Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0753230 | sp|Q9M2R0|FTIP3_ARATH | 70.013 | 777 | 222 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0753230 | G7KC44 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2079 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0689180 | Msa0753230 | 0.869111 | 3.953871e-66 | -8.615850e-47 |
Msa0753230 | Msa0795490 | 0.971731 | 1.257081e-133 | -8.615850e-47 |
Msa0753230 | Msa1021620 | 0.803367 | 3.606628e-49 | -8.615850e-47 |
Msa0753230 | Msa1357950 | 0.973903 | 3.180423e-137 | -8.615850e-47 |
Msa0753230 | Msa1358170 | 0.872742 | 2.516634e-67 | -8.615850e-47 |
Msa0753230 | Msa1411480 | 0.979230 | 1.628192e-147 | -8.615850e-47 |
Msa0147680 | Msa0753230 | 0.813551 | 2.417183e-51 | -8.615850e-47 |
Msa0252880 | Msa0753230 | 0.801238 | 9.895316e-49 | -8.615850e-47 |
Msa0291090 | Msa0753230 | 0.808089 | 3.675684e-50 | -8.615850e-47 |
Msa0329650 | Msa0753230 | 0.811532 | 6.680688e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0753230 | MtrunA17_Chr5g0397601 | 99.404 | 1007 | 6 | 0 | 1 | 1007 | 1 | 1007 | 0.0 | 2079 |
Msa0753230 | MtrunA17_Chr8g0349231 | 64.075 | 1016 | 343 | 12 | 1 | 1007 | 1 | 1003 | 0.0 | 1344 |
Msa0753230 | MtrunA17_Chr7g0258331 | 69.063 | 779 | 228 | 6 | 233 | 1007 | 6 | 775 | 0.0 | 1155 |
Msa0753230 | MtrunA17_Chr1g0174761 | 68.597 | 777 | 234 | 4 | 233 | 1007 | 6 | 774 | 0.0 | 1136 |
Msa0753230 | MtrunA17_Chr4g0033151 | 67.658 | 773 | 239 | 4 | 235 | 1007 | 9 | 770 | 0.0 | 1123 |
Msa0753230 | MtrunA17_Chr1g0174581 | 62.389 | 787 | 279 | 6 | 235 | 1007 | 14 | 797 | 0.0 | 1066 |
Msa0753230 | MtrunA17_Chr4g0010751 | 64.465 | 757 | 257 | 6 | 259 | 1007 | 442 | 1194 | 0.0 | 1056 |
Msa0753230 | MtrunA17_Chr4g0010751 | 32.673 | 202 | 135 | 1 | 4 | 204 | 1 | 202 | 3.41e-25 | 113 |
Msa0753230 | MtrunA17_Chr3g0087501 | 62.453 | 791 | 276 | 9 | 235 | 1007 | 35 | 822 | 0.0 | 1054 |
Msa0753230 | MtrunA17_Chr4g0014711 | 62.532 | 782 | 277 | 9 | 232 | 1007 | 273 | 1044 | 0.0 | 1028 |
Msa0753230 | MtrunA17_Chr4g0014711 | 37.121 | 132 | 74 | 3 | 5 | 133 | 3 | 128 | 3.31e-16 | 84.0 |
Msa0753230 | MtrunA17_Chr7g0247271 | 64.358 | 693 | 229 | 7 | 326 | 1007 | 281 | 966 | 0.0 | 934 |
Msa0753230 | MtrunA17_Chr7g0247271 | 31.597 | 595 | 322 | 21 | 1 | 527 | 78 | 655 | 9.10e-60 | 222 |
Msa0753230 | MtrunA17_Chr4g0060191 | 51.643 | 761 | 325 | 12 | 265 | 1007 | 303 | 1038 | 0.0 | 787 |
Msa0753230 | MtrunA17_Chr4g0060191 | 49.242 | 132 | 63 | 1 | 5 | 132 | 18 | 149 | 3.40e-30 | 129 |
Msa0753230 | MtrunA17_Chr4g0028371 | 50.570 | 789 | 359 | 10 | 232 | 1007 | 13 | 783 | 0.0 | 785 |
Msa0753230 | MtrunA17_Chr6g0461151 | 50.262 | 764 | 340 | 13 | 263 | 1007 | 284 | 1026 | 0.0 | 774 |
Msa0753230 | MtrunA17_Chr6g0461151 | 38.760 | 129 | 77 | 1 | 5 | 131 | 6 | 134 | 6.67e-22 | 102 |
Msa0753230 | MtrunA17_Chr6g0460791 | 49.017 | 763 | 342 | 13 | 265 | 1007 | 274 | 1009 | 0.0 | 752 |
Msa0753230 | MtrunA17_Chr6g0460791 | 44.961 | 129 | 70 | 1 | 5 | 132 | 11 | 139 | 4.85e-29 | 125 |
Msa0753230 | MtrunA17_Chr4g0035961 | 47.964 | 786 | 327 | 11 | 235 | 1007 | 16 | 732 | 0.0 | 748 |
Msa0753230 | MtrunA17_Chr1g0151051 | 42.060 | 806 | 430 | 14 | 221 | 1007 | 11 | 798 | 0.0 | 624 |
Msa0753230 | MtrunA17_Chr5g0447321 | 38.462 | 793 | 442 | 15 | 230 | 1007 | 2 | 763 | 0.0 | 551 |
Msa0753230 | MtrunA17_Chr4g0010641 | 60.769 | 130 | 49 | 1 | 877 | 1006 | 1 | 128 | 8.59e-49 | 169 |
Msa0753230 | MtrunA17_Chr6g0461171 | 39.535 | 129 | 76 | 1 | 5 | 131 | 6 | 134 | 2.08e-25 | 105 |
Msa0753230 | MtrunA17_Chr4g0010701 | 44.231 | 104 | 36 | 2 | 880 | 983 | 16 | 97 | 2.63e-20 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0753230 | AT4G11610.2 | 75.636 | 1022 | 217 | 8 | 1 | 1007 | 3 | 1007 | 0.0 | 1625 |
Msa0753230 | AT4G11610.1 | 75.440 | 1022 | 223 | 8 | 1 | 1007 | 3 | 1011 | 0.0 | 1623 |
Msa0753230 | AT4G11610.3 | 77.093 | 860 | 179 | 6 | 163 | 1007 | 18 | 874 | 0.0 | 1403 |
Msa0753230 | AT4G00700.1 | 56.500 | 1023 | 412 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1186 |
Msa0753230 | AT4G00700.2 | 56.500 | 1023 | 412 | 10 | 1 | 1007 | 1 | 1006 | 0.0 | 1186 |
Msa0753230 | AT3G57880.4 | 70.013 | 777 | 222 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa0753230 | AT3G57880.2 | 70.013 | 777 | 222 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa0753230 | AT3G57880.3 | 70.013 | 777 | 222 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa0753230 | AT3G57880.1 | 70.013 | 777 | 222 | 6 | 233 | 1007 | 6 | 773 | 0.0 | 1173 |
Msa0753230 | AT5G12970.1 | 69.716 | 776 | 223 | 4 | 232 | 1007 | 6 | 769 | 0.0 | 1151 |
Msa0753230 | AT1G51570.1 | 68.806 | 779 | 231 | 5 | 233 | 1007 | 6 | 776 | 0.0 | 1149 |
Msa0753230 | AT1G22610.1 | 54.932 | 1034 | 428 | 14 | 5 | 1007 | 3 | 1029 | 0.0 | 1136 |
Msa0753230 | AT5G48060.1 | 53.104 | 1047 | 431 | 14 | 5 | 1007 | 6 | 1036 | 0.0 | 1105 |
Msa0753230 | AT3G61300.1 | 53.585 | 1032 | 393 | 22 | 1 | 1007 | 2 | 972 | 0.0 | 1100 |
Msa0753230 | AT5G06850.1 | 62.341 | 786 | 280 | 6 | 235 | 1007 | 12 | 794 | 0.0 | 1077 |
Msa0753230 | AT1G04150.1 | 51.888 | 1033 | 439 | 18 | 3 | 1007 | 10 | 1012 | 0.0 | 1037 |
Msa0753230 | AT1G74720.1 | 43.630 | 1091 | 506 | 21 | 2 | 1007 | 15 | 1081 | 0.0 | 884 |
Msa0753230 | AT4G20080.1 | 54.557 | 779 | 328 | 10 | 236 | 1007 | 15 | 774 | 0.0 | 867 |
Msa0753230 | AT5G17980.1 | 49.868 | 758 | 345 | 13 | 263 | 1007 | 314 | 1049 | 0.0 | 775 |
Msa0753230 | AT5G17980.1 | 39.716 | 141 | 79 | 3 | 5 | 139 | 6 | 146 | 1.96e-22 | 104 |
Msa0753230 | AT3G03680.1 | 49.613 | 776 | 326 | 20 | 265 | 1007 | 274 | 1017 | 0.0 | 762 |
Msa0753230 | AT3G03680.1 | 41.406 | 128 | 75 | 0 | 5 | 132 | 8 | 135 | 2.14e-26 | 117 |
Msa0753230 | AT3G61720.1 | 38.300 | 812 | 439 | 22 | 235 | 1007 | 7 | 795 | 8.33e-160 | 491 |
Msa0753230 | AT5G03435.1 | 40.385 | 780 | 404 | 25 | 235 | 1000 | 7 | 739 | 1.41e-156 | 481 |
Msa0753230 | AT5G03435.2 | 42.586 | 580 | 296 | 16 | 235 | 807 | 7 | 556 | 2.76e-129 | 403 |
Msa0753230 | AT5G44760.1 | 46.798 | 406 | 165 | 10 | 235 | 635 | 5 | 364 | 1.56e-107 | 343 |
Msa0753230 | AT1G03370.2 | 36.885 | 122 | 73 | 2 | 274 | 393 | 3 | 122 | 1.66e-14 | 78.6 |
Msa0753230 | AT1G03370.1 | 36.885 | 122 | 73 | 2 | 274 | 393 | 3 | 122 | 2.05e-14 | 78.6 |
Find 233 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAACAAAGACTTGAAAAT+TGG | 0.180427 | 5_2:-6927059 | Msa0753230:CDS |
CCCAACTGGTGTTAAGAAAA+TGG | 0.211222 | 5_2:-6926961 | Msa0753230:CDS |
AGAAGAGCCTTCTCCATCTT+TGG | 0.233433 | 5_2:+6929041 | None:intergenic |
TCAGCACTTGGCTTCCTATC+TGG | 0.234328 | 5_2:+6927705 | None:intergenic |
CTATCTGGTGGAACTCTTAA+AGG | 0.240838 | 5_2:+6928013 | None:intergenic |
ATTATGATCAACTTAAAGTT+AGG | 0.248856 | 5_2:-6929096 | Msa0753230:CDS |
GGCTCGTGAGCTTCCTTCTA+TGG | 0.253047 | 5_2:-6928254 | Msa0753230:CDS |
CGGAAGCCTGTTTCGAAATC+TGG | 0.258205 | 5_2:+6925984 | None:intergenic |
ACTAACTCAAGTTCATTTCT+TGG | 0.266395 | 5_2:-6928853 | Msa0753230:CDS |
GTGTATTGCTCGTTGTATTT+TGG | 0.268384 | 5_2:+6927158 | None:intergenic |
TAATGGTTGTTCGAAACTTT+TGG | 0.275614 | 5_2:+6928989 | None:intergenic |
TCTCATGTTGGTTTGCTTCC+CGG | 0.299961 | 5_2:-6926571 | Msa0753230:CDS |
TTTCTGTTTGTTAGCTGCTT+TGG | 0.314831 | 5_2:-6926070 | Msa0753230:CDS |
TGCCGTTGATGGTTTGTGTT+AGG | 0.316788 | 5_2:+6928550 | None:intergenic |
CTCGGTGGAGGAAGGGTTGT+TGG | 0.318759 | 5_2:-6928361 | Msa0753230:CDS |
TGAACTTGAGTTAGTAGCTT+TGG | 0.320839 | 5_2:+6928861 | None:intergenic |
GTGTGTTTGCAGTTGGAAAA+TGG | 0.332879 | 5_2:-6926653 | Msa0753230:CDS |
ATCGTCAAGGCGATACCATT+CGG | 0.343035 | 5_2:+6927979 | None:intergenic |
TTTCTCTACCTATTCTTGAT+AGG | 0.343636 | 5_2:-6926528 | Msa0753230:CDS |
CTGATTCTTATCATAGTGTT+TGG | 0.343905 | 5_2:+6928171 | None:intergenic |
AAGAAAGGGGAGAAAGTTAA+AGG | 0.345361 | 5_2:-6927956 | Msa0753230:CDS |
AAAAGGATCTTAATCCTGTT+TGG | 0.345946 | 5_2:-6928963 | Msa0753230:CDS |
TGATAGGTGTATGGAACTTC+AGG | 0.347349 | 5_2:-6926512 | Msa0753230:intron |
GTTGATGCTGATGCCGTTGA+TGG | 0.350294 | 5_2:+6928539 | None:intergenic |
TGAAGATCATGTAATACTTT+CGG | 0.351594 | 5_2:-6927606 | Msa0753230:CDS |
TGAACAAGGACTGTTGTAAT+AGG | 0.354570 | 5_2:+6926603 | None:intergenic |
CTTCCTTCTATGGATCTTAC+CGG | 0.373034 | 5_2:-6928244 | Msa0753230:CDS |
CAGATGTTGACTCACATCTA+TGG | 0.373205 | 5_2:-6926728 | Msa0753230:CDS |
GGCATCCCAGATTTCGAAAC+AGG | 0.373780 | 5_2:-6925990 | Msa0753230:CDS |
TTGCTTGTTCTTCACCCAAC+TGG | 0.374868 | 5_2:-6926975 | Msa0753230:CDS |
TCGGGTGCCAAAGGACTATC+TGG | 0.383261 | 5_2:+6927998 | None:intergenic |
ACAAACGGTTGTAGGTGATT+TGG | 0.383411 | 5_2:-6926163 | Msa0753230:CDS |
GAAGAGCCTTCTCCATCTTT+GGG | 0.384950 | 5_2:+6929042 | None:intergenic |
TTCCCAAATCAGTGGTGAAA+AGG | 0.392570 | 5_2:-6927084 | Msa0753230:CDS |
CAAATGGTGGCTGGTTTAGC+AGG | 0.392665 | 5_2:-6926027 | Msa0753230:CDS |
CCATTTGTTGAGGTGAGAAT+TGG | 0.401775 | 5_2:-6928211 | Msa0753230:CDS |
ATAGAATCATTCATTCTAGA+TGG | 0.401919 | 5_2:-6927499 | Msa0753230:CDS |
TCGTCAAGGCGATACCATTC+GGG | 0.407136 | 5_2:+6927980 | None:intergenic |
TAGCAAAATACGGTCACAAA+TGG | 0.411100 | 5_2:-6927214 | Msa0753230:CDS |
TGTAGGTGATTTGGCTAGCC+AGG | 0.412061 | 5_2:-6926154 | Msa0753230:CDS |
CCAATTCTCACCTCAACAAA+TGG | 0.417160 | 5_2:+6928211 | None:intergenic |
AAAGATCTTCATTCCATTGT+GGG | 0.420444 | 5_2:+6927651 | None:intergenic |
TGATCAACATCCACGGCAAC+AGG | 0.421658 | 5_2:+6927461 | None:intergenic |
TACCGCATTCTTACAAGGTC+AGG | 0.427894 | 5_2:+6926216 | None:intergenic |
AAGGACTCAACAGAAGGATT+TGG | 0.428137 | 5_2:+6928676 | None:intergenic |
GTGAGTTGATGCTAGCTGTT+TGG | 0.429438 | 5_2:-6927934 | Msa0753230:CDS |
TTATGATCAACTTAAAGTTA+GGG | 0.431458 | 5_2:-6929095 | Msa0753230:CDS |
AATTCCTCATCCATTTCATC+GGG | 0.432095 | 5_2:+6926264 | None:intergenic |
AACATACTATCAGTTCTTGC+AGG | 0.433599 | 5_2:+6925931 | None:intergenic |
TCATGTGTTGTTTCTCATGT+TGG | 0.437544 | 5_2:-6926583 | Msa0753230:CDS |
TCAGAATCCGGAGTGGCATC+AGG | 0.438503 | 5_2:-6928152 | Msa0753230:CDS |
TCTTTAAGTGCAAAATCAAC+CGG | 0.439305 | 5_2:+6928397 | None:intergenic |
CCGGGAAAAGATGAGATCAT+TGG | 0.439731 | 5_2:-6927566 | Msa0753230:CDS |
AAAGAAACAAGTCCGTTTCT+CGG | 0.443107 | 5_2:-6928379 | Msa0753230:CDS |
TCGAACAACCATTAAAGAAA+AGG | 0.443124 | 5_2:-6928980 | Msa0753230:CDS |
CTCAGTTACATCACTACAAC+CGG | 0.443547 | 5_2:-6928416 | Msa0753230:CDS |
GGTTGAAGATCGAGTTGGTC+CGG | 0.444254 | 5_2:-6927585 | Msa0753230:CDS |
CGCATATCGACTCTTGAAAC+AGG | 0.446486 | 5_2:-6927023 | Msa0753230:CDS |
ACTTCAGCATGATTATTTGT+TGG | 0.446986 | 5_2:+6928652 | None:intergenic |
TTCATGTGTGGAGGGTATCT+TGG | 0.447757 | 5_2:+6926318 | None:intergenic |
ACAACAAAGACTTGAAAATT+GGG | 0.452516 | 5_2:-6927058 | Msa0753230:CDS |
ACCTATTCTTGATAGGTGTA+TGG | 0.457302 | 5_2:-6926521 | Msa0753230:CDS |
AATTCAGCTACGGCTATGTC+TGG | 0.461073 | 5_2:-6927411 | Msa0753230:CDS |
CCGAGTTCTAAAACACCAAT+TGG | 0.462500 | 5_2:+6927308 | None:intergenic |
GCCCCACTGCAAAACAGTTA+TGG | 0.464071 | 5_2:-6927337 | Msa0753230:CDS |
CCAACTGGTGTTAAGAAAAT+GGG | 0.464187 | 5_2:-6926960 | Msa0753230:CDS |
GTTGAAGATCGAGTTGGTCC+GGG | 0.464534 | 5_2:-6927584 | Msa0753230:CDS |
TAGAAGCTCTCATTCCAAAC+AGG | 0.467298 | 5_2:+6928949 | None:intergenic |
AAGAGTGAGATAGTGAAGAT+TGG | 0.467768 | 5_2:+6928906 | None:intergenic |
GGATTCATGCACTGTTGAGC+TGG | 0.468052 | 5_2:-6926125 | Msa0753230:CDS |
CTCGGAGTGCTGAATGCAAT+AGG | 0.474307 | 5_2:-6927290 | Msa0753230:CDS |
CGGGAAAAGATGAGATCATT+GGG | 0.475103 | 5_2:-6927565 | Msa0753230:CDS |
TCTATCATGCTCCGAGGTTG+TGG | 0.475877 | 5_2:-6927808 | Msa0753230:CDS |
ACCCTTCCTCCACCGAGAAA+CGG | 0.478302 | 5_2:+6928367 | None:intergenic |
CTTGGCAAAGTTAGCCTCAC+AGG | 0.478373 | 5_2:-6928835 | Msa0753230:CDS |
TCCCAAATCAGTGGTGAAAA+GGG | 0.479687 | 5_2:-6927083 | Msa0753230:CDS |
GCCGTTGATGGTTTGTGTTA+GGG | 0.479912 | 5_2:+6928551 | None:intergenic |
AGCATGATTATTTGTTGGCA+AGG | 0.480052 | 5_2:+6928657 | None:intergenic |
TGACATATGCATCCGGGAAA+CGG | 0.482033 | 5_2:+6927732 | None:intergenic |
GCATATGTCAAGGTCCAGAT+AGG | 0.486634 | 5_2:-6927719 | Msa0753230:CDS |
CTCCACAGCGTTCAGTGGTA+TGG | 0.488828 | 5_2:+6927535 | None:intergenic |
AACAGAAGGATTTGGAATTG+AGG | 0.489461 | 5_2:+6928684 | None:intergenic |
GTGAGATAGTGAAGATTGGA+AGG | 0.490145 | 5_2:+6928910 | None:intergenic |
GTCCGTTTCTCGGTGGAGGA+AGG | 0.491607 | 5_2:-6928369 | Msa0753230:CDS |
ACATATTGTGTAGCAAAATA+CGG | 0.491890 | 5_2:-6927224 | Msa0753230:CDS |
TGTAGTACACCCCGATGAAA+TGG | 0.494237 | 5_2:-6926274 | Msa0753230:CDS |
TGGACCTTGACATATGCATC+CGG | 0.494944 | 5_2:+6927725 | None:intergenic |
AGTTCCACCAGATAGTCCTT+TGG | 0.496430 | 5_2:-6928005 | Msa0753230:CDS |
GGTAGAATACAAACGGTTGT+AGG | 0.496800 | 5_2:-6926171 | Msa0753230:CDS |
GATCGTTTGAGGAGCGTGGC+TGG | 0.499227 | 5_2:-6926192 | Msa0753230:CDS |
CTGCCACTATGTTTACTGCT+TGG | 0.501177 | 5_2:+6926805 | None:intergenic |
AAATTCCTCATCCATTTCAT+CGG | 0.503321 | 5_2:+6926263 | None:intergenic |
CCTACGGGTTCAATGATGAA+TGG | 0.504774 | 5_2:-6928622 | Msa0753230:CDS |
AGTATTACATGATCTTCAAA+AGG | 0.505539 | 5_2:+6927611 | None:intergenic |
TCATTCTAGATGGTTCAACT+TGG | 0.507484 | 5_2:-6927489 | Msa0753230:CDS |
CGTATCACTGTCGTAGTAGC+AGG | 0.507663 | 5_2:+6927839 | None:intergenic |
ATCGCCTTGACGATAAGAAA+GGG | 0.511259 | 5_2:-6927970 | Msa0753230:CDS |
AACATAGTGGCAGCGCGGCT+CGG | 0.511333 | 5_2:-6926795 | Msa0753230:CDS |
GCTGAAGTCCACGGACCTAC+GGG | 0.511884 | 5_2:-6928637 | Msa0753230:CDS |
GGAAGCCTGTTTCGAAATCT+GGG | 0.513817 | 5_2:+6925985 | None:intergenic |
TTTGCAGTTGGAAAATGGTT+AGG | 0.514024 | 5_2:-6926648 | Msa0753230:CDS |
TGTACTAGAAGTTGTGATCA+AGG | 0.515018 | 5_2:-6928095 | Msa0753230:CDS |
AAAAGATCTTCATTCCATTG+TGG | 0.517456 | 5_2:+6927650 | None:intergenic |
CAGTTATGGAGGCCACCAAT+TGG | 0.517888 | 5_2:-6927323 | Msa0753230:CDS |
GAAAGAAGTTTGCCTTGCTA+CGG | 0.518974 | 5_2:+6926697 | None:intergenic |
TTTGTATGTCAGGGTCGTTA+AGG | 0.519023 | 5_2:-6928275 | Msa0753230:CDS |
AAACCAGCCACCATTTGAAA+AGG | 0.520236 | 5_2:+6926033 | None:intergenic |
ACAAGTCCGTTTCTCGGTGG+AGG | 0.522181 | 5_2:-6928373 | Msa0753230:CDS |
TCCCGAAAATGCATTACGTT+AGG | 0.522411 | 5_2:-6926863 | Msa0753230:CDS |
TGTACTAGCTTCATAGGTTG+TGG | 0.523049 | 5_2:+6928445 | None:intergenic |
TGCATGTGTACTAGCTTCAT+AGG | 0.523340 | 5_2:+6928439 | None:intergenic |
AGCAAAATACGGTCACAAAT+GGG | 0.523407 | 5_2:-6927213 | Msa0753230:CDS |
CACAATCTACTACCCAAAGA+TGG | 0.523857 | 5_2:-6929054 | Msa0753230:CDS |
TTTGTAGAACTTTACTTCGA+CGG | 0.525442 | 5_2:-6929012 | Msa0753230:CDS |
CTCCCGGTAAGATCCATAGA+AGG | 0.525748 | 5_2:+6928241 | None:intergenic |
TGCTGAAGTCCACGGACCTA+CGG | 0.525914 | 5_2:-6928638 | Msa0753230:CDS |
CTATGATAAGAATCAGAATC+CGG | 0.528818 | 5_2:-6928164 | Msa0753230:CDS |
TCCGTTTCTCGGTGGAGGAA+GGG | 0.529722 | 5_2:-6928368 | Msa0753230:CDS |
TAGTAGCTTTGGAATGGCAG+TGG | 0.529952 | 5_2:+6928872 | None:intergenic |
ATTTCATCAGCTTCATACTT+CGG | 0.537653 | 5_2:+6928481 | None:intergenic |
GAATGCGGTATGATCGTTTG+AGG | 0.538021 | 5_2:-6926203 | Msa0753230:CDS |
TCTCGTGTAAGAGGTGAGCT+TGG | 0.541487 | 5_2:-6928745 | Msa0753230:CDS |
TTGATGCTAGCTGTTTGGAT+TGG | 0.541583 | 5_2:-6927929 | Msa0753230:CDS |
GAGTCTTGATCCATTTGTTG+AGG | 0.542333 | 5_2:-6928221 | Msa0753230:CDS |
TACATGATCTTCAAAAGGCT+CGG | 0.542481 | 5_2:+6927616 | None:intergenic |
TCCATACACCTATCAAGAAT+AGG | 0.544412 | 5_2:+6926520 | None:intergenic |
TCTCCCCTTTCTTATCGTCA+AGG | 0.547579 | 5_2:+6927966 | None:intergenic |
TATCGCCTTGACGATAAGAA+AGG | 0.548988 | 5_2:-6927971 | Msa0753230:CDS |
GGTGGAGGAAGGGTTGTTGG+CGG | 0.552425 | 5_2:-6928358 | Msa0753230:CDS |
AAGTTAGGGGTAGATGTGGT+TGG | 0.552972 | 5_2:-6929081 | Msa0753230:CDS |
TTGAGTTAGTAGCTTTGGAA+TGG | 0.553431 | 5_2:+6928866 | None:intergenic |
AAGAAGTTGATCGGTGCAGA+CGG | 0.553790 | 5_2:+6925964 | None:intergenic |
GATCATACCGCATTCTTACA+AGG | 0.554571 | 5_2:+6926211 | None:intergenic |
GTAGGTGATTTGGCTAGCCA+GGG | 0.554831 | 5_2:-6926153 | Msa0753230:CDS |
TGTGGGTTTAGAGTTCTAGC+AGG | 0.559920 | 5_2:+6927668 | None:intergenic |
GTGTAGGCAAAATCAACTCC+GGG | 0.562576 | 5_2:+6926553 | None:intergenic |
ATGGAGCATGCGCCGTAGCA+AGG | 0.566672 | 5_2:-6926709 | Msa0753230:CDS |
AACTAGATCATATGTACTTG+CGG | 0.568364 | 5_2:+6928312 | None:intergenic |
CGCCTCTCCACAGCGTTCAG+TGG | 0.568730 | 5_2:+6927530 | None:intergenic |
TTCTTGTGTTCATGTGTGGA+GGG | 0.569126 | 5_2:+6926310 | None:intergenic |
ATTCTTGTGTTCATGTGTGG+AGG | 0.569293 | 5_2:+6926309 | None:intergenic |
AAGACAACTGCATCAGCTTG+AGG | 0.569540 | 5_2:+6928799 | None:intergenic |
AGTGTAGGCAAAATCAACTC+CGG | 0.570441 | 5_2:+6926552 | None:intergenic |
ATTTGGCTAGCCAGGGTGAG+AGG | 0.571757 | 5_2:-6926146 | Msa0753230:CDS |
CAGCATCAACAACACTCCAC+TGG | 0.572183 | 5_2:-6928526 | Msa0753230:CDS |
CTTAAAGTTAGGGGTAGATG+TGG | 0.572186 | 5_2:-6929085 | Msa0753230:CDS |
CTTTCGGTTGAAGATCGAGT+TGG | 0.574501 | 5_2:-6927590 | Msa0753230:CDS |
AGACAACTGCATCAGCTTGA+GGG | 0.574535 | 5_2:+6928800 | None:intergenic |
AACAAATGGATCAAGACTCC+CGG | 0.576070 | 5_2:+6928225 | None:intergenic |
CGTGGCTGGTAGAATACAAA+CGG | 0.577843 | 5_2:-6926178 | Msa0753230:CDS |
TTCCTTCTATGGATCTTACC+GGG | 0.579035 | 5_2:-6928243 | Msa0753230:CDS |
GTTGGCAAGGACTCAACAGA+AGG | 0.579568 | 5_2:+6928670 | None:intergenic |
ACTATCCGTTGGAAAAGCGC+GGG | 0.579782 | 5_2:-6928774 | Msa0753230:CDS |
CCTACTGTGAGGACTGTGGC+AGG | 0.580485 | 5_2:+6927119 | None:intergenic |
CACTATCCGTTGGAAAAGCG+CGG | 0.582031 | 5_2:-6928775 | Msa0753230:CDS |
TAGCAGGTTTCTATTTCATG+AGG | 0.582086 | 5_2:-6926011 | Msa0753230:CDS |
CGATACCATTCGGGTGCCAA+AGG | 0.582226 | 5_2:+6927989 | None:intergenic |
CTACTACCCAAAGATGGAGA+AGG | 0.583168 | 5_2:-6929048 | Msa0753230:CDS |
AGTTGTCTTGCACTATCCGT+TGG | 0.586747 | 5_2:-6928785 | Msa0753230:CDS |
CAGTTCTTGCAGGAAGTCGA+CGG | 0.588288 | 5_2:+6925941 | None:intergenic |
ACCACTTCTTTACGAAGCGG+TGG | 0.588806 | 5_2:+6926762 | None:intergenic |
GAGATTCTTGTGTTCATGTG+TGG | 0.591639 | 5_2:+6926306 | None:intergenic |
TTCAGATGCAGCTTCACCTG+TGG | 0.591854 | 5_2:-6927870 | Msa0753230:CDS |
TACGACAGTGATACGTTCAA+AGG | 0.595585 | 5_2:-6927831 | Msa0753230:CDS |
GACTCCACCCAATGAAAACA+AGG | 0.596227 | 5_2:-6927268 | Msa0753230:CDS |
TCGAGTTGCATGACTGCGAA+TGG | 0.597451 | 5_2:+6926840 | None:intergenic |
CTTGGAAAAGCCTGTTGCCG+TGG | 0.598251 | 5_2:-6927471 | Msa0753230:CDS |
ACCGCTTCGTAAAGAAGTGG+TGG | 0.601145 | 5_2:-6926760 | Msa0753230:CDS |
AGTTCTAAAACACCAATTGG+TGG | 0.601566 | 5_2:+6927311 | None:intergenic |
GTGCATGAATCCTCTCACCC+TGG | 0.601936 | 5_2:+6926136 | None:intergenic |
TTGCAAGCAGAATTCAGCTA+CGG | 0.601937 | 5_2:-6927421 | Msa0753230:CDS |
GTACATATGATCTAGTTGAA+AGG | 0.603113 | 5_2:-6928306 | Msa0753230:CDS |
TCCCTAACACAAACCATCAA+CGG | 0.603684 | 5_2:-6928552 | Msa0753230:CDS |
CAGCTACGGCTATGTCTGGA+TGG | 0.603841 | 5_2:-6927407 | Msa0753230:CDS |
GAAAATGGGAGAACTTCACT+TGG | 0.605162 | 5_2:-6926946 | Msa0753230:CDS |
ACACCCCGATGAAATGGATG+AGG | 0.606414 | 5_2:-6926268 | Msa0753230:CDS |
TATGATCAACTTAAAGTTAG+GGG | 0.607138 | 5_2:-6929094 | Msa0753230:CDS |
TGTGTGGAGGGTATCTTGGT+CGG | 0.608323 | 5_2:+6926322 | None:intergenic |
GGACCTTGACATATGCATCC+GGG | 0.608916 | 5_2:+6927726 | None:intergenic |
TCCACCACTTCTTTACGAAG+CGG | 0.610176 | 5_2:+6926759 | None:intergenic |
GTCACAAATGGGTCAGAACA+AGG | 0.610662 | 5_2:-6927202 | Msa0753230:CDS |
ATGAAAACAAGGGATGGTAG+AGG | 0.612015 | 5_2:-6927257 | Msa0753230:CDS |
CTAGAACTCTAAACCCACAA+TGG | 0.614323 | 5_2:-6927664 | Msa0753230:CDS |
CAAAGACTTGAAAATTGGGA+AGG | 0.616941 | 5_2:-6927054 | Msa0753230:CDS |
GAATGGTTTGTCTCGTGACA+AGG | 0.617002 | 5_2:-6928605 | Msa0753230:CDS |
TCATTGAACCCGTAGGTCCG+TGG | 0.617562 | 5_2:+6928629 | None:intergenic |
CACCCAATGAAAACAAGGGA+TGG | 0.618631 | 5_2:-6927263 | Msa0753230:CDS |
CATGAACACAAGAATCTCAC+AGG | 0.619367 | 5_2:-6926301 | Msa0753230:CDS |
GTTGGGTGAAGAACAAGCAA+TGG | 0.619420 | 5_2:+6926978 | None:intergenic |
ATAGTCCTTTGGCACCCGAA+TGG | 0.620871 | 5_2:-6927994 | Msa0753230:CDS |
AATAATCATGCTGAAGTCCA+CGG | 0.626372 | 5_2:-6928646 | Msa0753230:CDS |
CCTGCCACAGTCCTCACAGT+AGG | 0.628716 | 5_2:-6927119 | Msa0753230:CDS |
GTGAGTATCTGCATATCCAG+TGG | 0.628850 | 5_2:+6928510 | None:intergenic |
TTTGACAATTCCCAAATCAG+TGG | 0.630492 | 5_2:-6927092 | Msa0753230:CDS |
ATCCTGACCTTGTAAGAATG+CGG | 0.634955 | 5_2:-6926218 | Msa0753230:CDS |
AATACAACGAGCAATACACT+TGG | 0.635555 | 5_2:-6927154 | Msa0753230:CDS |
TACCACTGAACGCTGTGGAG+AGG | 0.635845 | 5_2:-6927532 | Msa0753230:CDS |
AGCACAAGACTTGATTCCAA+CGG | 0.636163 | 5_2:-6927762 | Msa0753230:CDS |
AGTCGACGGAAGAAGTTGAT+CGG | 0.641660 | 5_2:+6925955 | None:intergenic |
CTTCAGCTGATCAACATCCA+CGG | 0.642798 | 5_2:+6927454 | None:intergenic |
GTCGAAGTAAAGTTCTACAA+AGG | 0.652130 | 5_2:+6929014 | None:intergenic |
TCACCAAGCAGTAAACATAG+TGG | 0.653759 | 5_2:-6926808 | Msa0753230:CDS |
GGTGCCAAAGGACTATCTGG+TGG | 0.654724 | 5_2:+6928001 | None:intergenic |
TACCATACCACTGAACGCTG+TGG | 0.655924 | 5_2:-6927537 | Msa0753230:CDS |
GTTGATGGTTTGTGTTAGGG+AGG | 0.657066 | 5_2:+6928554 | None:intergenic |
GCCACCGCTTCGTAAAGAAG+TGG | 0.658854 | 5_2:-6926763 | Msa0753230:CDS |
AAAAGATGAGATCATTGGGA+GGG | 0.659454 | 5_2:-6927561 | Msa0753230:CDS |
CCATTCATCATTGAACCCGT+AGG | 0.661796 | 5_2:+6928622 | None:intergenic |
TGAGAAACAACACATGAACA+AGG | 0.662150 | 5_2:+6926589 | None:intergenic |
CCACTGCAAAACAGTTATGG+AGG | 0.665722 | 5_2:-6927334 | Msa0753230:CDS |
GTGATGAAATGTGTGTCTTG+AGG | 0.667671 | 5_2:+6928576 | None:intergenic |
CTACGGCTATGTCTGGATGG+AGG | 0.669332 | 5_2:-6927404 | Msa0753230:CDS |
GTGAGAATTGGCAATTACAG+AGG | 0.669944 | 5_2:-6928199 | Msa0753230:CDS |
TTTCCCGGATGCATATGTCA+AGG | 0.673533 | 5_2:-6927729 | Msa0753230:CDS |
TCGCCTTGACGATAAGAAAG+GGG | 0.675420 | 5_2:-6927969 | Msa0753230:CDS |
GAACGCTGTGGAGAGGCGTG+CGG | 0.677133 | 5_2:-6927525 | Msa0753230:CDS |
GAAACAAGTCCGTTTCTCGG+TGG | 0.679691 | 5_2:-6928376 | Msa0753230:CDS |
GTATGATCGTTTGAGGAGCG+TGG | 0.680386 | 5_2:-6926196 | Msa0753230:CDS |
ACACGAACGTACCACAACCT+CGG | 0.680879 | 5_2:+6927797 | None:intergenic |
GGTTAGGTGATATTTGCATG+TGG | 0.684481 | 5_2:-6926632 | Msa0753230:CDS |
GAAAAGATGAGATCATTGGG+AGG | 0.684584 | 5_2:-6927562 | Msa0753230:CDS |
ATACAACGAGCAATACACTT+GGG | 0.691267 | 5_2:-6927153 | Msa0753230:CDS |
TATCGACTCTTGAAACAGGA+CGG | 0.694274 | 5_2:-6927019 | Msa0753230:CDS |
CAACGAGCAATACACTTGGG+AGG | 0.698127 | 5_2:-6927150 | Msa0753230:CDS |
ACTCCACCCAATGAAAACAA+GGG | 0.702014 | 5_2:-6927267 | Msa0753230:CDS |
GACACCTACTGTGAGGACTG+TGG | 0.709482 | 5_2:+6927115 | None:intergenic |
CAAAGGTCTATCATGCTCCG+AGG | 0.711392 | 5_2:-6927814 | Msa0753230:CDS |
ATGAATAAAGAAGTAGCACG+CGG | 0.714106 | 5_2:+6926096 | None:intergenic |
CAGTAAACATAGTGGCAGCG+CGG | 0.720769 | 5_2:-6926800 | Msa0753230:CDS |
TGTCAAAGACACCTACTGTG+AGG | 0.734255 | 5_2:+6927108 | None:intergenic |
ATAAGAATCAGAATCCGGAG+TGG | 0.742906 | 5_2:-6928159 | Msa0753230:CDS |
ATTCCTCATCCATTTCATCG+GGG | 0.747292 | 5_2:+6926265 | None:intergenic |
GGACAAAAGAAGTACCTGTG+AGG | 0.754029 | 5_2:+6928821 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAAGATCCTTTTCTTTAA+TGG | + | chr5_2:6926051-6926070 | None:intergenic | 20.0% |
!!! | TATCAGTGATGTAAATTTTA+AGG | + | chr5_2:6926301-6926320 | None:intergenic | 20.0% |
!! | TATGCAATCATGTATAAATA+GGG | + | chr5_2:6928595-6928614 | None:intergenic | 20.0% |
!! | ATATGCAATCATGTATAAAT+AGG | + | chr5_2:6928596-6928615 | None:intergenic | 20.0% |
!!! | ATTTGGAATTGAGGATTTTA+TGG | + | chr5_2:6926330-6926349 | None:intergenic | 25.0% |
!!! | GATGTATTTTTTGTATGTCA+GGG | - | chr5_2:6926736-6926755 | Msa0753230:CDS | 25.0% |
! | AGTATTACATGATCTTCAAA+AGG | + | chr5_2:6927412-6927431 | None:intergenic | 25.0% |
! | TGAAGATCATGTAATACTTT+CGG | - | chr5_2:6927414-6927433 | Msa0753230:CDS | 25.0% |
! | ATAGAATCATTCATTCTAGA+TGG | - | chr5_2:6927521-6927540 | Msa0753230:CDS | 25.0% |
! | ACATATTGTGTAGCAAAATA+CGG | - | chr5_2:6927796-6927815 | Msa0753230:CDS | 25.0% |
! | ACAACAAAGACTTGAAAATT+GGG | - | chr5_2:6927962-6927981 | Msa0753230:CDS | 25.0% |
! | CCTGATATTGAAAATAAAGT+TGG | + | chr5_2:6928676-6928695 | None:intergenic | 25.0% |
!!! | CCAACTTTATTTTCAATATC+AGG | - | chr5_2:6928673-6928692 | Msa0753230:CDS | 25.0% |
!! | ATATGTTACTCCTTTTCAAA+TGG | - | chr5_2:6928977-6928996 | Msa0753230:CDS | 25.0% |
TTTGTAGAACTTTACTTCGA+CGG | - | chr5_2:6926008-6926027 | Msa0753230:CDS | 30.0% | |
! | TAATGGTTGTTCGAAACTTT+TGG | + | chr5_2:6926034-6926053 | None:intergenic | 30.0% |
TCGAACAACCATTAAAGAAA+AGG | - | chr5_2:6926040-6926059 | Msa0753230:CDS | 30.0% | |
AAAAGGATCTTAATCCTGTT+TGG | - | chr5_2:6926057-6926076 | Msa0753230:CDS | 30.0% | |
ACTAACTCAAGTTCATTTCT+TGG | - | chr5_2:6926167-6926186 | Msa0753230:CDS | 30.0% | |
ACTTCAGCATGATTATTTGT+TGG | + | chr5_2:6926371-6926390 | None:intergenic | 30.0% | |
ATTTCATCAGCTTCATACTT+CGG | + | chr5_2:6926542-6926561 | None:intergenic | 30.0% | |
TCTTTAAGTGCAAAATCAAC+CGG | + | chr5_2:6926626-6926645 | None:intergenic | 30.0% | |
AACTAGATCATATGTACTTG+CGG | + | chr5_2:6926711-6926730 | None:intergenic | 30.0% | |
GTACATATGATCTAGTTGAA+AGG | - | chr5_2:6926714-6926733 | Msa0753230:CDS | 30.0% | |
!!! | GGATGTATTTTTTGTATGTC+AGG | - | chr5_2:6926735-6926754 | Msa0753230:CDS | 30.0% |
CTGATTCTTATCATAGTGTT+TGG | + | chr5_2:6926852-6926871 | None:intergenic | 30.0% | |
CTATGATAAGAATCAGAATC+CGG | - | chr5_2:6926856-6926875 | Msa0753230:CDS | 30.0% | |
! | TCAGGTTTTTGCATTTTCAA+AGG | - | chr5_2:6926886-6926905 | Msa0753230:CDS | 30.0% |
! | CTCATCAAAGATGATTTTGT+AGG | - | chr5_2:6926956-6926975 | Msa0753230:CDS | 30.0% |
!! | ATGATTTTGTAGGTATTGTG+AGG | - | chr5_2:6926966-6926985 | Msa0753230:CDS | 30.0% |
AAAGATCTTCATTCCATTGT+GGG | + | chr5_2:6927372-6927391 | None:intergenic | 30.0% | |
AAAAGATCTTCATTCCATTG+TGG | + | chr5_2:6927373-6927392 | None:intergenic | 30.0% | |
CACAACAAAGACTTGAAAAT+TGG | - | chr5_2:6927961-6927980 | Msa0753230:CDS | 30.0% | |
! | AATAGGTAGAGAAAAAGTGT+AGG | + | chr5_2:6928486-6928505 | None:intergenic | 30.0% |
TTTCTCTACCTATTCTTGAT+AGG | - | chr5_2:6928492-6928511 | Msa0753230:CDS | 30.0% | |
AAATTCCTCATCCATTTCAT+CGG | + | chr5_2:6928760-6928779 | None:intergenic | 30.0% | |
GTCGAAGTAAAGTTCTACAA+AGG | + | chr5_2:6926009-6926028 | None:intergenic | 35.0% | |
AAGAGTGAGATAGTGAAGAT+TGG | + | chr5_2:6926117-6926136 | None:intergenic | 35.0% | |
!! | TTGAGTTAGTAGCTTTGGAA+TGG | + | chr5_2:6926157-6926176 | None:intergenic | 35.0% |
TGAACTTGAGTTAGTAGCTT+TGG | + | chr5_2:6926162-6926181 | None:intergenic | 35.0% | |
! | GGAATTGAGGATTTTATGGT+TGG | + | chr5_2:6926326-6926345 | None:intergenic | 35.0% |
! | AACAGAAGGATTTGGAATTG+AGG | + | chr5_2:6926339-6926358 | None:intergenic | 35.0% |
! | AGCATGATTATTTGTTGGCA+AGG | + | chr5_2:6926366-6926385 | None:intergenic | 35.0% |
AATAATCATGCTGAAGTCCA+CGG | - | chr5_2:6926374-6926393 | Msa0753230:intron | 35.0% | |
AAAGAAACAAGTCCGTTTCT+CGG | - | chr5_2:6926641-6926660 | Msa0753230:CDS | 35.0% | |
TGTACTAGAAGTTGTGATCA+AGG | - | chr5_2:6926925-6926944 | Msa0753230:CDS | 35.0% | |
AAGAAAGGGGAGAAAGTTAA+AGG | - | chr5_2:6927064-6927083 | Msa0753230:CDS | 35.0% | |
!! | ATGAAGCATTTTCTGATGCA+TGG | - | chr5_2:6927125-6927144 | Msa0753230:CDS | 35.0% |
TACATGATCTTCAAAAGGCT+CGG | + | chr5_2:6927407-6927426 | None:intergenic | 35.0% | |
AAAAGATGAGATCATTGGGA+GGG | - | chr5_2:6927459-6927478 | Msa0753230:CDS | 35.0% | |
TCATTCTAGATGGTTCAACT+TGG | - | chr5_2:6927531-6927550 | Msa0753230:CDS | 35.0% | |
!! | AGTTCTAAAACACCAATTGG+TGG | + | chr5_2:6927712-6927731 | None:intergenic | 35.0% |
!!! | CCAATTGGTGTTTTAGAACT+CGG | - | chr5_2:6927712-6927731 | Msa0753230:CDS | 35.0% |
!!! | TACCATCCCTTGTTTTCATT+GGG | + | chr5_2:6927762-6927781 | None:intergenic | 35.0% |
TAGCAAAATACGGTCACAAA+TGG | - | chr5_2:6927806-6927825 | Msa0753230:CDS | 35.0% | |
AGCAAAATACGGTCACAAAT+GGG | - | chr5_2:6927807-6927826 | Msa0753230:CDS | 35.0% | |
! | GTGTATTGCTCGTTGTATTT+TGG | + | chr5_2:6927865-6927884 | None:intergenic | 35.0% |
AATACAACGAGCAATACACT+TGG | - | chr5_2:6927866-6927885 | Msa0753230:CDS | 35.0% | |
ATACAACGAGCAATACACTT+GGG | - | chr5_2:6927867-6927886 | Msa0753230:CDS | 35.0% | |
TTTGACAATTCCCAAATCAG+TGG | - | chr5_2:6927928-6927947 | Msa0753230:CDS | 35.0% | |
CAAAGACTTGAAAATTGGGA+AGG | - | chr5_2:6927966-6927985 | Msa0753230:CDS | 35.0% | |
! | CCATTTTCTTAACACCAGTT+GGG | + | chr5_2:6928062-6928081 | None:intergenic | 35.0% |
! | CCAACTGGTGTTAAGAAAAT+GGG | - | chr5_2:6928060-6928079 | Msa0753230:CDS | 35.0% |
TTTGCAGTTGGAAAATGGTT+AGG | - | chr5_2:6928372-6928391 | Msa0753230:CDS | 35.0% | |
TGAACAAGGACTGTTGTAAT+AGG | + | chr5_2:6928420-6928439 | None:intergenic | 35.0% | |
TGAGAAACAACACATGAACA+AGG | + | chr5_2:6928434-6928453 | None:intergenic | 35.0% | |
!! | TCATGTGTTGTTTCTCATGT+TGG | - | chr5_2:6928437-6928456 | Msa0753230:CDS | 35.0% |
ACCTATTCTTGATAGGTGTA+TGG | - | chr5_2:6928499-6928518 | Msa0753230:CDS | 35.0% | |
TCCATACACCTATCAAGAAT+AGG | + | chr5_2:6928503-6928522 | None:intergenic | 35.0% | |
AATTCCTCATCCATTTCATC+GGG | + | chr5_2:6928759-6928778 | None:intergenic | 35.0% | |
ATGAATAAAGAAGTAGCACG+CGG | + | chr5_2:6928927-6928946 | None:intergenic | 35.0% | |
! | TTTCTGTTTGTTAGCTGCTT+TGG | - | chr5_2:6928950-6928969 | Msa0753230:CDS | 35.0% |
! | TGTTACTCCTTTTCAAATGG+TGG | - | chr5_2:6928980-6928999 | Msa0753230:CDS | 35.0% |
TAGCAGGTTTCTATTTCATG+AGG | - | chr5_2:6929009-6929028 | Msa0753230:CDS | 35.0% | |
AACATACTATCAGTTCTTGC+AGG | + | chr5_2:6929092-6929111 | None:intergenic | 35.0% | |
CTTAAAGTTAGGGGTAGATG+TGG | - | chr5_2:6925935-6925954 | Msa0753230:CDS | 40.0% | |
CACAATCTACTACCCAAAGA+TGG | - | chr5_2:6925966-6925985 | Msa0753230:CDS | 40.0% | |
TAGAAGCTCTCATTCCAAAC+AGG | + | chr5_2:6926074-6926093 | None:intergenic | 40.0% | |
GTGAGATAGTGAAGATTGGA+AGG | + | chr5_2:6926113-6926132 | None:intergenic | 40.0% | |
AAGGACTCAACAGAAGGATT+TGG | + | chr5_2:6926347-6926366 | None:intergenic | 40.0% | |
GTGATGAAATGTGTGTCTTG+AGG | + | chr5_2:6926447-6926466 | None:intergenic | 40.0% | |
TCCCTAACACAAACCATCAA+CGG | - | chr5_2:6926468-6926487 | Msa0753230:intron | 40.0% | |
! | TGTACTAGCTTCATAGGTTG+TGG | + | chr5_2:6926578-6926597 | None:intergenic | 40.0% |
! | TGCATGTGTACTAGCTTCAT+AGG | + | chr5_2:6926584-6926603 | None:intergenic | 40.0% |
CTCAGTTACATCACTACAAC+CGG | - | chr5_2:6926604-6926623 | Msa0753230:CDS | 40.0% | |
TTTGTATGTCAGGGTCGTTA+AGG | - | chr5_2:6926745-6926764 | Msa0753230:CDS | 40.0% | |
CTTCCTTCTATGGATCTTAC+CGG | - | chr5_2:6926776-6926795 | Msa0753230:CDS | 40.0% | |
TTCCTTCTATGGATCTTACC+GGG | - | chr5_2:6926777-6926796 | Msa0753230:CDS | 40.0% | |
AACAAATGGATCAAGACTCC+CGG | + | chr5_2:6926798-6926817 | None:intergenic | 40.0% | |
! | GAGTCTTGATCCATTTGTTG+AGG | - | chr5_2:6926799-6926818 | Msa0753230:CDS | 40.0% |
CCAATTCTCACCTCAACAAA+TGG | + | chr5_2:6926812-6926831 | None:intergenic | 40.0% | |
! | CCATTTGTTGAGGTGAGAAT+TGG | - | chr5_2:6926809-6926828 | Msa0753230:CDS | 40.0% |
GTGAGAATTGGCAATTACAG+AGG | - | chr5_2:6926821-6926840 | Msa0753230:CDS | 40.0% | |
ATAAGAATCAGAATCCGGAG+TGG | - | chr5_2:6926861-6926880 | Msa0753230:CDS | 40.0% | |
CTATCTGGTGGAACTCTTAA+AGG | + | chr5_2:6927010-6927029 | None:intergenic | 40.0% | |
TATCGCCTTGACGATAAGAA+AGG | - | chr5_2:6927049-6927068 | Msa0753230:CDS | 40.0% | |
ATCGCCTTGACGATAAGAAA+GGG | - | chr5_2:6927050-6927069 | Msa0753230:CDS | 40.0% | |
TTGATGCTAGCTGTTTGGAT+TGG | - | chr5_2:6927091-6927110 | Msa0753230:CDS | 40.0% | |
TACGACAGTGATACGTTCAA+AGG | - | chr5_2:6927189-6927208 | Msa0753230:CDS | 40.0% | |
AGCACAAGACTTGATTCCAA+CGG | - | chr5_2:6927258-6927277 | Msa0753230:CDS | 40.0% | |
!!! | CTGTCTTTGTTTTCAGCACT+TGG | + | chr5_2:6927330-6927349 | None:intergenic | 40.0% |
CTAGAACTCTAAACCCACAA+TGG | - | chr5_2:6927356-6927375 | Msa0753230:CDS | 40.0% | |
! | CCAATGATCTCATCTTTTCC+CGG | + | chr5_2:6927457-6927476 | None:intergenic | 40.0% |
CGGGAAAAGATGAGATCATT+GGG | - | chr5_2:6927455-6927474 | Msa0753230:CDS | 40.0% | |
GAAAAGATGAGATCATTGGG+AGG | - | chr5_2:6927458-6927477 | Msa0753230:CDS | 40.0% | |
TTGCAAGCAGAATTCAGCTA+CGG | - | chr5_2:6927599-6927618 | Msa0753230:CDS | 40.0% | |
! | TCCATAACTGTTTTGCAGTG+GGG | + | chr5_2:6927687-6927706 | None:intergenic | 40.0% |
! | CTCCATAACTGTTTTGCAGT+GGG | + | chr5_2:6927688-6927707 | None:intergenic | 40.0% |
!! | CCGAGTTCTAAAACACCAAT+TGG | + | chr5_2:6927715-6927734 | None:intergenic | 40.0% |
ACTCCACCCAATGAAAACAA+GGG | - | chr5_2:6927753-6927772 | Msa0753230:CDS | 40.0% | |
!!! | CTACCATCCCTTGTTTTCAT+TGG | + | chr5_2:6927763-6927782 | None:intergenic | 40.0% |
ATGAAAACAAGGGATGGTAG+AGG | - | chr5_2:6927763-6927782 | Msa0753230:CDS | 40.0% | |
TTCCCAAATCAGTGGTGAAA+AGG | - | chr5_2:6927936-6927955 | Msa0753230:CDS | 40.0% | |
TCCCAAATCAGTGGTGAAAA+GGG | - | chr5_2:6927937-6927956 | Msa0753230:CDS | 40.0% | |
!!! | ACCCTTTTCACCACTGATTT+GGG | + | chr5_2:6927941-6927960 | None:intergenic | 40.0% |
!! | TATCGACTCTTGAAACAGGA+CGG | - | chr5_2:6928001-6928020 | Msa0753230:CDS | 40.0% |
! | CCCAACTGGTGTTAAGAAAA+TGG | - | chr5_2:6928059-6928078 | Msa0753230:CDS | 40.0% |
! | CCCATTTTCTTAACACCAGT+TGG | + | chr5_2:6928063-6928082 | None:intergenic | 40.0% |
GAAAATGGGAGAACTTCACT+TGG | - | chr5_2:6928074-6928093 | Msa0753230:CDS | 40.0% | |
!!! | GGAGAAGTGGTTTTGAGTAT+AGG | + | chr5_2:6928140-6928159 | None:intergenic | 40.0% |
!! | TAATGCATTTTCGGGAGAAG+TGG | + | chr5_2:6928153-6928172 | None:intergenic | 40.0% |
TCCCGAAAATGCATTACGTT+AGG | - | chr5_2:6928157-6928176 | Msa0753230:CDS | 40.0% | |
! | GCCTAACGTAATGCATTTTC+GGG | + | chr5_2:6928161-6928180 | None:intergenic | 40.0% |
! | GGCCTAACGTAATGCATTTT+CGG | + | chr5_2:6928162-6928181 | None:intergenic | 40.0% |
TCACCAAGCAGTAAACATAG+TGG | - | chr5_2:6928212-6928231 | Msa0753230:CDS | 40.0% | |
!! | CAGATGTTGACTCACATCTA+TGG | - | chr5_2:6928292-6928311 | Msa0753230:CDS | 40.0% |
GAAAGAAGTTTGCCTTGCTA+CGG | + | chr5_2:6928326-6928345 | None:intergenic | 40.0% | |
CACCAGAAAAAACTGTCATG+AGG | + | chr5_2:6928350-6928369 | None:intergenic | 40.0% | |
!! | TTTTCTGGTGTGTTTGCAGT+TGG | - | chr5_2:6928360-6928379 | Msa0753230:CDS | 40.0% |
GTGTGTTTGCAGTTGGAAAA+TGG | - | chr5_2:6928367-6928386 | Msa0753230:CDS | 40.0% | |
GGTTAGGTGATATTTGCATG+TGG | - | chr5_2:6928388-6928407 | Msa0753230:CDS | 40.0% | |
AGTGTAGGCAAAATCAACTC+CGG | + | chr5_2:6928471-6928490 | None:intergenic | 40.0% | |
TGATAGGTGTATGGAACTTC+AGG | - | chr5_2:6928508-6928527 | Msa0753230:CDS | 40.0% | |
TTCTTGTGTTCATGTGTGGA+GGG | + | chr5_2:6928713-6928732 | None:intergenic | 40.0% | |
ATTCTTGTGTTCATGTGTGG+AGG | + | chr5_2:6928714-6928733 | None:intergenic | 40.0% | |
GAGATTCTTGTGTTCATGTG+TGG | + | chr5_2:6928717-6928736 | None:intergenic | 40.0% | |
CATGAACACAAGAATCTCAC+AGG | - | chr5_2:6928719-6928738 | Msa0753230:CDS | 40.0% | |
ATTCCTCATCCATTTCATCG+GGG | + | chr5_2:6928758-6928777 | None:intergenic | 40.0% | |
! | AGGTCAGGATTTTTGCTTGT+TGG | + | chr5_2:6928792-6928811 | None:intergenic | 40.0% |
ATCCTGACCTTGTAAGAATG+CGG | - | chr5_2:6928802-6928821 | Msa0753230:CDS | 40.0% | |
GATCATACCGCATTCTTACA+AGG | + | chr5_2:6928812-6928831 | None:intergenic | 40.0% | |
GGTAGAATACAAACGGTTGT+AGG | - | chr5_2:6928849-6928868 | Msa0753230:CDS | 40.0% | |
ACAAACGGTTGTAGGTGATT+TGG | - | chr5_2:6928857-6928876 | Msa0753230:CDS | 40.0% | |
AAACCAGCCACCATTTGAAA+AGG | + | chr5_2:6928990-6929009 | None:intergenic | 40.0% | |
AAGTTAGGGGTAGATGTGGT+TGG | - | chr5_2:6925939-6925958 | Msa0753230:CDS | 45.0% | |
CTACTACCCAAAGATGGAGA+AGG | - | chr5_2:6925972-6925991 | Msa0753230:CDS | 45.0% | |
GAAGAGCCTTCTCCATCTTT+GGG | + | chr5_2:6925981-6926000 | None:intergenic | 45.0% | |
AGAAGAGCCTTCTCCATCTT+TGG | + | chr5_2:6925982-6926001 | None:intergenic | 45.0% | |
!! | TAGTAGCTTTGGAATGGCAG+TGG | + | chr5_2:6926151-6926170 | None:intergenic | 45.0% |
!! | GGACAAAAGAAGTACCTGTG+AGG | + | chr5_2:6926202-6926221 | None:intergenic | 45.0% |
AGACAACTGCATCAGCTTGA+GGG | + | chr5_2:6926223-6926242 | None:intergenic | 45.0% | |
AAGACAACTGCATCAGCTTG+AGG | + | chr5_2:6926224-6926243 | None:intergenic | 45.0% | |
AGTTGTCTTGCACTATCCGT+TGG | - | chr5_2:6926235-6926254 | Msa0753230:CDS | 45.0% | |
! | AAAATCCCGCGCTTTTCCAA+CGG | + | chr5_2:6926254-6926273 | None:intergenic | 45.0% |
! | GGGATTTTCTCTCGTGTAAG+AGG | - | chr5_2:6926266-6926285 | Msa0753230:CDS | 45.0% |
CCATTCATCATTGAACCCGT+AGG | + | chr5_2:6926401-6926420 | None:intergenic | 45.0% | |
CCTACGGGTTCAATGATGAA+TGG | - | chr5_2:6926398-6926417 | Msa0753230:intron | 45.0% | |
! | GAATGGTTTGTCTCGTGACA+AGG | - | chr5_2:6926415-6926434 | Msa0753230:intron | 45.0% |
!! | GTTGATGGTTTGTGTTAGGG+AGG | + | chr5_2:6926469-6926488 | None:intergenic | 45.0% |
!! | GCCGTTGATGGTTTGTGTTA+GGG | + | chr5_2:6926472-6926491 | None:intergenic | 45.0% |
!! | TGCCGTTGATGGTTTGTGTT+AGG | + | chr5_2:6926473-6926492 | None:intergenic | 45.0% |
GTGAGTATCTGCATATCCAG+TGG | + | chr5_2:6926513-6926532 | None:intergenic | 45.0% | |
AGTTCCACCAGATAGTCCTT+TGG | - | chr5_2:6927015-6927034 | Msa0753230:CDS | 45.0% | |
ATCGTCAAGGCGATACCATT+CGG | + | chr5_2:6927044-6927063 | None:intergenic | 45.0% | |
TCGCCTTGACGATAAGAAAG+GGG | - | chr5_2:6927051-6927070 | Msa0753230:CDS | 45.0% | |
TCTCCCCTTTCTTATCGTCA+AGG | + | chr5_2:6927057-6927076 | None:intergenic | 45.0% | |
!! | GTGAGTTGATGCTAGCTGTT+TGG | - | chr5_2:6927086-6927105 | Msa0753230:CDS | 45.0% |
AACGGAGAAAAACCGTTTCC+CGG | - | chr5_2:6927276-6927295 | Msa0753230:CDS | 45.0% | |
TGACATATGCATCCGGGAAA+CGG | + | chr5_2:6927291-6927310 | None:intergenic | 45.0% | |
TTTCCCGGATGCATATGTCA+AGG | - | chr5_2:6927291-6927310 | Msa0753230:CDS | 45.0% | |
TGGACCTTGACATATGCATC+CGG | + | chr5_2:6927298-6927317 | None:intergenic | 45.0% | |
GCATATGTCAAGGTCCAGAT+AGG | - | chr5_2:6927301-6927320 | Msa0753230:CDS | 45.0% | |
! | TGTGGGTTTAGAGTTCTAGC+AGG | + | chr5_2:6927355-6927374 | None:intergenic | 45.0% |
CTTTCGGTTGAAGATCGAGT+TGG | - | chr5_2:6927430-6927449 | Msa0753230:CDS | 45.0% | |
CCGGGAAAAGATGAGATCAT+TGG | - | chr5_2:6927454-6927473 | Msa0753230:CDS | 45.0% | |
CTTCAGCTGATCAACATCCA+CGG | + | chr5_2:6927569-6927588 | None:intergenic | 45.0% | |
AATTCAGCTACGGCTATGTC+TGG | - | chr5_2:6927609-6927628 | Msa0753230:CDS | 45.0% | |
! | CCTCCATAACTGTTTTGCAG+TGG | + | chr5_2:6927689-6927708 | None:intergenic | 45.0% |
CCACTGCAAAACAGTTATGG+AGG | - | chr5_2:6927686-6927705 | Msa0753230:CDS | 45.0% | |
GACTCCACCCAATGAAAACA+AGG | - | chr5_2:6927752-6927771 | Msa0753230:CDS | 45.0% | |
!!! | CATCCCTTGTTTTCATTGGG+TGG | + | chr5_2:6927759-6927778 | None:intergenic | 45.0% |
CACCCAATGAAAACAAGGGA+TGG | - | chr5_2:6927757-6927776 | Msa0753230:CDS | 45.0% | |
GTCACAAATGGGTCAGAACA+AGG | - | chr5_2:6927818-6927837 | Msa0753230:CDS | 45.0% | |
TGTCAAAGACACCTACTGTG+AGG | + | chr5_2:6927915-6927934 | None:intergenic | 45.0% | |
!! | GACCCTTTTCACCACTGATT+TGG | + | chr5_2:6927942-6927961 | None:intergenic | 45.0% |
!! | CGCATATCGACTCTTGAAAC+AGG | - | chr5_2:6927997-6928016 | Msa0753230:CDS | 45.0% |
GTTGGGTGAAGAACAAGCAA+TGG | + | chr5_2:6928045-6928064 | None:intergenic | 45.0% | |
TTGCTTGTTCTTCACCCAAC+TGG | - | chr5_2:6928045-6928064 | Msa0753230:CDS | 45.0% | |
CTGCCACTATGTTTACTGCT+TGG | + | chr5_2:6928218-6928237 | None:intergenic | 45.0% | |
TCCACCACTTCTTTACGAAG+CGG | + | chr5_2:6928264-6928283 | None:intergenic | 45.0% | |
!!! | CGCCTCATGACAGTTTTTTC+TGG | - | chr5_2:6928345-6928364 | Msa0753230:CDS | 45.0% |
!! | TCTCATGTTGGTTTGCTTCC+CGG | - | chr5_2:6928449-6928468 | Msa0753230:CDS | 45.0% |
GTGTAGGCAAAATCAACTCC+GGG | + | chr5_2:6928470-6928489 | None:intergenic | 45.0% | |
!! | TTCATGTGTGGAGGGTATCT+TGG | + | chr5_2:6928705-6928724 | None:intergenic | 45.0% |
TGTAGTACACCCCGATGAAA+TGG | - | chr5_2:6928746-6928765 | Msa0753230:CDS | 45.0% | |
TACCGCATTCTTACAAGGTC+AGG | + | chr5_2:6928807-6928826 | None:intergenic | 45.0% | |
GAATGCGGTATGATCGTTTG+AGG | - | chr5_2:6928817-6928836 | Msa0753230:CDS | 45.0% | |
CGTGGCTGGTAGAATACAAA+CGG | - | chr5_2:6928842-6928861 | Msa0753230:CDS | 45.0% | |
! | ACTCCTTTTCAAATGGTGGC+TGG | - | chr5_2:6928984-6929003 | Msa0753230:CDS | 45.0% |
GGAAGCCTGTTTCGAAATCT+GGG | + | chr5_2:6929038-6929057 | None:intergenic | 45.0% | |
! | AAGAAGTTGATCGGTGCAGA+CGG | + | chr5_2:6929059-6929078 | None:intergenic | 45.0% |
! | AGTCGACGGAAGAAGTTGAT+CGG | + | chr5_2:6929068-6929087 | None:intergenic | 45.0% |
! | CTTGGCAAAGTTAGCCTCAC+AGG | - | chr5_2:6926185-6926204 | Msa0753230:CDS | 50.0% |
CACTATCCGTTGGAAAAGCG+CGG | - | chr5_2:6926245-6926264 | Msa0753230:CDS | 50.0% | |
! | ACTATCCGTTGGAAAAGCGC+GGG | - | chr5_2:6926246-6926265 | Msa0753230:CDS | 50.0% |
TCTCGTGTAAGAGGTGAGCT+TGG | - | chr5_2:6926275-6926294 | Msa0753230:CDS | 50.0% | |
GTTGGCAAGGACTCAACAGA+AGG | + | chr5_2:6926353-6926372 | None:intergenic | 50.0% | |
GTTGATGCTGATGCCGTTGA+TGG | + | chr5_2:6926484-6926503 | None:intergenic | 50.0% | |
CAGCATCAACAACACTCCAC+TGG | - | chr5_2:6926494-6926513 | Msa0753230:intron | 50.0% | |
GAAACAAGTCCGTTTCTCGG+TGG | - | chr5_2:6926644-6926663 | Msa0753230:CDS | 50.0% | |
CTCCCGGTAAGATCCATAGA+AGG | + | chr5_2:6926782-6926801 | None:intergenic | 50.0% | |
GCAAAAACCTGATGCCACTC+CGG | + | chr5_2:6926878-6926897 | None:intergenic | 50.0% | |
ATAGTCCTTTGGCACCCGAA+TGG | - | chr5_2:6927026-6927045 | Msa0753230:CDS | 50.0% | |
TCGTCAAGGCGATACCATTC+GGG | + | chr5_2:6927043-6927062 | None:intergenic | 50.0% | |
TTCAGATGCAGCTTCACCTG+TGG | - | chr5_2:6927150-6927169 | Msa0753230:CDS | 50.0% | |
CGTATCACTGTCGTAGTAGC+AGG | + | chr5_2:6927184-6927203 | None:intergenic | 50.0% | |
CAAAGGTCTATCATGCTCCG+AGG | - | chr5_2:6927206-6927225 | Msa0753230:CDS | 50.0% | |
TCTATCATGCTCCGAGGTTG+TGG | - | chr5_2:6927212-6927231 | Msa0753230:CDS | 50.0% | |
ACACGAACGTACCACAACCT+CGG | + | chr5_2:6927226-6927245 | None:intergenic | 50.0% | |
! | GGGAAACGGTTTTTCTCCGT+TGG | + | chr5_2:6927277-6927296 | None:intergenic | 50.0% |
GGACCTTGACATATGCATCC+GGG | + | chr5_2:6927297-6927316 | None:intergenic | 50.0% | |
TCAGCACTTGGCTTCCTATC+TGG | + | chr5_2:6927318-6927337 | None:intergenic | 50.0% | |
!! | GGTTGAAGATCGAGTTGGTC+CGG | - | chr5_2:6927435-6927454 | Msa0753230:CDS | 50.0% |
!! | GTTGAAGATCGAGTTGGTCC+GGG | - | chr5_2:6927436-6927455 | Msa0753230:CDS | 50.0% |
TACCATACCACTGAACGCTG+TGG | - | chr5_2:6927483-6927502 | Msa0753230:CDS | 50.0% | |
TGATCAACATCCACGGCAAC+AGG | + | chr5_2:6927562-6927581 | None:intergenic | 50.0% | |
GCCCCACTGCAAAACAGTTA+TGG | - | chr5_2:6927683-6927702 | Msa0753230:CDS | 50.0% | |
CAGTTATGGAGGCCACCAAT+TGG | - | chr5_2:6927697-6927716 | Msa0753230:CDS | 50.0% | |
!! | CTCGGAGTGCTGAATGCAAT+AGG | - | chr5_2:6927730-6927749 | Msa0753230:CDS | 50.0% |
CAACGAGCAATACACTTGGG+AGG | - | chr5_2:6927870-6927889 | Msa0753230:CDS | 50.0% | |
! | TCGAGTTGCATGACTGCGAA+TGG | + | chr5_2:6928183-6928202 | None:intergenic | 50.0% |
CAGTAAACATAGTGGCAGCG+CGG | - | chr5_2:6928220-6928239 | Msa0753230:CDS | 50.0% | |
ACCACTTCTTTACGAAGCGG+TGG | + | chr5_2:6928261-6928280 | None:intergenic | 50.0% | |
ACCGCTTCGTAAAGAAGTGG+TGG | - | chr5_2:6928260-6928279 | Msa0753230:CDS | 50.0% | |
!! | TGTGTGGAGGGTATCTTGGT+CGG | + | chr5_2:6928701-6928720 | None:intergenic | 50.0% |
ACACCCCGATGAAATGGATG+AGG | - | chr5_2:6928752-6928771 | Msa0753230:CDS | 50.0% | |
GTATGATCGTTTGAGGAGCG+TGG | - | chr5_2:6928824-6928843 | Msa0753230:CDS | 50.0% | |
! | TGTAGGTGATTTGGCTAGCC+AGG | - | chr5_2:6928866-6928885 | Msa0753230:CDS | 50.0% |
! | GTAGGTGATTTGGCTAGCCA+GGG | - | chr5_2:6928867-6928886 | Msa0753230:CDS | 50.0% |
GGATTCATGCACTGTTGAGC+TGG | - | chr5_2:6928895-6928914 | Msa0753230:CDS | 50.0% | |
!! | CAAATGGTGGCTGGTTTAGC+AGG | - | chr5_2:6928993-6929012 | Msa0753230:CDS | 50.0% |
GGCATCCCAGATTTCGAAAC+AGG | - | chr5_2:6929030-6929049 | Msa0753230:CDS | 50.0% | |
CGGAAGCCTGTTTCGAAATC+TGG | + | chr5_2:6929039-6929058 | None:intergenic | 50.0% | |
CAGTTCTTGCAGGAAGTCGA+CGG | + | chr5_2:6929082-6929101 | None:intergenic | 50.0% | |
TGCTGAAGTCCACGGACCTA+CGG | - | chr5_2:6926382-6926401 | Msa0753230:intron | 55.0% | |
TCATTGAACCCGTAGGTCCG+TGG | + | chr5_2:6926394-6926413 | None:intergenic | 55.0% | |
ACAAGTCCGTTTCTCGGTGG+AGG | - | chr5_2:6926647-6926666 | Msa0753230:CDS | 55.0% | |
TCCGTTTCTCGGTGGAGGAA+GGG | - | chr5_2:6926652-6926671 | Msa0753230:CDS | 55.0% | |
ACCCTTCCTCCACCGAGAAA+CGG | + | chr5_2:6926656-6926675 | None:intergenic | 55.0% | |
GGCTCGTGAGCTTCCTTCTA+TGG | - | chr5_2:6926766-6926785 | Msa0753230:CDS | 55.0% | |
TCAGAATCCGGAGTGGCATC+AGG | - | chr5_2:6926868-6926887 | Msa0753230:CDS | 55.0% | |
GGTGCCAAAGGACTATCTGG+TGG | + | chr5_2:6927022-6927041 | None:intergenic | 55.0% | |
TCGGGTGCCAAAGGACTATC+TGG | + | chr5_2:6927025-6927044 | None:intergenic | 55.0% | |
CGATACCATTCGGGTGCCAA+AGG | + | chr5_2:6927034-6927053 | None:intergenic | 55.0% | |
CTCCACAGCGTTCAGTGGTA+TGG | + | chr5_2:6927488-6927507 | None:intergenic | 55.0% | |
TACCACTGAACGCTGTGGAG+AGG | - | chr5_2:6927488-6927507 | Msa0753230:CDS | 55.0% | |
CTTGGAAAAGCCTGTTGCCG+TGG | - | chr5_2:6927549-6927568 | Msa0753230:CDS | 55.0% | |
CAGCTACGGCTATGTCTGGA+TGG | - | chr5_2:6927613-6927632 | Msa0753230:CDS | 55.0% | |
CTACGGCTATGTCTGGATGG+AGG | - | chr5_2:6927616-6927635 | Msa0753230:CDS | 55.0% | |
GACACCTACTGTGAGGACTG+TGG | + | chr5_2:6927908-6927927 | None:intergenic | 55.0% | |
GCCACCGCTTCGTAAAGAAG+TGG | - | chr5_2:6928257-6928276 | Msa0753230:CDS | 55.0% | |
! | ATTTGGCTAGCCAGGGTGAG+AGG | - | chr5_2:6928874-6928893 | Msa0753230:CDS | 55.0% |
GTGCATGAATCCTCTCACCC+TGG | + | chr5_2:6928887-6928906 | None:intergenic | 55.0% | |
GCTGAAGTCCACGGACCTAC+GGG | - | chr5_2:6926383-6926402 | Msa0753230:intron | 60.0% | |
GTCCGTTTCTCGGTGGAGGA+AGG | - | chr5_2:6926651-6926670 | Msa0753230:CDS | 60.0% | |
CTCGGTGGAGGAAGGGTTGT+TGG | - | chr5_2:6926659-6926678 | Msa0753230:CDS | 60.0% | |
GGTGGAGGAAGGGTTGTTGG+CGG | - | chr5_2:6926662-6926681 | Msa0753230:CDS | 60.0% | |
CCTACTGTGAGGACTGTGGC+AGG | + | chr5_2:6927904-6927923 | None:intergenic | 60.0% | |
CCTGCCACAGTCCTCACAGT+AGG | - | chr5_2:6927901-6927920 | Msa0753230:CDS | 60.0% | |
AACATAGTGGCAGCGCGGCT+CGG | - | chr5_2:6928225-6928244 | Msa0753230:CDS | 60.0% | |
ATGGAGCATGCGCCGTAGCA+AGG | - | chr5_2:6928311-6928330 | Msa0753230:CDS | 60.0% | |
! | GATCGTTTGAGGAGCGTGGC+TGG | - | chr5_2:6928828-6928847 | Msa0753230:CDS | 60.0% |
GTAGCAGGCGTGCTGTCCAC+AGG | + | chr5_2:6927169-6927188 | None:intergenic | 65.0% | |
CGCCTCTCCACAGCGTTCAG+TGG | + | chr5_2:6927493-6927512 | None:intergenic | 65.0% | |
! | GAACGCTGTGGAGAGGCGTG+CGG | - | chr5_2:6927495-6927514 | Msa0753230:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 6925927 | 6929115 | 6925927 | ID=Msa0753230;Name=Msa0753230 |
chr5_2 | mRNA | 6925927 | 6929115 | 6925927 | ID=Msa0753230-mRNA-1;Parent=Msa0753230;Name=Msa0753230-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|1007 |
chr5_2 | exon | 6926513 | 6929115 | 6926513 | ID=Msa0753230-mRNA-1:exon:3062;Parent=Msa0753230-mRNA-1 |
chr5_2 | exon | 6925927 | 6926347 | 6925927 | ID=Msa0753230-mRNA-1:exon:3061;Parent=Msa0753230-mRNA-1 |
chr5_2 | CDS | 6926513 | 6929115 | 6926513 | ID=Msa0753230-mRNA-1:cds;Parent=Msa0753230-mRNA-1 |
chr5_2 | CDS | 6925927 | 6926347 | 6925927 | ID=Msa0753230-mRNA-1:cds;Parent=Msa0753230-mRNA-1 |
Gene Sequence |
Protein sequence |