AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358350 MtrunA17_Chr8g0386781 99.551 445 2 0 1 445 1 445 0.0 934
Msa1358350 MtrunA17_Chr2g0292921 92.093 430 34 0 1 430 1 430 0.0 824
Msa1358350 MtrunA17_Chr7g0255791 92.326 430 33 0 1 430 1 430 0.0 823
Msa1358350 MtrunA17_Chr3g0142731 92.791 430 29 1 1 428 1 430 0.0 822
Msa1358350 MtrunA17_Chr4g0051631 91.860 430 35 0 1 430 1 430 0.0 821
Msa1358350 MtrunA17_Chr4g0008401 90.698 430 40 0 1 430 1 430 0.0 817
Msa1358350 MtrunA17_Chr4g0008361 90.698 430 40 0 1 430 1 430 0.0 816
Msa1358350 MtrunA17_Chr1g0203181 91.395 430 37 0 1 430 1 430 0.0 816
Msa1358350 MtrunA17_Chr4g0007371 90.509 432 39 1 1 430 1 432 0.0 813
Msa1358350 MtrunA17_Chr8g0393021 88.262 443 51 1 1 442 1 443 0.0 806
Msa1358350 MtrunA17_Chr8g0378821 40.275 437 245 3 1 424 1 434 1.16e-123 367
Msa1358350 MtrunA17_Chr1g0206881 39.514 453 260 3 1 443 1 449 1.65e-122 363
Msa1358350 MtrunA17_Chr3g0140821 39.862 434 251 2 1 424 1 434 1.23e-121 362
Msa1358350 MtrunA17_Chr7g0253411 38.902 437 251 3 1 424 1 434 7.68e-121 359
Msa1358350 MtrunA17_Chr4g0054511 39.817 437 247 3 1 424 1 434 1.87e-120 358
Msa1358350 MtrunA17_Chr6g0461281 38.852 453 260 3 1 442 1 447 3.07e-119 355
Msa1358350 MtrunA17_Chr2g0300671 36.259 433 265 3 1 425 1 430 1.98e-98 301
Msa1358350 MtrunA17_Chr2g0300491 35.619 452 277 5 1 443 1 447 1.26e-97 301
Msa1358350 MtrunA17_Chr7g0275431 34.932 438 268 7 2 423 3 439 2.10e-96 298
Msa1358350 MtrunA17_Chr3g0109241 29.630 135 87 1 269 395 4 138 9.82e-21 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358350 AT5G12250.1 91.860 430 35 0 1 430 1 430 0.0 823
Msa1358350 AT5G62690.1 91.628 430 36 0 1 430 1 430 0.0 820
Msa1358350 AT5G62700.1 91.628 430 36 0 1 430 1 430 0.0 820
Msa1358350 AT5G23860.2 91.628 430 36 0 1 430 1 430 0.0 818
Msa1358350 AT5G23860.1 91.628 430 36 0 1 430 1 430 0.0 818
Msa1358350 AT1G75780.1 91.415 431 36 1 1 430 1 431 0.0 818
Msa1358350 AT2G29550.1 91.395 430 37 0 1 430 1 430 0.0 815
Msa1358350 AT4G20890.1 91.355 428 37 0 1 428 1 428 0.0 814
Msa1358350 AT5G44340.1 90.698 430 40 0 1 430 1 430 0.0 814
Msa1358350 AT1G20010.1 90.255 431 41 1 1 430 1 431 0.0 810
Msa1358350 AT1G64740.1 39.817 437 247 3 1 424 1 434 1.38e-123 367
Msa1358350 AT5G19780.1 40.046 437 246 3 1 424 1 434 1.75e-123 367
Msa1358350 AT5G19770.1 40.046 437 246 3 1 424 1 434 1.75e-123 367
Msa1358350 AT4G14960.2 39.862 434 251 2 1 424 1 434 1.42e-120 359
Msa1358350 AT1G50010.1 39.631 434 252 2 1 424 1 434 1.01e-119 357
Msa1358350 AT1G04820.1 39.631 434 252 2 1 424 1 434 1.01e-119 357
Msa1358350 AT4G14960.1 38.333 420 243 4 1 405 1 419 1.69e-101 310
Msa1358350 AT3G61650.1 34.802 454 279 7 2 439 3 455 6.15e-97 299
Msa1358350 AT5G05620.1 35.388 438 266 7 2 423 3 439 7.96e-97 299

Find 118 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCGATGTCTTCAACATTTA+TGG 0.073250 tig0016232:-2671 Msa1358350:CDS
CTTTGACACAACATTATTTA+AGG 0.115881 tig0016232:-2406 Msa1358350:three_prime_UTR
AAAATGGAGCTGGTAATAAT+TGG 0.203839 tig0016232:-5065 Msa1358350:CDS
ATCAAATTGGAGGAAAGTTT+TGG 0.229733 tig0016232:-5305 Msa1358350:CDS
AACTTTGTGTTTGGACAAAA+TGG 0.233944 tig0016232:-5081 Msa1358350:CDS
ACACTTGATTTCACATTGTT+TGG 0.262813 tig0016232:+2718 Msa1358350:intergenic
GGGGAATTCGACATCTATTC+AGG 0.279124 tig0016232:-2650 Msa1358350:CDS
CACATTTGCTGTGTGAGTTC+TGG 0.291813 tig0016232:+2895 Msa1358350:intergenic
TGTCCAAACACAAAGTTATC+AGG 0.298095 tig0016232:+5087 Msa1358350:intergenic
AGGTACAATAAAATACAAAA+AGG 0.318152 tig0016232:+5483 Msa1358350:intergenic
ACATGTTGCCTTCGATTTCC+TGG 0.324939 tig0016232:-3045 Msa1358350:CDS
TTGAGAACCTCTTGATGTTA+AGG 0.349935 tig0016232:+2939 Msa1358350:intergenic
GGTCAATGTGGAAATCAAAT+TGG 0.350835 tig0016232:-5318 Msa1358350:CDS
AGGCCTGATAACTTTGTGTT+TGG 0.357278 tig0016232:-5090 Msa1358350:CDS
CATTCGCTTGGAGGTGGAAC+TGG 0.363770 tig0016232:-3499 Msa1358350:CDS
TACTGTTATGTTTAAGAGAA+AGG 0.366259 tig0016232:-2599 Msa1358350:CDS
GCCAACTCAACTCTGATCTT+AGG 0.372257 tig0016232:-3023 Msa1358350:CDS
CAAGAACTCGTCTTACTTTG+TGG 0.372832 tig0016232:-2749 Msa1358350:CDS
AAAGTCAACATCATTCTATC+TGG 0.375155 tig0016232:+3430 Msa1358350:intergenic
TGGATACTCTTCTCTGATCT+TGG 0.375902 tig0016232:+3450 Msa1358350:intergenic
GGAAATGTTTAGGCGTGTTT+CGG 0.380130 tig0016232:-2629 Msa1358350:CDS
ACCATGGACAGTTTGCGTTC+TGG 0.381939 tig0016232:-5132 Msa1358350:CDS
GTTTGTGATATTCCGCCAAC+AGG 0.382753 tig0016232:-2697 Msa1358350:CDS
TGAGAACCTCTTGATGTTAA+GGG 0.384725 tig0016232:+2940 Msa1358350:intergenic
CAAGTTCAAGTTGGAATGAA+TGG 0.389774 tig0016232:+5434 Msa1358350:intergenic
CATCTATTCAGGAAATGTTT+AGG 0.391950 tig0016232:-2639 Msa1358350:CDS
ATATGATCAATTTGTATAGT+AGG 0.397464 tig0016232:-2081 Msa1358350:three_prime_UTR
AGTTTGCGTTCTGGTCCATT+TGG 0.400891 tig0016232:-5123 Msa1358350:CDS
TGTTCCTAGAGCTGTTCTAA+TGG 0.402683 tig0016232:-5169 Msa1358350:CDS
CTTGGAGGTGGAACTGGATC+AGG 0.406313 tig0016232:-3493 Msa1358350:CDS
TCGATGTCTTCAACATTTAT+GGG 0.411456 tig0016232:-2670 Msa1358350:CDS
CAAATTTGTCATTCGCTTGG+AGG 0.423709 tig0016232:-3508 Msa1358350:CDS
GCTATAAATGCATCCGCAAC+AGG 0.426855 tig0016232:+2018 Msa1358350:intergenic
CTCAGTGTTCCCTTCACCAA+AGG 0.429890 tig0016232:-3407 Msa1358350:CDS
GATGATAATATTGATATAAT+CGG 0.431860 tig0016232:+5511 Msa1358350:intergenic
TGAGAGTAATATGAATGATT+TGG 0.437777 tig0016232:-2521 Msa1358350:CDS
TCATTGTTGTTGATATCAAA+TGG 0.437987 tig0016232:+3076 Msa1358350:intergenic
AAATGGAGCTGGTAATAATT+GGG 0.455480 tig0016232:-5064 Msa1358350:CDS
ATGGAAATGAAGGAATGAAT+AGG 0.458875 tig0016232:+5453 Msa1358350:intergenic
GAACATGGGATAGATCCTTC+AGG 0.466390 tig0016232:-5267 Msa1358350:CDS
TACTCATATATATTATGAGT+TGG 0.474850 tig0016232:-2247 Msa1358350:three_prime_UTR
AACAGAGAGAGTTGCATTGT+AGG 0.476137 tig0016232:+3363 Msa1358350:intergenic
TGTCCATGGTACCTGGTTCA+AGG 0.476857 tig0016232:+5145 Msa1358350:intergenic
CAACAATATCAAGATGCTGC+TGG 0.478321 tig0016232:-2487 Msa1358350:CDS
ACTCGTCTTACTTTGTGGAA+TGG 0.479530 tig0016232:-2744 Msa1358350:CDS
CGCAAACTGTCCATGGTACC+TGG 0.481937 tig0016232:+5138 Msa1358350:intergenic
GTTGGAATGAATGGAAATGA+AGG 0.482157 tig0016232:+5443 Msa1358350:intergenic
ATTTGTCATTCGCTTGGAGG+TGG 0.482876 tig0016232:-3505 Msa1358350:CDS
CATTCACTCTCTCAAGTTGA+AGG 0.484150 tig0016232:+5223 Msa1358350:intergenic
TCCTAAGATCAGAGTTGAGT+TGG 0.484588 tig0016232:+3022 Msa1358350:intergenic
TTTCAAATTTGTCATTCGCT+TGG 0.487407 tig0016232:-3511 Msa1358350:CDS
AGATCAGAGTTGAGTTGGCC+AGG 0.492155 tig0016232:+3027 Msa1358350:intergenic
GGATGCATTTATAGCAGTGT+GGG 0.492272 tig0016232:-2010 Msa1358350:three_prime_UTR
ACCACGGTATCAGAAACCTT+TGG 0.497655 tig0016232:+3391 Msa1358350:intergenic
GTTAGATACCTACCATGTCT+TGG 0.498617 tig0016232:+2841 Msa1358350:intergenic
ACCAAAGGTTTCTGATACCG+TGG 0.501560 tig0016232:-3392 Msa1358350:CDS
GAATTAGATCAAGTTCAAGT+TGG 0.501919 tig0016232:+5425 Msa1358350:intergenic
GGTGGAACTGGATCAGGAAT+GGG 0.503857 tig0016232:-3487 Msa1358350:CDS
TTGGTATACTGCTGAAGGTA+TGG 0.508640 tig0016232:-2566 Msa1358350:CDS
GCTGGTAATAATTGGGCTAA+AGG 0.511964 tig0016232:-5057 Msa1358350:CDS
CAGAACTCACACAGCAAATG+TGG 0.515042 tig0016232:-2894 Msa1358350:CDS
TTTGGGGCTATCAATTCTCA+TGG 0.518844 tig0016232:-2198 Msa1358350:three_prime_UTR
ACAGAGAGAGTTGCATTGTA+GGG 0.519248 tig0016232:+3364 Msa1358350:intergenic
TTGCATTGGTATACTGCTGA+AGG 0.520097 tig0016232:-2571 Msa1358350:CDS
AGGTGGAACTGGATCAGGAA+TGG 0.523254 tig0016232:-3488 Msa1358350:CDS
GTAGACGTGGGAAAGGGATG+AGG 0.527644 tig0016232:+2986 Msa1358350:intergenic
GTTCTAATGGACCTTGAACC+AGG 0.529290 tig0016232:-5156 Msa1358350:CDS
AGAAGGTGAGTTTGATGAAG+AGG 0.531082 tig0016232:-2458 Msa1358350:CDS
GATCCTTCAGGAAGTTATGT+AGG 0.538806 tig0016232:-5255 Msa1358350:CDS
GTTTGATGAAGAGGATGAAG+AGG 0.539736 tig0016232:-2449 Msa1358350:CDS
TGCTGAAGGTATGGATGAGA+TGG 0.544333 tig0016232:-2557 Msa1358350:CDS
CGGATGCATTTATAGCAGTG+TGG 0.546228 tig0016232:-2011 Msa1358350:three_prime_UTR
ATTGACCTGCTTGTACATGA+AGG 0.549639 tig0016232:+5334 Msa1358350:intergenic
GTGTTTGGACAAAATGGAGC+TGG 0.552919 tig0016232:-5075 Msa1358350:CDS
AGGTCCATTAGAACAGCTCT+AGG 0.555093 tig0016232:+5165 Msa1358350:intergenic
ATATCAAGATGCTGCTGGAG+TGG 0.555240 tig0016232:-2482 Msa1358350:CDS
GAAATCCTTCATGTACAAGC+AGG 0.558579 tig0016232:-5339 Msa1358350:CDS
TATATATATTGGTAATGGCA+TGG 0.560961 tig0016232:-2309 Msa1358350:three_prime_UTR
CGATGTCTTCAACATTTATG+GGG 0.563783 tig0016232:-2669 Msa1358350:CDS
GTGTCAAAGTCATTGCAACT+AGG 0.573104 tig0016232:+2420 Msa1358350:intergenic
ATGCATGGTTCTTGATAATG+AGG 0.575426 tig0016232:-3314 Msa1358350:CDS
TTTGCTCCCTTAACATCAAG+AGG 0.575576 tig0016232:-2946 Msa1358350:CDS
ACCAGAACGCAAACTGTCCA+TGG 0.577628 tig0016232:+5131 Msa1358350:intergenic
TATCAGAAACCTTTGGTGAA+GGG 0.577868 tig0016232:+3398 Msa1358350:intergenic
GTATCAGAAACCTTTGGTGA+AGG 0.578981 tig0016232:+3397 Msa1358350:intergenic
CAATGTGGAAATCAAATTGG+AGG 0.579577 tig0016232:-5315 Msa1358350:CDS
GAGAATTGTGACTGCTTGCA+AGG 0.582924 tig0016232:-4973 Msa1358350:intron
GACATCGACAACCCTGTTGG+CGG 0.586523 tig0016232:+2685 Msa1358350:intergenic
GAGGTTATGTGTGATGAACA+TGG 0.587045 tig0016232:-5282 Msa1358350:CDS
TTGATATCAACAACAATGAG+TGG 0.588382 tig0016232:-3072 Msa1358350:CDS
GATGCTGCTGGAGTGGAAGA+AGG 0.601710 tig0016232:-2475 Msa1358350:CDS
TGATCAATTTGTATAGTAGG+TGG 0.605006 tig0016232:-2078 Msa1358350:three_prime_UTR
TCTGATCTTGGAAATGAGCA+AGG 0.607155 tig0016232:+3462 Msa1358350:intergenic
TTTCCTACATAACTTCCTGA+AGG 0.607311 tig0016232:+5252 Msa1358350:intergenic
TTGGGGCTATCAATTCTCAT+GGG 0.609849 tig0016232:-2197 Msa1358350:three_prime_UTR
GGACCTTGAACCAGGTACCA+TGG 0.613180 tig0016232:-5148 Msa1358350:CDS
TGAAAATGCAGACGAATGCA+TGG 0.615580 tig0016232:-3329 Msa1358350:CDS
ATTATTAACATCAATTAACA+AGG 0.621809 tig0016232:+2106 Msa1358350:intergenic
GAAGACATCGACAACCCTGT+TGG 0.636735 tig0016232:+2682 Msa1358350:intergenic
TGGTAGGTATCTAACAGCCT+CGG 0.636835 tig0016232:-2833 Msa1358350:CDS
ACAGCCTCGGCAATGTTCCG+CGG 0.640517 tig0016232:-2820 Msa1358350:CDS
TGAGTTGGCCAGGAAATCGA+AGG 0.641216 tig0016232:+3037 Msa1358350:intergenic
TTTGCCGCGGAACATTGCCG+AGG 0.645424 tig0016232:+2816 Msa1358350:intergenic
GCTAAAGGACATTACACTGA+AGG 0.649556 tig0016232:-5042 Msa1358350:CDS
GATGCATTTATAGCAGTGTG+GGG 0.651831 tig0016232:-2009 Msa1358350:three_prime_UTR
AGAACTCACACAGCAAATGT+GGG 0.657245 tig0016232:-2893 Msa1358350:CDS
CATGTACAAGCAGGTCAATG+TGG 0.664189 tig0016232:-5330 Msa1358350:CDS
AGGTTATGTGTGATGAACAT+GGG 0.668105 tig0016232:-5281 Msa1358350:CDS
TTTGTGATATTCCGCCAACA+GGG 0.672464 tig0016232:-2696 Msa1358350:CDS
ATGCTATTTAGTACCTGTTG+CGG 0.674984 tig0016232:-2031 Msa1358350:three_prime_UTR
TGCATTGTAGGGTTCCACCA+CGG 0.684800 tig0016232:+3375 Msa1358350:intergenic
TACTACAATGAAGCAAGTGG+TGG 0.685754 tig0016232:-5198 Msa1358350:CDS
ATGCATTTATAGCAGTGTGG+GGG 0.686496 tig0016232:-2008 Msa1358350:three_prime_UTR
CTGCTGATCCAAGACATGGT+AGG 0.688948 tig0016232:-2849 Msa1358350:CDS
GTGTACTACAATGAAGCAAG+TGG 0.690095 tig0016232:-5201 Msa1358350:CDS
GGATGAGATGGAGTTTACTG+AGG 0.703310 tig0016232:-2545 Msa1358350:CDS
AAAGGTTTCTGATACCGTGG+TGG 0.730334 tig0016232:-3389 Msa1358350:CDS
TGTGCTGCTGATCCAAGACA+TGG 0.750746 tig0016232:-2853 Msa1358350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATATTTTTTTATTTTTA+GGG + tig0016232:3311-3330 Msa1358350:intergenic 0.0%
!!! GTATATTCATTTTTTTAAAA+TGG + tig0016232:2883-2902 Msa1358350:intergenic 10.0%
!! AATTGAATGTATATAAAAAA+TGG + tig0016232:3530-3549 Msa1358350:intergenic 10.0%
!! GATGATAATATTGATATAAT+CGG + tig0016232:1995-2014 Msa0316590:intergenic 15.0%
!! AAGAAAATAAAAAAGACTAT+AGG + tig0016232:2120-2139 Msa0316590:intergenic 15.0%
!! AAAAAGTTTAAATAAGTATC+TGG - tig0016232:2643-2662 Msa1358350:CDS 15.0%
!! CTAAAAACAATATATTTATG+AGG + tig0016232:2670-2689 Msa1358350:intergenic 15.0%
!!! ATTTATTTTATTCTAGTTCT+TGG - tig0016232:2703-2722 Msa1358350:CDS 15.0%
!!! ATTTTTTTAAAATGGGTAAA+AGG + tig0016232:2875-2894 Msa1358350:intergenic 15.0%
!!! TATTTTTTTATTTTTAGGGA+AGG + tig0016232:3307-3326 Msa1358350:intergenic 15.0%
!!! ATATTATTTTGTTAGGATTA+CGG + tig0016232:3826-3845 Msa1358350:intergenic 15.0%
!!! AGGTTAAATATTATTTTGTT+AGG + tig0016232:3833-3852 Msa1358350:intergenic 15.0%
!! TGTTACACATATATATATAT+TGG - tig0016232:5183-5202 Msa1358350:CDS 15.0%
!! ACATATATATATATTGGTAA+TGG - tig0016232:5189-5208 Msa1358350:CDS 15.0%
!! ATTATTAACATCAATTAACA+AGG + tig0016232:5400-5419 Msa1358350:intergenic 15.0%
!! AATAAAATACAAAAAGGGAT+AGG + tig0016232:2017-2036 Msa0316590:intergenic 20.0%
!! GGTACAATAAAATACAAAAA+GGG + tig0016232:2022-2041 Msa0316590:intergenic 20.0%
!! AGGTACAATAAAATACAAAA+AGG + tig0016232:2023-2042 Msa0316590:intergenic 20.0%
!!! CATTTTATAATTATCATCGA+GGG + tig0016232:2819-2838 Msa1358350:intergenic 20.0%
!!! TCATTTTATAATTATCATCG+AGG + tig0016232:2820-2839 Msa1358350:intergenic 20.0%
!! CCTTGCAAATTTAATTATAT+TGG + tig0016232:3045-3064 Msa1358350:intergenic 20.0%
!! CCAATATAATTAAATTTGCA+AGG - tig0016232:3042-3061 Msa1358350:CDS 20.0%
!! AATTGAATGTATCTAAAAAG+TGG - tig0016232:3591-3610 Msa1358350:intron 20.0%
!!! GTTCTTAAGTTATTTTTAGT+AGG + tig0016232:3664-3683 Msa1358350:intergenic 20.0%
!! AACTTAAGAACATAAAACAT+TGG - tig0016232:3673-3692 Msa1358350:intron 20.0%
!!! GGATTTTTTTTTTTTTTGAG+AGG + tig0016232:3727-3746 Msa1358350:intergenic 20.0%
!!! ACATTATTTAAGGTTCTTTT+TGG - tig0016232:5107-5126 Msa1358350:CDS 20.0%
!! TACTCATATATATTATGAGT+TGG - tig0016232:5256-5275 Msa1358350:CDS 20.0%
!!! TTTTATTTTGAATCGTTTGT+TGG - tig0016232:5337-5356 Msa1358350:CDS 20.0%
!! ATATGATCAATTTGTATAGT+AGG - tig0016232:5422-5441 Msa1358350:five_prime_UTR 20.0%
!!! ATAGATATTTTCTTTAGTGA+TGG - tig0016232:5449-5468 Msa1358350:five_prime_UTR 20.0%
! GTCCATTTGGAAAAATATTT+AGG - tig0016232:2393-2412 Msa1358350:three_prime_UTR 25.0%
! GTGAAGTGATGAATAAAATA+AGG + tig0016232:2561-2580 Msa1358350:intergenic 25.0%
!! ATTTTATTCATCACTTCACT+CGG - tig0016232:2562-2581 Msa1358350:CDS 25.0%
!!! TTGTTTTGCATATGAATAGA+CGG - tig0016232:2613-2632 Msa1358350:CDS 25.0%
!! ATTTGAACTTTGTACTTTTG+AGG + tig0016232:2796-2815 Msa1358350:intergenic 25.0%
!! AATATACACTGTTTTGCTTT+TGG - tig0016232:2896-2915 Msa1358350:CDS 25.0%
! GTCATTTATCTCACTTAAAT+TGG - tig0016232:2977-2996 Msa1358350:CDS 25.0%
! ATTTATCTCACTTAAATTGG+AGG - tig0016232:2980-2999 Msa1358350:CDS 25.0%
! TTTATCTCACTTAAATTGGA+GGG - tig0016232:2981-3000 Msa1358350:CDS 25.0%
!!! TGTGGCAGAATTTTTTTTAA+AGG + tig0016232:3137-3156 Msa1358350:intergenic 25.0%
!! AAGTATGGATTAAACTTAGA+AGG + tig0016232:3265-3284 Msa1358350:intergenic 25.0%
! ATGTAAACATAATGTTGATG+TGG - tig0016232:3377-3396 Msa1358350:CDS 25.0%
! AAATAATTAAATGTTGAGCC+AGG + tig0016232:3458-3477 Msa1358350:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + tig0016232:3615-3634 Msa1358350:intergenic 25.0%
! CATTCAATTAATGATGTATG+TGG - tig0016232:3541-3560 Msa1358350:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - tig0016232:3615-3634 Msa1358350:intron 25.0%
! AAAAAAAAAAATCCTTGCGT+TGG - tig0016232:3733-3752 Msa1358350:intron 25.0%
! TGTGAAGGTTTCTTATAATA+AGG + tig0016232:3790-3809 Msa1358350:intergenic 25.0%
! ACCTTAACTTATATCAAGAA+TGG - tig0016232:3849-3868 Msa1358350:intron 25.0%
! ACCATTCTTGATATAAGTTA+AGG + tig0016232:3853-3872 Msa1358350:intergenic 25.0%
!! TCATTGTTGTTGATATCAAA+TGG + tig0016232:4430-4449 Msa1358350:intergenic 25.0%
! TACTGTTATGTTTAAGAGAA+AGG - tig0016232:4904-4923 Msa1358350:intron 25.0%
! TGAGAGTAATATGAATGATT+TGG - tig0016232:4982-5001 Msa1358350:CDS 25.0%
! CTTTGACACAACATTATTTA+AGG - tig0016232:5097-5116 Msa1358350:CDS 25.0%
!!! TATATATATTGGTAATGGCA+TGG - tig0016232:5194-5213 Msa1358350:CDS 25.0%
!! TGCAAATGTAAAAAGTACAT+AGG - tig0016232:5281-5300 Msa1358350:CDS 25.0%
!! TGTAAAAAGTACATAGGATT+TGG - tig0016232:5287-5306 Msa1358350:CDS 25.0%
!! GTAAAAAGTACATAGGATTT+GGG - tig0016232:5288-5307 Msa1358350:CDS 25.0%
!! TAAAAAGTACATAGGATTTG+GGG - tig0016232:5289-5308 Msa1358350:CDS 25.0%
!!! CAAATATTTTTTCCCTTTGT+GGG + tig0016232:5528-5547 Msa1358350:intergenic 25.0%
!!! TCAAATATTTTTTCCCTTTG+TGG + tig0016232:5529-5548 Msa1358350:intergenic 25.0%
ATGGAAATGAAGGAATGAAT+AGG + tig0016232:2053-2072 Msa0316590:intergenic 30.0%
GAATTAGATCAAGTTCAAGT+TGG + tig0016232:2081-2100 Msa0316590:intergenic 30.0%
! ATCAAATTGGAGGAAAGTTT+TGG - tig0016232:2198-2217 Msa1358350:three_prime_UTR 30.0%
! TCAAATTGGAGGAAAGTTTT+GGG - tig0016232:2199-2218 Msa1358350:three_prime_UTR 30.0%
! GGCCTAAATATTTTTCCAAA+TGG + tig0016232:2398-2417 Msa1358350:intergenic 30.0%
AACTTTGTGTTTGGACAAAA+TGG - tig0016232:2422-2441 Msa1358350:exon 30.0%
AAAATGGAGCTGGTAATAAT+TGG - tig0016232:2438-2457 Msa1358350:CDS 30.0%
AAATGGAGCTGGTAATAATT+GGG - tig0016232:2439-2458 Msa1358350:CDS 30.0%
AATACATCGTTCTCTACATT+TGG - tig0016232:2728-2747 Msa1358350:CDS 30.0%
!!! TCAATCGTGTTGTTTTGTTT+TGG + tig0016232:3069-3088 Msa1358350:intergenic 30.0%
CGTGACTATGATTTAATCTT+TGG + tig0016232:3199-3218 Msa1358350:intergenic 30.0%
AATCGAGGTTATATGTTTAG+TGG - tig0016232:3238-3257 Msa1358350:intron 30.0%
ACAAACGACAGGAAAAATTT+GGG + tig0016232:3336-3355 Msa1358350:intergenic 30.0%
TACAAACGACAGGAAAAATT+TGG + tig0016232:3337-3356 Msa1358350:intergenic 30.0%
GTGAACCTATTTAAATGACT+TGG - tig0016232:3408-3427 Msa1358350:CDS 30.0%
GGTTAAATATGTTAGTGTGA+AGG + tig0016232:3805-3824 Msa1358350:intergenic 30.0%
ATGGTGACATGAACAAAATT+TGG - tig0016232:3868-3887 Msa1358350:intron 30.0%
TGGTCATTATTTATCAACCA+TGG + tig0016232:3914-3933 Msa1358350:intergenic 30.0%
!!! TAAGGTTTTGAGGAAAGTTA+TGG + tig0016232:3934-3953 Msa1358350:intergenic 30.0%
! ACATAAAGCATAAGGTTTTG+AGG + tig0016232:3944-3963 Msa1358350:intergenic 30.0%
AACCTTATGCTTTATGTGAA+TGG - tig0016232:3947-3966 Msa1358350:intron 30.0%
TTCCATTCACATAAAGCATA+AGG + tig0016232:3952-3971 Msa1358350:intergenic 30.0%
TTTCAAATTTGTCATTCGCT+TGG - tig0016232:3992-4011 Msa1358350:intron 30.0%
AAAGTCAACATCATTCTATC+TGG + tig0016232:4076-4095 Msa1358350:intergenic 30.0%
TGATGAAAACACTTACAACT+TGG + tig0016232:4256-4275 Msa1358350:intergenic 30.0%
!! TACTGACACTCATTTTGAAA+CGG - tig0016232:4340-4359 Msa1358350:intron 30.0%
!!! TTTTGTTGTTTTCATGCAGT+TGG - tig0016232:4395-4414 Msa1358350:intron 30.0%
TTGATATCAACAACAATGAG+TGG - tig0016232:4431-4450 Msa1358350:intron 30.0%
ACACTTGATTTCACATTGTT+TGG + tig0016232:4788-4807 Msa1358350:intergenic 30.0%
TCGATGTCTTCAACATTTAT+GGG - tig0016232:4833-4852 Msa1358350:intron 30.0%
CATCTATTCAGGAAATGTTT+AGG - tig0016232:4864-4883 Msa1358350:intron 30.0%
! TTTTTGGATCATTCATGTCA+TGG - tig0016232:5123-5142 Msa1358350:CDS 30.0%
TGATCAATTTGTATAGTAGG+TGG - tig0016232:5425-5444 Msa1358350:five_prime_UTR 30.0%
! AGGAATGAATAGGCTTTTGT+AGG + tig0016232:2043-2062 Msa0316590:intergenic 35.0%
GTTGGAATGAATGGAAATGA+AGG + tig0016232:2063-2082 Msa0316590:intergenic 35.0%
!! CAAGTTCAAGTTGGAATGAA+TGG + tig0016232:2072-2091 Msa0316590:intergenic 35.0%
GGTCAATGTGGAAATCAAAT+TGG - tig0016232:2185-2204 Msa1358350:three_prime_UTR 35.0%
CAATGTGGAAATCAAATTGG+AGG - tig0016232:2188-2207 Msa1358350:three_prime_UTR 35.0%
AGGTTATGTGTGATGAACAT+GGG - tig0016232:2222-2241 Msa1358350:three_prime_UTR 35.0%
TTTCCTACATAACTTCCTGA+AGG + tig0016232:2254-2273 Msa1358350:intergenic 35.0%
TGTCCAAACACAAAGTTATC+AGG + tig0016232:2419-2438 Msa1358350:intergenic 35.0%
TTGTAACCATGTTGCAACTT+AGG + tig0016232:3164-3183 Msa1358350:intergenic 35.0%
TTGCAACATGGTTACAATTG+AGG - tig0016232:3167-3186 Msa1358350:intron 35.0%
AGACTAATTGTACAAACGAC+AGG + tig0016232:3347-3366 Msa1358350:intergenic 35.0%
GTCATTTAAATAGGTTCACG+TGG + tig0016232:3407-3426 Msa1358350:intergenic 35.0%
GGAAGCCAAGTCATTTAAAT+AGG + tig0016232:3416-3435 Msa1358350:intergenic 35.0%
TTCTTAAATCATACACCCTC+CGG - tig0016232:3484-3503 Msa1358350:CDS 35.0%
TTTGGAAACATGCATACGTA+TGG - tig0016232:3886-3905 Msa1358350:intron 35.0%
GGAAATTGTTTGATGTTGAC+AGG - tig0016232:3968-3987 Msa1358350:intron 35.0%
TATCAGAAACCTTTGGTGAA+GGG + tig0016232:4108-4127 Msa1358350:intergenic 35.0%
!! ATGCATGGTTCTTGATAATG+AGG - tig0016232:4189-4208 Msa1358350:intron 35.0%
AAAAATGTAGACGTGGGAAA+GGG + tig0016232:4526-4545 Msa1358350:intergenic 35.0%
AAAAAATGTAGACGTGGGAA+AGG + tig0016232:4527-4546 Msa1358350:intergenic 35.0%
CCATGAAAAAATGTAGACGT+GGG + tig0016232:4532-4551 Msa1358350:intergenic 35.0%
ACCATGAAAAAATGTAGACG+TGG + tig0016232:4533-4552 Msa1358350:intergenic 35.0%
!!! CGTCTACATTTTTTCATGGT+TGG - tig0016232:4533-4552 Msa1358350:intron 35.0%
TGAGAACCTCTTGATGTTAA+GGG + tig0016232:4566-4585 Msa1358350:intergenic 35.0%
TTGAGAACCTCTTGATGTTA+AGG + tig0016232:4567-4586 Msa1358350:intergenic 35.0%
GTCGATGTCTTCAACATTTA+TGG - tig0016232:4832-4851 Msa1358350:intron 35.0%
CGATGTCTTCAACATTTATG+GGG - tig0016232:4834-4853 Msa1358350:intron 35.0%
!!! AGAGAAAGGCATTTTTGCAT+TGG - tig0016232:4918-4937 Msa1358350:intron 35.0%
AATGGCATGGAGAAAAAAGA+AGG - tig0016232:5207-5226 Msa1358350:CDS 35.0%
ATGGCATGGAGAAAAAAGAA+GGG - tig0016232:5208-5227 Msa1358350:CDS 35.0%
! ATGCTATTTAGTACCTGTTG+CGG - tig0016232:5472-5491 Msa1358350:five_prime_UTR 35.0%
GAAATCCTTCATGTACAAGC+AGG - tig0016232:2164-2183 Msa1358350:three_prime_UTR 40.0%
ATTGACCTGCTTGTACATGA+AGG + tig0016232:2172-2191 Msa1358350:intergenic 40.0%
!!! AATTGGAGGAAAGTTTTGGG+AGG - tig0016232:2202-2221 Msa1358350:three_prime_UTR 40.0%
GAGGTTATGTGTGATGAACA+TGG - tig0016232:2221-2240 Msa1358350:three_prime_UTR 40.0%
GATCCTTCAGGAAGTTATGT+AGG - tig0016232:2248-2267 Msa1358350:three_prime_UTR 40.0%
!! CATTCACTCTCTCAAGTTGA+AGG + tig0016232:2283-2302 Msa1358350:intergenic 40.0%
GTGTACTACAATGAAGCAAG+TGG - tig0016232:2302-2321 Msa1358350:three_prime_UTR 40.0%
TACTACAATGAAGCAAGTGG+TGG - tig0016232:2305-2324 Msa1358350:three_prime_UTR 40.0%
TGTTCCTAGAGCTGTTCTAA+TGG - tig0016232:2334-2353 Msa1358350:three_prime_UTR 40.0%
AGGCCTGATAACTTTGTGTT+TGG - tig0016232:2413-2432 Msa1358350:three_prime_UTR 40.0%
GCTGGTAATAATTGGGCTAA+AGG - tig0016232:2446-2465 Msa1358350:CDS 40.0%
GCTAAAGGACATTACACTGA+AGG - tig0016232:2461-2480 Msa1358350:CDS 40.0%
ACATCGTTCTCTACATTTGG+AGG - tig0016232:2731-2750 Msa1358350:CDS 40.0%
TTCTCTACATTTGGAGGTGA+TGG - tig0016232:2737-2756 Msa1358350:CDS 40.0%
! AGGTGATGGTGATAACTTAG+TGG - tig0016232:2751-2770 Msa1358350:CDS 40.0%
AACACGATTGAGCAGCAAAA+CGG - tig0016232:3078-3097 Msa1358350:CDS 40.0%
TGTTGCAACTTAGGTCTATG+TGG + tig0016232:3155-3174 Msa1358350:intergenic 40.0%
CATAGACCTAAGTTGCAACA+TGG - tig0016232:3155-3174 Msa1358350:intron 40.0%
ATAGTCACGATCGTTGCATA+CGG - tig0016232:3210-3229 Msa1358350:intron 40.0%
! TAAATGACTTGGCTTCCATG+TGG - tig0016232:3419-3438 Msa1358350:CDS 40.0%
TGCTTATATTAGTGACCGGA+GGG + tig0016232:3619-3638 Msa1358350:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + tig0016232:3618-3637 Msa1358350:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - tig0016232:3618-3637 Msa1358350:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG - tig0016232:3619-3638 Msa1358350:intron 40.0%
TTGAGAGGTCTAATGCAAGA+AGG + tig0016232:3712-3731 Msa1358350:intergenic 40.0%
CAAATTTGTCATTCGCTTGG+AGG - tig0016232:3995-4014 Msa1358350:intron 40.0%
TCTGATCTTGGAAATGAGCA+AGG + tig0016232:4044-4063 Msa1358350:intergenic 40.0%
TGGATACTCTTCTCTGATCT+TGG + tig0016232:4056-4075 Msa1358350:intergenic 40.0%
GTATCAGAAACCTTTGGTGA+AGG + tig0016232:4109-4128 Msa1358350:intergenic 40.0%
ACAGAGAGAGTTGCATTGTA+GGG + tig0016232:4142-4161 Msa1358350:intergenic 40.0%
AACAGAGAGAGTTGCATTGT+AGG + tig0016232:4143-4162 Msa1358350:intergenic 40.0%
TGAAAATGCAGACGAATGCA+TGG - tig0016232:4174-4193 Msa1358350:intron 40.0%
TCCTAAGATCAGAGTTGAGT+TGG + tig0016232:4484-4503 Msa1358350:intergenic 40.0%
!!! CCCACGTCTACATTTTTTCA+TGG - tig0016232:4529-4548 Msa1358350:intron 40.0%
TTTGCTCCCTTAACATCAAG+AGG - tig0016232:4557-4576 Msa1358350:intron 40.0%
AGAACTCACACAGCAAATGT+GGG - tig0016232:4610-4629 Msa1358350:intron 40.0%
GTTAGATACCTACCATGTCT+TGG + tig0016232:4665-4684 Msa1358350:intergenic 40.0%
CAAGAACTCGTCTTACTTTG+TGG - tig0016232:4754-4773 Msa1358350:intron 40.0%
ACTCGTCTTACTTTGTGGAA+TGG - tig0016232:4759-4778 Msa1358350:intron 40.0%
TTTGTGATATTCCGCCAACA+GGG - tig0016232:4807-4826 Msa1358350:intron 40.0%
GGAAATGTTTAGGCGTGTTT+CGG - tig0016232:4874-4893 Msa1358350:intron 40.0%
! TTGCATTGGTATACTGCTGA+AGG - tig0016232:4932-4951 Msa1358350:intron 40.0%
TTGGTATACTGCTGAAGGTA+TGG - tig0016232:4937-4956 Msa1358350:intron 40.0%
CAACAATATCAAGATGCTGC+TGG - tig0016232:5016-5035 Msa1358350:CDS 40.0%
AGAAGGTGAGTTTGATGAAG+AGG - tig0016232:5045-5064 Msa1358350:CDS 40.0%
GTTTGATGAAGAGGATGAAG+AGG - tig0016232:5054-5073 Msa1358350:CDS 40.0%
GTGTCAAAGTCATTGCAACT+AGG + tig0016232:5086-5105 Msa1358350:intergenic 40.0%
! TTTGGGGCTATCAATTCTCA+TGG - tig0016232:5305-5324 Msa1358350:CDS 40.0%
TTGGGGCTATCAATTCTCAT+GGG - tig0016232:5306-5325 Msa1358350:CDS 40.0%
GGATGCATTTATAGCAGTGT+GGG - tig0016232:5493-5512 Msa1358350:five_prime_UTR 40.0%
GATGCATTTATAGCAGTGTG+GGG - tig0016232:5494-5513 Msa1358350:five_prime_UTR 40.0%
ATGCATTTATAGCAGTGTGG+GGG - tig0016232:5495-5514 Msa1358350:five_prime_UTR 40.0%
CATGTACAAGCAGGTCAATG+TGG - tig0016232:2173-2192 Msa1358350:three_prime_UTR 45.0%
GAACATGGGATAGATCCTTC+AGG - tig0016232:2236-2255 Msa1358350:three_prime_UTR 45.0%
AGGTCCATTAGAACAGCTCT+AGG + tig0016232:2341-2360 Msa1358350:intergenic 45.0%
! GTTCTAATGGACCTTGAACC+AGG - tig0016232:2347-2366 Msa1358350:three_prime_UTR 45.0%
AGTTTGCGTTCTGGTCCATT+TGG - tig0016232:2380-2399 Msa1358350:three_prime_UTR 45.0%
GTGTTTGGACAAAATGGAGC+TGG - tig0016232:2428-2447 Msa1358350:exon 45.0%
GAGAATTGTGACTGCTTGCA+AGG - tig0016232:2530-2549 Msa1358350:CDS 45.0%
TCATCACTTCACTCGGTTCT+TGG - tig0016232:2569-2588 Msa1358350:CDS 45.0%
ACACGATTGAGCAGCAAAAC+GGG - tig0016232:3079-3098 Msa1358350:CDS 45.0%
TTGCATACGGTAGAGAATCG+AGG - tig0016232:3223-3242 Msa1358350:intron 45.0%
ATGTTGAGCCAGGTAACATG+TGG + tig0016232:3448-3467 Msa1358350:intergenic 45.0%
AAGTTACCAACTACACCCTC+CGG + tig0016232:3637-3656 Msa1358350:intergenic 45.0%
!! GAGGGTGTAGTTGGTAACTT+GGG - tig0016232:3637-3656 Msa1358350:intron 45.0%
!! AGGGTGTAGTTGGTAACTTG+GGG - tig0016232:3638-3657 Msa1358350:intron 45.0%
!! CAAAAAGCATCTCCAACGCA+AGG + tig0016232:3748-3767 Msa1358350:intergenic 45.0%
! CTTGCGTTGGAGATGCTTTT+TGG - tig0016232:3746-3765 Msa1358350:intron 45.0%
ATTTGTCATTCGCTTGGAGG+TGG - tig0016232:3998-4017 Msa1358350:intron 45.0%
ACCAAAGGTTTCTGATACCG+TGG - tig0016232:4111-4130 Msa1358350:intron 45.0%
ACCACGGTATCAGAAACCTT+TGG + tig0016232:4115-4134 Msa1358350:intergenic 45.0%
AAAGGTTTCTGATACCGTGG+TGG - tig0016232:4114-4133 Msa1358350:intron 45.0%
ACATGTTGCCTTCGATTTCC+TGG - tig0016232:4458-4477 Msa1358350:intron 45.0%
GCCAACTCAACTCTGATCTT+AGG - tig0016232:4480-4499 Msa1358350:intron 45.0%
!! CACATTTGCTGTGTGAGTTC+TGG + tig0016232:4611-4630 Msa1358350:intergenic 45.0%
CAGAACTCACACAGCAAATG+TGG - tig0016232:4609-4628 Msa1358350:intron 45.0%
TGGTAGGTATCTAACAGCCT+CGG - tig0016232:4670-4689 Msa1358350:intron 45.0%
! CTTTTGTGCTCATTTTGCCG+CGG + tig0016232:4703-4722 Msa1358350:intergenic 45.0%
GTTTGTGATATTCCGCCAAC+AGG - tig0016232:4806-4825 Msa1358350:intron 45.0%
GGGGAATTCGACATCTATTC+AGG - tig0016232:4853-4872 Msa1358350:intron 45.0%
! TGCTGAAGGTATGGATGAGA+TGG - tig0016232:4946-4965 Msa1358350:intron 45.0%
GGATGAGATGGAGTTTACTG+AGG - tig0016232:4958-4977 Msa1358350:intron 45.0%
ATATCAAGATGCTGCTGGAG+TGG - tig0016232:5021-5040 Msa1358350:CDS 45.0%
GCTATAAATGCATCCGCAAC+AGG + tig0016232:5488-5507 Msa1358350:intergenic 45.0%
CGGATGCATTTATAGCAGTG+TGG - tig0016232:5492-5511 Msa1358350:five_prime_UTR 45.0%
!!! TATATTCATTTTTTTAAAAT+GGG + tig0016232:2882-2901 Msa1358350:intergenic 5.0%
!! AATATTTATTAATTTAAGTA+TGG + tig0016232:3280-3299 Msa1358350:intergenic 5.0%
!!! CTAAATATTTTTTTATTTTT+AGG + tig0016232:3312-3331 Msa1358350:intergenic 5.0%
TGTCCATGGTACCTGGTTCA+AGG + tig0016232:2361-2380 Msa1358350:intergenic 50.0%
ACCATGGACAGTTTGCGTTC+TGG - tig0016232:2371-2390 Msa1358350:three_prime_UTR 50.0%
ACCAGAACGCAAACTGTCCA+TGG + tig0016232:2375-2394 Msa1358350:intergenic 50.0%
CACGATTGAGCAGCAAAACG+GGG - tig0016232:3080-3099 Msa1358350:CDS 50.0%
GGTAACATGTGGCTTCCACA+TGG + tig0016232:3437-3456 Msa1358350:intergenic 50.0%
TGTGGAAGCCACATGTTACC+TGG - tig0016232:3437-3456 Msa1358350:CDS 50.0%
!! GGAGGGTGTAGTTGGTAACT+TGG - tig0016232:3636-3655 Msa1358350:intron 50.0%
! CATGCATACGTATGGTGCCA+TGG - tig0016232:3894-3913 Msa1358350:intron 50.0%
AGGTGGAACTGGATCAGGAA+TGG - tig0016232:4015-4034 Msa1358350:intron 50.0%
GGTGGAACTGGATCAGGAAT+GGG - tig0016232:4016-4035 Msa1358350:intron 50.0%
CTCAGTGTTCCCTTCACCAA+AGG - tig0016232:4096-4115 Msa1358350:intron 50.0%
TGCATTGTAGGGTTCCACCA+CGG + tig0016232:4131-4150 Msa1358350:intergenic 50.0%
! TGAGTTGGCCAGGAAATCGA+AGG + tig0016232:4469-4488 Msa1358350:intergenic 50.0%
!! AGATCAGAGTTGAGTTGGCC+AGG + tig0016232:4479-4498 Msa1358350:intergenic 50.0%
! TGTGCTGCTGATCCAAGACA+TGG - tig0016232:4650-4669 Msa1358350:intron 50.0%
CTGCTGATCCAAGACATGGT+AGG - tig0016232:4654-4673 Msa1358350:intron 50.0%
GAAGACATCGACAACCCTGT+TGG + tig0016232:4824-4843 Msa1358350:intergenic 50.0%
GGACCTTGAACCAGGTACCA+TGG - tig0016232:2355-2374 Msa1358350:three_prime_UTR 55.0%
CGCAAACTGTCCATGGTACC+TGG + tig0016232:2368-2387 Msa1358350:intergenic 55.0%
! TAGTGACCGGAGGGTGTAGT+TGG - tig0016232:3628-3647 Msa1358350:intron 55.0%
CATTCGCTTGGAGGTGGAAC+TGG - tig0016232:4004-4023 Msa1358350:intron 55.0%
CTTGGAGGTGGAACTGGATC+AGG - tig0016232:4010-4029 Msa1358350:intron 55.0%
GTAGACGTGGGAAAGGGATG+AGG + tig0016232:4520-4539 Msa1358350:intergenic 55.0%
GACATCGACAACCCTGTTGG+CGG + tig0016232:4821-4840 Msa1358350:intergenic 55.0%
GATGCTGCTGGAGTGGAAGA+AGG - tig0016232:5028-5047 Msa1358350:CDS 55.0%
ACAGCCTCGGCAATGTTCCG+CGG - tig0016232:4683-4702 Msa1358350:intron 60.0%
TTTGCCGCGGAACATTGCCG+AGG + tig0016232:4690-4709 Msa1358350:intergenic 60.0%
!! TGGGGGTGTTGCACCCACAA+AGG - tig0016232:5512-5531 Msa1358350:five_prime_UTR 60.0%
!! GGGGGTGTTGCACCCACAAA+GGG - tig0016232:5513-5532 Msa1358350:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
tig0016232 gene 1943 5582 1943 ID=Msa1358350;Name=Msa1358350
tig0016232 mRNA 1943 5582 1943 ID=Msa1358350-mRNA-1;Parent=Msa1358350;Name=Msa1358350-mRNA-1;_AED=0.02;_eAED=0.02;_QI=215|1|1|1|1|1|3|495|445
tig0016232 exon 1943 3111 1943 ID=Msa1358350-mRNA-1:exon:10848;Parent=Msa1358350-mRNA-1
tig0016232 exon 3266 3535 3266 ID=Msa1358350-mRNA-1:exon:10847;Parent=Msa1358350-mRNA-1
tig0016232 exon 4974 5582 4974 ID=Msa1358350-mRNA-1:exon:10846;Parent=Msa1358350-mRNA-1
tig0016232 five_prime_UTR 5368 5582 5368 ID=Msa1358350-mRNA-1:five_prime_utr;Parent=Msa1358350-mRNA-1
tig0016232 CDS 4974 5367 4974 ID=Msa1358350-mRNA-1:cds;Parent=Msa1358350-mRNA-1
tig0016232 CDS 3266 3535 3266 ID=Msa1358350-mRNA-1:cds;Parent=Msa1358350-mRNA-1
tig0016232 CDS 2438 3111 2438 ID=Msa1358350-mRNA-1:cds;Parent=Msa1358350-mRNA-1
tig0016232 three_prime_UTR 1943 2437 1943 ID=Msa1358350-mRNA-1:three_prime_utr;Parent=Msa1358350-mRNA-1
Gene Sequence

>Msa1358350

ATGAGAGAAATCCTTCATGTACAAGCAGGTCAATGTGGAAATCAAATTGGAGGAAAGTTTTGGGAGGTTATGTGTGATGAACATGGGATAGATCCTTCAGGAAGTTATGTAGGAAAGTCACACCTTCAACTTGAGAGAGTGAATGTGTACTACAATGAAGCAAGTGGTGGAAGATATGTTCCTAGAGCTGTTCTAATGGACCTTGAACCAGGTACCATGGACAGTTTGCGTTCTGGTCCATTTGGAAAAATATTTAGGCCTGATAACTTTGTGTTTGGACAAAATGGAGCTGGTAATAATTGGGCTAAAGGACATTACACTGAAGGAGCTGAACTTATTGATTCTGTTCTTGATGTTGTTCGTAAAGAAGCTGAGAATTGTGACTGCTTGCAAGGTTTTCAAATTTGTCATTCGCTTGGAGGTGGAACTGGATCAGGAATGGGTACCTTGCTCATTTCCAAGATCAGAGAAGAGTATCCAGATAGAATGATGTTGACTTTCTCAGTGTTCCCTTCACCAAAGGTTTCTGATACCGTGGTGGAACCCTACAATGCAACTCTCTCTGTTCATCAACTAGTTGAAAATGCAGACGAATGCATGGTTCTTGATAATGAGGCACTCTATGATATCTGTTTCAGAACACTCAAGCTCACTAATCCAAGTTTTGGTGATTTGAACCATTTGATATCAACAACAATGAGTGGAGTAACATGTTGCCTTCGATTTCCTGGCCAACTCAACTCTGATCTTAGGAAACTAGCAGTTAACCTCATCCCTTTCCCACGTCTACATTTTTTCATGGTTGGTTTTGCTCCCTTAACATCAAGAGGTTCTCAACAGTACAGTTCTCTCACAATTCCAGAACTCACACAGCAAATGTGGGATGCAAGAAACATGATGTGTGCTGCTGATCCAAGACATGGTAGGTATCTAACAGCCTCGGCAATGTTCCGCGGCAAAATGAGCACAAAAGAAGTTGATCAACAGATGATAAATGTTCAGAACAAGAACTCGTCTTACTTTGTGGAATGGATTCCAAACAATGTGAAATCAAGTGTTTGTGATATTCCGCCAACAGGGTTGTCGATGTCTTCAACATTTATGGGGAATTCGACATCTATTCAGGAAATGTTTAGGCGTGTTTCGGAGCAGTTTACTGTTATGTTTAAGAGAAAGGCATTTTTGCATTGGTATACTGCTGAAGGTATGGATGAGATGGAGTTTACTGAGGCTGAGAGTAATATGAATGATTTGGTTGCTGAATATCAACAATATCAAGATGCTGCTGGAGTGGAAGAAGGTGAGTTTGATGAAGAGGATGAAGAGGAAATTGCCTAG
Protein sequence

>Msa1358350

MREILHVQAGQCGNQIGGKFWEVMCDEHGIDPSGSYVGKSHLQLERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSSLTIPELTQQMWDARNMMCAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTAEGMDEMEFTEAESNMNDLVAEYQQYQDAAGVEEGEFDEEDEEEIA*