357950:CDS |
| GTGTATTGCTCGTTGTATTT+TGG | 0.268384 | tig0016220:+71954 | None:intergenic |
| TAATGGTTGTTCGAAACTTT+TGG | 0.275614 | tig0016220:+73785 | None:intergenic |
| TCTCATGTTGGTTTGCTTCC+CGG | 0.299961 | tig0016220:-71367 | Msa1357950:CDS |
| TTTCTGTTTGTTAGCTGCTT+TGG | 0.314831 | tig0016220:-70866 | Msa1357950:CDS |
| TGCCGTTGATGGTTTGTGTT+AGG | 0.316788 | tig0016220:+73346 | None:intergenic |
| CTCGGTGGAGGAAGGGTTGT+TGG | 0.318759 | tig0016220:-73157 | Msa1357950:CDS |
| TGAACTTGAGTTAGTAGCTT+TGG | 0.320839 | tig0016220:+73657 | None:intergenic |
| GTGTGTTTGCAGTTGGAAAA+TGG | 0.332879 | tig0016220:-71449 | Msa1357950:CDS |
| ATCGTCAAGGCGATACCATT+CGG | 0.343035 | tig0016220:+72775 | None:intergenic |
| TTTCTCTACCTATTCTTGAT+AGG | 0.343636 | tig0016220:-71324 | Msa1357950:CDS |
| CTGATTCTTATCATAGTGTT+TGG | 0.343905 | tig0016220:+72967 | None:intergenic |
| AAGAAAGGGGAGAAAGTTAA+AGG | 0.345361 | tig0016220:-72752 | Msa1357950:CDS |
| AAAAGGATCTTAATCCTGTT+TGG | 0.345946 | tig0016220:-73759 | Msa1357950:CDS |
| TGATAGGTGTATGGAACTTC+AGG | 0.347349 | tig0016220:-71308 | Msa1357950:intron |
| GTTGATGCTGATGCCGTTGA+TGG | 0.350294 | tig0016220:+73335 | None:intergenic |
| TGAAGATCATGTAATACTTT+CGG | 0.351594 | tig0016220:-72402 | Msa1357950:CDS |
| TGAACAAGGACTGTTGTAAT+AGG | 0.354570 | tig0016220:+71399 | None:intergenic |
| CTTCCTTCTATGGATCTTAC+CGG | 0.373034 | tig0016220:-73040 | Msa1357950:CDS |
| CAGATGTTGACTCACATCTA+TGG | 0.373205 | tig0016220:-71524 | Msa1357950:CDS |
| GGCATCCCAGATTTCGAAAC+AGG | 0.373780 | tig0016220:-70786 | Msa1357950:CDS |
| TTGCTTGTTCTTCACCCAAC+TGG | 0.374868 | tig0016220:-71771 | Msa1357950:CDS |
| TCGGGTGCCAAAGGACTATC+TGG | 0.383261 | tig0016220:+72794 | None:intergenic |
| ACAAACGGTTGTAGGTGATT+TGG | 0.383411 | tig0016220:-70959 | Msa1357950:CDS |
| GAAGAGCCTTCTCCATCTTT+GGG | 0.384950 | tig0016220:+73838 | None:intergenic |
| TTCCCAAATCAGTGGTGAAA+AGG | 0.392570 | tig0016220:-71880 | Msa1357950:CDS |
| CAAATGGTGGCTGGTTTAGC+AGG | 0.392665 | tig0016220:-70823 | Msa1357950:CDS |
| CCATTTGTTGAGGTGAGAAT+TGG | 0.401775 | tig0016220:-73007 | Msa1357950:CDS |
| ATAGAATCATTCATTCTAGA+TGG | 0.401919 | tig0016220:-72295 | Msa1357950:CDS |
| TCGTCAAGGCGATACCATTC+GGG | 0.407136 | tig0016220:+72776 | None:intergenic |
| TAGCAAAATACGGTCACAAA+TGG | 0.411100 | tig0016220:-72010 | Msa1357950:CDS |
| TGTAGGTGATTTGGCTAGCC+AGG | 0.412061 | tig0016220:-70950 | Msa1357950:CDS |
| CCAATTCTCACCTCAACAAA+TGG | 0.417160 | tig0016220:+73007 | None:intergenic |
| TGATCAACATCCACGGCAAC+AGG | 0.420405 | tig0016220:+72257 | None:intergenic |
| AAAGATCTTCATTCCATTGT+GGG | 0.420444 | tig0016220:+72447 | None:intergenic |
| TACCGCATTCTTACAAGGTC+AGG | 0.427894 | tig0016220:+71012 | None:intergenic |
| ATGGACTCAACAGAAGGATT+TGG | 0.428137 | tig0016220:+73472 | None:intergenic |
| GTGAGTTGATGCTAGCTGTT+TGG | 0.429438 | tig0016220:-72730 | Msa1357950:CDS |
| TTATGATCAACTTAAAGTTA+GGG | 0.431458 | tig0016220:-73891 | Msa1357950:CDS |
| AATTCCTCATCCATTTCATC+GGG | 0.432095 | tig0016220:+71060 | None:intergenic |
| AACATACTATCAGTTCTTGC+AGG | 0.433599 | tig0016220:+70727 | None:intergenic |
| TCATGTGTTGTTTCTCATGT+TGG | 0.437544 | tig0016220:-71379 | Msa1357950:CDS |
| TCAGAATCCGGAGTGGCATC+AGG | 0.438503 | tig0016220:-72948 | Msa1357950:CDS |
| TCTTTAAGTGCAAAATCAAC+CGG | 0.439305 | tig0016220:+73193 | None:intergenic |
| CCGGGAAAAGATGAGATCAT+TGG | 0.439731 | tig0016220:-72362 | Msa1357950:CDS |
| AAAGAAACAAGTCCGTTTCT+CGG | 0.443107 | tig0016220:-73175 | Msa1357950:CDS |
| TCGAACAACCATTAAAGAAA+AGG | 0.443124 | tig0016220:-73776 | Msa1357950:CDS |
| CTCAGTTACATCACTACAAC+CGG | 0.443547 | tig0016220:-73212 | Msa1357950:CDS |
| GGTTGAAGATCGAGTTGGTC+CGG | 0.444254 | tig0016220:-72381 | Msa1357950:CDS |
| CGCATATCGACTCTTGAAAC+AGG | 0.446486 | tig0016220:-71819 | Msa1357950:CDS |
| TTCATGTGTGGAGGGTATCT+TGG | 0.447757 | tig0016220:+71114 | None:intergenic |
| ACAACAAAGACTTGAAAATT+GGG | 0.452516 | tig0016220:-71854 | Msa1357950:CDS |
| ACCTATTCTTGATAGGTGTA+TGG | 0.457302 | tig0016220:-71317 | Msa1357950:CDS |
| AATTCAGCTACGGCTATGTC+TGG | 0.461073 | tig0016220:-72207 | Msa1357950:CDS |
| CCGAGTTCTAAAACACCAAT+TGG | 0.462500 | tig0016220:+72104 | None:intergenic |
| GCCCCACTGCAAAACAGTTA+TGG | 0.464071 | tig0016220:-72133 | Msa1357950:CDS |
| CCAACTGGTGTTAAGAAAAT+GGG | 0.464187 | tig0016220:-71756 | Msa1357950:CDS |
| GTTGAAGATCGAGTTGGTCC+GGG | 0.464534 | tig0016220:-72380 | Msa1357950:CDS |
| TAGAAGCTCTCATTCCAAAC+AGG | 0.467298 | tig0016220:+73745 | None:intergenic |
| AAGAGTGAGATAGTGAAGAT+TGG | 0.467768 | tig0016220:+73702 | None:intergenic |
| GGATTCATGCACTGTTGAGC+TGG | 0.468052 | tig0016220:-70921 | Msa1357950:CDS |
| CTCGGAGTGCTGAATGCAAT+AGG | 0.474307 | tig0016220:-72086 | Msa1357950:CDS |
| CGGGAAAAGATGAGATCATT+GGG | 0.475103 | tig0016220:-72361 | Msa1357950:CDS |
| TCTATCATGCTCCGAGGTTG+TGG | 0.475877 | tig0016220:-72604 | Msa1357950:CDS |
| ACCCTTCCTCCACCGAGAAA+CGG | 0.478302 | tig0016220:+73163 | None:intergenic |
| CTTGGCAAAGTTAGCCTCAC+AGG | 0.478373 | tig0016220:-73631 | Msa1357950:CDS |
| TCCCAAATCAGTGGTGAAAA+GGG | 0.479687 | tig0016220:-71879 | Msa1357950:CDS |
| GCCGTTGATGGTTTGTGTTA+GGG | 0.479912 | tig0016220:+73347 | None:intergenic |
| TGACATATGCATCCGGGAAA+CGG | 0.482033 | tig0016220:+72528 | None:intergenic |
| TGCTGAAGTCCATGGACCTA+CGG | 0.483695 | tig0016220:-73434 | Msa1357950:CDS |
| AGCATGATTATTTGTCGGCA+TGG | 0.485124 | tig0016220:+73453 | None:intergenic |
| GCATATGTCAAGGTCCAGAT+AGG | 0.486634 | tig0016220:-72515 | Msa1357950:CDS |
| AACAGAAGGATTTGGAATTG+AGG | 0.489461 | tig0016220:+73480 | None:intergenic |
| CTCCACAGCGTTCAGCGGTA+TGG | 0.490783 | tig0016220:+72331 | None:intergenic |
| GTCCGTTTCTCGGTGGAGGA+AGG | 0.491607 | tig0016220:-73165 | Msa1357950:CDS |
| ACATATTGTGTAGCAAAATA+CGG | 0.491890 | tig0016220:-72020 | Msa1357950:CDS |
| TGTAGTACACCCCGATGAAA+TGG | 0.494237 | tig0016220:-71070 | Msa1357950:CDS |
| TGGACCTTGACATATGCATC+CGG | 0.494944 | tig0016220:+72521 | None:intergenic |
| AGTTCCACCAGATAGTCCTT+TGG | 0.496430 | tig0016220:-72801 | Msa1357950:CDS |
| GGTAGAATACAAACGGTTGT+AGG | 0.496800 | tig0016220:-70967 | Msa1357950:CDS |
| GTGAGATAGTGAAGATTGGA+AGG | 0.498614 | tig0016220:+73706 | None:intergenic |
| GATCGTTTGAGGAGCGTGGC+TGG | 0.499227 | tig0016220:-70988 | Msa1357950:CDS |
| CTGCCACTATGTTTACTGCT+TGG | 0.501177 | tig0016220:+71601 | None:intergenic |
| ACTTCAGCATGATTATTTGT+CGG | 0.502778 | tig0016220:+73448 | None:intergenic |
| AAATTCCTCATCCATTTCAT+CGG | 0.503321 | tig0016220:+71059 | None:intergenic |
| CCTACGGGTTCAATGATGAA+TGG | 0.504774 | tig0016220:-73418 | Msa1357950:CDS |
| AGTATTACATGATCTTCAAA+AGG | 0.505539 | tig0016220:+72407 | None:intergenic |
| TCATTCTAGATGGTTCAACT+TGG | 0.507484 | tig0016220:-72285 | Msa1357950:CDS |
| CGTATCACTGTCGTAGTAGC+AGG | 0.507663 | tig0016220:+72635 | None:intergenic |
| GCTGAAGTCCATGGACCTAC+GGG | 0.510349 | tig0016220:-73433 | Msa1357950:CDS |
| ATCGCCTTGACGATAAGAAA+GGG | 0.511259 | tig0016220:-72766 | Msa1357950:CDS |
| AACATAGTGGCAGCGCGGCT+CGG | 0.511333 | tig0016220:-71591 | Msa1357950:CDS |
| GGAAGCCTGTTTCGAAATCT+GGG | 0.513817 | tig0016220:+70781 | None:intergenic |
| TTTGCAGTTGGAAAATGGTT+AGG | 0.514024 | tig0016220:-71444 | Msa1357950:CDS |
| TGTACTAGAAGTTGTGATCA+AGG | 0.515018 | tig0016220:-72891 | Msa1357950:CDS |
| AAAAGATCTTCATTCCATTG+TGG | 0.517456 | tig0016220:+72446 | None:intergenic |
| CAGTTATGGAGGCCACCAAT+TGG | 0.517888 | tig0016220:-72119 | Msa1357950:CDS |
| GAAAGAAGTTTGCCTTGCTA+CGG | 0.518974 | tig0016220:+71493 | None:intergenic |
| TTTGTATGTCAGGGTCGTTA+AGG | 0.519023 | tig0016220:-73071 | Msa1357950:CDS |
| AAACCAGCCACCATTTGAAA+AGG | 0.520236 | tig0016220:+70829 | None:intergenic |
| ACAAGTCCGTTTCTCGGTGG+AGG | 0.522181 | tig0016220:-73169 | Msa1357950:CDS |
| TCCCGAAAATGCATTACGTT+AGG | 0.522411 | tig0016220:-71659 | Msa1357950:CDS |
| TGTACTAGCTTCATAGGTTG+TGG | 0.523049 | tig0016220:+73241 | None:intergenic |
| TGCATGTGTACTAGCTTCAT+AGG | 0.523340 | tig0016220:+73235 | None:intergenic |
| AGCAAAATACGGTCACAAAT+GGG | 0.523407 | tig0016220:-72009 | Msa1357950:CDS |
| CACAATCTACTACCCAAAGA+TGG | 0.523857 | tig0016220:-73850 | Msa1357950:CDS |
| TTTGTAGAACTTTACTTCGA+CGG | 0.525442 | tig0016220:-73808 | Msa1357950:CDS |
| CTCCCGGTAAGATCCATAGA+AGG | 0.525748 | tig0016220:+73037 | None:intergenic |
| CTATGATAAGAATCAGAATC+CGG | 0.528818 | tig0016220:-72960 | Msa1357950:CDS |
| TCCGTTTCTCGGTGGAGGAA+GGG | 0.529722 | tig0016220:-73164 | Msa1357950:CDS |
| TAGTAGCTTTGGAATGGCAG+TGG | 0.529952 | tig0016220:+73668 | None:intergenic |
| TCTCGCGTAAGAGGTGAGCT+TGG | 0.536637 | tig0016220:-73541 | Msa1357950:CDS |
| ATTTCATCAGCTTCATACTT+CGG | 0.537653 | tig0016220:+73277 | None:intergenic |
| GAATGCGGTATGATCGTTTG+AGG | 0.538021 | tig0016220:-70999 | Msa1357950:CDS |
| TTGATGCTAGCTGTTTGGAT+TGG | 0.541583 | tig0016220:-72725 | Msa1357950:CDS |
| GAGTCTTGATCCATTTGTTG+AGG | 0.542333 | tig0016220:-73017 | Msa1357950:CDS |
| TACATGATCTTCAAAAGGCT+CGG | 0.542481 | tig0016220:+72412 | None:intergenic |
| TCCATACACCTATCAAGAAT+AGG | 0.544412 | tig0016220:+71316 | None:intergenic |
| TCTCCCCTTTCTTATCGTCA+AGG | 0.547579 | tig0016220:+72762 | None:intergenic |
| TCATTGAACCCGTAGGTCCA+TGG | 0.548824 | tig0016220:+73425 | None:intergenic |
| TATCGCCTTGACGATAAGAA+AGG | 0.548988 | tig0016220:-72767 | Msa1357950:CDS |
| GGTGGAGGAAGGGTTGTTGG+CGG | 0.552425 | tig0016220:-73154 | Msa1357950:CDS |
| AAGTTAGGGGTAGATGTGGT+TGG | 0.552972 | tig0016220:-73877 | Msa1357950:CDS |
| AATAATCATGCTGAAGTCCA+TGG | 0.553116 | tig0016220:-73442 | Msa1357950:CDS |
| TTGAGTTAGTAGCTTTGGAA+TGG | 0.553431 | tig0016220:+73662 | None:intergenic |
| AAGAAGTTGATCGGTGCAGA+CGG | 0.553790 | tig0016220:+70760 | None:intergenic |
| GATCATACCGCATTCTTACA+AGG | 0.554571 | tig0016220:+71007 | None:intergenic |
| GTAGGTGATTTGGCTAGCCA+GGG | 0.554831 | tig0016220:-70949 | Msa1357950:CDS |
| TGTGGGTTTAGAGTTCTAGC+AGG | 0.559920 | tig0016220:+72464 | None:intergenic |
| GTGTAGGCAAAATCAACTCC+GGG | 0.562576 | tig0016220:+71349 | None:intergenic |
| ATGGAGCATGCGCCGTAGCA+AGG | 0.566672 | tig0016220:-71505 | Msa1357950:CDS |
| AACTAGATCATATGTACTTG+CGG | 0.568364 | tig0016220:+73108 | None:intergenic |
| TTCTTGTGTTCATGTGTGGA+GGG | 0.569126 | tig0016220:+71106 | None:intergenic |
| ATTCTTGTGTTCATGTGTGG+AGG | 0.569293 | tig0016220:+71105 | None:intergenic |
| AAGACAACTGCATCAGCTTG+AGG | 0.569540 | tig0016220:+73595 | None:intergenic |
| AGTGTAGGCAAAATCAACTC+CGG | 0.570441 | tig0016220:+71348 | None:intergenic |
| CGCCTCTCCACAGCGTTCAG+CGG | 0.570587 | tig0016220:+72326 | None:intergenic |
| ATTTGGCTAGCCAGGGTGAG+AGG | 0.571757 | tig0016220:-70942 | Msa1357950:CDS |
| CAGCATCAACAACACTCCAC+TGG | 0.572183 | tig0016220:-73322 | Msa1357950:CDS |
| CTTAAAGTTAGGGGTAGATG+TGG | 0.572186 | tig0016220:-73881 | Msa1357950:CDS |
| CTTTCGGTTGAAGATCGAGT+TGG | 0.574501 | tig0016220:-72386 | Msa1357950:CDS |
| AGACAACTGCATCAGCTTGA+GGG | 0.574535 | tig0016220:+73596 | None:intergenic |
| AACAAATGGATCAAGACTCC+CGG | 0.576070 | tig0016220:+73021 | None:intergenic |
| CGTGGCTGGTAGAATACAAA+CGG | 0.577843 | tig0016220:-70974 | Msa1357950:CDS |
| TTCCTTCTATGGATCTTACC+GGG | 0.579035 | tig0016220:-73039 | Msa1357950:CDS |
| ACTATCCGTTGGAAAAGCGC+GGG | 0.579782 | tig0016220:-73570 | Msa1357950:CDS |
| CCTACTGTGAGGACTGTGGC+AGG | 0.580485 | tig0016220:+71915 | None:intergenic |
| CACTATCCGTTGGAAAAGCG+CGG | 0.582031 | tig0016220:-73571 | Msa1357950:CDS |
| TAGCAGGTTTCTATTTCATG+AGG | 0.582086 | tig0016220:-70807 | Msa1357950:CDS |
| CGATACCATTCGGGTGCCAA+AGG | 0.582226 | tig0016220:+72785 | None:intergenic |
| CTACTACCCAAAGATGGAGA+AGG | 0.583168 | tig0016220:-73844 | Msa1357950:CDS |
| AGTTGTCTTGCACTATCCGT+TGG | 0.586747 | tig0016220:-73581 | Msa1357950:CDS |
| CAGTTCTTGCAGGAAGTCGA+CGG | 0.588288 | tig0016220:+70737 | None:intergenic |
| GTCGGCATGGACTCAACAGA+AGG | 0.588951 | tig0016220:+73466 | None:intergenic |
| GAGATTCTTGTGTTCATGTG+TGG | 0.591639 | tig0016220:+71102 | None:intergenic |
| TTCAGATGCAGCTTCACCTG+TGG | 0.591854 | tig0016220:-72666 | Msa1357950:CDS |
| TACGACAGTGATACGTTCAA+AGG | 0.595585 | tig0016220:-72627 | Msa1357950:CDS |
| GACTCCACCCAATGAAAACA+AGG | 0.596227 | tig0016220:-72064 | Msa1357950:CDS |
| TCGAGTTGCATGACTGCGAA+TGG | 0.597451 | tig0016220:+71636 | None:intergenic |
| CTTGGAAAAGCCTGTTGCCG+TGG | 0.598251 | tig0016220:-72267 | Msa1357950:CDS |
| ACCGCTTCGTAAAGAAGTCG+TGG | 0.599851 | tig0016220:-71556 | Msa1357950:CDS |
| AGTTCTAAAACACCAATTGG+TGG | 0.601566 | tig0016220:+72107 | None:intergenic |
| GTGCATGAATCCTCTCACCC+TGG | 0.601936 | tig0016220:+70932 | None:intergenic |
| TTGCAAGCAGAATTCAGCTA+CGG | 0.601937 | tig0016220:-72217 | Msa1357950:CDS |
| GTACATATGATCTAGTTGAA+AGG | 0.603113 | tig0016220:-73102 | Msa1357950:CDS |
| TCCCTAACACAAACCATCAA+CGG | 0.603684 | tig0016220:-73348 | Msa1357950:CDS |
| CAGCTACGGCTATGTCTGGA+TGG | 0.603841 | tig0016220:-72203 | Msa1357950:CDS |
| GAAAATGGGAGAACTTCACT+TGG | 0.605162 | tig0016220:-71742 | Msa1357950:CDS |
| ACACCCCGATGAAATGGATG+AGG | 0.606414 | tig0016220:-71064 | Msa1357950:CDS |
| TATGATCAACTTAAAGTTAG+GGG | 0.607138 | tig0016220:-73890 | Msa1357950:CDS |
| TGTGTGGAGGGTATCTTGGT+CGG | 0.608323 | tig0016220:+71118 | None:intergenic |
| GGACCTTGACATATGCATCC+GGG | 0.608916 | tig0016220:+72522 | None:intergenic |
| GTCACAAATGGGTCAGAACA+AGG | 0.610662 | tig0016220:-71998 | Msa1357950:CDS |
| ATGAAAACAAGGGATGGTAG+AGG | 0.612015 | tig0016220:-72053 | Msa1357950:CDS |
| CTAGAACTCTAAACCCACAA+TGG | 0.614323 | tig0016220:-72460 | Msa1357950:CDS |
| CAAAGACTTGAAAATTGGGA+AGG | 0.616941 | tig0016220:-71850 | Msa1357950:CDS |
| CACCCAATGAAAACAAGGGA+TGG | 0.618631 | tig0016220:-72059 | Msa1357950:CDS |
| CATGAACACAAGAATCTCAC+AGG | 0.619367 | tig0016220:-71097 | Msa1357950:CDS |
| GTTGGGTGAAGAACAAGCAA+TGG | 0.619420 | tig0016220:+71774 | None:intergenic |
| ACGACTTCTTTACGAAGCGG+TGG | 0.619488 | tig0016220:+71558 | None:intergenic |
| ATAGTCCTTTGGCACCCGAA+TGG | 0.620871 | tig0016220:-72790 | Msa1357950:CDS |
| TACCGCTGAACGCTGTGGAG+AGG | 0.622911 | tig0016220:-72328 | Msa1357950:CDS |
| TCCACGACTTCTTTACGAAG+CGG | 0.627157 | tig0016220:+71555 | None:intergenic |
| CCTGCCACAGTCCTCACAGT+AGG | 0.628716 | tig0016220:-71915 | Msa1357950:CDS |
| GTGAGTATCTGCATATCCAG+TGG | 0.628850 | tig0016220:+73306 | None:intergenic |
| TTTGACAATTCCCAAATCAG+TGG | 0.630492 | tig0016220:-71888 | Msa1357950:CDS |
| ATCCTGACCTTGTAAGAATG+CGG | 0.634955 | tig0016220:-71014 | Msa1357950:CDS |
| AATACAACGAGCAATACACT+TGG | 0.635555 | tig0016220:-71950 | Msa1357950:CDS |
| AGCACAAGACTTGATTCCAA+CGG | 0.636163 | tig0016220:-72558 | Msa1357950:CDS |
| TACCATACCGCTGAACGCTG+TGG | 0.636602 | tig0016220:-72333 | Msa1357950:CDS |
| CTTCAGATGATCAACATCCA+CGG | 0.640502 | tig0016220:+72250 | None:intergenic |
| AGTCGACGGAAGAAGTTGAT+CGG | 0.641660 | tig0016220:+70751 | None:intergenic |
| GTCGAAGTAAAGTTCTACAA+AGG | 0.652130 | tig0016220:+73810 | None:intergenic |
| TCACCAAGCAGTAAACATAG+TGG | 0.653759 | tig0016220:-71604 | Msa1357950:CDS |
| GGTGCCAAAGGACTATCTGG+TGG | 0.654724 | tig0016220:+72797 | None:intergenic |
| GTTGATGGTTTGTGTTAGGG+AGG | 0.657066 | tig0016220:+73350 | None:intergenic |
| GAACGCTGTGGAGAGGCGTG+CGG | 0.658744 | tig0016220:-72321 | Msa1357950:CDS |
| AAAAGATGAGATCATTGGGA+GGG | 0.659454 | tig0016220:-72357 | Msa1357950:CDS |
| CCATTCATCATTGAACCCGT+AGG | 0.661796 | tig0016220:+73418 | None:intergenic |
| TGAGAAACAACACATGAACA+AGG | 0.662150 | tig0016220:+71385 | None:intergenic |
| CCACTGCAAAACAGTTATGG+AGG | 0.665722 | tig0016220:-72130 | Msa1357950:CDS |
| GTGATGAAATGTGTGTCTTG+AGG | 0.667671 | tig0016220:+73372 | None:intergenic |
| CTACGGCTATGTCTGGATGG+AGG | 0.669332 | tig0016220:-72200 | Msa1357950:CDS |
| GTGAGAATTGGCAATTACAG+AGG | 0.669944 | tig0016220:-72995 | Msa1357950:CDS |
| TTTCCCGGATGCATATGTCA+AGG | 0.673533 | tig0016220:-72525 | Msa1357950:CDS |
| TCGCCTTGACGATAAGAAAG+GGG | 0.675420 | tig0016220:-72765 | Msa1357950:CDS |
| GAAACAAGTCCGTTTCTCGG+TGG | 0.679691 | tig0016220:-73172 | Msa1357950:CDS |
| GTATGATCGTTTGAGGAGCG+TGG | 0.680386 | tig0016220:-70992 | Msa1357950:CDS |
| ACACGAACGTACCACAACCT+CGG | 0.680879 | tig0016220:+72593 | None:intergenic |
| GGTTAGGTGATATTTGCATG+TGG | 0.684481 | tig0016220:-71428 | Msa1357950:CDS |
| GAAAAGATGAGATCATTGGG+AGG | 0.684584 | tig0016220:-72358 | Msa1357950:CDS |
| ATACAACGAGCAATACACTT+GGG | 0.691267 | tig0016220:-71949 | Msa1357950:CDS |
| TATCGACTCTTGAAACAGGA+CGG | 0.694274 | tig0016220:-71815 | Msa1357950:CDS |
| CAACGAGCAATACACTTGGG+AGG | 0.698127 | tig0016220:-71946 | Msa1357950:CDS |
| GAATGGTTTATCTCGTGACA+AGG | 0.701389 | tig0016220:-73401 | Msa1357950:CDS |
| ACTCCACCCAATGAAAACAA+GGG | 0.702014 | tig0016220:-72063 | Msa1357950:CDS |
| GACACCTACTGTGAGGACTG+TGG | 0.709482 | tig0016220:+71911 | None:intergenic |
| CAAAGGTCTATCATGCTCCG+AGG | 0.711392 | tig0016220:-72610 | Msa1357950:CDS |
| ATGAATAAAGAAGTAGCACG+CGG | 0.714106 | tig0016220:+70892 | None:intergenic |
| CAGTAAACATAGTGGCAGCG+CGG | 0.720769 | tig0016220:-71596 | Msa1357950:CDS |
| TGTCAAAGACACCTACTGTG+AGG | 0.734255 | tig0016220:+71904 | None:intergenic |
| ATAAGAATCAGAATCCGGAG+TGG | 0.742906 | tig0016220:-72955 | Msa1357950:CDS |
| ATTCCTCATCCATTTCATCG+GGG | 0.747292 | tig0016220:+71061 | None:intergenic |
| GGACAAAAGAAGTACCTGTG+AGG | 0.754029 | tig0016220:+73617 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAGATCCTTTTCTTTAA+TGG | + | tig0016220:70847-70866 | None:intergenic | 20.0% |
| !!! | TATCAGTGATGTAAATTTTA+AGG | + | tig0016220:71097-71116 | None:intergenic | 20.0% |
| !! | TATGCAATCATGTATAAATA+GGG | + | tig0016220:73391-73410 | None:intergenic | 20.0% |
| !! | ATATGCAATCATGTATAAAT+AGG | + | tig0016220:73392-73411 | None:intergenic | 20.0% |
| !!! | ATTTGGAATTGAGGATTTTA+TGG | + | tig0016220:71126-71145 | None:intergenic | 25.0% |
| !!! | GATGTATTTTTTGTATGTCA+GGG | - | tig0016220:71532-71551 | Msa1357950:CDS | 25.0% |
| ! | AGTATTACATGATCTTCAAA+AGG | + | tig0016220:72208-72227 | None:intergenic | 25.0% |
| ! | TGAAGATCATGTAATACTTT+CGG | - | tig0016220:72210-72229 | Msa1357950:CDS | 25.0% |
| ! | ATAGAATCATTCATTCTAGA+TGG | - | tig0016220:72317-72336 | Msa1357950:CDS | 25.0% |
| ! | ACATATTGTGTAGCAAAATA+CGG | - | tig0016220:72592-72611 | Msa1357950:CDS | 25.0% |
| ! | ACAACAAAGACTTGAAAATT+GGG | - | tig0016220:72758-72777 | Msa1357950:CDS | 25.0% |
| ! | CCTGATATTGAAAATAAAGT+TGG | + | tig0016220:73472-73491 | None:intergenic | 25.0% |
| !!! | CCAACTTTATTTTCAATATC+AGG | - | tig0016220:73469-73488 | Msa1357950:CDS | 25.0% |
| !! | ATATGTTACTCCTTTTCAAA+TGG | - | tig0016220:73773-73792 | Msa1357950:CDS | 25.0% |
| TTTGTAGAACTTTACTTCGA+CGG | - | tig0016220:70804-70823 | Msa1357950:CDS | 30.0% | |
| ! | TAATGGTTGTTCGAAACTTT+TGG | + | tig0016220:70830-70849 | None:intergenic | 30.0% |
| TCGAACAACCATTAAAGAAA+AGG | - | tig0016220:70836-70855 | Msa1357950:CDS | 30.0% | |
| AAAAGGATCTTAATCCTGTT+TGG | - | tig0016220:70853-70872 | Msa1357950:CDS | 30.0% | |
| ACTAACTCAAGTTCATTTCT+TGG | - | tig0016220:70963-70982 | Msa1357950:CDS | 30.0% | |
| ACTTCAGCATGATTATTTGT+CGG | + | tig0016220:71167-71186 | None:intergenic | 30.0% | |
| ATTTCATCAGCTTCATACTT+CGG | + | tig0016220:71338-71357 | None:intergenic | 30.0% | |
| TCTTTAAGTGCAAAATCAAC+CGG | + | tig0016220:71422-71441 | None:intergenic | 30.0% | |
| AACTAGATCATATGTACTTG+CGG | + | tig0016220:71507-71526 | None:intergenic | 30.0% | |
| GTACATATGATCTAGTTGAA+AGG | - | tig0016220:71510-71529 | Msa1357950:CDS | 30.0% | |
| !!! | GGATGTATTTTTTGTATGTC+AGG | - | tig0016220:71531-71550 | Msa1357950:CDS | 30.0% |
| CTGATTCTTATCATAGTGTT+TGG | + | tig0016220:71648-71667 | None:intergenic | 30.0% | |
| CTATGATAAGAATCAGAATC+CGG | - | tig0016220:71652-71671 | Msa1357950:CDS | 30.0% | |
| ! | TCAGGTTTTTGCATTTTCAA+AGG | - | tig0016220:71682-71701 | Msa1357950:CDS | 30.0% |
| ! | CTCATCAAAGATGATTTTGT+AGG | - | tig0016220:71752-71771 | Msa1357950:CDS | 30.0% |
| !! | ATGATTTTGTAGGTATTGTG+AGG | - | tig0016220:71762-71781 | Msa1357950:CDS | 30.0% |
| AAAGATCTTCATTCCATTGT+GGG | + | tig0016220:72168-72187 | None:intergenic | 30.0% | |
| AAAAGATCTTCATTCCATTG+TGG | + | tig0016220:72169-72188 | None:intergenic | 30.0% | |
| CACAACAAAGACTTGAAAAT+TGG | - | tig0016220:72757-72776 | Msa1357950:CDS | 30.0% | |
| ! | AATAGGTAGAGAAAAAGTGT+AGG | + | tig0016220:73282-73301 | None:intergenic | 30.0% |
| TTTCTCTACCTATTCTTGAT+AGG | - | tig0016220:73288-73307 | Msa1357950:CDS | 30.0% | |
| AAATTCCTCATCCATTTCAT+CGG | + | tig0016220:73556-73575 | None:intergenic | 30.0% | |
| GTCGAAGTAAAGTTCTACAA+AGG | + | tig0016220:70805-70824 | None:intergenic | 35.0% | |
| AAGAGTGAGATAGTGAAGAT+TGG | + | tig0016220:70913-70932 | None:intergenic | 35.0% | |
| !! | TTGAGTTAGTAGCTTTGGAA+TGG | + | tig0016220:70953-70972 | None:intergenic | 35.0% |
| TGAACTTGAGTTAGTAGCTT+TGG | + | tig0016220:70958-70977 | None:intergenic | 35.0% | |
| ! | GGAATTGAGGATTTTATGGT+TGG | + | tig0016220:71122-71141 | None:intergenic | 35.0% |
| ! | AACAGAAGGATTTGGAATTG+AGG | + | tig0016220:71135-71154 | None:intergenic | 35.0% |
| AATAATCATGCTGAAGTCCA+TGG | - | tig0016220:71170-71189 | Msa1357950:intron | 35.0% | |
| AAAGAAACAAGTCCGTTTCT+CGG | - | tig0016220:71437-71456 | Msa1357950:CDS | 35.0% | |
| TGTACTAGAAGTTGTGATCA+AGG | - | tig0016220:71721-71740 | Msa1357950:CDS | 35.0% | |
| AAGAAAGGGGAGAAAGTTAA+AGG | - | tig0016220:71860-71879 | Msa1357950:CDS | 35.0% | |
| !! | ATGAAGCATTTTCTGATGCA+TGG | - | tig0016220:71921-71940 | Msa1357950:CDS | 35.0% |
| !!! | CTGTTTTTGTTTTCAGCACT+TGG | + | tig0016220:72126-72145 | None:intergenic | 35.0% |
| TACATGATCTTCAAAAGGCT+CGG | + | tig0016220:72203-72222 | None:intergenic | 35.0% | |
| AAAAGATGAGATCATTGGGA+GGG | - | tig0016220:72255-72274 | Msa1357950:CDS | 35.0% | |
| TCATTCTAGATGGTTCAACT+TGG | - | tig0016220:72327-72346 | Msa1357950:CDS | 35.0% | |
| !! | AGTTCTAAAACACCAATTGG+TGG | + | tig0016220:72508-72527 | None:intergenic | 35.0% |
| !!! | CCAATTGGTGTTTTAGAACT+CGG | - | tig0016220:72508-72527 | Msa1357950:CDS | 35.0% |
| !!! | TACCATCCCTTGTTTTCATT+GGG | + | tig0016220:72558-72577 | None:intergenic | 35.0% |
| TAGCAAAATACGGTCACAAA+TGG | - | tig0016220:72602-72621 | Msa1357950:CDS | 35.0% | |
| AGCAAAATACGGTCACAAAT+GGG | - | tig0016220:72603-72622 | Msa1357950:CDS | 35.0% | |
| ! | GTGTATTGCTCGTTGTATTT+TGG | + | tig0016220:72661-72680 | None:intergenic | 35.0% |
| AATACAACGAGCAATACACT+TGG | - | tig0016220:72662-72681 | Msa1357950:CDS | 35.0% | |
| ATACAACGAGCAATACACTT+GGG | - | tig0016220:72663-72682 | Msa1357950:CDS | 35.0% | |
| TTTGACAATTCCCAAATCAG+TGG | - | tig0016220:72724-72743 | Msa1357950:CDS | 35.0% | |
| CAAAGACTTGAAAATTGGGA+AGG | - | tig0016220:72762-72781 | Msa1357950:CDS | 35.0% | |
| ! | CCATTTTCTTAACACCAGTT+GGG | + | tig0016220:72858-72877 | None:intergenic | 35.0% |
| ! | CCAACTGGTGTTAAGAAAAT+GGG | - | tig0016220:72856-72875 | Msa1357950:CDS | 35.0% |
| TTTGCAGTTGGAAAATGGTT+AGG | - | tig0016220:73168-73187 | Msa1357950:CDS | 35.0% | |
| TGAACAAGGACTGTTGTAAT+AGG | + | tig0016220:73216-73235 | None:intergenic | 35.0% | |
| TGAGAAACAACACATGAACA+AGG | + | tig0016220:73230-73249 | None:intergenic | 35.0% | |
| !! | TCATGTGTTGTTTCTCATGT+TGG | - | tig0016220:73233-73252 | Msa1357950:CDS | 35.0% |
| ACCTATTCTTGATAGGTGTA+TGG | - | tig0016220:73295-73314 | Msa1357950:CDS | 35.0% | |
| TCCATACACCTATCAAGAAT+AGG | + | tig0016220:73299-73318 | None:intergenic | 35.0% | |
| AATTCCTCATCCATTTCATC+GGG | + | tig0016220:73555-73574 | None:intergenic | 35.0% | |
| ATGAATAAAGAAGTAGCACG+CGG | + | tig0016220:73723-73742 | None:intergenic | 35.0% | |
| ! | TTTCTGTTTGTTAGCTGCTT+TGG | - | tig0016220:73746-73765 | Msa1357950:CDS | 35.0% |
| ! | TGTTACTCCTTTTCAAATGG+TGG | - | tig0016220:73776-73795 | Msa1357950:CDS | 35.0% |
| TAGCAGGTTTCTATTTCATG+AGG | - | tig0016220:73805-73824 | Msa1357950:CDS | 35.0% | |
| AACATACTATCAGTTCTTGC+AGG | + | tig0016220:73888-73907 | None:intergenic | 35.0% | |
| CTTAAAGTTAGGGGTAGATG+TGG | - | tig0016220:70731-70750 | Msa1357950:CDS | 40.0% | |
| CACAATCTACTACCCAAAGA+TGG | - | tig0016220:70762-70781 | Msa1357950:CDS | 40.0% | |
| TAGAAGCTCTCATTCCAAAC+AGG | + | tig0016220:70870-70889 | None:intergenic | 40.0% | |
| GTGAGATAGTGAAGATTGGA+AGG | + | tig0016220:70909-70928 | None:intergenic | 40.0% | |
| ATGGACTCAACAGAAGGATT+TGG | + | tig0016220:71143-71162 | None:intergenic | 40.0% | |
| AGCATGATTATTTGTCGGCA+TGG | + | tig0016220:71162-71181 | None:intergenic | 40.0% | |
| GAATGGTTTATCTCGTGACA+AGG | - | tig0016220:71211-71230 | Msa1357950:intron | 40.0% | |
| GTGATGAAATGTGTGTCTTG+AGG | + | tig0016220:71243-71262 | None:intergenic | 40.0% | |
| TCCCTAACACAAACCATCAA+CGG | - | tig0016220:71264-71283 | Msa1357950:intron | 40.0% | |
| ! | TGTACTAGCTTCATAGGTTG+TGG | + | tig0016220:71374-71393 | None:intergenic | 40.0% |
| ! | TGCATGTGTACTAGCTTCAT+AGG | + | tig0016220:71380-71399 | None:intergenic | 40.0% |
| CTCAGTTACATCACTACAAC+CGG | - | tig0016220:71400-71419 | Msa1357950:CDS | 40.0% | |
| TTTGTATGTCAGGGTCGTTA+AGG | - | tig0016220:71541-71560 | Msa1357950:CDS | 40.0% | |
| CTTCCTTCTATGGATCTTAC+CGG | - | tig0016220:71572-71591 | Msa1357950:CDS | 40.0% | |
| TTCCTTCTATGGATCTTACC+GGG | - | tig0016220:71573-71592 | Msa1357950:CDS | 40.0% | |
| AACAAATGGATCAAGACTCC+CGG | + | tig0016220:71594-71613 | None:intergenic | 40.0% | |
| ! | GAGTCTTGATCCATTTGTTG+AGG | - | tig0016220:71595-71614 | Msa1357950:CDS | 40.0% |
| CCAATTCTCACCTCAACAAA+TGG | + | tig0016220:71608-71627 | None:intergenic | 40.0% | |
| ! | CCATTTGTTGAGGTGAGAAT+TGG | - | tig0016220:71605-71624 | Msa1357950:CDS | 40.0% |
| GTGAGAATTGGCAATTACAG+AGG | - | tig0016220:71617-71636 | Msa1357950:CDS | 40.0% | |
| ATAAGAATCAGAATCCGGAG+TGG | - | tig0016220:71657-71676 | Msa1357950:CDS | 40.0% | |
| CTATCTGGTGGAACTCTTAA+AGG | + | tig0016220:71806-71825 | None:intergenic | 40.0% | |
| TATCGCCTTGACGATAAGAA+AGG | - | tig0016220:71845-71864 | Msa1357950:CDS | 40.0% | |
| ATCGCCTTGACGATAAGAAA+GGG | - | tig0016220:71846-71865 | Msa1357950:CDS | 40.0% | |
| TTGATGCTAGCTGTTTGGAT+TGG | - | tig0016220:71887-71906 | Msa1357950:CDS | 40.0% | |
| TACGACAGTGATACGTTCAA+AGG | - | tig0016220:71985-72004 | Msa1357950:CDS | 40.0% | |
| AGCACAAGACTTGATTCCAA+CGG | - | tig0016220:72054-72073 | Msa1357950:CDS | 40.0% | |
| CTAGAACTCTAAACCCACAA+TGG | - | tig0016220:72152-72171 | Msa1357950:CDS | 40.0% | |
| ! | CCAATGATCTCATCTTTTCC+CGG | + | tig0016220:72253-72272 | None:intergenic | 40.0% |
| CGGGAAAAGATGAGATCATT+GGG | - | tig0016220:72251-72270 | Msa1357950:CDS | 40.0% | |
| GAAAAGATGAGATCATTGGG+AGG | - | tig0016220:72254-72273 | Msa1357950:CDS | 40.0% | |
| CTTCAGATGATCAACATCCA+CGG | + | tig0016220:72365-72384 | None:intergenic | 40.0% | |
| TTGCAAGCAGAATTCAGCTA+CGG | - | tig0016220:72395-72414 | Msa1357950:CDS | 40.0% | |
| ! | TCCATAACTGTTTTGCAGTG+GGG | + | tig0016220:72483-72502 | None:intergenic | 40.0% |
| ! | CTCCATAACTGTTTTGCAGT+GGG | + | tig0016220:72484-72503 | None:intergenic | 40.0% |
| !! | CCGAGTTCTAAAACACCAAT+TGG | + | tig0016220:72511-72530 | None:intergenic | 40.0% |
| ACTCCACCCAATGAAAACAA+GGG | - | tig0016220:72549-72568 | Msa1357950:CDS | 40.0% | |
| !!! | CTACCATCCCTTGTTTTCAT+TGG | + | tig0016220:72559-72578 | None:intergenic | 40.0% |
| ATGAAAACAAGGGATGGTAG+AGG | - | tig0016220:72559-72578 | Msa1357950:CDS | 40.0% | |
| TTCCCAAATCAGTGGTGAAA+AGG | - | tig0016220:72732-72751 | Msa1357950:CDS | 40.0% | |
| TCCCAAATCAGTGGTGAAAA+GGG | - | tig0016220:72733-72752 | Msa1357950:CDS | 40.0% | |
| !!! | ACCCTTTTCACCACTGATTT+GGG | + | tig0016220:72737-72756 | None:intergenic | 40.0% |
| !! | TATCGACTCTTGAAACAGGA+CGG | - | tig0016220:72797-72816 | Msa1357950:CDS | 40.0% |
| ! | CCCAACTGGTGTTAAGAAAA+TGG | - | tig0016220:72855-72874 | Msa1357950:CDS | 40.0% |
| ! | CCCATTTTCTTAACACCAGT+TGG | + | tig0016220:72859-72878 | None:intergenic | 40.0% |
| GAAAATGGGAGAACTTCACT+TGG | - | tig0016220:72870-72889 | Msa1357950:CDS | 40.0% | |
| !!! | GGAGAAGTGGTTTTGAGTAT+AGG | + | tig0016220:72936-72955 | None:intergenic | 40.0% |
| !! | TAATGCATTTTCGGGAGAAG+TGG | + | tig0016220:72949-72968 | None:intergenic | 40.0% |
| TCCCGAAAATGCATTACGTT+AGG | - | tig0016220:72953-72972 | Msa1357950:CDS | 40.0% | |
| ! | GCCTAACGTAATGCATTTTC+GGG | + | tig0016220:72957-72976 | None:intergenic | 40.0% |
| ! | GGCCTAACGTAATGCATTTT+CGG | + | tig0016220:72958-72977 | None:intergenic | 40.0% |
| TCACCAAGCAGTAAACATAG+TGG | - | tig0016220:73008-73027 | Msa1357950:CDS | 40.0% | |
| !! | CAGATGTTGACTCACATCTA+TGG | - | tig0016220:73088-73107 | Msa1357950:CDS | 40.0% |
| GAAAGAAGTTTGCCTTGCTA+CGG | + | tig0016220:73122-73141 | None:intergenic | 40.0% | |
| CACCAGAAAAAACTGTCATG+AGG | + | tig0016220:73146-73165 | None:intergenic | 40.0% | |
| !! | TTTTCTGGTGTGTTTGCAGT+TGG | - | tig0016220:73156-73175 | Msa1357950:CDS | 40.0% |
| GTGTGTTTGCAGTTGGAAAA+TGG | - | tig0016220:73163-73182 | Msa1357950:CDS | 40.0% | |
| GGTTAGGTGATATTTGCATG+TGG | - | tig0016220:73184-73203 | Msa1357950:CDS | 40.0% | |
| AGTGTAGGCAAAATCAACTC+CGG | + | tig0016220:73267-73286 | None:intergenic | 40.0% | |
| TGATAGGTGTATGGAACTTC+AGG | - | tig0016220:73304-73323 | Msa1357950:CDS | 40.0% | |
| TTCTTGTGTTCATGTGTGGA+GGG | + | tig0016220:73509-73528 | None:intergenic | 40.0% | |
| ATTCTTGTGTTCATGTGTGG+AGG | + | tig0016220:73510-73529 | None:intergenic | 40.0% | |
| GAGATTCTTGTGTTCATGTG+TGG | + | tig0016220:73513-73532 | None:intergenic | 40.0% | |
| CATGAACACAAGAATCTCAC+AGG | - | tig0016220:73515-73534 | Msa1357950:CDS | 40.0% | |
| ATTCCTCATCCATTTCATCG+GGG | + | tig0016220:73554-73573 | None:intergenic | 40.0% | |
| ! | AGGTCAGGATTTTTGCTTGT+TGG | + | tig0016220:73588-73607 | None:intergenic | 40.0% |
| ATCCTGACCTTGTAAGAATG+CGG | - | tig0016220:73598-73617 | Msa1357950:CDS | 40.0% | |
| GATCATACCGCATTCTTACA+AGG | + | tig0016220:73608-73627 | None:intergenic | 40.0% | |
| GGTAGAATACAAACGGTTGT+AGG | - | tig0016220:73645-73664 | Msa1357950:CDS | 40.0% | |
| ACAAACGGTTGTAGGTGATT+TGG | - | tig0016220:73653-73672 | Msa1357950:CDS | 40.0% | |
| AAACCAGCCACCATTTGAAA+AGG | + | tig0016220:73786-73805 | None:intergenic | 40.0% | |
| AAGTTAGGGGTAGATGTGGT+TGG | - | tig0016220:70735-70754 | Msa1357950:CDS | 45.0% | |
| CTACTACCCAAAGATGGAGA+AGG | - | tig0016220:70768-70787 | Msa1357950:CDS | 45.0% | |
| GAAGAGCCTTCTCCATCTTT+GGG | + | tig0016220:70777-70796 | None:intergenic | 45.0% | |
| AGAAGAGCCTTCTCCATCTT+TGG | + | tig0016220:70778-70797 | None:intergenic | 45.0% | |
| !! | TAGTAGCTTTGGAATGGCAG+TGG | + | tig0016220:70947-70966 | None:intergenic | 45.0% |
| !! | GGACAAAAGAAGTACCTGTG+AGG | + | tig0016220:70998-71017 | None:intergenic | 45.0% |
| AGACAACTGCATCAGCTTGA+GGG | + | tig0016220:71019-71038 | None:intergenic | 45.0% | |
| AAGACAACTGCATCAGCTTG+AGG | + | tig0016220:71020-71039 | None:intergenic | 45.0% | |
| AGTTGTCTTGCACTATCCGT+TGG | - | tig0016220:71031-71050 | Msa1357950:CDS | 45.0% | |
| ! | AAAATCCCGCGCTTTTCCAA+CGG | + | tig0016220:71050-71069 | None:intergenic | 45.0% |
| CCATTCATCATTGAACCCGT+AGG | + | tig0016220:71197-71216 | None:intergenic | 45.0% | |
| CCTACGGGTTCAATGATGAA+TGG | - | tig0016220:71194-71213 | Msa1357950:intron | 45.0% | |
| !! | GTTGATGGTTTGTGTTAGGG+AGG | + | tig0016220:71265-71284 | None:intergenic | 45.0% |
| !! | GCCGTTGATGGTTTGTGTTA+GGG | + | tig0016220:71268-71287 | None:intergenic | 45.0% |
| !! | TGCCGTTGATGGTTTGTGTT+AGG | + | tig0016220:71269-71288 | None:intergenic | 45.0% |
| GTGAGTATCTGCATATCCAG+TGG | + | tig0016220:71309-71328 | None:intergenic | 45.0% | |
| AGTTCCACCAGATAGTCCTT+TGG | - | tig0016220:71811-71830 | Msa1357950:CDS | 45.0% | |
| ATCGTCAAGGCGATACCATT+CGG | + | tig0016220:71840-71859 | None:intergenic | 45.0% | |
| TCGCCTTGACGATAAGAAAG+GGG | - | tig0016220:71847-71866 | Msa1357950:CDS | 45.0% | |
| TCTCCCCTTTCTTATCGTCA+AGG | + | tig0016220:71853-71872 | None:intergenic | 45.0% | |
| !! | GTGAGTTGATGCTAGCTGTT+TGG | - | tig0016220:71882-71901 | Msa1357950:CDS | 45.0% |
| AACGGAGAAAAACCGTTTCC+CGG | - | tig0016220:72072-72091 | Msa1357950:CDS | 45.0% | |
| TGACATATGCATCCGGGAAA+CGG | + | tig0016220:72087-72106 | None:intergenic | 45.0% | |
| TTTCCCGGATGCATATGTCA+AGG | - | tig0016220:72087-72106 | Msa1357950:CDS | 45.0% | |
| TGGACCTTGACATATGCATC+CGG | + | tig0016220:72094-72113 | None:intergenic | 45.0% | |
| GCATATGTCAAGGTCCAGAT+AGG | - | tig0016220:72097-72116 | Msa1357950:CDS | 45.0% | |
| TCAGCACTTGGTTTCCTATC+TGG | + | tig0016220:72114-72133 | None:intergenic | 45.0% | |
| ! | TGTGGGTTTAGAGTTCTAGC+AGG | + | tig0016220:72151-72170 | None:intergenic | 45.0% |
| CTTTCGGTTGAAGATCGAGT+TGG | - | tig0016220:72226-72245 | Msa1357950:CDS | 45.0% | |
| CCGGGAAAAGATGAGATCAT+TGG | - | tig0016220:72250-72269 | Msa1357950:CDS | 45.0% | |
| AATTCAGCTACGGCTATGTC+TGG | - | tig0016220:72405-72424 | Msa1357950:CDS | 45.0% | |
| ! | CCTCCATAACTGTTTTGCAG+TGG | + | tig0016220:72485-72504 | None:intergenic | 45.0% |
| CCACTGCAAAACAGTTATGG+AGG | - | tig0016220:72482-72501 | Msa1357950:CDS | 45.0% | |
| GACTCCACCCAATGAAAACA+AGG | - | tig0016220:72548-72567 | Msa1357950:CDS | 45.0% | |
| !!! | CATCCCTTGTTTTCATTGGG+TGG | + | tig0016220:72555-72574 | None:intergenic | 45.0% |
| CACCCAATGAAAACAAGGGA+TGG | - | tig0016220:72553-72572 | Msa1357950:CDS | 45.0% | |
| GTCACAAATGGGTCAGAACA+AGG | - | tig0016220:72614-72633 | Msa1357950:CDS | 45.0% | |
| TGTCAAAGACACCTACTGTG+AGG | + | tig0016220:72711-72730 | None:intergenic | 45.0% | |
| !! | GACCCTTTTCACCACTGATT+TGG | + | tig0016220:72738-72757 | None:intergenic | 45.0% |
| !! | CGCATATCGACTCTTGAAAC+AGG | - | tig0016220:72793-72812 | Msa1357950:CDS | 45.0% |
| GTTGGGTGAAGAACAAGCAA+TGG | + | tig0016220:72841-72860 | None:intergenic | 45.0% | |
| TTGCTTGTTCTTCACCCAAC+TGG | - | tig0016220:72841-72860 | Msa1357950:CDS | 45.0% | |
| CTGCCACTATGTTTACTGCT+TGG | + | tig0016220:73014-73033 | None:intergenic | 45.0% | |
| TCCACGACTTCTTTACGAAG+CGG | + | tig0016220:73060-73079 | None:intergenic | 45.0% | |
| !!! | CGCCTCATGACAGTTTTTTC+TGG | - | tig0016220:73141-73160 | Msa1357950:CDS | 45.0% |
| !! | TCTCATGTTGGTTTGCTTCC+CGG | - | tig0016220:73245-73264 | Msa1357950:CDS | 45.0% |
| GTGTAGGCAAAATCAACTCC+GGG | + | tig0016220:73266-73285 | None:intergenic | 45.0% | |
| !! | TTCATGTGTGGAGGGTATCT+TGG | + | tig0016220:73501-73520 | None:intergenic | 45.0% |
| TGTAGTACACCCCGATGAAA+TGG | - | tig0016220:73542-73561 | Msa1357950:CDS | 45.0% | |
| TACCGCATTCTTACAAGGTC+AGG | + | tig0016220:73603-73622 | None:intergenic | 45.0% | |
| GAATGCGGTATGATCGTTTG+AGG | - | tig0016220:73613-73632 | Msa1357950:CDS | 45.0% | |
| CGTGGCTGGTAGAATACAAA+CGG | - | tig0016220:73638-73657 | Msa1357950:CDS | 45.0% | |
| ! | ACTCCTTTTCAAATGGTGGC+TGG | - | tig0016220:73780-73799 | Msa1357950:CDS | 45.0% |
| GGAAGCCTGTTTCGAAATCT+GGG | + | tig0016220:73834-73853 | None:intergenic | 45.0% | |
| ! | AAGAAGTTGATCGGTGCAGA+CGG | + | tig0016220:73855-73874 | None:intergenic | 45.0% |
| ! | AGTCGACGGAAGAAGTTGAT+CGG | + | tig0016220:73864-73883 | None:intergenic | 45.0% |
| ! | CTTGGCAAAGTTAGCCTCAC+AGG | - | tig0016220:70981-71000 | Msa1357950:CDS | 50.0% |
| CACTATCCGTTGGAAAAGCG+CGG | - | tig0016220:71041-71060 | Msa1357950:CDS | 50.0% | |
| ! | ACTATCCGTTGGAAAAGCGC+GGG | - | tig0016220:71042-71061 | Msa1357950:CDS | 50.0% |
| ! | GGGATTTTCTCTCGCGTAAG+AGG | - | tig0016220:71062-71081 | Msa1357950:CDS | 50.0% |
| TGCTGAAGTCCATGGACCTA+CGG | - | tig0016220:71178-71197 | Msa1357950:intron | 50.0% | |
| TCATTGAACCCGTAGGTCCA+TGG | + | tig0016220:71190-71209 | None:intergenic | 50.0% | |
| GTTGATGCTGATGCCGTTGA+TGG | + | tig0016220:71280-71299 | None:intergenic | 50.0% | |
| CAGCATCAACAACACTCCAC+TGG | - | tig0016220:71290-71309 | Msa1357950:intron | 50.0% | |
| GAAACAAGTCCGTTTCTCGG+TGG | - | tig0016220:71440-71459 | Msa1357950:CDS | 50.0% | |
| CTCCCGGTAAGATCCATAGA+AGG | + | tig0016220:71578-71597 | None:intergenic | 50.0% | |
| GCAAAAACCTGATGCCACTC+CGG | + | tig0016220:71674-71693 | None:intergenic | 50.0% | |
| ATAGTCCTTTGGCACCCGAA+TGG | - | tig0016220:71822-71841 | Msa1357950:CDS | 50.0% | |
| TCGTCAAGGCGATACCATTC+GGG | + | tig0016220:71839-71858 | None:intergenic | 50.0% | |
| TTCAGATGCAGCTTCACCTG+TGG | - | tig0016220:71946-71965 | Msa1357950:CDS | 50.0% | |
| CGTATCACTGTCGTAGTAGC+AGG | + | tig0016220:71980-71999 | None:intergenic | 50.0% | |
| CAAAGGTCTATCATGCTCCG+AGG | - | tig0016220:72002-72021 | Msa1357950:CDS | 50.0% | |
| TCTATCATGCTCCGAGGTTG+TGG | - | tig0016220:72008-72027 | Msa1357950:CDS | 50.0% | |
| ACACGAACGTACCACAACCT+CGG | + | tig0016220:72022-72041 | None:intergenic | 50.0% | |
| ! | GGGAAACGGTTTTTCTCCGT+TGG | + | tig0016220:72073-72092 | None:intergenic | 50.0% |
| GGACCTTGACATATGCATCC+GGG | + | tig0016220:72093-72112 | None:intergenic | 50.0% | |
| !! | GGTTGAAGATCGAGTTGGTC+CGG | - | tig0016220:72231-72250 | Msa1357950:CDS | 50.0% |
| !! | GTTGAAGATCGAGTTGGTCC+GGG | - | tig0016220:72232-72251 | Msa1357950:CDS | 50.0% |
| TGATCAACATCCACGGCAAC+AGG | + | tig0016220:72358-72377 | None:intergenic | 50.0% | |
| GCCCCACTGCAAAACAGTTA+TGG | - | tig0016220:72479-72498 | Msa1357950:CDS | 50.0% | |
| CAGTTATGGAGGCCACCAAT+TGG | - | tig0016220:72493-72512 | Msa1357950:CDS | 50.0% | |
| !! | CTCGGAGTGCTGAATGCAAT+AGG | - | tig0016220:72526-72545 | Msa1357950:CDS | 50.0% |
| CAACGAGCAATACACTTGGG+AGG | - | tig0016220:72666-72685 | Msa1357950:CDS | 50.0% | |
| ! | TCGAGTTGCATGACTGCGAA+TGG | + | tig0016220:72979-72998 | None:intergenic | 50.0% |
| CAGTAAACATAGTGGCAGCG+CGG | - | tig0016220:73016-73035 | Msa1357950:CDS | 50.0% | |
| ACGACTTCTTTACGAAGCGG+TGG | + | tig0016220:73057-73076 | None:intergenic | 50.0% | |
| ACCGCTTCGTAAAGAAGTCG+TGG | - | tig0016220:73056-73075 | Msa1357950:CDS | 50.0% | |
| !! | TGTGTGGAGGGTATCTTGGT+CGG | + | tig0016220:73497-73516 | None:intergenic | 50.0% |
| ACACCCCGATGAAATGGATG+AGG | - | tig0016220:73548-73567 | Msa1357950:CDS | 50.0% | |
| GTATGATCGTTTGAGGAGCG+TGG | - | tig0016220:73620-73639 | Msa1357950:CDS | 50.0% | |
| ! | TGTAGGTGATTTGGCTAGCC+AGG | - | tig0016220:73662-73681 | Msa1357950:CDS | 50.0% |
| ! | GTAGGTGATTTGGCTAGCCA+GGG | - | tig0016220:73663-73682 | Msa1357950:CDS | 50.0% |
| GGATTCATGCACTGTTGAGC+TGG | - | tig0016220:73691-73710 | Msa1357950:CDS | 50.0% | |
| !! | CAAATGGTGGCTGGTTTAGC+AGG | - | tig0016220:73789-73808 | Msa1357950:CDS | 50.0% |
| GGCATCCCAGATTTCGAAAC+AGG | - | tig0016220:73826-73845 | Msa1357950:CDS | 50.0% | |
| CGGAAGCCTGTTTCGAAATC+TGG | + | tig0016220:73835-73854 | None:intergenic | 50.0% | |
| CAGTTCTTGCAGGAAGTCGA+CGG | + | tig0016220:73878-73897 | None:intergenic | 50.0% | |
| TCTCGCGTAAGAGGTGAGCT+TGG | - | tig0016220:71071-71090 | Msa1357950:CDS | 55.0% | |
| GTCGGCATGGACTCAACAGA+AGG | + | tig0016220:71149-71168 | None:intergenic | 55.0% | |
| GCTGAAGTCCATGGACCTAC+GGG | - | tig0016220:71179-71198 | Msa1357950:intron | 55.0% | |
| ACAAGTCCGTTTCTCGGTGG+AGG | - | tig0016220:71443-71462 | Msa1357950:CDS | 55.0% | |
| TCCGTTTCTCGGTGGAGGAA+GGG | - | tig0016220:71448-71467 | Msa1357950:CDS | 55.0% | |
| ACCCTTCCTCCACCGAGAAA+CGG | + | tig0016220:71452-71471 | None:intergenic | 55.0% | |
| GGCTCGTGAGCTTCCTTCTA+TGG | - | tig0016220:71562-71581 | Msa1357950:CDS | 55.0% | |
| TCAGAATCCGGAGTGGCATC+AGG | - | tig0016220:71664-71683 | Msa1357950:CDS | 55.0% | |
| GGTGCCAAAGGACTATCTGG+TGG | + | tig0016220:71818-71837 | None:intergenic | 55.0% | |
| TCGGGTGCCAAAGGACTATC+TGG | + | tig0016220:71821-71840 | None:intergenic | 55.0% | |
| CGATACCATTCGGGTGCCAA+AGG | + | tig0016220:71830-71849 | None:intergenic | 55.0% | |
| TACCATACCGCTGAACGCTG+TGG | - | tig0016220:72279-72298 | Msa1357950:CDS | 55.0% | |
| CTTGGAAAAGCCTGTTGCCG+TGG | - | tig0016220:72345-72364 | Msa1357950:CDS | 55.0% | |
| CAGCTACGGCTATGTCTGGA+TGG | - | tig0016220:72409-72428 | Msa1357950:CDS | 55.0% | |
| CTACGGCTATGTCTGGATGG+AGG | - | tig0016220:72412-72431 | Msa1357950:CDS | 55.0% | |
| GACACCTACTGTGAGGACTG+TGG | + | tig0016220:72704-72723 | None:intergenic | 55.0% | |
| ! | ATTTGGCTAGCCAGGGTGAG+AGG | - | tig0016220:73670-73689 | Msa1357950:CDS | 55.0% |
| GTGCATGAATCCTCTCACCC+TGG | + | tig0016220:73683-73702 | None:intergenic | 55.0% | |
| GTCCGTTTCTCGGTGGAGGA+AGG | - | tig0016220:71447-71466 | Msa1357950:CDS | 60.0% | |
| CTCGGTGGAGGAAGGGTTGT+TGG | - | tig0016220:71455-71474 | Msa1357950:CDS | 60.0% | |
| GGTGGAGGAAGGGTTGTTGG+CGG | - | tig0016220:71458-71477 | Msa1357950:CDS | 60.0% | |
| CTCCACAGCGTTCAGCGGTA+TGG | + | tig0016220:72284-72303 | None:intergenic | 60.0% | |
| TACCGCTGAACGCTGTGGAG+AGG | - | tig0016220:72284-72303 | Msa1357950:CDS | 60.0% | |
| CCTACTGTGAGGACTGTGGC+AGG | + | tig0016220:72700-72719 | None:intergenic | 60.0% | |
| CCTGCCACAGTCCTCACAGT+AGG | - | tig0016220:72697-72716 | Msa1357950:CDS | 60.0% | |
| AACATAGTGGCAGCGCGGCT+CGG | - | tig0016220:73021-73040 | Msa1357950:CDS | 60.0% | |
| ATGGAGCATGCGCCGTAGCA+AGG | - | tig0016220:73107-73126 | Msa1357950:CDS | 60.0% | |
| ! | GATCGTTTGAGGAGCGTGGC+TGG | - | tig0016220:73624-73643 | Msa1357950:CDS | 60.0% |
| GTAGCAGGCGTGCTGTCCAC+AGG | + | tig0016220:71965-71984 | None:intergenic | 65.0% | |
| CGCCTCTCCACAGCGTTCAG+CGG | + | tig0016220:72289-72308 | None:intergenic | 65.0% | |
| ! | GAACGCTGTGGAGAGGCGTG+CGG | - | tig0016220:72291-72310 | Msa1357950:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016220 | gene | 70723 | 73911 | 70723 | ID=Msa1357950;Name=Msa1357950 |
| tig0016220 | mRNA | 70723 | 73911 | 70723 | ID=Msa1357950-mRNA-1;Parent=Msa1357950;Name=Msa1357950-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|1007 |
| tig0016220 | exon | 71309 | 73911 | 71309 | ID=Msa1357950-mRNA-1:exon:10544;Parent=Msa1357950-mRNA-1 |
| tig0016220 | exon | 70723 | 71143 | 70723 | ID=Msa1357950-mRNA-1:exon:10543;Parent=Msa1357950-mRNA-1 |
| tig0016220 | CDS | 71309 | 73911 | 71309 | ID=Msa1357950-mRNA-1:cds;Parent=Msa1357950-mRNA-1 |
| tig0016220 | CDS | 70723 | 71143 | 70723 | ID=Msa1357950-mRNA-1:cds;Parent=Msa1357950-mRNA-1 |
| Gene Sequence |
| Protein sequence |