Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340510 | XP_003624501.2 | 89.489 | 1037 | 18 | 5 | 1 | 967 | 46 | 1061 | 0.0 | 1877 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340510 | sp|Q8LPJ3|MANA2_ARATH | 64.451 | 1038 | 260 | 13 | 1 | 958 | 3 | 1011 | 0.0 | 1350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340510 | G7KX95 | 89.489 | 1037 | 18 | 5 | 1 | 967 | 46 | 1061 | 0.0 | 1877 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa1340510 | 0.832648 | 8.384648e-56 | -8.615850e-47 |
| Msa0021810 | Msa1340510 | 0.825422 | 4.729384e-54 | -8.615850e-47 |
| Msa0030280 | Msa1340510 | 0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa0032840 | Msa1340510 | -0.821519 | 3.868211e-53 | -8.615850e-47 |
| Msa0039250 | Msa1340510 | 0.811534 | 6.673741e-51 | -8.615850e-47 |
| Msa0052610 | Msa1340510 | 0.801948 | 7.076511e-49 | -8.615850e-47 |
| Msa0074320 | Msa1340510 | 0.806828 | 6.806755e-50 | -8.615850e-47 |
| Msa0081360 | Msa1340510 | 0.812777 | 3.573571e-51 | -8.615850e-47 |
| Msa0081480 | Msa1340510 | 0.810309 | 1.228903e-50 | -8.615850e-47 |
| Msa0092740 | Msa1340510 | -0.801031 | 1.090744e-48 | -8.615850e-47 |
| Msa0098470 | Msa1340510 | 0.800499 | 1.400631e-48 | -8.615850e-47 |
| Msa0110970 | Msa1340510 | 0.811775 | 5.913284e-51 | -8.615850e-47 |
| Msa0114540 | Msa1340510 | -0.833993 | 3.874020e-56 | -8.615850e-47 |
| Msa0609450 | Msa1340510 | 0.810464 | 1.137966e-50 | -8.615850e-47 |
| Msa0618040 | Msa1340510 | 0.800381 | 1.480501e-48 | -8.615850e-47 |
| Msa0620990 | Msa1340510 | 0.829222 | 5.809508e-55 | -8.615850e-47 |
| Msa0647130 | Msa1340510 | 0.808559 | 2.918228e-50 | -8.615850e-47 |
| Msa0648520 | Msa1340510 | 0.810041 | 1.403712e-50 | -8.615850e-47 |
| Msa0657790 | Msa1340510 | 0.816250 | 6.093732e-52 | -8.615850e-47 |
| Msa0692080 | Msa1340510 | 0.820501 | 6.634821e-53 | -8.615850e-47 |
| Msa0702340 | Msa1340510 | 0.841821 | 3.765781e-58 | -8.615850e-47 |
| Msa0702590 | Msa1340510 | 0.839806 | 1.271246e-57 | -8.615850e-47 |
| Msa0702660 | Msa1340510 | 0.841747 | 3.939763e-58 | -8.615850e-47 |
| Msa0753770 | Msa1340510 | 0.819070 | 1.408347e-52 | -8.615850e-47 |
| Msa0760380 | Msa1340510 | 0.816211 | 6.216584e-52 | -8.615850e-47 |
| Msa0778320 | Msa1340510 | 0.817917 | 2.571045e-52 | -8.615850e-47 |
| Msa0788770 | Msa1340510 | 0.807470 | 4.975968e-50 | -8.615850e-47 |
| Msa0801210 | Msa1340510 | 0.809172 | 2.157637e-50 | -8.615850e-47 |
| Msa0840260 | Msa1340510 | 0.810417 | 1.164639e-50 | -8.615850e-47 |
| Msa0124340 | Msa1340510 | 0.812760 | 3.604910e-51 | -8.615850e-47 |
| Msa0133720 | Msa1340510 | 0.809370 | 1.956901e-50 | -8.615850e-47 |
| Msa0133820 | Msa1340510 | 0.802896 | 4.513842e-49 | -8.615850e-47 |
| Msa0137610 | Msa1340510 | -0.806182 | 9.312960e-50 | -8.615850e-47 |
| Msa0171850 | Msa1340510 | 0.802570 | 5.269275e-49 | -8.615850e-47 |
| Msa0183830 | Msa1340510 | 0.801087 | 1.062217e-48 | -8.615850e-47 |
| Msa0222920 | Msa1340510 | 0.807262 | 5.509347e-50 | -8.615850e-47 |
| Msa0230550 | Msa1340510 | -0.814733 | 1.325820e-51 | -8.615850e-47 |
| Msa1224840 | Msa1340510 | 0.839564 | 1.469408e-57 | -8.615850e-47 |
| Msa1232710 | Msa1340510 | 0.808886 | 2.484224e-50 | -8.615850e-47 |
| Msa1236100 | Msa1340510 | 0.827705 | 1.349787e-54 | -8.615850e-47 |
| Msa1252190 | Msa1340510 | 0.845004 | 5.319650e-59 | -8.615850e-47 |
| Msa1274060 | Msa1340510 | 0.822399 | 2.418812e-53 | -8.615850e-47 |
| Msa1274280 | Msa1340510 | 0.832784 | 7.755917e-56 | -8.615850e-47 |
| Msa1283990 | Msa1340510 | 0.811151 | 8.081610e-51 | -8.615850e-47 |
| Msa1292830 | Msa1340510 | 0.821171 | 4.652469e-53 | -8.615850e-47 |
| Msa1307570 | Msa1340510 | 0.800734 | 1.254370e-48 | -8.615850e-47 |
| Msa1313300 | Msa1340510 | 0.817298 | 3.546220e-52 | -8.615850e-47 |
| Msa1333970 | Msa1340510 | 0.807570 | 4.738685e-50 | -8.615850e-47 |
| Msa1340510 | Msa1358350 | 0.821402 | 4.116276e-53 | -8.615850e-47 |
| Msa1340510 | Msa1373330 | 0.850416 | 1.722859e-60 | -8.615850e-47 |
| Msa1340510 | Msa1406040 | 0.826773 | 2.256481e-54 | -8.615850e-47 |
| Msa1340510 | Msa1442850 | 0.804016 | 2.645080e-49 | -8.615850e-47 |
| Msa1340510 | Msa1459380 | 0.813454 | 2.538746e-51 | -8.615850e-47 |
| Msa1340510 | Msa1461490 | 0.813606 | 2.350499e-51 | -8.615850e-47 |
| Msa0410500 | Msa1340510 | 0.821253 | 4.454933e-53 | -8.615850e-47 |
| Msa0422850 | Msa1340510 | 0.805753 | 1.146583e-49 | -8.615850e-47 |
| Msa0422930 | Msa1340510 | 0.802906 | 4.490981e-49 | -8.615850e-47 |
| Msa0479200 | Msa1340510 | 0.801244 | 9.867107e-49 | -8.615850e-47 |
| Msa1003030 | Msa1340510 | 0.801636 | 8.199072e-49 | -8.615850e-47 |
| Msa1012810 | Msa1340510 | 0.812011 | 5.254163e-51 | -8.615850e-47 |
| Msa1022970 | Msa1340510 | 0.800897 | 1.161449e-48 | -8.615850e-47 |
| Msa1054240 | Msa1340510 | 0.805085 | 1.582820e-49 | -8.615850e-47 |
| Msa0241800 | Msa1340510 | 0.818480 | 1.918113e-52 | -8.615850e-47 |
| Msa0274680 | Msa1340510 | 0.806481 | 8.057007e-50 | -8.615850e-47 |
| Msa0299890 | Msa1340510 | 0.802175 | 6.356032e-49 | -8.615850e-47 |
| Msa0302380 | Msa1340510 | 0.832473 | 9.267180e-56 | -8.615850e-47 |
| Msa0317250 | Msa1340510 | 0.800821 | 1.203772e-48 | -8.615850e-47 |
| Msa0317310 | Msa1340510 | 0.804052 | 2.599105e-49 | -8.615850e-47 |
| Msa0339640 | Msa1340510 | 0.822687 | 2.073608e-53 | -8.615850e-47 |
| Msa0340290 | Msa1340510 | 0.824346 | 8.483614e-54 | -8.615850e-47 |
| Msa0355270 | Msa1340510 | 0.801124 | 1.043921e-48 | -8.615850e-47 |
| Msa1143650 | Msa1340510 | 0.820138 | 8.034863e-53 | -8.615850e-47 |
| Msa1157750 | Msa1340510 | 0.826163 | 3.153380e-54 | -8.615850e-47 |
| Msa1157870 | Msa1340510 | 0.814107 | 1.823191e-51 | -8.615850e-47 |
| Msa1169040 | Msa1340510 | 0.806871 | 6.663260e-50 | -8.615850e-47 |
| Msa1173330 | Msa1340510 | 0.825239 | 5.224245e-54 | -8.615850e-47 |
| Msa1179940 | Msa1340510 | 0.813095 | 3.043767e-51 | -8.615850e-47 |
| Msa1179970 | Msa1340510 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
| Msa1182770 | Msa1340510 | 0.818937 | 1.510093e-52 | -8.615850e-47 |
| Msa1200370 | Msa1340510 | 0.811442 | 6.987213e-51 | -8.615850e-47 |
| Msa1208890 | Msa1340510 | -0.806629 | 7.495860e-50 | -8.615850e-47 |
| Msa1223330 | Msa1340510 | 0.839069 | 1.975114e-57 | -8.615850e-47 |
| Msa0485990 | Msa1340510 | 0.810864 | 9.323131e-51 | -8.615850e-47 |
| Msa0498450 | Msa1340510 | 0.800020 | 1.752602e-48 | -8.615850e-47 |
| Msa0521880 | Msa1340510 | 0.809275 | 2.050860e-50 | -8.615850e-47 |
| Msa0555910 | Msa1340510 | 0.811273 | 7.601814e-51 | -8.615850e-47 |
| Msa0556010 | Msa1340510 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
| Msa0561120 | Msa1340510 | 0.818658 | 1.747711e-52 | -8.615850e-47 |
| Msa0574890 | Msa1340510 | 0.822911 | 1.838404e-53 | -8.615850e-47 |
| Msa0579720 | Msa1340510 | 0.804119 | 2.516965e-49 | -8.615850e-47 |
| Msa0585920 | Msa1340510 | 0.805340 | 1.399536e-49 | -8.615850e-47 |
| Msa0846140 | Msa1340510 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0850960 | Msa1340510 | 0.812513 | 4.083185e-51 | -8.615850e-47 |
| Msa0864010 | Msa1340510 | 0.803028 | 4.237415e-49 | -8.615850e-47 |
| Msa0930780 | Msa1340510 | 0.848768 | 4.965036e-60 | -8.615850e-47 |
| Msa0937670 | Msa1340510 | 0.814377 | 1.589249e-51 | -8.615850e-47 |
| Msa0948250 | Msa1340510 | 0.810442 | 1.150541e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340510 | MtrunA17_Chr7g0252151 | 89.489 | 1037 | 18 | 5 | 1 | 967 | 46 | 1061 | 0.0 | 1877 |
| Msa1340510 | MtrunA17_Chr3g0131651 | 65.784 | 1020 | 250 | 8 | 14 | 957 | 18 | 1014 | 0.0 | 1358 |
| Msa1340510 | MtrunA17_Chr7g0252171 | 62.963 | 1026 | 284 | 7 | 6 | 958 | 6 | 1008 | 0.0 | 1304 |
| Msa1340510 | MtrunA17_Chr8g0371581 | 55.674 | 1031 | 353 | 14 | 6 | 957 | 13 | 1018 | 0.0 | 1136 |
| Msa1340510 | MtrunA17_Chr6g0451931 | 27.458 | 885 | 451 | 25 | 36 | 794 | 138 | 957 | 2.64e-72 | 260 |
| Msa1340510 | MtrunA17_Chr3g0081881 | 79.592 | 49 | 10 | 0 | 48 | 96 | 11 | 59 | 1.02e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340510 | AT5G13980.1 | 64.451 | 1038 | 260 | 13 | 1 | 958 | 3 | 1011 | 0.0 | 1350 |
| Msa1340510 | AT5G13980.2 | 64.451 | 1038 | 260 | 13 | 1 | 958 | 3 | 1011 | 0.0 | 1350 |
| Msa1340510 | AT5G13980.3 | 66.456 | 948 | 235 | 11 | 1 | 894 | 3 | 921 | 0.0 | 1286 |
| Msa1340510 | AT3G26720.1 | 60.680 | 1030 | 307 | 10 | 1 | 958 | 1 | 1004 | 0.0 | 1273 |
| Msa1340510 | AT3G26720.2 | 61.117 | 967 | 300 | 9 | 1 | 916 | 1 | 942 | 0.0 | 1212 |
| Msa1340510 | AT3G26720.5 | 61.186 | 961 | 299 | 8 | 1 | 912 | 1 | 936 | 0.0 | 1212 |
| Msa1340510 | AT3G26720.3 | 61.758 | 944 | 287 | 8 | 1 | 895 | 1 | 919 | 0.0 | 1204 |
| Msa1340510 | AT3G26720.4 | 61.824 | 943 | 286 | 8 | 1 | 894 | 1 | 918 | 0.0 | 1203 |
| Msa1340510 | AT5G66150.2 | 53.854 | 1025 | 360 | 9 | 23 | 957 | 33 | 1034 | 0.0 | 1097 |
| Msa1340510 | AT5G66150.1 | 53.801 | 1026 | 360 | 9 | 23 | 957 | 33 | 1035 | 0.0 | 1097 |
| Msa1340510 | AT5G66150.3 | 49.869 | 764 | 269 | 9 | 285 | 957 | 1 | 741 | 0.0 | 729 |
| Msa1340510 | AT5G14950.1 | 25.558 | 896 | 457 | 27 | 36 | 794 | 152 | 974 | 1.24e-63 | 235 |
Find 215 sgRNAs with CRISPR-Local
Find 929 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAAGAAAATTCGAAATT+TGG | 0.160034 | tig0004173:+2911 | Msa1340510:intergenic |
| CTATTATGTCAAGGCATATT+TGG | 0.161062 | tig0004173:-10434 | Msa1340510:CDS |
| CTGAATTACCTTTACTATTC+AGG | 0.167164 | tig0004173:-9890 | Msa1340510:CDS |
| AGCTCCACAGTTAGCTCTTT+TGG | 0.172212 | tig0004173:+694 | Msa1340510:intergenic |
| GCAAAATATCCAAGAATTAA+AGG | 0.186569 | tig0004173:+514 | Msa1340510:intergenic |
| ATTTCATAAGCTTGTTTAAA+AGG | 0.188800 | tig0004173:+568 | Msa1340510:intergenic |
| AACATTTATGGAAGCTGTTT+TGG | 0.203392 | tig0004173:+468 | Msa1340510:intergenic |
| TGCTGTGCAGGCTTATTTAT+TGG | 0.204774 | tig0004173:-13536 | Msa1340510:CDS |
| AGTCTGAAGCCTTTAATTCT+TGG | 0.215604 | tig0004173:-523 | Msa1340510:three_prime_UTR |
| GTTTCTTGCATTAACATAAT+TGG | 0.217083 | tig0004173:+10106 | Msa1340510:intergenic |
| ATTAATGAGTGGCTATTATT+TGG | 0.217723 | tig0004173:-11908 | Msa1340510:intron |
| CAGATCGTGCAAATGGTTTC+TGG | 0.225600 | tig0004173:-11975 | Msa1340510:CDS |
| ACTTGTTGAAACTTTGTAAC+TGG | 0.229637 | tig0004173:+11475 | Msa1340510:intergenic |
| CACTCGGATTTCAACTACTA+TGG | 0.233395 | tig0004173:-3979 | Msa1340510:CDS |
| TTCTATGGTTCATGCTCTAT+TGG | 0.267475 | tig0004173:-14401 | Msa1340510:CDS |
| GTTGAATCAACATCGGTTAC+TGG | 0.283082 | tig0004173:-11508 | Msa1340510:CDS |
| CATTGTTATTATAACATTAC+AGG | 0.284184 | tig0004173:-2012 | Msa1340510:intron |
| TGGTTCCAACAATTCTATTC+AGG | 0.292291 | tig0004173:-14536 | Msa1340510:intron |
| GCTGTGCAGGCTTATTTATT+GGG | 0.295067 | tig0004173:-13535 | Msa1340510:CDS |
| GTTACTACTATCAAAGTAAA+TGG | 0.302432 | tig0004173:+645 | Msa1340510:intergenic |
| TCAGCTAATGAGTCTGTATT+TGG | 0.303542 | tig0004173:+11750 | Msa1340510:intergenic |
| TCAATTTGCCAACCAATTCT+TGG | 0.320808 | tig0004173:+13574 | Msa1340510:intergenic |
| GCAAAATGTGTTGGATTCTA+TGG | 0.320839 | tig0004173:-14416 | Msa1340510:CDS |
| GTGTTCTTCCAGATCTTTGC+TGG | 0.324479 | tig0004173:-13176 | Msa1340510:intron |
| TAAGACAGAATTCTCAGTTT+TGG | 0.326220 | tig0004173:-3335 | Msa1340510:CDS |
| AGACTTGTTTGGAAAGTAGA+AGG | 0.327254 | tig0004173:-760 | Msa1340510:CDS |
| GCTAAATGGCGCCGTACTTT+TGG | 0.328700 | tig0004173:-2246 | Msa1340510:CDS |
| ACGTAAGAATGGAACTTGTT+AGG | 0.332221 | tig0004173:-401 | Msa1340510:three_prime_UTR |
| GAAGTGCACCAGCCCGTTGC+TGG | 0.334798 | tig0004173:-3656 | Msa1340510:CDS |
| CTCTGTGCAGGCAGAGGAAC+TGG | 0.344974 | tig0004173:-11554 | Msa1340510:intron |
| ACCTCACAGGGTGTAGTCTC+TGG | 0.347973 | tig0004173:-14634 | Msa1340510:CDS |
| CTTATAAGATGTGTTCCATT+TGG | 0.349662 | tig0004173:+9718 | Msa1340510:intergenic |
| TGGAGAAGAAAAGACTTGTT+TGG | 0.356314 | tig0004173:-771 | Msa1340510:CDS |
| TATTATGTCAAGGCATATTT+GGG | 0.360581 | tig0004173:-10433 | Msa1340510:CDS |
| GAGAACTATGAACCTCCTTC+TGG | 0.360730 | tig0004173:-13143 | Msa1340510:CDS |
| GTTAAGCAGCTTGTTAGTTC+GGG | 0.360901 | tig0004173:-13854 | Msa1340510:CDS |
| TCAGTTTCTGTACCACCATT+TGG | 0.361418 | tig0004173:-10370 | Msa1340510:CDS |
| AGATAGGAATAAACGCAAAA+AGG | 0.361623 | tig0004173:-13384 | Msa1340510:CDS |
| AGTTAAGCAGCTTGTTAGTT+CGG | 0.361974 | tig0004173:-13855 | Msa1340510:CDS |
| AGAAGAGTCTTGAGGTTATC+TGG | 0.364575 | tig0004173:-13361 | Msa1340510:CDS |
| TTACCAACTCCATCTTCAAT+AGG | 0.369060 | tig0004173:+4011 | Msa1340510:intergenic |
| CGAACTCCTCTTTCAGAAAT+CGG | 0.375393 | tig0004173:+13605 | Msa1340510:intergenic |
| CTGAATAAGTGAGTAATTTG+AGG | 0.381059 | tig0004173:-373 | Msa1340510:three_prime_UTR |
| TTGTCCTTTCAGATTAATCT+TGG | 0.387749 | tig0004173:-3376 | Msa1340510:intron |
| TTCGATTTGACTCCAAGAAT+TGG | 0.390690 | tig0004173:-13586 | Msa1340510:CDS |
| TGAAAATGCAAGCCAATACT+TGG | 0.393326 | tig0004173:+10390 | Msa1340510:intergenic |
| AATGACCTGAATAGAATTGT+TGG | 0.398399 | tig0004173:+14531 | Msa1340510:intergenic |
| ATTGTGGTTTATAACTCTCT+TGG | 0.398651 | tig0004173:-11074 | Msa1340510:CDS |
| CTTTGGGTGAGGGAGCTAAA+TGG | 0.399736 | tig0004173:-2260 | Msa1340510:CDS |
| TTCGTCATCACTGGCTTGCT+TGG | 0.400499 | tig0004173:-11530 | Msa1340510:CDS |
| TGGGAAGCTCAATGTTCATC+TGG | 0.400751 | tig0004173:-14614 | Msa1340510:CDS |
| CTCTATTGGCTGATAAGAAC+AGG | 0.401356 | tig0004173:-14387 | Msa1340510:CDS |
| TTCTATAATAATATTTCCCT+TGG | 0.402828 | tig0004173:+2289 | Msa1340510:intergenic |
| TGAATTACCTTTACTATTCA+GGG | 0.412178 | tig0004173:-9889 | Msa1340510:CDS |
| CCTCCGGTTTACGTGGGAAA+AGG | 0.413149 | tig0004173:-436 | Msa1340510:three_prime_UTR |
| GTAGGATCGATTACCAAGAT+AGG | 0.415011 | tig0004173:-13400 | Msa1340510:CDS |
| CTTCAAATTTCCTTGACCTA+TGG | 0.416316 | tig0004173:+10160 | Msa1340510:intergenic |
| AAAGTGGAGAATATATTTCC+TGG | 0.425358 | tig0004173:+2223 | Msa1340510:intergenic |
| CTTTACTATTCAGGGTATAA+CGG | 0.429029 | tig0004173:-9881 | Msa1340510:CDS |
| GTTTGGACATTCTGCTGTGC+AGG | 0.429270 | tig0004173:-13548 | Msa1340510:CDS |
| GGTTGGCAAATTGACCCGTT+TGG | 0.434705 | tig0004173:-13565 | Msa1340510:CDS |
| GAAGGAGGTTCATAGTTCTC+AGG | 0.436622 | tig0004173:+13146 | Msa1340510:intergenic |
| CTGGAAATGGAGGTGTTTCA+AGG | 0.438959 | tig0004173:-732 | Msa1340510:CDS |
| TTATTATAGAATAGACCCTT+TGG | 0.439735 | tig0004173:-2277 | Msa1340510:CDS |
| AACTTGAGGCTTTAGAGCTC+TGG | 0.441648 | tig0004173:-2942 | Msa1340510:CDS |
| AATCACATTATGTGGACAAT+GGG | 0.443770 | tig0004173:-12396 | Msa1340510:CDS |
| GTAGAAGGGTCCTCTGGAAA+TGG | 0.445460 | tig0004173:-745 | Msa1340510:CDS |
| TGAACAATAGTTGAAAATCA+AGG | 0.446530 | tig0004173:+263 | Msa1340510:intergenic |
| GGGTAATAATTTCCAGCAAC+GGG | 0.449669 | tig0004173:+3644 | Msa1340510:intergenic |
| TTTACGTGGGAAAAGGGCTA+TGG | 0.451843 | tig0004173:-429 | Msa1340510:three_prime_UTR |
| TATGCTAAACGATTGGCAAT+AGG | 0.452324 | tig0004173:-11660 | Msa1340510:CDS |
| ACTCCATCTTCAATAGGTAT+AGG | 0.454189 | tig0004173:+4017 | Msa1340510:intergenic |
| ATCAAGCAGCAACCTCCTAT+TGG | 0.456051 | tig0004173:+2888 | Msa1340510:intergenic |
| TATTATAGAATAGACCCTTT+GGG | 0.458271 | tig0004173:-2276 | Msa1340510:CDS |
| AAACATTTGCAGGTTATTGA+TGG | 0.459153 | tig0004173:-10541 | Msa1340510:intron |
| GCTTATATCTTCCGTCCAAA+TGG | 0.464533 | tig0004173:-9733 | Msa1340510:CDS |
| CATAAAAGAGAATTCCCAAA+AGG | 0.468108 | tig0004173:+14686 | Msa1340510:intergenic |
| TAATTTCTGTAACAGAATGC+TGG | 0.468169 | tig0004173:-9757 | Msa1340510:intron |
| TTTCCATATTCAGGTTATTG+TGG | 0.471363 | tig0004173:-11090 | Msa1340510:intron |
| TGTCCTTTCAGATTAATCTT+GGG | 0.474577 | tig0004173:-3375 | Msa1340510:intron |
| ATAACTCTCTTGGTTGGAAG+AGG | 0.474966 | tig0004173:-11064 | Msa1340510:CDS |
| ATAAGCTTGTTTAAAAGGCA+AGG | 0.476872 | tig0004173:+573 | Msa1340510:intergenic |
| AGTTATTCAGATCGTGCAAA+TGG | 0.477887 | tig0004173:-11982 | Msa1340510:CDS |
| CATCCAAGACACCCAAGTAT+TGG | 0.478995 | tig0004173:-10402 | Msa1340510:CDS |
| GGAACTGGTTTCGTCATCAC+TGG | 0.480083 | tig0004173:-11539 | Msa1340510:CDS |
| CTTGTTGAAACTTTGTAACT+GGG | 0.480817 | tig0004173:+11476 | Msa1340510:intergenic |
| TCCTTTCAGGAACTTGATCA+AGG | 0.483430 | tig0004173:-1762 | Msa1340510:intron |
| AGAATCTCAAATTCTACCTC+TGG | 0.484241 | tig0004173:-10482 | Msa1340510:CDS |
| AACTGTGGAGCTTGCTCCAA+TGG | 0.484793 | tig0004173:-683 | Msa1340510:CDS |
| TAAAGACATTACGACATGTA+AGG | 0.485293 | tig0004173:+338 | Msa1340510:intergenic |
| CGTGCAAATGGTTTCTGGAC+AGG | 0.485426 | tig0004173:-11970 | Msa1340510:CDS |
| GAGCCTCGGTTCATCTGCTC+AGG | 0.488230 | tig0004173:-13327 | Msa1340510:intron |
| AAGAAATCGTCAGTCTTGAT+TGG | 0.489756 | tig0004173:+12106 | Msa1340510:intergenic |
| CTGACATAGCGTTTCAAAGC+TGG | 0.497109 | tig0004173:+11931 | Msa1340510:intergenic |
| GCGTTTCAAAGCTGGTCTAC+TGG | 0.497765 | tig0004173:+11939 | Msa1340510:intergenic |
| GTAAAAGTGCGGATTTCCAT+TGG | 0.501131 | tig0004173:+667 | Msa1340510:intergenic |
| GATTTGCCCATCTTCTAAGC+TGG | 0.501303 | tig0004173:+3291 | Msa1340510:intergenic |
| TTTAGAGGGCGAAAGAACTC+AGG | 0.501312 | tig0004173:-11774 | Msa1340510:CDS |
| TACCAGACAGTACAAAGAAA+AGG | 0.505652 | tig0004173:-4252 | Msa1340510:CDS |
| AATAATTTCCAGCAACGGGC+TGG | 0.505914 | tig0004173:+3648 | Msa1340510:intergenic |
| AGAATAGACCCTTTGGGTGA+GGG | 0.506802 | tig0004173:-2270 | Msa1340510:CDS |
| CTATGGGTTCCACGTAAGAA+TGG | 0.506943 | tig0004173:-412 | Msa1340510:three_prime_UTR |
| CTCCGGTTTACGTGGGAAAA+GGG | 0.506978 | tig0004173:-435 | Msa1340510:three_prime_UTR |
| ATCCTGAAAATGTTGTTACA+TGG | 0.508095 | tig0004173:+2063 | Msa1340510:intergenic |
| CTACAGAACAGACTGGGACT+TGG | 0.508692 | tig0004173:-3678 | Msa1340510:CDS |
| CTGTGCCGGTGACTGCATCA+TGG | 0.509159 | tig0004173:+11706 | Msa1340510:intergenic |
| TTTATCAATTGAGATGTCCA+TGG | 0.509590 | tig0004173:-319 | Msa1340510:three_prime_UTR |
| TAGAATAGACCCTTTGGGTG+AGG | 0.510130 | tig0004173:-2271 | Msa1340510:CDS |
| AAGTGTATAAACTGATGATC+TGG | 0.510611 | tig0004173:+10202 | Msa1340510:intergenic |
| CAATACTTGGGTGTCTTGGA+TGG | 0.512823 | tig0004173:+10403 | Msa1340510:intergenic |
| GAACAGGAAATTTATCTATG+TGG | 0.515196 | tig0004173:-14371 | Msa1340510:CDS |
| GGTGTTATACTCTATAAACT+TGG | 0.516701 | tig0004173:+14654 | Msa1340510:intergenic |
| CTCGGACAAATCACATTATG+TGG | 0.518821 | tig0004173:-12404 | Msa1340510:CDS |
| TGCACAGCAGAATGTCCAAA+CGG | 0.521779 | tig0004173:+13550 | Msa1340510:intergenic |
| AATCTTTGTGTGAATTTATG+TGG | 0.523347 | tig0004173:+14815 | Msa1340510:intergenic |
| TCGGAAAAGGCTAACAAAAG+TGG | 0.525918 | tig0004173:+2207 | Msa1340510:intergenic |
| AACTCTTCACACTCCAGAAG+CGG | 0.528737 | tig0004173:+14766 | Msa1340510:intergenic |
| CGTTATACCCTGAATAGTAA+AGG | 0.531274 | tig0004173:+9882 | Msa1340510:intergenic |
| AAGCCAATACTTGGGTGTCT+TGG | 0.535952 | tig0004173:+10399 | Msa1340510:intergenic |
| TGGTTTATAACTCTCTTGGT+TGG | 0.536231 | tig0004173:-11070 | Msa1340510:CDS |
| TTATCAATTGAGATGTCCAT+GGG | 0.537362 | tig0004173:-318 | Msa1340510:three_prime_UTR |
| ATAAAAGAGAATTCCCAAAA+GGG | 0.539238 | tig0004173:+14687 | Msa1340510:intergenic |
| TCTTATAAGTCATGAAAGAC+AGG | 0.539510 | tig0004173:-9704 | Msa1340510:intron |
| ATATTTCCTGGCCAAAAGTA+CGG | 0.540811 | tig0004173:+2235 | Msa1340510:intergenic |
| CGTATAAATGCGCTAATCGA+AGG | 0.540840 | tig0004173:+1730 | Msa1340510:intergenic |
| GGCTTGTGTGCAAAATGTGT+TGG | 0.541656 | tig0004173:-14425 | Msa1340510:CDS |
| TGGAAAGTAGAAGGGTCCTC+TGG | 0.542542 | tig0004173:-751 | Msa1340510:CDS |
| AAATCACATTATGTGGACAA+TGG | 0.545205 | tig0004173:-12397 | Msa1340510:CDS |
| TGGAAATGGAGGTGTTTCAA+GGG | 0.545678 | tig0004173:-731 | Msa1340510:CDS |
| TCCTGAAAATGTTGTTACAT+GGG | 0.545787 | tig0004173:+2064 | Msa1340510:intergenic |
| TAATGATTATGCTAAACGAT+TGG | 0.546213 | tig0004173:-11667 | Msa1340510:CDS |
| ACTGTTGATCAGTACTATGT+TGG | 0.549819 | tig0004173:-14556 | Msa1340510:CDS |
| ATTTGACTCCAAGAATTGGT+TGG | 0.549978 | tig0004173:-13582 | Msa1340510:CDS |
| GCTTATCTGCAAATCAAGAA+AGG | 0.550208 | tig0004173:-801 | Msa1340510:CDS |
| GCACAGCAGAATGTCCAAAC+GGG | 0.551546 | tig0004173:+13551 | Msa1340510:intergenic |
| TGGACACCGATTTCTGAAAG+AGG | 0.552492 | tig0004173:-13611 | Msa1340510:CDS |
| AAATCGAGTTGATGCTCCAC+AGG | 0.552903 | tig0004173:-3273 | Msa1340510:intron |
| ATTTAGCTCCCTCACCCAAA+GGG | 0.553112 | tig0004173:+2262 | Msa1340510:intergenic |
| GACATTACGACATGTAAGGT+TGG | 0.553188 | tig0004173:+342 | Msa1340510:intergenic |
| GGAGGATCCAGCTTAGAAGA+TGG | 0.554711 | tig0004173:-3298 | Msa1340510:CDS |
| TGGGTAATAATTTCCAGCAA+CGG | 0.556408 | tig0004173:+3643 | Msa1340510:intergenic |
| TAAGATGTGTTCCATTTGGA+CGG | 0.558123 | tig0004173:+9722 | Msa1340510:intergenic |
| TCAAATTCTACCTCTGGCTG+AGG | 0.558671 | tig0004173:-10476 | Msa1340510:CDS |
| GTGTAAGTGCTAAAACCAAA+TGG | 0.559441 | tig0004173:+10355 | Msa1340510:intergenic |
| TATAGAGTATAACACCTCAC+AGG | 0.564100 | tig0004173:-14647 | Msa1340510:CDS |
| GGTCCTATACCTATTGAAGA+TGG | 0.564137 | tig0004173:-4020 | Msa1340510:CDS |
| TTACGTGGGAAAAGGGCTAT+GGG | 0.568630 | tig0004173:-428 | Msa1340510:three_prime_UTR |
| ATGATTGATCAGACTACACT+TGG | 0.569418 | tig0004173:-13631 | Msa1340510:CDS |
| TCAGACTTTACAACTATGAC+AGG | 0.569449 | tig0004173:+539 | Msa1340510:intergenic |
| AGTATCAATACGCACATACA+TGG | 0.569841 | tig0004173:-12362 | Msa1340510:CDS |
| AAGGAGGTTCATAGTTCTCA+GGG | 0.570158 | tig0004173:+13147 | Msa1340510:intergenic |
| CCTCACAGGGTGTAGTCTCT+GGG | 0.571763 | tig0004173:-14633 | Msa1340510:CDS |
| CATTTAGCTCCCTCACCCAA+AGG | 0.572359 | tig0004173:+2261 | Msa1340510:intergenic |
| ATACCTATTGAAGATGGAGT+TGG | 0.572453 | tig0004173:-4014 | Msa1340510:CDS |
| GAGGATCCAGCTTAGAAGAT+GGG | 0.572606 | tig0004173:-3297 | Msa1340510:CDS |
| AGTCTTGAGGTTATCTGGCA+AGG | 0.579058 | tig0004173:-13356 | Msa1340510:CDS |
| ACGATTGGCAATAGGCTACA+AGG | 0.579394 | tig0004173:-11652 | Msa1340510:CDS |
| AGTCATGAAAAGTCTTCCAT+AGG | 0.579693 | tig0004173:-10176 | Msa1340510:CDS |
| ATTGATTTGAATTGTCCCCA+TGG | 0.581279 | tig0004173:+302 | Msa1340510:intergenic |
| GAAAAGTCTTCCATAGGTCA+AGG | 0.583359 | tig0004173:-10170 | Msa1340510:CDS |
| GACTTGTTTGGAAAGTAGAA+GGG | 0.584116 | tig0004173:-759 | Msa1340510:CDS |
| GCTCATACTCATGATGATGT+TGG | 0.588207 | tig0004173:-14589 | Msa1340510:CDS |
| CAACACCATGATGCAGTCAC+CGG | 0.591654 | tig0004173:-11711 | Msa1340510:CDS |
| TTTGCATCTGTATATATGGA+GGG | 0.592290 | tig0004173:+12151 | Msa1340510:intergenic |
| TACGTGACTACAGAACAGAC+TGG | 0.596442 | tig0004173:-3685 | Msa1340510:CDS |
| GGTAGGATGATAAAGATGAC+TGG | 0.599141 | tig0004173:-2094 | Msa1340510:intron |
| CCTTTCAGGAACTTGATCAA+GGG | 0.599608 | tig0004173:-1761 | Msa1340510:intron |
| GAAAGAAGAGTACTTCCACT+TGG | 0.605700 | tig0004173:+14844 | Msa1340510:intergenic |
| TCAGGAACTTGATCAAGGGA+CGG | 0.606166 | tig0004173:-1757 | Msa1340510:intron |
| AAATCAAGAAAGGACAGAGA+TGG | 0.607796 | tig0004173:-791 | Msa1340510:CDS |
| TCTAAGAAACTATTATGTCA+AGG | 0.610906 | tig0004173:-10443 | Msa1340510:CDS |
| ACATACATGGTACCGACAGT+TGG | 0.612842 | tig0004173:-12349 | Msa1340510:CDS |
| TTATGTTAATGCAAGAAACA+TGG | 0.614150 | tig0004173:-10102 | Msa1340510:intron |
| TGTATAAACTGATGATCTGG+TGG | 0.614284 | tig0004173:+10205 | Msa1340510:intergenic |
| GTATTAGATCAAAGAAGTGA+AGG | 0.615994 | tig0004173:-830 | Msa1340510:intron |
| AATATGCTGCAAATGAGTCA+TGG | 0.618901 | tig0004173:-12129 | Msa1340510:CDS |
| TTGCTTGGTTGAATCAACAT+CGG | 0.621818 | tig0004173:-11515 | Msa1340510:CDS |
| GGAAATGGAGGTGTTTCAAG+GGG | 0.622441 | tig0004173:-730 | Msa1340510:CDS |
| TTGCTGCTTGATGATTCTAG+AGG | 0.624603 | tig0004173:-2877 | Msa1340510:CDS |
| CGCTATGTCAGATTAATGAG+TGG | 0.627187 | tig0004173:-11919 | Msa1340510:CDS |
| TGGCAAGGTAGCAAGAGCCT+CGG | 0.630943 | tig0004173:-13341 | Msa1340510:CDS |
| TCAAAGTAAAATCCAGAAGG+AGG | 0.631190 | tig0004173:+13131 | Msa1340510:intergenic |
| TTAGAGGGCGAAAGAACTCA+GGG | 0.634363 | tig0004173:-11773 | Msa1340510:CDS |
| GAAAATGCAAGCCAATACTT+GGG | 0.635413 | tig0004173:+10391 | Msa1340510:intergenic |
| GAAGGGTCCTCTGGAAATGG+AGG | 0.635637 | tig0004173:-742 | Msa1340510:CDS |
| CAAAGTAAATGGTAAAAGTG+CGG | 0.638098 | tig0004173:+656 | Msa1340510:intergenic |
| CACTGTGCATGATAACCAAG+TGG | 0.640253 | tig0004173:-14859 | Msa1340510:five_prime_UTR |
| CTGTGTTGCTGACAATTGCA+AGG | 0.641022 | tig0004173:-2827 | Msa1340510:CDS |
| ATACTCATGATGATGTTGGA+TGG | 0.641633 | tig0004173:-14585 | Msa1340510:CDS |
| ACTTCAAAGTAAAATCCAGA+AGG | 0.641851 | tig0004173:+13128 | Msa1340510:intergenic |
| TGAAACACCTCCATTTCCAG+AGG | 0.645145 | tig0004173:+735 | Msa1340510:intergenic |
| TTTAACCCTCCGGTTTACGT+GGG | 0.647513 | tig0004173:-442 | Msa1340510:three_prime_UTR |
| AATGGAGGTGTTTCAAGGGG+AGG | 0.649350 | tig0004173:-727 | Msa1340510:CDS |
| GAATGAGCTTGTCCAACTGT+CGG | 0.650516 | tig0004173:+12337 | Msa1340510:intergenic |
| GCTCATTCATTACGTGAACA+AGG | 0.651468 | tig0004173:-12322 | Msa1340510:intron |
| TTTCCATGTCACAGAAACGG+TGG | 0.654844 | tig0004173:-13694 | Msa1340510:intron |
| TTGGTGGATAGAGCTATAGG+AGG | 0.655512 | tig0004173:-3316 | Msa1340510:CDS |
| ACGTGACTACAGAACAGACT+GGG | 0.657692 | tig0004173:-3684 | Msa1340510:CDS |
| CCCAGAGACTACACCCTGTG+AGG | 0.659344 | tig0004173:+14633 | Msa1340510:intergenic |
| TGATTCTAGAGGTGTTGCAG+AGG | 0.660259 | tig0004173:-2866 | Msa1340510:CDS |
| CGGCACAGAAAAGCAGCACG+TGG | 0.665131 | tig0004173:-11691 | Msa1340510:CDS |
| TTGGTAAAGAAGTTTCCACT+CGG | 0.667704 | tig0004173:-3995 | Msa1340510:CDS |
| GTTACAGTTCATGACTCCAA+CGG | 0.668698 | tig0004173:-10514 | Msa1340510:CDS |
| CATAGTAGTTGAAATCCGAG+TGG | 0.668936 | tig0004173:+3980 | Msa1340510:intergenic |
| TCGATTAGCGCATTTATACG+AGG | 0.670614 | tig0004173:-1727 | Msa1340510:intron |
| TAACAAGTTCCATTCTTACG+TGG | 0.672122 | tig0004173:+403 | Msa1340510:intergenic |
| TGTGTTGCTGACAATTGCAA+GGG | 0.677060 | tig0004173:-2826 | Msa1340510:CDS |
| TCTACAAATACCTCAGCCAG+AGG | 0.690237 | tig0004173:+10466 | Msa1340510:intergenic |
| TCACCTGAGCAGATGAACCG+AGG | 0.700248 | tig0004173:+13324 | Msa1340510:intergenic |
| TGGCATGTGTATGCATGATG+AGG | 0.703361 | tig0004173:-13674 | Msa1340510:CDS |
| ATAGAGTATAACACCTCACA+GGG | 0.705260 | tig0004173:-14646 | Msa1340510:CDS |
| TAAGTGCTAAAACCAAATGG+TGG | 0.707183 | tig0004173:+10358 | Msa1340510:intergenic |
| TGATCCAAAAGAGCTAACTG+TGG | 0.718341 | tig0004173:-698 | Msa1340510:CDS |
| TATCAATTGAGATGTCCATG+GGG | 0.759459 | tig0004173:-317 | Msa1340510:three_prime_UTR |
| ATTGGCAATAGGCTACAAGG+AGG | 0.782057 | tig0004173:-11649 | Msa1340510:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTCTTTTTTATAAATT+AGG | + | tig0004173:299-318 | Msa1115500:intergenic | 10.0% |
| !!! | TTATAGTTTAAGTTTATATA+AGG | - | tig0004173:3398-3417 | Msa1340510:intron | 10.0% |
| !! | ATATTTATAATGCATAAAAA+AGG | - | tig0004173:12303-12322 | Msa1340510:intron | 10.0% |
| !! | ATAAATTATTAGTGAAAATA+GGG | + | tig0004173:13860-13879 | Msa1340510:intergenic | 10.0% |
| !! | AATAAATTATTAGTGAAAAT+AGG | + | tig0004173:13861-13880 | Msa1340510:intergenic | 10.0% |
| !!! | TTCTGAAATTTTAAAAATTT+GGG | + | tig0004173:13918-13937 | Msa1340510:intergenic | 10.0% |
| !!! | CTATCACTTTTTTTTTTTTT+TGG | - | tig0004173:2216-2235 | Msa1340510:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTGGTATTC+TGG | - | tig0004173:2224-2243 | Msa1340510:CDS | 15.0% |
| !!! | TGAACAATATATATGATTTT+TGG | - | tig0004173:2375-2394 | Msa1340510:intron | 15.0% |
| !! | ATAATTACATATTAAACTCA+CGG | + | tig0004173:3190-3209 | Msa1340510:intergenic | 15.0% |
| !!! | ATTACTTCATTTTGATATTT+GGG | + | tig0004173:8596-8615 | Msa1340510:intergenic | 15.0% |
| !!! | AATTACTTCATTTTGATATT+TGG | + | tig0004173:8597-8616 | Msa1340510:intergenic | 15.0% |
| !! | AAGTAATTCAAATTTAGATT+TGG | - | tig0004173:8609-8628 | Msa1340510:intron | 15.0% |
| !! | ATTATCTTCATATTTCTTAT+TGG | - | tig0004173:11472-11491 | Msa1340510:intron | 15.0% |
| !! | TTAAATCATTGGTATTATAA+AGG | - | tig0004173:12244-12263 | Msa1340510:intron | 15.0% |
| !!! | CTTCTGAAATTTTAAAAATT+TGG | + | tig0004173:13919-13938 | Msa1340510:intergenic | 15.0% |
| !!! | TTTTAATTTTGCAATGTGTA+GGG | - | tig0004173:821-840 | Msa1340510:CDS | 20.0% |
| !!! | ACTGAAAAAGTTGATTTTTT+TGG | - | tig0004173:1026-1045 | Msa1340510:intron | 20.0% |
| !!! | CTGAAAAAGTTGATTTTTTT+GGG | - | tig0004173:1027-1046 | Msa1340510:intron | 20.0% |
| !! | AAGAATTGTACAAATATACA+TGG | + | tig0004173:1203-1222 | Msa1340510:intergenic | 20.0% |
| !!! | ATATATGATTTTTGGATACA+AGG | - | tig0004173:2383-2402 | Msa1340510:intron | 20.0% |
| !! | AAACAAATTCTTCTTATCTA+AGG | + | tig0004173:3029-3048 | Msa1340510:intergenic | 20.0% |
| !!! | ATATTTTGCATCTGTATATA+TGG | + | tig0004173:3125-3144 | Msa1340510:intergenic | 20.0% |
| !! | TAATTACATATTAAACTCAC+GGG | + | tig0004173:3189-3208 | Msa1340510:intergenic | 20.0% |
| !!! | TTTTATACCGATAAATTATC+AGG | - | tig0004173:3452-3471 | Msa1340510:intron | 20.0% |
| !! | ACATACTAACAATTGAATAT+AGG | + | tig0004173:3679-3698 | Msa1340510:intergenic | 20.0% |
| !!! | TTTTTTTTTGAAAAGACGTA+TGG | - | tig0004173:4498-4517 | Msa1340510:intron | 20.0% |
| !!! | TATGGTGTTTTTTAATTTGT+AGG | - | tig0004173:4516-4535 | Msa1340510:intron | 20.0% |
| !!! | TTAAAAGTGATTGAATTTTC+AGG | - | tig0004173:5647-5666 | Msa1340510:intron | 20.0% |
| !! | ATTACACAATCAAGTTAATA+AGG | + | tig0004173:5962-5981 | Msa1340510:intergenic | 20.0% |
| !! | AGAGTTCTTAAATATCTTAA+AGG | + | tig0004173:6522-6541 | Msa1340510:intergenic | 20.0% |
| !! | TAATCAAGCTTTCAAAATTA+AGG | + | tig0004173:6865-6884 | Msa1340510:intergenic | 20.0% |
| !! | AAATGGTATGAAAAATTAAC+TGG | + | tig0004173:7044-7063 | Msa1340510:intergenic | 20.0% |
| !!! | ATTCATTTCTTTAAAGTGTT+TGG | + | tig0004173:8118-8137 | Msa1340510:intergenic | 20.0% |
| !!! | TCTGATTTTTATACTTCAAA+AGG | + | tig0004173:8370-8389 | Msa1340510:intergenic | 20.0% |
| !! | AAAATATTTATGTCCATGAA+TGG | - | tig0004173:8552-8571 | Msa1340510:intron | 20.0% |
| !!! | TTACTTCATTTTGATATTTG+GGG | + | tig0004173:8595-8614 | Msa1340510:intergenic | 20.0% |
| !! | TTTATTATCAACAGAAATAG+AGG | - | tig0004173:8699-8718 | Msa1340510:intron | 20.0% |
| !! | TTATTATCAACAGAAATAGA+GGG | - | tig0004173:8700-8719 | Msa1340510:intron | 20.0% |
| !!! | ATCAAATTGACTTTAAAATG+TGG | - | tig0004173:9048-9067 | Msa1340510:intron | 20.0% |
| !!! | CTTGAATTATTTTTAGATTG+AGG | - | tig0004173:9591-9610 | Msa1340510:intron | 20.0% |
| !! | ATTACACAATCAAGTTAATA+AGG | + | tig0004173:5962-5981 | Msa1340510:intergenic | 20.0% |
| !! | ACACAAATGTAAATATAGAT+GGG | + | tig0004173:11084-11103 | Msa1340510:intergenic | 20.0% |
| !!! | ACTGTTTGATTTTTCTTATA+TGG | - | tig0004173:11170-11189 | Msa1340510:intron | 20.0% |
| !!! | ATCTGTGTAAAAAGTTTTAT+TGG | + | tig0004173:11319-11338 | Msa1340510:intergenic | 20.0% |
| !!! | AAGTTGCATATTTTATCATA+TGG | + | tig0004173:11785-11804 | Msa1340510:intergenic | 20.0% |
| !! | ACTGTAAATTCAAGTATATT+TGG | + | tig0004173:12072-12091 | Msa1340510:intergenic | 20.0% |
| !! | TGAAAAGAAAATTCGAAATT+TGG | + | tig0004173:12361-12380 | Msa1340510:intergenic | 20.0% |
| !!! | TGATATATCAAAACCTTTTT+TGG | + | tig0004173:12614-12633 | Msa1340510:intergenic | 20.0% |
| !!! | GGAGTAAATTCAATTTTTTA+AGG | + | tig0004173:12772-12791 | Msa1340510:intergenic | 20.0% |
| !!! | ACTGCTTTGTAAATTAATTT+TGG | - | tig0004173:12917-12936 | Msa1340510:intron | 20.0% |
| !!! | GTAAATTAATTTTGGAAGTT+TGG | - | tig0004173:12925-12944 | Msa1340510:intron | 20.0% |
| !! | TTCTATAATAATATTTCCCT+TGG | + | tig0004173:12983-13002 | Msa1340510:intergenic | 20.0% |
| !! | ACTAAAAGATCAACTTTATT+TGG | - | tig0004173:13154-13173 | Msa1340510:CDS | 20.0% |
| !!! | GTTATAATAACAATGTTTTC+TGG | + | tig0004173:13252-13271 | Msa1340510:intergenic | 20.0% |
| !!! | CATTGTTATTATAACATTAC+AGG | - | tig0004173:13257-13276 | Msa1340510:intron | 20.0% |
| !! | GTTCAGTATAGATAAATAAA+TGG | - | tig0004173:13341-13360 | Msa1340510:CDS | 20.0% |
| !!! | AAATAAATGGTAACTGTTTT+TGG | - | tig0004173:13354-13373 | Msa1340510:CDS | 20.0% |
| !! | ATGTTATAATGGTTAAATGT+TGG | + | tig0004173:13380-13399 | Msa1340510:intergenic | 20.0% |
| !! | AACATTTAACCATTATAACA+TGG | - | tig0004173:13379-13398 | Msa1340510:CDS | 20.0% |
| !!! | ACAAAAAGATGGAAATTTTT+TGG | - | tig0004173:13814-13833 | Msa1340510:intron | 20.0% |
| !!! | ATATTTTCGGATTTAGAAAT+GGG | + | tig0004173:13892-13911 | Msa1340510:intergenic | 20.0% |
| !! | TAAACAGTACTTTAATAACA+TGG | - | tig0004173:13990-14009 | Msa1340510:intron | 20.0% |
| !!! | ATTTCATAAGCTTGTTTAAA+AGG | + | tig0004173:14704-14723 | Msa1340510:intergenic | 20.0% |
| !! | AGGGTTAAAAAAAACATTTA+TGG | + | tig0004173:14816-14835 | Msa1340510:intergenic | 20.0% |
| ! | AATCTTTGTGTGAATTTATG+TGG | + | tig0004173:457-476 | Msa1340510:intergenic | 25.0% |
| !!! | AGATCAATTTTTTCTCCATT+GGG | + | tig0004173:553-572 | Msa1340510:intergenic | 25.0% |
| !!! | AAGATCAATTTTTTCTCCAT+TGG | + | tig0004173:554-573 | Msa1340510:intergenic | 25.0% |
| !! | GGAGAAAAAATTGATCTTTT+TGG | - | tig0004173:556-575 | Msa1340510:three_prime_UTR | 25.0% |
| ! | ATAAAAGAGAATTCCCAAAA+GGG | + | tig0004173:585-604 | Msa1340510:intergenic | 25.0% |
| !!! | ACGTGTTGATTGAAAATTAA+TGG | - | tig0004173:796-815 | Msa1340510:CDS | 25.0% |
| !!! | GTTTTAATTTTGCAATGTGT+AGG | - | tig0004173:820-839 | Msa1340510:CDS | 25.0% |
| !!! | TTTAATTTTGCAATGTGTAG+GGG | - | tig0004173:822-841 | Msa1340510:CDS | 25.0% |
| ! | ACACTTCAATCCAATAAATA+TGG | + | tig0004173:974-993 | Msa1340510:intergenic | 25.0% |
| !!! | AATTTTGGGATCAAATCAAT+TGG | + | tig0004173:1155-1174 | Msa1340510:intergenic | 25.0% |
| ! | AGTTCATGTAAATCACATTT+CGG | - | tig0004173:1446-1465 | Msa1340510:intron | 25.0% |
| ! | TTCTTATCCTGTCTAATATT+TGG | - | tig0004173:1525-1544 | Msa1340510:intron | 25.0% |
| ! | TCTTATCCTGTCTAATATTT+GGG | - | tig0004173:1526-1545 | Msa1340510:intron | 25.0% |
| ! | ATTCTATGGTTGAAGATTTA+TGG | + | tig0004173:1772-1791 | Msa1340510:intergenic | 25.0% |
| ! | ACATTGTAGTAGACAAATAT+TGG | + | tig0004173:2590-2609 | Msa1340510:intergenic | 25.0% |
| ! | ATATTTGTCTACTACAATGT+TGG | - | tig0004173:2590-2609 | Msa1340510:intron | 25.0% |
| !! | TCTACTATTTAAGTTTGAAG+TGG | - | tig0004173:2768-2787 | Msa1340510:intron | 25.0% |
| !!! | TCTCGTATTGTTTTATTTTC+AGG | - | tig0004173:2833-2852 | Msa1340510:CDS | 25.0% |
| ! | ATTAATGAGTGGCTATTATT+TGG | - | tig0004173:3361-3380 | Msa1340510:CDS | 25.0% |
| !!! | AGACAGTTAGAATATTTTAG+AGG | - | tig0004173:3480-3499 | Msa1340510:intron | 25.0% |
| !!! | GACAGTTAGAATATTTTAGA+GGG | - | tig0004173:3481-3500 | Msa1340510:intron | 25.0% |
| ! | TAATGATTATGCTAAACGAT+TGG | - | tig0004173:3602-3621 | Msa1340510:intron | 25.0% |
| ! | TATAGGCAATTACTTGAATA+TGG | + | tig0004173:3662-3681 | Msa1340510:intergenic | 25.0% |
| ! | ATATGCGAGTTAAATTCTAA+AGG | + | tig0004173:3888-3907 | Msa1340510:intergenic | 25.0% |
| ! | AGAAAATGAAAAAGCAAAGA+GGG | + | tig0004173:3991-4010 | Msa1340510:intergenic | 25.0% |
| ! | AAGAAAATGAAAAAGCAAAG+AGG | + | tig0004173:3992-4011 | Msa1340510:intergenic | 25.0% |
| ! | CAATAAGTTATGTTCAAAAG+CGG | + | tig0004173:4022-4041 | Msa1340510:intergenic | 25.0% |
| !!! | TTTTCTCTTTTTCAACCATT+CGG | - | tig0004173:4112-4131 | Msa1340510:intron | 25.0% |
| ! | TAAATATGAAACAAACCGAA+TGG | + | tig0004173:4130-4149 | Msa1340510:intergenic | 25.0% |
| ! | ACTCATAACAACAAATTTCA+TGG | - | tig0004173:4326-4345 | Msa1340510:intron | 25.0% |
| ! | TCTAAGAAACTATTATGTCA+AGG | - | tig0004173:4826-4845 | Msa1340510:intron | 25.0% |
| ! | TATTATGTCAAGGCATATTT+GGG | - | tig0004173:4836-4855 | Msa1340510:intron | 25.0% |
| !!! | TATATGTGAACCTGTTTTTT+TGG | + | tig0004173:4951-4970 | Msa1340510:intergenic | 25.0% |
| ! | AATGTTCATGTTATGAACAA+GGG | + | tig0004173:5013-5032 | Msa1340510:intergenic | 25.0% |
| !!! | TTTGAAGCTTACATTTTCTA+CGG | - | tig0004173:5125-5144 | Msa1340510:intron | 25.0% |
| ! | GTTTCTTGCATTAACATAAT+TGG | + | tig0004173:5166-5185 | Msa1340510:intergenic | 25.0% |
| ! | TTATGTTAATGCAAGAAACA+TGG | - | tig0004173:5167-5186 | Msa1340510:intron | 25.0% |
| ! | TGAATTACCTTTACTATTCA+GGG | - | tig0004173:5380-5399 | Msa1340510:intron | 25.0% |
| ! | GTAATCAGAATTTCTATGTA+GGG | + | tig0004173:5618-5637 | Msa1340510:intergenic | 25.0% |
| ! | TGTAATCAGAATTTCTATGT+AGG | + | tig0004173:5619-5638 | Msa1340510:intergenic | 25.0% |
| !!! | ATTCATTAACTTGTGAATGA+AGG | - | tig0004173:5791-5810 | Msa1340510:intron | 25.0% |
| ! | TTGGAAAGTAAAAGGTTAAA+AGG | - | tig0004173:6027-6046 | Msa1340510:intron | 25.0% |
| !! | ACAATGATATTTCTGCTTAT+AGG | + | tig0004173:6662-6681 | Msa1340510:intergenic | 25.0% |
| !! | GGTAAATTGAAGTATTTCTT+GGG | + | tig0004173:6837-6856 | Msa1340510:intergenic | 25.0% |
| !! | TGGTAAATTGAAGTATTTCT+TGG | + | tig0004173:6838-6857 | Msa1340510:intergenic | 25.0% |
| ! | TGATATCATCAACATATACA+AGG | - | tig0004173:6934-6953 | Msa1340510:intron | 25.0% |
| !! | TTTTTCATACCATTTTCTAC+TGG | - | tig0004173:7049-7068 | Msa1340510:intron | 25.0% |
| ! | ATATAATCAAATTGAAGGCT+TGG | + | tig0004173:7300-7319 | Msa1340510:intergenic | 25.0% |
| ! | AAGGGATATAATCAAATTGA+AGG | + | tig0004173:7305-7324 | Msa1340510:intergenic | 25.0% |
| ! | TTCAATTTGATTATATCCCT+TGG | - | tig0004173:7304-7323 | Msa1340510:intron | 25.0% |
| ! | TGAGAAATGAAACTTGAAAT+AGG | - | tig0004173:7584-7603 | Msa1340510:intron | 25.0% |
| ! | AATAGGATACTTACAATTAC+TGG | - | tig0004173:7601-7620 | Msa1340510:intron | 25.0% |
| ! | ATACTTACAATTACTGGTAT+TGG | - | tig0004173:7607-7626 | Msa1340510:intron | 25.0% |
| !!! | TATTTCTAGTGGAAATTCTA+AGG | - | tig0004173:7687-7706 | Msa1340510:intron | 25.0% |
| !!! | ATTTCTAGTGGAAATTCTAA+GGG | - | tig0004173:7688-7707 | Msa1340510:intron | 25.0% |
| ! | TCAAAAATTGATGTAGAAAC+TGG | - | tig0004173:7866-7885 | Msa1340510:intron | 25.0% |
| ! | CAAAAATTGATGTAGAAACT+GGG | - | tig0004173:7867-7886 | Msa1340510:intron | 25.0% |
| ! | AAAAATTGATGTAGAAACTG+GGG | - | tig0004173:7868-7887 | Msa1340510:intron | 25.0% |
| !! | ACTTTAAAGAAATGAATGTC+TGG | - | tig0004173:8121-8140 | Msa1340510:intron | 25.0% |
| ! | AAATCAGACAAAAGAAATTC+AGG | - | tig0004173:8382-8401 | Msa1340510:intron | 25.0% |
| ! | AATCAGACAAAAGAAATTCA+GGG | - | tig0004173:8383-8402 | Msa1340510:intron | 25.0% |
| ! | AAATTCATTAGGTCAGATAA+TGG | + | tig0004173:8409-8428 | Msa1340510:intergenic | 25.0% |
| ! | TTATCTGACCTAATGAATTT+AGG | - | tig0004173:8409-8428 | Msa1340510:intron | 25.0% |
| ! | ATATCACTCCTAAATTCATT+AGG | + | tig0004173:8420-8439 | Msa1340510:intergenic | 25.0% |
| ! | TGATTTCAGTAGATTCTTAT+GGG | + | tig0004173:8518-8537 | Msa1340510:intergenic | 25.0% |
| ! | ATGATTTCAGTAGATTCTTA+TGG | + | tig0004173:8519-8538 | Msa1340510:intergenic | 25.0% |
| !!! | TACTTCATTTTGATATTTGG+GGG | + | tig0004173:8594-8613 | Msa1340510:intergenic | 25.0% |
| ! | ATAGAATGACTTGAGTTATA+AGG | - | tig0004173:8634-8653 | Msa1340510:intron | 25.0% |
| !! | ATAAGGCAATTTTCTTTGTT+TGG | - | tig0004173:8651-8670 | Msa1340510:intron | 25.0% |
| ! | AAACAGAATTACAAGTAGTT+TGG | - | tig0004173:8824-8843 | Msa1340510:intron | 25.0% |
| ! | AACAGAATTACAAGTAGTTT+GGG | - | tig0004173:8825-8844 | Msa1340510:intron | 25.0% |
| ! | AGTAGTTTGGGAAAATTTAT+TGG | - | tig0004173:8837-8856 | Msa1340510:intron | 25.0% |
| !! | AGGTAAGAAATTAACTTGAT+AGG | - | tig0004173:8996-9015 | Msa1340510:intron | 25.0% |
| ! | TACATGTTCAATCCAATTAT+TGG | + | tig0004173:9248-9267 | Msa1340510:intergenic | 25.0% |
| ! | ATAATTGGATTGAACATGTA+AGG | - | tig0004173:9248-9267 | Msa1340510:intron | 25.0% |
| !!! | AGCATGAGTTTTATTGTTAT+TGG | - | tig0004173:9503-9522 | Msa1340510:intron | 25.0% |
| !!! | GCATGAGTTTTATTGTTATT+GGG | - | tig0004173:9504-9523 | Msa1340510:intron | 25.0% |
| ! | AATAAACAAGGTTTATTCCA+TGG | + | tig0004173:9745-9764 | Msa1340510:intergenic | 25.0% |
| !! | GAATAAACCTTGTTTATTGA+AGG | - | tig0004173:9747-9766 | Msa1340510:intron | 25.0% |
| ! | TCTCTACTACATTCTTAATA+TGG | + | tig0004173:5760-5779 | Msa1340510:intergenic | 25.0% |
| !!! | ATTCATTAACTTGTGAATGA+AGG | - | tig0004173:5791-5810 | Msa1340510:intron | 25.0% |
| ! | GACACAAATGTAAATATAGA+TGG | + | tig0004173:11085-11104 | Msa1340510:intergenic | 25.0% |
| ! | TCATTTGAACTAATGGTATT+TGG | - | tig0004173:11215-11234 | Msa1340510:intron | 25.0% |
| !! | CTAATGGTATTTGGAATATT+AGG | - | tig0004173:11224-11243 | Msa1340510:intron | 25.0% |
| !! | ACTTTTTACACAGATTCTAA+TGG | - | tig0004173:11324-11343 | Msa1340510:intron | 25.0% |
| !! | CTTTTTACACAGATTCTAAT+GGG | - | tig0004173:11325-11344 | Msa1340510:intron | 25.0% |
| !!! | TTCCTTATTTTTTCCTTTCT+TGG | - | tig0004173:11708-11727 | Msa1340510:CDS | 25.0% |
| ! | AAATTATATCGTGAACCTAA+AGG | + | tig0004173:11870-11889 | Msa1340510:intergenic | 25.0% |
| ! | TGAAGAATAAAATATACCTG+TGG | + | tig0004173:12015-12034 | Msa1340510:intergenic | 25.0% |
| !! | GGTATATTTTATTCTTCATG+CGG | - | tig0004173:12017-12036 | Msa1340510:intron | 25.0% |
| !!! | TGTCTTGTTTCTTAAAAATG+TGG | - | tig0004173:12119-12138 | Msa1340510:CDS | 25.0% |
| ! | ATACCAATGATTTAATAGCA+CGG | + | tig0004173:12239-12258 | Msa1340510:intergenic | 25.0% |
| ! | ATTGGTTATAAATTGTTGCT+TGG | - | tig0004173:12546-12565 | Msa1340510:intron | 25.0% |
| ! | CTTCATAATTACTATCCAAT+TGG | - | tig0004173:12573-12592 | Msa1340510:intron | 25.0% |
| !!! | TTTGTCATTTCTAGTGTATT+TGG | - | tig0004173:12846-12865 | Msa1340510:intron | 25.0% |
| ! | TTATTATAGAATAGACCCTT+TGG | - | tig0004173:12992-13011 | Msa1340510:CDS | 25.0% |
| ! | TATTATAGAATAGACCCTTT+GGG | - | tig0004173:12993-13012 | Msa1340510:CDS | 25.0% |
| !! | AAAGATCAACTTTATTTGGT+AGG | - | tig0004173:13158-13177 | Msa1340510:CDS | 25.0% |
| ! | AATAACACTATAGGACATAA+TGG | + | tig0004173:13320-13339 | Msa1340510:intergenic | 25.0% |
| ! | TACTGAACTAATAACACTAT+AGG | + | tig0004173:13329-13348 | Msa1340510:intergenic | 25.0% |
| !! | AGCTTGTAACTATATTTTCT+TGG | - | tig0004173:13484-13503 | Msa1340510:intron | 25.0% |
| !! | TATTTTCGGATTTAGAAATG+GGG | + | tig0004173:13891-13910 | Msa1340510:intergenic | 25.0% |
| !! | CATATTTTCGGATTTAGAAA+TGG | + | tig0004173:13893-13912 | Msa1340510:intergenic | 25.0% |
| ! | CATTTCTAAATCCGAAAATA+TGG | - | tig0004173:13891-13910 | Msa1340510:CDS | 25.0% |
| !!! | AAAATTTGGGACCATATTTT+CGG | + | tig0004173:13905-13924 | Msa1340510:intergenic | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | + | tig0004173:14195-14214 | Msa1340510:intergenic | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | - | tig0004173:14195-14214 | Msa1340510:intron | 25.0% |
| ! | GAACAAGACTTAAAAAAGTT+TGG | + | tig0004173:14385-14404 | Msa1340510:intergenic | 25.0% |
| ! | GTTACTACTATCAAAGTAAA+TGG | + | tig0004173:14627-14646 | Msa1340510:intergenic | 25.0% |
| ! | GCAAAATATCCAAGAATTAA+AGG | + | tig0004173:14758-14777 | Msa1340510:intergenic | 25.0% |
| !!! | AAATGTTTTTTTTAACCCTC+CGG | - | tig0004173:14817-14836 | Msa1340510:five_prime_UTR | 25.0% |
| ! | TTTTATCAGACACTTTGTGA+TGG | + | tig0004173:327-346 | Msa1115500:intergenic | 30.0% |
| !!! | ATCAATTTTTTCTCCATTGG+GGG | + | tig0004173:551-570 | Msa1340510:intergenic | 30.0% |
| !!! | GATCAATTTTTTCTCCATTG+GGG | + | tig0004173:552-571 | Msa1340510:intergenic | 30.0% |
| CATAAAAGAGAATTCCCAAA+AGG | + | tig0004173:586-605 | Msa1340510:intergenic | 30.0% | |
| !! | CTTTTGGGAATTCTCTTTTA+TGG | - | tig0004173:584-603 | Msa1340510:three_prime_UTR | 30.0% |
| ! | GGTGTTATACTCTATAAACT+TGG | + | tig0004173:618-637 | Msa1340510:intergenic | 30.0% |
| AATGACCTGAATAGAATTGT+TGG | + | tig0004173:741-760 | Msa1340510:intergenic | 30.0% | |
| ! | TTAATTTTGCAATGTGTAGG+GGG | - | tig0004173:823-842 | Msa1340510:CDS | 30.0% |
| GAACAGGAAATTTATCTATG+TGG | - | tig0004173:898-917 | Msa1340510:intron | 30.0% | |
| GCTCTATTGACCATATTTAT+TGG | - | tig0004173:961-980 | Msa1340510:intron | 30.0% | |
| ATGGAAAGCAAATTGAATCT+TGG | + | tig0004173:1073-1092 | Msa1340510:intergenic | 30.0% | |
| ! | TTGATTTGATCCCAAAATTC+AGG | - | tig0004173:1156-1175 | Msa1340510:intron | 30.0% |
| TGATTTGATCCCAAAATTCA+GGG | - | tig0004173:1157-1176 | Msa1340510:intron | 30.0% | |
| ! | TATACAGATCCCTGAATTTT+GGG | + | tig0004173:1169-1188 | Msa1340510:intergenic | 30.0% |
| GTACTTGAGAAATATACACA+TGG | + | tig0004173:1258-1277 | Msa1340510:intergenic | 30.0% | |
| TCACATGTAAAATGGACATA+TGG | + | tig0004173:1333-1352 | Msa1340510:intergenic | 30.0% | |
| GTAATACCCAAATATTAGAC+AGG | + | tig0004173:1535-1554 | Msa1340510:intergenic | 30.0% | |
| ! | ATTTTTCCATGTCACAGAAA+CGG | - | tig0004173:1572-1591 | Msa1340510:intron | 30.0% |
| ATGTTAAGCACAAGATTCTA+TGG | + | tig0004173:1786-1805 | Msa1340510:intergenic | 30.0% | |
| !! | TTGATTCACTTTTCTTTGGT+AGG | - | tig0004173:1851-1870 | Msa1340510:intron | 30.0% |
| ! | TTTTGCGTTTATTCCTATCT+TGG | + | tig0004173:1885-1904 | Msa1340510:intergenic | 30.0% |
| AGATAGGAATAAACGCAAAA+AGG | - | tig0004173:1885-1904 | Msa1340510:intron | 30.0% | |
| CCAATCATGGTGAAAAAATA+AGG | + | tig0004173:2018-2037 | Msa1340510:intergenic | 30.0% | |
| !!! | CCTTATTTTTTCACCATGAT+TGG | - | tig0004173:2015-2034 | Msa1340510:CDS | 30.0% |
| ACTTCAAAGTAAAATCCAGA+AGG | + | tig0004173:2144-2163 | Msa1340510:intergenic | 30.0% | |
| !!! | TCAAGGTGTTTTGAGATAAT+TGG | - | tig0004173:2406-2425 | Msa1340510:intron | 30.0% |
| ATAATAAATCCGTTCATGTC+TGG | - | tig0004173:2459-2478 | Msa1340510:intron | 30.0% | |
| CGCATTAAAAGAAGATCTAA+GGG | + | tig0004173:2646-2665 | Msa1340510:intergenic | 30.0% | |
| ACGCATTAAAAGAAGATCTA+AGG | + | tig0004173:2647-2666 | Msa1340510:intergenic | 30.0% | |
| ! | CTATTTAAGTTTGAAGTGGT+AGG | - | tig0004173:2772-2791 | Msa1340510:intron | 30.0% |
| !! | ATTTTCAGGCAAACATAACT+CGG | - | tig0004173:2847-2866 | Msa1340510:CDS | 30.0% |
| AAATCACATTATGTGGACAA+TGG | - | tig0004173:2872-2891 | Msa1340510:CDS | 30.0% | |
| AATCACATTATGTGGACAAT+GGG | - | tig0004173:2873-2892 | Msa1340510:CDS | 30.0% | |
| TTTGCATCTGTATATATGGA+GGG | + | tig0004173:3121-3140 | Msa1340510:intergenic | 30.0% | |
| ! | TTTTGCATCTGTATATATGG+AGG | + | tig0004173:3122-3141 | Msa1340510:intergenic | 30.0% |
| ! | GGTTTTTCATGCAAATAAGA+AGG | + | tig0004173:3266-3285 | Msa1340510:intergenic | 30.0% |
| ATAAGGTAATTGAAGTCTTC+AGG | - | tig0004173:3415-3434 | Msa1340510:intron | 30.0% | |
| !! | AATTGAAGTCTTCAGGTTTT+TGG | - | tig0004173:3422-3441 | Msa1340510:intron | 30.0% |
| CTTGTTGAAACTTTGTAACT+GGG | + | tig0004173:3796-3815 | Msa1340510:intergenic | 30.0% | |
| ! | ACTTGTTGAAACTTTGTAAC+TGG | + | tig0004173:3797-3816 | Msa1340510:intergenic | 30.0% |
| ACTTGAAAGTGAAAACTGTT+TGG | - | tig0004173:3861-3880 | Msa1340510:intron | 30.0% | |
| CTTGAAAGTGAAAACTGTTT+GGG | - | tig0004173:3862-3881 | Msa1340510:intron | 30.0% | |
| AAAATGAAAAAGCAAAGAGG+GGG | + | tig0004173:3989-4008 | Msa1340510:intergenic | 30.0% | |
| GAAAATGAAAAAGCAAAGAG+GGG | + | tig0004173:3990-4009 | Msa1340510:intergenic | 30.0% | |
| ! | TTTCCATATTCAGGTTATTG+TGG | - | tig0004173:4179-4198 | Msa1340510:intron | 30.0% |
| AAACCACAATAACCTGAATA+TGG | + | tig0004173:4185-4204 | Msa1340510:intergenic | 30.0% | |
| ATTGTGGTTTATAACTCTCT+TGG | - | tig0004173:4195-4214 | Msa1340510:intron | 30.0% | |
| TGTAACACAATATTGAAGAC+AGG | + | tig0004173:4394-4413 | Msa1340510:intergenic | 30.0% | |
| TGTCTTCAATATTGTGTTAC+AGG | - | tig0004173:4393-4412 | Msa1340510:intron | 30.0% | |
| ATATTGTGTTACAGGATGTT+TGG | - | tig0004173:4401-4420 | Msa1340510:intron | 30.0% | |
| !! | TTGTAGGTTTAAGTTGAATC+TGG | - | tig0004173:4532-4551 | Msa1340510:intron | 30.0% |
| AAACATTTGCAGGTTATTGA+TGG | - | tig0004173:4728-4747 | Msa1340510:intron | 30.0% | |
| !!! | AGATTCTATTTTTACACCGT+TGG | + | tig0004173:4774-4793 | Msa1340510:intergenic | 30.0% |
| CTATTATGTCAAGGCATATT+TGG | - | tig0004173:4835-4854 | Msa1340510:intron | 30.0% | |
| GCAGATAACGAATTATTTGA+GGG | + | tig0004173:4988-5007 | Msa1340510:intergenic | 30.0% | |
| AGCAGATAACGAATTATTTG+AGG | + | tig0004173:4989-5008 | Msa1340510:intergenic | 30.0% | |
| CAATGTTCATGTTATGAACA+AGG | + | tig0004173:5014-5033 | Msa1340510:intergenic | 30.0% | |
| !! | AATGTTTTCTGCTTGTTTTC+AGG | - | tig0004173:5039-5058 | Msa1340510:intron | 30.0% |
| AAGTGTATAAACTGATGATC+TGG | + | tig0004173:5070-5089 | Msa1340510:intergenic | 30.0% | |
| GTGATGCAAAGTAACTAAAA+TGG | + | tig0004173:5224-5243 | Msa1340510:intergenic | 30.0% | |
| !!! | ATTTTTTCCTCTTACACTGT+TGG | - | tig0004173:5292-5311 | Msa1340510:intron | 30.0% |
| ! | TTTTTATCCAACAGTGTAAG+AGG | + | tig0004173:5302-5321 | Msa1340510:intergenic | 30.0% |
| !! | TAACACTCTTACTTTTGACT+TGG | - | tig0004173:5335-5354 | Msa1340510:intron | 30.0% |
| CTGAATTACCTTTACTATTC+AGG | - | tig0004173:5379-5398 | Msa1340510:intron | 30.0% | |
| CTTTACTATTCAGGGTATAA+CGG | - | tig0004173:5388-5407 | Msa1340510:intron | 30.0% | |
| ! | TATCTTTGTTTCGACATTTC+AGG | - | tig0004173:5462-5481 | Msa1340510:intron | 30.0% |
| TAATTTCTGTAACAGAATGC+TGG | - | tig0004173:5512-5531 | Msa1340510:intron | 30.0% | |
| CTTATAAGATGTGTTCCATT+TGG | + | tig0004173:5554-5573 | Msa1340510:intergenic | 30.0% | |
| TCTTATAAGTCATGAAAGAC+AGG | - | tig0004173:5565-5584 | Msa1340510:intron | 30.0% | |
| TGATGCATTTCATCTAGTAT+TGG | + | tig0004173:5696-5715 | Msa1340510:intergenic | 30.0% | |
| AATCAATCCATGGATATATC+AGG | - | tig0004173:5719-5738 | Msa1340510:intron | 30.0% | |
| ! | TATTTCTGCTTATAGGAGAT+TGG | + | tig0004173:6655-6674 | Msa1340510:intergenic | 30.0% |
| GCAGAAATATCATTGTAAAG+AGG | - | tig0004173:6666-6685 | Msa1340510:intron | 30.0% | |
| AGCATCATTATGTAACTTGA+TGG | - | tig0004173:6692-6711 | Msa1340510:intron | 30.0% | |
| TCATTATGTAACTTGATGGA+AGG | - | tig0004173:6696-6715 | Msa1340510:intron | 30.0% | |
| ! | GTGTCAAAGAAAATTTTGTC+TGG | + | tig0004173:6778-6797 | Msa1340510:intergenic | 30.0% |
| GCTTTCAAAATTAAGGATCT+TGG | + | tig0004173:6858-6877 | Msa1340510:intergenic | 30.0% | |
| AGAAACTTTCTTAGTGAACA+AGG | - | tig0004173:6974-6993 | Msa1340510:intron | 30.0% | |
| AAGCTTTCAAAATCCCTTTA+TGG | + | tig0004173:7086-7105 | Msa1340510:intergenic | 30.0% | |
| TGAAAGCTTACAAACTTGAT+TGG | - | tig0004173:7097-7116 | Msa1340510:intron | 30.0% | |
| GAAAGCTTACAAACTTGATT+GGG | - | tig0004173:7098-7117 | Msa1340510:intron | 30.0% | |
| AAAGTGAAACATAATGCTGA+TGG | + | tig0004173:7362-7381 | Msa1340510:intergenic | 30.0% | |
| TTTCCAACAGTCATATTTGA+TGG | - | tig0004173:7484-7503 | Msa1340510:intron | 30.0% | |
| AACAAGAGACATAGCAAATA+TGG | - | tig0004173:7538-7557 | Msa1340510:intron | 30.0% | |
| ATATAGTCATGTAAGTATGC+AGG | - | tig0004173:7656-7675 | Msa1340510:intron | 30.0% | |
| !! | AGGAGTAATCTTATTTCTAG+TGG | - | tig0004173:7676-7695 | Msa1340510:intron | 30.0% |
| ! | TTTCTAGTGGAAATTCTAAG+GGG | - | tig0004173:7689-7708 | Msa1340510:intron | 30.0% |
| AGATGAAATGTAGGGTAAAA+TGG | - | tig0004173:7928-7947 | Msa1340510:intron | 30.0% | |
| !! | CCAGAGAAATTTTTGTTTCA+AGG | + | tig0004173:7973-7992 | Msa1340510:intergenic | 30.0% |
| CCTTGAAACAAAAATTTCTC+TGG | - | tig0004173:7970-7989 | Msa1340510:intron | 30.0% | |
| TCATTATAAGTCTCCTTATC+AGG | + | tig0004173:8164-8183 | Msa1340510:intergenic | 30.0% | |
| AGGAGACTTATAATGAAGAA+TGG | - | tig0004173:8168-8187 | Msa1340510:intron | 30.0% | |
| GGAGACTTATAATGAAGAAT+GGG | - | tig0004173:8169-8188 | Msa1340510:intron | 30.0% | |
| GCATAACTCCAGAAAATATT+AGG | - | tig0004173:8232-8251 | Msa1340510:intron | 30.0% | |
| ! | CCAAACTTCCTAATATTTTC+TGG | + | tig0004173:8243-8262 | Msa1340510:intergenic | 30.0% |
| CCAGAAAATATTAGGAAGTT+TGG | - | tig0004173:8240-8259 | Msa1340510:intron | 30.0% | |
| ACATTTGTCTAATCAAAGGT+TGG | + | tig0004173:8746-8765 | Msa1340510:intergenic | 30.0% | |
| TAGGACATTTGTCTAATCAA+AGG | + | tig0004173:8750-8769 | Msa1340510:intergenic | 30.0% | |
| ACCATAATTGTTCATTATGC+TGG | + | tig0004173:9123-9142 | Msa1340510:intergenic | 30.0% | |
| !! | AATTATTGGCTCATTGATTC+TGG | + | tig0004173:9234-9253 | Msa1340510:intergenic | 30.0% |
| AGAATCAATGAGCCAATAAT+TGG | - | tig0004173:9233-9252 | Msa1340510:intron | 30.0% | |
| ! | TTAACTGATTCTCAATCAGT+TGG | + | tig0004173:9456-9475 | Msa1340510:intergenic | 30.0% |
| TCATCTCTGTGAAATAATCA+AGG | - | tig0004173:9958-9977 | Msa1340510:intron | 30.0% | |
| GAAATAATCAAGGACAGATT+TGG | - | tig0004173:9968-9987 | Msa1340510:intron | 30.0% | |
| ACCTTGCTTCAAATTGTTAA+TGG | - | tig0004173:9992-10011 | Msa1340510:intron | 30.0% | |
| GTAATCATCTCATACATTCT+TGG | + | tig0004173:10148-10167 | Msa1340510:intergenic | 30.0% | |
| CTACGATTCAAATCATCAAA+AGG | - | tig0004173:10182-10201 | Msa1340510:CDS | 30.0% | |
| AAATCATCAAAAGGAGGAAT+AGG | - | tig0004173:10191-10210 | Msa1340510:CDS | 30.0% | |
| TGCAAAAGAAATGCAGAAAA+AGG | - | tig0004173:10411-10430 | Msa1340510:CDS | 30.0% | |
| CGAAAATCAAAGAAAAGAAG+AGG | - | tig0004173:10580-10599 | Msa1340510:intron | 30.0% | |
| TGCTGAATCATTTGAACTAA+TGG | - | tig0004173:11208-11227 | Msa1340510:intron | 30.0% | |
| ! | TGGTATTTGGAATATTAGGT+TGG | - | tig0004173:11228-11247 | Msa1340510:intron | 30.0% |
| TAATGAAATGCAGTATTGCA+AGG | + | tig0004173:11390-11409 | Msa1340510:intergenic | 30.0% | |
| !! | ATTCATTTTTCTCTGCTCTA+GGG | - | tig0004173:11524-11543 | Msa1340510:CDS | 30.0% |
| CTCCAAGAAAGGAAAAAATA+AGG | + | tig0004173:11713-11732 | Msa1340510:intergenic | 30.0% | |
| !!! | CTTATTTTTTCCTTTCTTGG+AGG | - | tig0004173:11711-11730 | Msa1340510:CDS | 30.0% |
| TGCAGTTATATCAATCCTTT+AGG | - | tig0004173:11852-11871 | Msa1340510:intron | 30.0% | |
| TTGTCCTTTCAGATTAATCT+TGG | - | tig0004173:11893-11912 | Msa1340510:intron | 30.0% | |
| TGTCCTTTCAGATTAATCTT+GGG | - | tig0004173:11894-11913 | Msa1340510:intron | 30.0% | |
| TATCCCAAGATTAATCTGAA+AGG | + | tig0004173:11900-11919 | Msa1340510:intergenic | 30.0% | |
| ! | TAAGACAGAATTCTCAGTTT+TGG | - | tig0004173:11934-11953 | Msa1340510:CDS | 30.0% |
| CTCTAAATAGATTGCTAATC+AGG | - | tig0004173:12042-12061 | Msa1340510:intron | 30.0% | |
| GTTAACCATATATGCCAAAA+GGG | + | tig0004173:12145-12164 | Msa1340510:intergenic | 30.0% | |
| TGTTAACCATATATGCCAAA+AGG | + | tig0004173:12146-12165 | Msa1340510:intergenic | 30.0% | |
| ! | CGAATTTTCTTTTCACCAAT+AGG | - | tig0004173:12366-12385 | Msa1340510:CDS | 30.0% |
| ! | ATTTTCTTTTCACCAATAGG+AGG | - | tig0004173:12369-12388 | Msa1340510:CDS | 30.0% |
| GCAATGTCATGTGTATATAT+TGG | - | tig0004173:12528-12547 | Msa1340510:intron | 30.0% | |
| ! | ATCATGTCAATCCATTTTAG+TGG | - | tig0004173:12630-12649 | Msa1340510:intron | 30.0% |
| ! | ACCAATTTTCAATTACACTG+TGG | - | tig0004173:12746-12765 | Msa1340510:intron | 30.0% |
| !! | TCATTTCTAGTGTATTTGGT+TGG | - | tig0004173:12850-12869 | Msa1340510:intron | 30.0% |
| !!! | GCTTTTTCTACTTATTTTGC+AGG | - | tig0004173:12956-12975 | Msa1340510:CDS | 30.0% |
| AAAGTGGAGAATATATTTCC+TGG | + | tig0004173:13049-13068 | Msa1340510:intergenic | 30.0% | |
| ! | ATGCATGTAATTCACCTTTT+CGG | + | tig0004173:13084-13103 | Msa1340510:intergenic | 30.0% |
| TCCTGAAAATGTTGTTACAT+GGG | + | tig0004173:13208-13227 | Msa1340510:intergenic | 30.0% | |
| ATCCTGAAAATGTTGTTACA+TGG | + | tig0004173:13209-13228 | Msa1340510:intergenic | 30.0% | |
| GAAAGCCAATATTTAAGCAA+GGG | + | tig0004173:13298-13317 | Msa1340510:intergenic | 30.0% | |
| TTAAGCTGTCCATGTTATAA+TGG | + | tig0004173:13391-13410 | Msa1340510:intergenic | 30.0% | |
| ! | TATATTTTCTTGGTCCTTTC+AGG | - | tig0004173:13494-13513 | Msa1340510:intron | 30.0% |
| GATCTGTGCATAAATTTGAT+TGG | + | tig0004173:13709-13728 | Msa1340510:intergenic | 30.0% | |
| ! | ATTTTCGGATTTAGAAATGG+GGG | + | tig0004173:13890-13909 | Msa1340510:intergenic | 30.0% |
| !! | GTATAAATAAGCGTCGAATT+CGG | - | tig0004173:14245-14264 | Msa1340510:intron | 30.0% |
| ATTGTGAGTCAATGACAATA+TGG | - | tig0004173:14340-14359 | Msa1340510:intron | 30.0% | |
| ACTTCTTTGATCTAATACCA+AGG | + | tig0004173:14437-14456 | Msa1340510:intergenic | 30.0% | |
| GTATTAGATCAAAGAAGTGA+AGG | - | tig0004173:14439-14458 | Msa1340510:intron | 30.0% | |
| CAAAGTAAATGGTAAAAGTG+CGG | + | tig0004173:14616-14635 | Msa1340510:intergenic | 30.0% | |
| ! | ACAACAAAGCATCAAAAAGA+TGG | + | tig0004173:14649-14668 | Msa1340510:intergenic | 30.0% |
| ! | ATAAGCTTGTTTAAAAGGCA+AGG | + | tig0004173:14699-14718 | Msa1340510:intergenic | 30.0% |
| !! | TTTTGGAGGAGTTAAAGATA+TGG | + | tig0004173:14787-14806 | Msa1340510:intergenic | 30.0% |
| ! | AACATTTATGGAAGCTGTTT+TGG | + | tig0004173:14804-14823 | Msa1340510:intergenic | 30.0% |
| CTGAATAAGTGAGTAATTTG+AGG | - | tig0004173:14896-14915 | Msa1340510:intron | 30.0% | |
| TAAAGACATTACGACATGTA+AGG | + | tig0004173:14934-14953 | Msa1340510:intergenic | 30.0% | |
| TTTATCAATTGAGATGTCCA+TGG | - | tig0004173:14950-14969 | Msa1340510:five_prime_UTR | 30.0% | |
| TTATCAATTGAGATGTCCAT+GGG | - | tig0004173:14951-14970 | Msa1340510:five_prime_UTR | 30.0% | |
| ATCCAATGGTACAGAGATAA+AGG | + | tig0004173:353-372 | Msa1340510:intergenic | 35.0% | |
| GATACACATGGAAGTGATTA+TGG | - | tig0004173:370-389 | Msa1340510:three_prime_UTR | 35.0% | |
| !! | ATCTTTTTGGTGACCCTTTT+GGG | - | tig0004173:569-588 | Msa1340510:three_prime_UTR | 35.0% |
| ! | TTGGGAATTCTCTTTTATGG+AGG | - | tig0004173:587-606 | Msa1340510:three_prime_UTR | 35.0% |
| TATAGAGTATAACACCTCAC+AGG | - | tig0004173:622-641 | Msa1340510:CDS | 35.0% | |
| ATAGAGTATAACACCTCACA+GGG | - | tig0004173:623-642 | Msa1340510:CDS | 35.0% | |
| ! | ATACTCATGATGATGTTGGA+TGG | - | tig0004173:684-703 | Msa1340510:CDS | 35.0% |
| ACTGTTGATCAGTACTATGT+TGG | - | tig0004173:713-732 | Msa1340510:CDS | 35.0% | |
| TGGTTCCAACAATTCTATTC+AGG | - | tig0004173:733-752 | Msa1340510:CDS | 35.0% | |
| GCAAAATGTGTTGGATTCTA+TGG | - | tig0004173:853-872 | Msa1340510:intron | 35.0% | |
| TTCTATGGTTCATGCTCTAT+TGG | - | tig0004173:868-887 | Msa1340510:intron | 35.0% | |
| ! | GTATACAGATCCCTGAATTT+TGG | + | tig0004173:1170-1189 | Msa1340510:intergenic | 35.0% |
| ! | TTTGCATTCTTTTGTGCTAC+TGG | - | tig0004173:1285-1304 | Msa1340510:intron | 35.0% |
| CATTGGGTTCACATGTAAAA+TGG | + | tig0004173:1341-1360 | Msa1340510:intergenic | 35.0% | |
| !! | AGTTAAGCAGCTTGTTAGTT+CGG | - | tig0004173:1414-1433 | Msa1340510:intron | 35.0% |
| TATAACCCTCACAAACATGA+AGG | + | tig0004173:1505-1524 | Msa1340510:intergenic | 35.0% | |
| ATGATTGATCAGACTACACT+TGG | - | tig0004173:1638-1657 | Msa1340510:intron | 35.0% | |
| ! | TTCGATTTGACTCCAAGAAT+TGG | - | tig0004173:1683-1702 | Msa1340510:intron | 35.0% |
| ATTTGACTCCAAGAATTGGT+TGG | - | tig0004173:1687-1706 | Msa1340510:intron | 35.0% | |
| TCAATTTGCCAACCAATTCT+TGG | + | tig0004173:1698-1717 | Msa1340510:intergenic | 35.0% | |
| !! | GGCTTTGATTCACTTTTCTT+TGG | - | tig0004173:1847-1866 | Msa1340510:intron | 35.0% |
| AGTTTAAGAGACACCAATCA+TGG | + | tig0004173:2031-2050 | Msa1340510:intergenic | 35.0% | |
| AAAGATCTGGAAGAACACAT+CGG | + | tig0004173:2091-2110 | Msa1340510:intergenic | 35.0% | |
| TCAAAGTAAAATCCAGAAGG+AGG | + | tig0004173:2141-2160 | Msa1340510:intergenic | 35.0% | |
| ATTCATGTTATCCTTCAAGC+AGG | + | tig0004173:2269-2288 | Msa1340510:intergenic | 35.0% | |
| !! | GATTTTTGGATACAAGGTCA+AGG | - | tig0004173:2389-2408 | Msa1340510:intron | 35.0% |
| TTGGAATGAATGAGAGTAAG+AGG | - | tig0004173:2425-2444 | Msa1340510:intron | 35.0% | |
| TGGAATGAATGAGAGTAAGA+GGG | - | tig0004173:2426-2445 | Msa1340510:intron | 35.0% | |
| AGTGTGCAATGTATATCACT+AGG | + | tig0004173:2542-2561 | Msa1340510:intergenic | 35.0% | |
| ATATACATTGCACACTGCAT+AGG | - | tig0004173:2546-2565 | Msa1340510:intron | 35.0% | |
| ! | CTAGAATCATAGTGTTGTTG+AGG | + | tig0004173:2722-2741 | Msa1340510:intergenic | 35.0% |
| ! | ACAACACTATGATTCTAGCT+TGG | - | tig0004173:2724-2743 | Msa1340510:intron | 35.0% |
| AGTATCAATACGCACATACA+TGG | - | tig0004173:2907-2926 | Msa1340510:CDS | 35.0% | |
| AACTTAGAACCCTAGTCAAA+GGG | + | tig0004173:2980-2999 | Msa1340510:intergenic | 35.0% | |
| !!! | TGTGCTTTGACTTGTGATTT+TGG | - | tig0004173:3051-3070 | Msa1340510:intron | 35.0% |
| ! | GATTTTGGATGCACAACTTT+AGG | - | tig0004173:3066-3085 | Msa1340510:intron | 35.0% |
| AATATGCTGCAAATGAGTCA+TGG | - | tig0004173:3140-3159 | Msa1340510:intron | 35.0% | |
| AAGAAATCGTCAGTCTTGAT+TGG | + | tig0004173:3166-3185 | Msa1340510:intergenic | 35.0% | |
| AAGAAGGAAAACGTCATACA+GGG | + | tig0004173:3250-3269 | Msa1340510:intergenic | 35.0% | |
| TAAGAAGGAAAACGTCATAC+AGG | + | tig0004173:3251-3270 | Msa1340510:intergenic | 35.0% | |
| TTTGCACGATCTGAATAACT+GGG | + | tig0004173:3287-3306 | Msa1340510:intergenic | 35.0% | |
| ATTTGCACGATCTGAATAAC+TGG | + | tig0004173:3288-3307 | Msa1340510:intergenic | 35.0% | |
| AGTTATTCAGATCGTGCAAA+TGG | - | tig0004173:3287-3306 | Msa1340510:CDS | 35.0% | |
| CTTGCAGCCTGATAATTTAT+CGG | + | tig0004173:3462-3481 | Msa1340510:intergenic | 35.0% | |
| TCAGCTAATGAGTCTGTATT+TGG | + | tig0004173:3522-3541 | Msa1340510:intergenic | 35.0% | |
| TATGCTAAACGATTGGCAAT+AGG | - | tig0004173:3609-3628 | Msa1340510:intron | 35.0% | |
| TTGCTTGGTTGAATCAACAT+CGG | - | tig0004173:3754-3773 | Msa1340510:intron | 35.0% | |
| CATAAGCTCTTTCCATATTC+AGG | - | tig0004173:4170-4189 | Msa1340510:intron | 35.0% | |
| TGGTTTATAACTCTCTTGGT+TGG | - | tig0004173:4199-4218 | Msa1340510:intron | 35.0% | |
| AGAATCTCAAATTCTACCTC+TGG | - | tig0004173:4787-4806 | Msa1340510:intron | 35.0% | |
| GAAAATGCAAGCCAATACTT+GGG | + | tig0004173:4881-4900 | Msa1340510:intergenic | 35.0% | |
| TGAAAATGCAAGCCAATACT+TGG | + | tig0004173:4882-4901 | Msa1340510:intergenic | 35.0% | |
| TAAGTGCTAAAACCAAATGG+TGG | + | tig0004173:4914-4933 | Msa1340510:intergenic | 35.0% | |
| GTGTAAGTGCTAAAACCAAA+TGG | + | tig0004173:4917-4936 | Msa1340510:intergenic | 35.0% | |
| TGTATAAACTGATGATCTGG+TGG | + | tig0004173:5067-5086 | Msa1340510:intergenic | 35.0% | |
| AGTCATGAAAAGTCTTCCAT+AGG | - | tig0004173:5093-5112 | Msa1340510:intron | 35.0% | |
| CTTCAAATTTCCTTGACCTA+TGG | + | tig0004173:5112-5131 | Msa1340510:intergenic | 35.0% | |
| GAAATTACAAACATGCTGAG+AGG | + | tig0004173:5268-5287 | Msa1340510:intergenic | 35.0% | |
| !!! | ACTCTTACTTTTGACTTGGA+AGG | - | tig0004173:5339-5358 | Msa1340510:intron | 35.0% |
| CGTTATACCCTGAATAGTAA+AGG | + | tig0004173:5390-5409 | Msa1340510:intergenic | 35.0% | |
| AACTGATCAAAAAGATCCAC+AGG | - | tig0004173:5411-5430 | Msa1340510:intron | 35.0% | |
| TAAGATGTGTTCCATTTGGA+CGG | + | tig0004173:5550-5569 | Msa1340510:intergenic | 35.0% | |
| !! | TTTCATCTAGTATTGGTCCA+TGG | + | tig0004173:5689-5708 | Msa1340510:intergenic | 35.0% |
| CAAAACACCTGATATATCCA+TGG | + | tig0004173:5729-5748 | Msa1340510:intergenic | 35.0% | |
| ATGTAGTACAATAGCTTAGC+TGG | + | tig0004173:5870-5889 | Msa1340510:intergenic | 35.0% | |
| ! | AACCTTTTACTTTCCAAGCT+GGG | + | tig0004173:6024-6043 | Msa1340510:intergenic | 35.0% |
| ! | TAACCTTTTACTTTCCAAGC+TGG | + | tig0004173:6025-6044 | Msa1340510:intergenic | 35.0% |
| AGTAAAAGGTTAAAAGGCTG+TGG | - | tig0004173:6033-6052 | Msa1340510:intron | 35.0% | |
| GTTAAAAGGCTGTGGAAATA+AGG | - | tig0004173:6041-6060 | Msa1340510:intron | 35.0% | |
| AGTTACTACACATGATCAGT+TGG | + | tig0004173:6085-6104 | Msa1340510:intergenic | 35.0% | |
| AACTGATCATGTGTAGTAAC+TGG | - | tig0004173:6084-6103 | Msa1340510:intron | 35.0% | |
| GCAATCAATCTCAAGATGTT+TGG | - | tig0004173:6152-6171 | Msa1340510:intron | 35.0% | |
| TGGTTGTCACAATACAAAAC+AGG | - | tig0004173:6219-6238 | Msa1340510:intron | 35.0% | |
| ! | TGGGTCAATCTCTTATTTCT+TGG | + | tig0004173:6377-6396 | Msa1340510:intergenic | 35.0% |
| TCCTCAGGTTTACATATTCA+GGG | + | tig0004173:6468-6487 | Msa1340510:intergenic | 35.0% | |
| ATCCTCAGGTTTACATATTC+AGG | + | tig0004173:6469-6488 | Msa1340510:intergenic | 35.0% | |
| AATATGTAAACCTGAGGATC+TGG | - | tig0004173:6470-6489 | Msa1340510:intron | 35.0% | |
| ATATGTAAACCTGAGGATCT+GGG | - | tig0004173:6471-6490 | Msa1340510:intron | 35.0% | |
| AAATATCTTAAAGGCTCTCC+AGG | + | tig0004173:6513-6532 | Msa1340510:intergenic | 35.0% | |
| TCTCAGAGCTGCATTATAAT+GGG | - | tig0004173:6539-6558 | Msa1340510:intron | 35.0% | |
| !! | GCATTATAATGGGTTTGTGT+AGG | - | tig0004173:6549-6568 | Msa1340510:intron | 35.0% |
| ! | TTAACTGACTCAGGTTTACT+TGG | + | tig0004173:6750-6769 | Msa1340510:intergenic | 35.0% |
| ! | GTCAACAATGCTTTTCTTCA+TGG | + | tig0004173:7179-7198 | Msa1340510:intergenic | 35.0% |
| ! | AAGCATTGTTGACATCAAGT+TGG | - | tig0004173:7186-7205 | Msa1340510:intron | 35.0% |
| ! | TGTGAGATTGGTTATAGCTT+TGG | + | tig0004173:7237-7256 | Msa1340510:intergenic | 35.0% |
| CTTCATCAGTCAAACCTATA+GGG | + | tig0004173:7400-7419 | Msa1340510:intergenic | 35.0% | |
| ! | GTATTGGCAGAAGAAATATG+AGG | - | tig0004173:7623-7642 | Msa1340510:intron | 35.0% |
| AGAAGGAGAAGATGAAATGT+AGG | - | tig0004173:7919-7938 | Msa1340510:intron | 35.0% | |
| GAAGGAGAAGATGAAATGTA+GGG | - | tig0004173:7920-7939 | Msa1340510:intron | 35.0% | |
| !! | CTCTGGAATCTAGATCATAA+AGG | - | tig0004173:7987-8006 | Msa1340510:intron | 35.0% |
| !! | GGATACAAGTCAGGTTTTAA+AGG | + | tig0004173:8019-8038 | Msa1340510:intergenic | 35.0% |
| !! | GCTAGAAAGTGTGTTTTCTT+GGG | + | tig0004173:8040-8059 | Msa1340510:intergenic | 35.0% |
| !! | AGCTAGAAAGTGTGTTTTCT+TGG | + | tig0004173:8041-8060 | Msa1340510:intergenic | 35.0% |
| !! | AAAACACACTTTCTAGCTCT+AGG | - | tig0004173:8043-8062 | Msa1340510:intron | 35.0% |
| !! | TCTAGCTCTAGGTTGTAATT+TGG | - | tig0004173:8054-8073 | Msa1340510:intron | 35.0% |
| CTTATAATGAAGAATGGGAG+TGG | - | tig0004173:8174-8193 | Msa1340510:intron | 35.0% | |
| GAGTGGAGACTCTATTAATA+AGG | - | tig0004173:8191-8210 | Msa1340510:intron | 35.0% | |
| !!! | TCAACTCTAGAGTTTTGTTC+AGG | - | tig0004173:8313-8332 | Msa1340510:intron | 35.0% |
| AGCTATAGAAGTTTCAGCTT+TGG | - | tig0004173:8477-8496 | Msa1340510:intron | 35.0% | |
| AGATTGCATTAGAAGGGATA+GGG | - | tig0004173:8782-8801 | Msa1340510:intron | 35.0% | |
| GAAGAAGAAACAGAAACAGA+TGG | - | tig0004173:8871-8890 | Msa1340510:intron | 35.0% | |
| GGCTCTTTATTACAAGAATC+AGG | - | tig0004173:8892-8911 | Msa1340510:intron | 35.0% | |
| ATGAAATCTCAGAGGATGAT+TGG | + | tig0004173:8955-8974 | Msa1340510:intergenic | 35.0% | |
| TCCTGTATCACACATTTATC+AGG | - | tig0004173:8976-8995 | Msa1340510:intron | 35.0% | |
| ACCTGATAAATGTGTGATAC+AGG | + | tig0004173:8980-8999 | Msa1340510:intergenic | 35.0% | |
| ACATCAGTGATGTGAAAATG+AGG | - | tig0004173:9081-9100 | Msa1340510:intron | 35.0% | |
| GCCAGCATAATGAACAATTA+TGG | - | tig0004173:9119-9138 | Msa1340510:intron | 35.0% | |
| ! | ACAATTATGGTAGTGCCATT+AGG | - | tig0004173:9132-9151 | Msa1340510:intron | 35.0% |
| ! | ATGCTTGTTACTCTTCCTAA+TGG | + | tig0004173:9150-9169 | Msa1340510:intergenic | 35.0% |
| TTAGGAAGAGTAACAAGCAT+AGG | - | tig0004173:9150-9169 | Msa1340510:intron | 35.0% | |
| AATGACAGTGTTTATACCTG+AGG | - | tig0004173:9278-9297 | Msa1340510:intron | 35.0% | |
| AAGGAATGGAAGAAGTAATG+TGG | - | tig0004173:9307-9326 | Msa1340510:intron | 35.0% | |
| AATGGAAGAAGTAATGTGGT+TGG | - | tig0004173:9311-9330 | Msa1340510:intron | 35.0% | |
| ATTGCTTCAACAGTCATCTT+TGG | + | tig0004173:9370-9389 | Msa1340510:intergenic | 35.0% | |
| TCTAATGCTGTAACTTCTGA+AGG | + | tig0004173:9480-9499 | Msa1340510:intergenic | 35.0% | |
| ! | GATTTCTGTTACTTGAAGCA+TGG | + | tig0004173:9534-9553 | Msa1340510:intergenic | 35.0% |
| TTAATGCTTCAGATGCAAGA+AGG | + | tig0004173:9650-9669 | Msa1340510:intergenic | 35.0% | |
| ! | ACCTTGTTTATTGAAGGAAG+AGG | - | tig0004173:9753-9772 | Msa1340510:intron | 35.0% |
| TCCTCTTCCTTCAATAAACA+AGG | + | tig0004173:9757-9776 | Msa1340510:intergenic | 35.0% | |
| CAAGTGATTCAGTTTCTTAC+TGG | + | tig0004173:9828-9847 | Msa1340510:intergenic | 35.0% | |
| GATTCACATCTACAAGGAAA+AGG | - | tig0004173:9882-9901 | Msa1340510:CDS | 35.0% | |
| CACAGAGATGAAATCTCTTT+GGG | + | tig0004173:9949-9968 | Msa1340510:intergenic | 35.0% | |
| TCACAGAGATGAAATCTCTT+TGG | + | tig0004173:9950-9969 | Msa1340510:intergenic | 35.0% | |
| ! | GCCATTAACAATTTGAAGCA+AGG | + | tig0004173:9996-10015 | Msa1340510:intergenic | 35.0% |
| AAGCTCAATCCAAACATCAA+TGG | - | tig0004173:10067-10086 | Msa1340510:intron | 35.0% | |
| ATGAATACGCCATTGATGTT+TGG | + | tig0004173:10079-10098 | Msa1340510:intergenic | 35.0% | |
| TGATTTGAATCGTAGTGCAT+GGG | + | tig0004173:10177-10196 | Msa1340510:intergenic | 35.0% | |
| ATGATTTGAATCGTAGTGCA+TGG | + | tig0004173:10178-10197 | Msa1340510:intergenic | 35.0% | |
| CGATTCAAATCATCAAAAGG+AGG | - | tig0004173:10185-10204 | Msa1340510:CDS | 35.0% | |
| ATCAAAAGGAGGAATAGGAA+TGG | - | tig0004173:10196-10215 | Msa1340510:CDS | 35.0% | |
| TAGTTAGAACCGTTAAGAAG+AGG | - | tig0004173:10287-10306 | Msa1340510:intron | 35.0% | |
| !! | TCAGCTTGTTGAACTACAAT+CGG | - | tig0004173:10368-10387 | Msa1340510:CDS | 35.0% |
| ACGTGAATAACGAGAAAAGA+AGG | - | tig0004173:10496-10515 | Msa1340510:CDS | 35.0% | |
| ATGTAGTACAATAGCTTAGC+TGG | + | tig0004173:5870-5889 | Msa1340510:intergenic | 35.0% | |
| TACCAGACAGTACAAAGAAA+AGG | - | tig0004173:11017-11036 | Msa1340510:intron | 35.0% | |
| ! | TTCCTTTTCTTTGTACTGTC+TGG | + | tig0004173:11022-11041 | Msa1340510:intergenic | 35.0% |
| ACTCCATCTTCAATAGGTAT+AGG | + | tig0004173:11255-11274 | Msa1340510:intergenic | 35.0% | |
| ATACCTATTGAAGATGGAGT+TGG | - | tig0004173:11255-11274 | Msa1340510:intron | 35.0% | |
| TTACCAACTCCATCTTCAAT+AGG | + | tig0004173:11261-11280 | Msa1340510:intergenic | 35.0% | |
| TTGGTAAAGAAGTTTCCACT+CGG | - | tig0004173:11274-11293 | Msa1340510:intron | 35.0% | |
| ! | ATGGGCGTGATTTTATCAAA+AGG | - | tig0004173:11343-11362 | Msa1340510:intron | 35.0% |
| ! | TGGGCGTGATTTTATCAAAA+GGG | - | tig0004173:11344-11363 | Msa1340510:intron | 35.0% |
| GCAGAGAAAAATGAATGACT+TGG | + | tig0004173:11520-11539 | Msa1340510:intergenic | 35.0% | |
| !! | CATTCATTTTTCTCTGCTCT+AGG | - | tig0004173:11523-11542 | Msa1340510:CDS | 35.0% |
| GGGAAAACTTAAATCTGTTG+TGG | - | tig0004173:11544-11563 | Msa1340510:CDS | 35.0% | |
| TGGGTAATAATTTCCAGCAA+CGG | + | tig0004173:11629-11648 | Msa1340510:intergenic | 35.0% | |
| TCTATCAAAGCTCACTTACT+GGG | + | tig0004173:11648-11667 | Msa1340510:intergenic | 35.0% | |
| TTCTATCAAAGCTCACTTAC+TGG | + | tig0004173:11649-11668 | Msa1340510:intergenic | 35.0% | |
| CAATAACAATCCTCCAAGAA+AGG | + | tig0004173:11724-11743 | Msa1340510:intergenic | 35.0% | |
| ! | CATGCATGTCTAAAATCTGT+TGG | - | tig0004173:11754-11773 | Msa1340510:CDS | 35.0% |
| ! | TCTTAAAAATGTGGCCCTTT+TGG | - | tig0004173:12128-12147 | Msa1340510:CDS | 35.0% |
| ! | AAGCCGTGCTATTAAATCAT+TGG | - | tig0004173:12233-12252 | Msa1340510:intron | 35.0% |
| TGCATAAAAAAGGCAACTTG+AGG | - | tig0004173:12313-12332 | Msa1340510:intron | 35.0% | |
| !! | CTATCCAATTGGTCTTAACA+CGG | - | tig0004173:12584-12603 | Msa1340510:intron | 35.0% |
| TTAACACGGATAGCCAAAAA+AGG | - | tig0004173:12598-12617 | Msa1340510:intron | 35.0% | |
| AAATTATGACCTTGACGCTT+TGG | + | tig0004173:12663-12682 | Msa1340510:intergenic | 35.0% | |
| ! | AAAGCGTCAAGGTCATAATT+TGG | - | tig0004173:12662-12681 | Msa1340510:intron | 35.0% |
| GCCACAGTGTAATTGAAAAT+TGG | + | tig0004173:12750-12769 | Msa1340510:intergenic | 35.0% | |
| AAGTCACTATTGACAAGGTT+GGG | + | tig0004173:12793-12812 | Msa1340510:intergenic | 35.0% | |
| TAAGTCACTATTGACAAGGT+TGG | + | tig0004173:12794-12813 | Msa1340510:intergenic | 35.0% | |
| GGTATAAGTCACTATTGACA+AGG | + | tig0004173:12798-12817 | Msa1340510:intergenic | 35.0% | |
| !!! | GTGTTTTTGCTGATTTATGC+TGG | - | tig0004173:12885-12904 | Msa1340510:intron | 35.0% |
| !!! | TACTTATTTTGCAGGTCCAA+GGG | - | tig0004173:12964-12983 | Msa1340510:CDS | 35.0% |
| ATATTTCCTGGCCAAAAGTA+CGG | + | tig0004173:13037-13056 | Msa1340510:intergenic | 35.0% | |
| !!! | TTTGTTAGCCTTTTCCGAAA+AGG | - | tig0004173:13067-13086 | Msa1340510:intron | 35.0% |
| ! | GTAATTCACCTTTTCGGAAA+AGG | + | tig0004173:13078-13097 | Msa1340510:intergenic | 35.0% |
| GAAAAGGTGAATTACATGCA+TGG | - | tig0004173:13083-13102 | Msa1340510:intron | 35.0% | |
| ! | ACCCATGTAACAACATTTTC+AGG | - | tig0004173:13204-13223 | Msa1340510:intron | 35.0% |
| GCTATCCCTTGCTTAAATAT+TGG | - | tig0004173:13290-13309 | Msa1340510:intron | 35.0% | |
| GGAAAGCCAATATTTAAGCA+AGG | + | tig0004173:13299-13318 | Msa1340510:intergenic | 35.0% | |
| TAACATGGACAGCTTAATGA+TGG | - | tig0004173:13394-13413 | Msa1340510:CDS | 35.0% | |
| ! | GTTGACATAAGATTAGCTCA+GGG | - | tig0004173:13617-13636 | Msa1340510:CDS | 35.0% |
| GAAAGAAGGTAAACTACGAT+AGG | - | tig0004173:13787-13806 | Msa1340510:intron | 35.0% | |
| CGATAGGTTTCACAAAAAGA+TGG | - | tig0004173:13803-13822 | Msa1340510:intron | 35.0% | |
| AGAATAAGTCTCGTATTCAG+TGG | + | tig0004173:13948-13967 | Msa1340510:intergenic | 35.0% | |
| GTGATGTGACATTACATACA+TGG | + | tig0004173:14039-14058 | Msa1340510:intergenic | 35.0% | |
| TGTAATGTCACATCACTTTG+TGG | - | tig0004173:14043-14062 | Msa1340510:intron | 35.0% | |
| ACGTTGAATAATACTCCATC+CGG | + | tig0004173:14217-14236 | Msa1340510:intergenic | 35.0% | |
| ! | GTTTGGCTTAAATGCACTAT+CGG | + | tig0004173:14368-14387 | Msa1340510:intergenic | 35.0% |
| GCTTATCTGCAAATCAAGAA+AGG | - | tig0004173:14468-14487 | Msa1340510:intron | 35.0% | |
| AAATCAAGAAAGGACAGAGA+TGG | - | tig0004173:14478-14497 | Msa1340510:intron | 35.0% | |
| ! | TGGAGAAGAAAAGACTTGTT+TGG | - | tig0004173:14498-14517 | Msa1340510:intron | 35.0% |
| ! | AGACTTGTTTGGAAAGTAGA+AGG | - | tig0004173:14509-14528 | Msa1340510:intron | 35.0% |
| ! | GACTTGTTTGGAAAGTAGAA+GGG | - | tig0004173:14510-14529 | Msa1340510:intron | 35.0% |
| TCAGACTTTACAACTATGAC+AGG | + | tig0004173:14733-14752 | Msa1340510:intergenic | 35.0% | |
| ! | AGTCTGAAGCCTTTAATTCT+TGG | - | tig0004173:14746-14765 | Msa1340510:five_prime_UTR | 35.0% |
| !! | ATTTATGGAAGCTGTTTTGG+AGG | + | tig0004173:14801-14820 | Msa1340510:intergenic | 35.0% |
| TAACAAGTTCCATTCTTACG+TGG | + | tig0004173:14869-14888 | Msa1340510:intergenic | 35.0% | |
| ! | ACGTAAGAATGGAACTTGTT+AGG | - | tig0004173:14868-14887 | Msa1340510:intron | 35.0% |
| TATCAATTGAGATGTCCATG+GGG | - | tig0004173:14952-14971 | Msa1340510:five_prime_UTR | 35.0% | |
| !! | ATTGATTTGAATTGTCCCCA+TGG | + | tig0004173:14970-14989 | Msa1340510:intergenic | 35.0% |
| CACCTTTATCTCTGTACCAT+TGG | - | tig0004173:348-367 | Msa1340510:three_prime_UTR | 40.0% | |
| TCTGTACCATTGGATACACA+TGG | - | tig0004173:358-377 | Msa1340510:three_prime_UTR | 40.0% | |
| TCACTTCCATGTGTATCCAA+TGG | + | tig0004173:367-386 | Msa1340510:intergenic | 40.0% | |
| !! | GAAAGAAGAGTACTTCCACT+TGG | + | tig0004173:428-447 | Msa1340510:intergenic | 40.0% |
| !! | GATCTTTTTGGTGACCCTTT+TGG | - | tig0004173:568-587 | Msa1340510:three_prime_UTR | 40.0% |
| ! | GCTCATACTCATGATGATGT+TGG | - | tig0004173:680-699 | Msa1340510:CDS | 40.0% |
| ! | CTCTATTGGCTGATAAGAAC+AGG | - | tig0004173:882-901 | Msa1340510:intron | 40.0% |
| GTTACTACTTGTGTGCATAG+AGG | - | tig0004173:992-1011 | Msa1340510:intron | 40.0% | |
| ACAATCAACACTTCTCCTCA+GGG | + | tig0004173:1104-1123 | Msa1340510:intergenic | 40.0% | |
| TACAATCAACACTTCTCCTC+AGG | + | tig0004173:1105-1124 | Msa1340510:intergenic | 40.0% | |
| TTTACATGTGAACCCAATGC+AGG | - | tig0004173:1342-1361 | Msa1340510:intron | 40.0% | |
| !! | GTTAAGCAGCTTGTTAGTTC+GGG | - | tig0004173:1415-1434 | Msa1340510:intron | 40.0% |
| AGTCATCCTTCATGTTTGTG+AGG | - | tig0004173:1496-1515 | Msa1340510:intron | 40.0% | |
| GTCATCCTTCATGTTTGTGA+GGG | - | tig0004173:1497-1516 | Msa1340510:intron | 40.0% | |
| CGAACTCCTCTTTCAGAAAT+CGG | + | tig0004173:1667-1686 | Msa1340510:intergenic | 40.0% | |
| TGCTGTGCAGGCTTATTTAT+TGG | - | tig0004173:1733-1752 | Msa1340510:CDS | 40.0% | |
| GCTGTGCAGGCTTATTTATT+GGG | - | tig0004173:1734-1753 | Msa1340510:CDS | 40.0% | |
| !! | AACTGTCAGAAGTACTATGC+AGG | - | tig0004173:1822-1841 | Msa1340510:intron | 40.0% |
| GTAGGATCGATTACCAAGAT+AGG | - | tig0004173:1869-1888 | Msa1340510:intron | 40.0% | |
| CAAAAAGGAGAAGAGTCTTG+AGG | - | tig0004173:1900-1919 | Msa1340510:intron | 40.0% | |
| AGAAGAGTCTTGAGGTTATC+TGG | - | tig0004173:1908-1927 | Msa1340510:intron | 40.0% | |
| AAGGAGGTTCATAGTTCTCA+GGG | + | tig0004173:2125-2144 | Msa1340510:intergenic | 40.0% | |
| TTTGACTACTTCCTGCTTGA+AGG | - | tig0004173:2255-2274 | Msa1340510:CDS | 40.0% | |
| CTGCATAGGATTAACTCTGA+AGG | - | tig0004173:2560-2579 | Msa1340510:intron | 40.0% | |
| CTCGGACAAATCACATTATG+TGG | - | tig0004173:2865-2884 | Msa1340510:CDS | 40.0% | |
| GCTCATTCATTACGTGAACA+AGG | - | tig0004173:2947-2966 | Msa1340510:CDS | 40.0% | |
| ACTTAGAACCCTAGTCAAAG+GGG | + | tig0004173:2979-2998 | Msa1340510:intergenic | 40.0% | |
| GAACTTAGAACCCTAGTCAA+AGG | + | tig0004173:2981-3000 | Msa1340510:intergenic | 40.0% | |
| ! | TTGGATGCACAACTTTAGGA+TGG | - | tig0004173:3070-3089 | Msa1340510:intron | 40.0% |
| GAAAACGTCATACAGGGAAA+AGG | + | tig0004173:3244-3263 | Msa1340510:intergenic | 40.0% | |
| CGCTATGTCAGATTAATGAG+TGG | - | tig0004173:3350-3369 | Msa1340510:CDS | 40.0% | |
| TAATGACATTGTCTCTGTGC+AGG | - | tig0004173:3703-3722 | Msa1340510:intron | 40.0% | |
| ! | GTTGAATCAACATCGGTTAC+TGG | - | tig0004173:3761-3780 | Msa1340510:intron | 40.0% |
| ! | ACAGAAGTTGAACTGGTTCA+AGG | - | tig0004173:4049-4068 | Msa1340510:intron | 40.0% |
| ! | ACTGGTTCAAGGAAAGAGTT+TGG | - | tig0004173:4060-4079 | Msa1340510:intron | 40.0% |
| ATAACTCTCTTGGTTGGAAG+AGG | - | tig0004173:4205-4224 | Msa1340510:intron | 40.0% | |
| TTGAAGCTGCAAACATTTGC+AGG | - | tig0004173:4718-4737 | Msa1340510:intron | 40.0% | |
| GTTACAGTTCATGACTCCAA+CGG | - | tig0004173:4755-4774 | Msa1340510:intron | 40.0% | |
| TCAGTTTCTGTACCACCATT+TGG | - | tig0004173:4899-4918 | Msa1340510:intron | 40.0% | |
| GAAAAGTCTTCCATAGGTCA+AGG | - | tig0004173:5099-5118 | Msa1340510:intron | 40.0% | |
| TACAAACATGCTGAGAGGAA+AGG | + | tig0004173:5263-5282 | Msa1340510:intergenic | 40.0% | |
| !!! | ACTTTTGACTTGGAAGGTTG+AGG | - | tig0004173:5345-5364 | Msa1340510:intron | 40.0% |
| TGATCAAAAAGATCCACAGG+TGG | - | tig0004173:5414-5433 | Msa1340510:intron | 40.0% | |
| GATCAAAAAGATCCACAGGT+GGG | - | tig0004173:5415-5434 | Msa1340510:intron | 40.0% | |
| TAGTAAGAATAACCCACCTG+TGG | + | tig0004173:5430-5449 | Msa1340510:intergenic | 40.0% | |
| GCTTATATCTTCCGTCCAAA+TGG | - | tig0004173:5536-5555 | Msa1340510:intron | 40.0% | |
| TGCATCAACGAATCAATCCA+TGG | - | tig0004173:5709-5728 | Msa1340510:intron | 40.0% | |
| CAAGTGTCATCTTCATGCTT+AGG | - | tig0004173:5934-5953 | Msa1340510:intron | 40.0% | |
| TCTACCAATCTCCATCTTGT+GGG | + | tig0004173:5990-6009 | Msa1340510:intergenic | 40.0% | |
| ATCTACCAATCTCCATCTTG+TGG | + | tig0004173:5991-6010 | Msa1340510:intergenic | 40.0% | |
| ATCCCAGCTTGGAAAGTAAA+AGG | - | tig0004173:6019-6038 | Msa1340510:intron | 40.0% | |
| ! | GAAGTTTTTCCCTCACAATG+TGG | - | tig0004173:6130-6149 | Msa1340510:intron | 40.0% |
| GATTGATTGCCACATTGTGA+GGG | + | tig0004173:6142-6161 | Msa1340510:intergenic | 40.0% | |
| AGATTGATTGCCACATTGTG+AGG | + | tig0004173:6143-6162 | Msa1340510:intergenic | 40.0% | |
| CTGCAACTTGTGAACTTCAA+TGG | + | tig0004173:6290-6309 | Msa1340510:intergenic | 40.0% | |
| TGTGTCAAGATCATCTTCAG+AGG | + | tig0004173:6334-6353 | Msa1340510:intergenic | 40.0% | |
| GAAGATGATCTTGACACAGT+AGG | - | tig0004173:6336-6355 | Msa1340510:intron | 40.0% | |
| ! | ATTGACCCAAAAAGAAGCAC+TGG | - | tig0004173:6388-6407 | Msa1340510:intron | 40.0% |
| CCTCAGGTTTACATATTCAG+GGG | + | tig0004173:6467-6486 | Msa1340510:intergenic | 40.0% | |
| CTCTCAGAGCTGCATTATAA+TGG | - | tig0004173:6538-6557 | Msa1340510:intron | 40.0% | |
| ACTAAGTTGCTGAGTGATGA+AGG | - | tig0004173:6587-6606 | Msa1340510:intron | 40.0% | |
| TCTGCTTATAGGAGATTGGT+GGG | + | tig0004173:6651-6670 | Msa1340510:intergenic | 40.0% | |
| TTCTGCTTATAGGAGATTGG+TGG | + | tig0004173:6652-6671 | Msa1340510:intergenic | 40.0% | |
| TAACTTGATGGAAGGATCAG+AGG | - | tig0004173:6704-6723 | Msa1340510:intron | 40.0% | |
| AACTTGATGGAAGGATCAGA+GGG | - | tig0004173:6705-6724 | Msa1340510:intron | 40.0% | |
| !! | CTGGATTTGTTAACTGACTC+AGG | + | tig0004173:6759-6778 | Msa1340510:intergenic | 40.0% |
| ! | GAAGTATTTCTTGGGACTAG+AGG | + | tig0004173:6829-6848 | Msa1340510:intergenic | 40.0% |
| !! | GTTGATGATATCATCCTTGC+TGG | + | tig0004173:6927-6946 | Msa1340510:intergenic | 40.0% |
| TATCAGCAATGGCTACAAAC+AGG | + | tig0004173:7015-7034 | Msa1340510:intergenic | 40.0% | |
| ACTGGACTTCTTATCAGCAA+TGG | + | tig0004173:7026-7045 | Msa1340510:intergenic | 40.0% | |
| TCAAGCAAGCCAGTAGAAAA+TGG | + | tig0004173:7061-7080 | Msa1340510:intergenic | 40.0% | |
| GTTTACATGACTATACCACC+AGG | + | tig0004173:7140-7159 | Msa1340510:intergenic | 40.0% | |
| CTTTGGCATCAATCAATCAC+TGG | + | tig0004173:7220-7239 | Msa1340510:intergenic | 40.0% | |
| CAAAGTCACAACTGTGAGAT+TGG | + | tig0004173:7249-7268 | Msa1340510:intergenic | 40.0% | |
| CAATCTCACAGTTGTGACTT+TGG | - | tig0004173:7247-7266 | Msa1340510:intron | 40.0% | |
| ! | TGGCTCTATTGAGAGATACA+AGG | + | tig0004173:7342-7361 | Msa1340510:intergenic | 40.0% |
| CCTTCATCAGTCAAACCTAT+AGG | + | tig0004173:7401-7420 | Msa1340510:intergenic | 40.0% | |
| CCTATAGGTTTGACTGATGA+AGG | - | tig0004173:7398-7417 | Msa1340510:intron | 40.0% | |
| ! | AGGAAGATCCACAATTTTCC+AGG | - | tig0004173:7418-7437 | Msa1340510:intron | 40.0% |
| AACTGGAACCTGGAAAATTG+TGG | + | tig0004173:7429-7448 | Msa1340510:intergenic | 40.0% | |
| AGGCCATCAAATATGACTGT+TGG | + | tig0004173:7490-7509 | Msa1340510:intergenic | 40.0% | |
| ! | ATATTTGATGGCCTCAGCAT+AGG | - | tig0004173:7496-7515 | Msa1340510:intron | 40.0% |
| ! | ATTCTAAGGGGAACAGGAAT+AGG | - | tig0004173:7701-7720 | Msa1340510:intron | 40.0% |
| GATGTAGAAGAGGTTGAAGA+TGG | - | tig0004173:7767-7786 | Msa1340510:intron | 40.0% | |
| TTGAAGATGGTGAAGATGGA+GGG | - | tig0004173:7780-7799 | Msa1340510:intron | 40.0% | |
| !! | GTGAATGTCATGAGTTGGTA+AGG | - | tig0004173:7802-7821 | Msa1340510:intron | 40.0% |
| !! | ATGTCATGAGTTGGTAAGGA+TGG | - | tig0004173:7806-7825 | Msa1340510:intron | 40.0% |
| ATCAGAGACATATTGCCAGT+TGG | - | tig0004173:7892-7911 | Msa1340510:intron | 40.0% | |
| ! | GTTTTCTTGGGATACAAGTC+AGG | + | tig0004173:8028-8047 | Msa1340510:intergenic | 40.0% |
| GAATGTCTGGTAAAGAGTCA+TGG | - | tig0004173:8134-8153 | Msa1340510:intron | 40.0% | |
| GAGTTTCAACACAAGCTCTT+TGG | - | tig0004173:8335-8354 | Msa1340510:intron | 40.0% | |
| TTTCAACACAAGCTCTTTGG+TGG | - | tig0004173:8338-8357 | Msa1340510:intron | 40.0% | |
| TTGGCTCAAACTTCCATTCA+TGG | + | tig0004173:8568-8587 | Msa1340510:intergenic | 40.0% | |
| TGAATGGAAGTTTGAGCCAA+AGG | - | tig0004173:8568-8587 | Msa1340510:intron | 40.0% | |
| ! | TTTTGATATTTGGGGGCCTT+TGG | + | tig0004173:8587-8606 | Msa1340510:intergenic | 40.0% |
| GGGATACAATTGATGCATCT+TGG | - | tig0004173:8720-8739 | Msa1340510:intron | 40.0% | |
| GCAATCTGGCACTTTAGATT+AGG | + | tig0004173:8769-8788 | Msa1340510:intergenic | 40.0% | |
| AAGTGCCAGATTGCATTAGA+AGG | - | tig0004173:8775-8794 | Msa1340510:intron | 40.0% | |
| AGTGCCAGATTGCATTAGAA+GGG | - | tig0004173:8776-8795 | Msa1340510:intron | 40.0% | |
| CTATCCCTTCTAATGCAATC+TGG | + | tig0004173:8783-8802 | Msa1340510:intergenic | 40.0% | |
| CAGATTGCATTAGAAGGGAT+AGG | - | tig0004173:8781-8800 | Msa1340510:intron | 40.0% | |
| GATTGCATTAGAAGGGATAG+GGG | - | tig0004173:8783-8802 | Msa1340510:intron | 40.0% | |
| GATAGGGGAAACAACTACAT+TGG | - | tig0004173:8798-8817 | Msa1340510:intron | 40.0% | |
| GTGTTTGTGATGGTCTCTAT+AGG | + | tig0004173:8924-8943 | Msa1340510:intergenic | 40.0% | |
| !! | TCTCAGAGGATGATTGGTTT+GGG | + | tig0004173:8949-8968 | Msa1340510:intergenic | 40.0% |
| ! | ATCTCAGAGGATGATTGGTT+TGG | + | tig0004173:8950-8969 | Msa1340510:intergenic | 40.0% |
| TACAGGACATGAAATCTCAG+AGG | + | tig0004173:8963-8982 | Msa1340510:intergenic | 40.0% | |
| AGTGTTTATACCTGAGGTGA+AGG | - | tig0004173:9284-9303 | Msa1340510:intron | 40.0% | |
| TTTATACCTGAGGTGAAGGA+AGG | - | tig0004173:9288-9307 | Msa1340510:intron | 40.0% | |
| TCTTCTATGGTTTCTCAGAC+TGG | + | tig0004173:9426-9445 | Msa1340510:intergenic | 40.0% | |
| !! | AGTTGGTGAAGGATCTTCTA+TGG | + | tig0004173:9439-9458 | Msa1340510:intergenic | 40.0% |
| !! | GATTCTCAATCAGTTGGTGA+AGG | + | tig0004173:9450-9469 | Msa1340510:intergenic | 40.0% |
| ATGATTGTTCCTGTGGCAAA+AGG | - | tig0004173:9560-9579 | Msa1340510:intron | 40.0% | |
| AGATTGAGGAAAACCAGAAG+AGG | - | tig0004173:9605-9624 | Msa1340510:intron | 40.0% | |
| GAAGACTCAAGTTCTTCTCA+TGG | + | tig0004173:9781-9800 | Msa1340510:intergenic | 40.0% | |
| TGCTAGAGAATTTCGCATTG+AGG | + | tig0004173:9853-9872 | Msa1340510:intergenic | 40.0% | |
| CGCATAGATTCACATCTACA+AGG | - | tig0004173:9876-9895 | Msa1340510:CDS | 40.0% | |
| AGAGATGAAATCTCTTTGGG+AGG | + | tig0004173:9946-9965 | Msa1340510:intergenic | 40.0% | |
| TGATGTTTGGATTGAGCTTC+AGG | + | tig0004173:10066-10085 | Msa1340510:intergenic | 40.0% | |
| ! | ACAATGGTTTGCGCAATTTG+CGG | - | tig0004173:10104-10123 | Msa1340510:CDS | 40.0% |
| !! | AACAAGCTTGCTTTTGTGGA+CGG | + | tig0004173:10224-10243 | Msa1340510:intergenic | 40.0% |
| !! | GAAGAACAAGCTTGCTTTTG+TGG | + | tig0004173:10228-10247 | Msa1340510:intergenic | 40.0% |
| ACCGTTAAGAAGAGGAGTAA+CGG | - | tig0004173:10295-10314 | Msa1340510:intron | 40.0% | |
| ACCGTTACTCCTCTTCTTAA+CGG | + | tig0004173:10299-10318 | Msa1340510:intergenic | 40.0% | |
| GGAGTAACGGTAACTGAATT+TGG | - | tig0004173:10308-10327 | Msa1340510:intron | 40.0% | |
| GCTTAAAGCTCAAGCTTCAA+TGG | - | tig0004173:10612-10631 | Msa1340510:intron | 40.0% | |
| TAAAGCTCAAGCTTCAATGG+CGG | - | tig0004173:10615-10634 | Msa1340510:intron | 40.0% | |
| CAAGTGTCATCTTCATGCTT+AGG | - | tig0004173:5934-5953 | Msa1340510:intron | 40.0% | |
| GGTCCTATACCTATTGAAGA+TGG | - | tig0004173:11249-11268 | Msa1340510:intron | 40.0% | |
| CATAGTAGTTGAAATCCGAG+TGG | + | tig0004173:11292-11311 | Msa1340510:intergenic | 40.0% | |
| CACTCGGATTTCAACTACTA+TGG | - | tig0004173:11290-11309 | Msa1340510:intron | 40.0% | |
| TGAAAAGTGACTCAAGTGCA+AGG | + | tig0004173:11450-11469 | Msa1340510:intergenic | 40.0% | |
| GGGTAATAATTTCCAGCAAC+GGG | + | tig0004173:11628-11647 | Msa1340510:intergenic | 40.0% | |
| !! | GACAGAATTCTCAGTTTTGG+TGG | - | tig0004173:11937-11956 | Msa1340510:CDS | 40.0% |
| !! | GTTTTGGTGGATAGAGCTAT+AGG | - | tig0004173:11950-11969 | Msa1340510:CDS | 40.0% |
| ! | TTGCTGCTTGATGATTCTAG+AGG | - | tig0004173:12392-12411 | Msa1340510:CDS | 40.0% |
| ! | TGTGTTGCTGACAATTGCAA+GGG | - | tig0004173:12443-12462 | Msa1340510:intron | 40.0% |
| !! | TCACCGACTTTGAAAAACCA+GGG | - | tig0004173:12484-12503 | Msa1340510:intron | 40.0% |
| AAGAAAACAATGATAGCCCC+TGG | + | tig0004173:12504-12523 | Msa1340510:intergenic | 40.0% | |
| CTATCCGTGTTAAGACCAAT+TGG | + | tig0004173:12591-12610 | Msa1340510:intergenic | 40.0% | |
| TTGGTCAGCTTCCACTAAAA+TGG | + | tig0004173:12644-12663 | Msa1340510:intergenic | 40.0% | |
| ! | TTATACCTACCTAGCCTTTG+TGG | - | tig0004173:12811-12830 | Msa1340510:intron | 40.0% |
| AAAACTGCACATTGCCACAA+AGG | + | tig0004173:12828-12847 | Msa1340510:intergenic | 40.0% | |
| !!! | CTACTTATTTTGCAGGTCCA+AGG | - | tig0004173:12963-12982 | Msa1340510:CDS | 40.0% |
| TCGGAAAAGGCTAACAAAAG+TGG | + | tig0004173:13065-13084 | Msa1340510:intergenic | 40.0% | |
| GGTAGGATGATAAAGATGAC+TGG | - | tig0004173:13175-13194 | Msa1340510:intron | 40.0% | |
| !! | AGCATTGCTTTATTTGTGCG+CGG | - | tig0004173:13422-13441 | Msa1340510:CDS | 40.0% |
| TCCTTTCAGGAACTTGATCA+AGG | - | tig0004173:13507-13526 | Msa1340510:intron | 40.0% | |
| CCTTTCAGGAACTTGATCAA+GGG | - | tig0004173:13508-13527 | Msa1340510:intron | 40.0% | |
| CGTATAAATGCGCTAATCGA+AGG | + | tig0004173:13542-13561 | Msa1340510:intergenic | 40.0% | |
| TCGATTAGCGCATTTATACG+AGG | - | tig0004173:13542-13561 | Msa1340510:CDS | 40.0% | |
| ! | CGTTGACATAAGATTAGCTC+AGG | - | tig0004173:13616-13635 | Msa1340510:CDS | 40.0% |
| ! | GAGTTGAAAAAGCTTTTCCC+AGG | - | tig0004173:13765-13784 | Msa1340510:intron | 40.0% |
| ! | AAAGCTTTTCCCAGGAAAGA+AGG | - | tig0004173:13773-13792 | Msa1340510:intron | 40.0% |
| CGTAGTTTACCTTCTTTCCT+GGG | + | tig0004173:13785-13804 | Msa1340510:intergenic | 40.0% | |
| TCGTAGTTTACCTTCTTTCC+TGG | + | tig0004173:13786-13805 | Msa1340510:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | tig0004173:14199-14218 | Msa1340510:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | tig0004173:14198-14217 | Msa1340510:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+TGG | - | tig0004173:14199-14218 | Msa1340510:intron | 40.0% | |
| !! | ATAAGCGTCGAATTCGGTAT+TGG | - | tig0004173:14251-14270 | Msa1340510:intron | 40.0% |
| ! | GACTGAAGTATGCTTTTCCT+TGG | - | tig0004173:14417-14436 | Msa1340510:CDS | 40.0% |
| !! | TGGAAATGGAGGTGTTTCAA+GGG | - | tig0004173:14538-14557 | Msa1340510:CDS | 40.0% |
| !! | GTTAGCTCTTTTGGATCAAC+TGG | + | tig0004173:14569-14588 | Msa1340510:intergenic | 40.0% |
| TGATCCAAAAGAGCTAACTG+TGG | - | tig0004173:14571-14590 | Msa1340510:CDS | 40.0% | |
| ! | GTAAAAGTGCGGATTTCCAT+TGG | + | tig0004173:14605-14624 | Msa1340510:intergenic | 40.0% |
| GACATTACGACATGTAAGGT+TGG | + | tig0004173:14930-14949 | Msa1340510:intergenic | 40.0% | |
| CACTGTGCATGATAACCAAG+TGG | - | tig0004173:410-429 | Msa1340510:three_prime_UTR | 45.0% | |
| ! | CAGTAACGTTTTTCCGCTTC+TGG | - | tig0004173:490-509 | Msa1340510:three_prime_UTR | 45.0% |
| AACTCTTCACACTCCAGAAG+CGG | + | tig0004173:506-525 | Msa1340510:intergenic | 45.0% | |
| !!! | CGTCATTTTTCATCCCCCAA+TGG | - | tig0004173:535-554 | Msa1340510:three_prime_UTR | 45.0% |
| TGGGAAGCTCAATGTTCATC+TGG | - | tig0004173:655-674 | Msa1340510:CDS | 45.0% | |
| GGCTTGTGTGCAAAATGTGT+TGG | - | tig0004173:844-863 | Msa1340510:intron | 45.0% | |
| ! | CTGGTATAAGAGCATAGCAG+AGG | - | tig0004173:1304-1323 | Msa1340510:intron | 45.0% |
| GCTGAAAAAAGGCCTGCATT+GGG | + | tig0004173:1357-1376 | Msa1340510:intergenic | 45.0% | |
| ATCCCACCATCGCTGAAAAA+AGG | + | tig0004173:1368-1387 | Msa1340510:intergenic | 45.0% | |
| TTTCCATGTCACAGAAACGG+TGG | - | tig0004173:1575-1594 | Msa1340510:intron | 45.0% | |
| TGGCATGTGTATGCATGATG+AGG | - | tig0004173:1595-1614 | Msa1340510:intron | 45.0% | |
| !! | TGGACACCGATTTCTGAAAG+AGG | - | tig0004173:1658-1677 | Msa1340510:intron | 45.0% |
| TGCACAGCAGAATGTCCAAA+CGG | + | tig0004173:1722-1741 | Msa1340510:intergenic | 45.0% | |
| !! | GTCAGAAGTACTATGCAGGT+TGG | - | tig0004173:1826-1845 | Msa1340510:intron | 45.0% |
| AGTCTTGAGGTTATCTGGCA+AGG | - | tig0004173:1913-1932 | Msa1340510:intron | 45.0% | |
| GTGTTCTTCCAGATCTTTGC+TGG | - | tig0004173:2093-2112 | Msa1340510:intron | 45.0% | |
| GAAGGAGGTTCATAGTTCTC+AGG | + | tig0004173:2126-2145 | Msa1340510:intergenic | 45.0% | |
| GAGAACTATGAACCTCCTTC+TGG | - | tig0004173:2126-2145 | Msa1340510:intron | 45.0% | |
| TCTAGCACACCAGACATGAA+CGG | + | tig0004173:2471-2490 | Msa1340510:intergenic | 45.0% | |
| AGTACATCCACACTGCAAGT+AGG | + | tig0004173:2511-2530 | Msa1340510:intergenic | 45.0% | |
| !! | ACATACATGGTACCGACAGT+TGG | - | tig0004173:2920-2939 | Msa1340510:CDS | 45.0% |
| GAATGAGCTTGTCCAACTGT+CGG | + | tig0004173:2935-2954 | Msa1340510:intergenic | 45.0% | |
| CTTAGAACCCTAGTCAAAGG+GGG | + | tig0004173:2978-2997 | Msa1340510:intergenic | 45.0% | |
| CAGATCGTGCAAATGGTTTC+TGG | - | tig0004173:3294-3313 | Msa1340510:CDS | 45.0% | |
| CTGACATAGCGTTTCAAAGC+TGG | + | tig0004173:3341-3360 | Msa1340510:intergenic | 45.0% | |
| TTTAGAGGGCGAAAGAACTC+AGG | - | tig0004173:3495-3514 | Msa1340510:intron | 45.0% | |
| TTAGAGGGCGAAAGAACTCA+GGG | - | tig0004173:3496-3515 | Msa1340510:intron | 45.0% | |
| ACGATTGGCAATAGGCTACA+AGG | - | tig0004173:3617-3636 | Msa1340510:intron | 45.0% | |
| ATTGGCAATAGGCTACAAGG+AGG | - | tig0004173:3620-3639 | Msa1340510:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0004173:3924-3943 | Msa1340510:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0004173:3925-3944 | Msa1340510:intergenic | 45.0% |
| TCCTGCAACAGAAGTTGAAC+TGG | - | tig0004173:4042-4061 | Msa1340510:intron | 45.0% | |
| ACCAGTTCAACTTCTGTTGC+AGG | + | tig0004173:4046-4065 | Msa1340510:intergenic | 45.0% | |
| GTGATTCGAATTCCTGTGAG+TGG | - | tig0004173:4234-4253 | Msa1340510:CDS | 45.0% | |
| ACTAAAATGGCACCACTCAC+AGG | + | tig0004173:4249-4268 | Msa1340510:intergenic | 45.0% | |
| TCAAATTCTACCTCTGGCTG+AGG | - | tig0004173:4793-4812 | Msa1340510:intron | 45.0% | |
| TCTACAAATACCTCAGCCAG+AGG | + | tig0004173:4806-4825 | Msa1340510:intergenic | 45.0% | |
| CAATACTTGGGTGTCTTGGA+TGG | + | tig0004173:4869-4888 | Msa1340510:intergenic | 45.0% | |
| CATCCAAGACACCCAAGTAT+TGG | - | tig0004173:4867-4886 | Msa1340510:intron | 45.0% | |
| AAGCCAATACTTGGGTGTCT+TGG | + | tig0004173:4873-4892 | Msa1340510:intergenic | 45.0% | |
| GTCTCGACTGCCAAAAAAAC+AGG | - | tig0004173:4938-4957 | Msa1340510:intron | 45.0% | |
| TACCAATCTCCATCTTGTGG+GGG | + | tig0004173:5988-6007 | Msa1340510:intergenic | 45.0% | |
| CTACCAATCTCCATCTTGTG+GGG | + | tig0004173:5989-6008 | Msa1340510:intergenic | 45.0% | |
| GATGTCTAACAATCCCAGCT+TGG | - | tig0004173:6008-6027 | Msa1340510:intron | 45.0% | |
| GTGAGGGAAAAACTTCATGC+TGG | + | tig0004173:6126-6145 | Msa1340510:intergenic | 45.0% | |
| !! | CAAGATGTTTGGTGCGTTCA+TGG | - | tig0004173:6163-6182 | Msa1340510:intron | 45.0% |
| TTGGTGCGTTCATGGAAAAC+AGG | - | tig0004173:6171-6190 | Msa1340510:intron | 45.0% | |
| GCGTTCATGGAAAACAGGAT+TGG | - | tig0004173:6176-6195 | Msa1340510:intron | 45.0% | |
| !! | AAACAGGATTGGCTGCAATG+TGG | - | tig0004173:6187-6206 | Msa1340510:intron | 45.0% |
| CTGCAATGTGGATAGCACTT+TGG | - | tig0004173:6199-6218 | Msa1340510:intron | 45.0% | |
| AGAGGCTGAGTATAGAGCAA+TGG | + | tig0004173:6316-6335 | Msa1340510:intergenic | 45.0% | |
| ! | TCAGGCCAGTGCTTCTTTTT+GGG | + | tig0004173:6396-6415 | Msa1340510:intergenic | 45.0% |
| CAGGATGCAAAGATACCAGA+AGG | + | tig0004173:6425-6444 | Msa1340510:intergenic | 45.0% | |
| CCCCTGAATATGTAAACCTG+AGG | - | tig0004173:6464-6483 | Msa1340510:intron | 45.0% | |
| ! | CTTTTCTTTCCCAGATCCTC+AGG | + | tig0004173:6483-6502 | Msa1340510:intergenic | 45.0% |
| CTGAGGATCTGGGAAAGAAA+AGG | - | tig0004173:6481-6500 | Msa1340510:intron | 45.0% | |
| TGAGTGATGAAGGTGATGTC+TGG | - | tig0004173:6597-6616 | Msa1340510:intron | 45.0% | |
| CTGCTTATAGGAGATTGGTG+GGG | + | tig0004173:6650-6669 | Msa1340510:intergenic | 45.0% | |
| GAGGTTGCTCACTCTCAAAA+TGG | + | tig0004173:6810-6829 | Msa1340510:intergenic | 45.0% | |
| !! | TGGCTTGCTTGAGTCCATAA+AGG | - | tig0004173:7069-7088 | Msa1340510:intron | 45.0% |
| ! | GGCTTGCTTGAGTCCATAAA+GGG | - | tig0004173:7070-7089 | Msa1340510:intron | 45.0% |
| !!! | GGTTTTGAAGTAGTGACACC+TGG | - | tig0004173:7119-7138 | Msa1340510:intron | 45.0% |
| ! | TTTGAAGTAGTGACACCTGG+TGG | - | tig0004173:7122-7141 | Msa1340510:intron | 45.0% |
| ACAGTTGTGACTTTGGCAAC+TGG | - | tig0004173:7254-7273 | Msa1340510:intron | 45.0% | |
| AAGGCACGTTTAGTAGCCAA+GGG | + | tig0004173:7323-7342 | Msa1340510:intergenic | 45.0% | |
| TAAACCCATCTGCACCCTAT+AGG | - | tig0004173:7383-7402 | Msa1340510:intron | 45.0% | |
| CAAACCTATAGGGTGCAGAT+GGG | + | tig0004173:7390-7409 | Msa1340510:intergenic | 45.0% | |
| TCAAACCTATAGGGTGCAGA+TGG | + | tig0004173:7391-7410 | Msa1340510:intergenic | 45.0% | |
| CTCTTGATCAAACTGGAACC+TGG | + | tig0004173:7439-7458 | Msa1340510:intergenic | 45.0% | |
| CTTGCTGCTCTTGATCAAAC+TGG | + | tig0004173:7446-7465 | Msa1340510:intergenic | 45.0% | |
| CTGTTGGAAACAAGCAATGC+AGG | + | tig0004173:7474-7493 | Msa1340510:intergenic | 45.0% | |
| ATGGCCTCAGCATAGGATTT+GGG | - | tig0004173:7503-7522 | Msa1340510:intron | 45.0% | |
| TGAACCCAAATCCTATGCTG+AGG | + | tig0004173:7510-7529 | Msa1340510:intergenic | 45.0% | |
| ! | GTGGAAATTCTAAGGGGAAC+AGG | - | tig0004173:7695-7714 | Msa1340510:intron | 45.0% |
| ACAGGAATAGGTGAAGGTGA+TGG | - | tig0004173:7713-7732 | Msa1340510:intron | 45.0% | |
| !! | ATAGGTGAAGGTGATGGAGA+AGG | - | tig0004173:7719-7738 | Msa1340510:intron | 45.0% |
| AGGAGAGGATTCAGAATCAG+TGG | - | tig0004173:7739-7758 | Msa1340510:intron | 45.0% | |
| GGAGAGGATTCAGAATCAGT+GGG | - | tig0004173:7740-7759 | Msa1340510:intron | 45.0% | |
| AGTGGGAGAAGATGTAGAAG+AGG | - | tig0004173:7757-7776 | Msa1340510:intron | 45.0% | |
| GAGGTTGAAGATGGTGAAGA+TGG | - | tig0004173:7776-7795 | Msa1340510:intron | 45.0% | |
| GTTGAAGATGGTGAAGATGG+AGG | - | tig0004173:7779-7798 | Msa1340510:intron | 45.0% | |
| !! | TGAGTTGGTAAGGATGGAGA+TGG | - | tig0004173:7812-7831 | Msa1340510:intron | 45.0% |
| GATGGAGAAGGAGGGTTTAA+AGG | - | tig0004173:7830-7849 | Msa1340510:intron | 45.0% | |
| AGAGACATATTGCCAGTTGG+TGG | - | tig0004173:7895-7914 | Msa1340510:intron | 45.0% | |
| !! | TATTGCCAGTTGGTGGTAGA+AGG | - | tig0004173:7902-7921 | Msa1340510:intron | 45.0% |
| TGTCTGGTAAAGAGTCATGG+AGG | - | tig0004173:8137-8156 | Msa1340510:intron | 45.0% | |
| GGTTTGGGTAGTGTTTGTGA+TGG | + | tig0004173:8934-8953 | Msa1340510:intergenic | 45.0% | |
| !! | TAATGTGGTTGGTGCTAGCA+GGG | - | tig0004173:9322-9341 | Msa1340510:intron | 45.0% |
| !! | TTCTCAGACTGGTTTGACTC+AGG | + | tig0004173:9415-9434 | Msa1340510:intergenic | 45.0% |
| CCACAGGAACAATCATACTG+TGG | + | tig0004173:9556-9575 | Msa1340510:intergenic | 45.0% | |
| CCACAGTATGATTGTTCCTG+TGG | - | tig0004173:9553-9572 | Msa1340510:intron | 45.0% | |
| ! | GATATTGCACCTTTTGCCAC+AGG | + | tig0004173:9572-9591 | Msa1340510:intergenic | 45.0% |
| GCTCGTAGAAAATCCTCTTC+TGG | + | tig0004173:9621-9640 | Msa1340510:intergenic | 45.0% | |
| GCTCTCTTCTTGAACAACCA+TGG | - | tig0004173:9725-9744 | Msa1340510:CDS | 45.0% | |
| GGAAAAGGACAAGTGCAAAC+AGG | - | tig0004173:9897-9916 | Msa1340510:CDS | 45.0% | |
| GCTTCAGGAACGATTCTCTA+AGG | + | tig0004173:10051-10070 | Msa1340510:intergenic | 45.0% | |
| GGCGTATTCATGACAGACAA+TGG | - | tig0004173:10088-10107 | Msa1340510:intron | 45.0% | |
| TTGCGCAATTTGCGGAGAAA+CGG | - | tig0004173:10112-10131 | Msa1340510:CDS | 45.0% | |
| ACTGAATTTGGTCCTTCGCT+TGG | - | tig0004173:10320-10339 | Msa1340510:intron | 45.0% | |
| TTCTACGTTCATCCAAGCGA+AGG | + | tig0004173:10335-10354 | Msa1340510:intergenic | 45.0% | |
| TGCAAGGTAGCATCTAGTGT+TGG | + | tig0004173:11434-11453 | Msa1340510:intergenic | 45.0% | |
| TTGTGGATTTCATCCTCTGC+AGG | - | tig0004173:11561-11580 | Msa1340510:intron | 45.0% | |
| TACGTGACTACAGAACAGAC+TGG | - | tig0004173:11584-11603 | Msa1340510:intron | 45.0% | |
| ACGTGACTACAGAACAGACT+GGG | - | tig0004173:11585-11604 | Msa1340510:intron | 45.0% | |
| AATAATTTCCAGCAACGGGC+TGG | + | tig0004173:11624-11643 | Msa1340510:intergenic | 45.0% | |
| ! | TTGGTGGATAGAGCTATAGG+AGG | - | tig0004173:11953-11972 | Msa1340510:CDS | 45.0% |
| GAGGATCCAGCTTAGAAGAT+GGG | - | tig0004173:11972-11991 | Msa1340510:CDS | 45.0% | |
| GATTTGCCCATCTTCTAAGC+TGG | + | tig0004173:11981-12000 | Msa1340510:intergenic | 45.0% | |
| !! | AAATCGAGTTGATGCTCCAC+AGG | - | tig0004173:11996-12015 | Msa1340510:intron | 45.0% |
| ! | TGTGGCCCTTTTGGCATATA+TGG | - | tig0004173:12137-12156 | Msa1340510:CDS | 45.0% |
| !! | AACTTGAGGCTTTAGAGCTC+TGG | - | tig0004173:12327-12346 | Msa1340510:CDS | 45.0% |
| ATCAAGCAGCAACCTCCTAT+TGG | + | tig0004173:12384-12403 | Msa1340510:intergenic | 45.0% | |
| !! | TGATTCTAGAGGTGTTGCAG+AGG | - | tig0004173:12403-12422 | Msa1340510:CDS | 45.0% |
| ! | CTGTGTTGCTGACAATTGCA+AGG | - | tig0004173:12442-12461 | Msa1340510:intron | 45.0% |
| !! | CTCACCGACTTTGAAAAACC+AGG | - | tig0004173:12483-12502 | Msa1340510:intron | 45.0% |
| !! | CACCGACTTTGAAAAACCAG+GGG | - | tig0004173:12485-12504 | Msa1340510:intron | 45.0% |
| !! | AGCCCCTGGTTTTTCAAAGT+CGG | + | tig0004173:12490-12509 | Msa1340510:intergenic | 45.0% |
| TAGAATAGACCCTTTGGGTG+AGG | - | tig0004173:12998-13017 | Msa1340510:intron | 45.0% | |
| AGAATAGACCCTTTGGGTGA+GGG | - | tig0004173:12999-13018 | Msa1340510:intron | 45.0% | |
| ! | ATTTAGCTCCCTCACCCAAA+GGG | + | tig0004173:13010-13029 | Msa1340510:intergenic | 45.0% |
| !! | GCATTGCTTTATTTGTGCGC+GGG | - | tig0004173:13423-13442 | Msa1340510:CDS | 45.0% |
| CCCTTGATCAAGTTCCTGAA+AGG | + | tig0004173:13511-13530 | Msa1340510:intergenic | 45.0% | |
| TCAGGAACTTGATCAAGGGA+CGG | - | tig0004173:13512-13531 | Msa1340510:intron | 45.0% | |
| ATTGGTCAACAGAGTGAGAG+AGG | + | tig0004173:13691-13710 | Msa1340510:intergenic | 45.0% | |
| TGCACAGATCGAAGAAGACA+AGG | - | tig0004173:13719-13738 | Msa1340510:intron | 45.0% | |
| TCTCTCTGTAGTGACAAGTG+TGG | - | tig0004173:13743-13762 | Msa1340510:intron | 45.0% | |
| TGAAACACCTCCATTTCCAG+AGG | + | tig0004173:14537-14556 | Msa1340510:intergenic | 45.0% | |
| !! | CTGGAAATGGAGGTGTTTCA+AGG | - | tig0004173:14537-14556 | Msa1340510:CDS | 45.0% |
| !! | GGAAATGGAGGTGTTTCAAG+GGG | - | tig0004173:14539-14558 | Msa1340510:CDS | 45.0% |
| !! | AGCTCCACAGTTAGCTCTTT+TGG | + | tig0004173:14578-14597 | Msa1340510:intergenic | 45.0% |
| ! | TTTTAACCCTCCGGTTTACG+TGG | - | tig0004173:14826-14845 | Msa1340510:five_prime_UTR | 45.0% |
| TTTAACCCTCCGGTTTACGT+GGG | - | tig0004173:14827-14846 | Msa1340510:five_prime_UTR | 45.0% | |
| TTTACGTGGGAAAAGGGCTA+TGG | - | tig0004173:14840-14859 | Msa1340510:five_prime_UTR | 45.0% | |
| TTACGTGGGAAAAGGGCTAT+GGG | - | tig0004173:14841-14860 | Msa1340510:five_prime_UTR | 45.0% | |
| CTATGGGTTCCACGTAAGAA+TGG | - | tig0004173:14857-14876 | Msa1340510:five_prime_UTR | 45.0% | |
| GGGGGATGAAAAATGACGAG+TGG | + | tig0004173:533-552 | Msa1340510:intergenic | 50.0% | |
| TTTCCATGCCTCTTTCCCTG+AGG | - | tig0004173:1086-1105 | Msa1340510:intron | 50.0% | |
| ACACTTCTCCTCAGGGAAAG+AGG | + | tig0004173:1097-1116 | Msa1340510:intergenic | 50.0% | |
| CGCTGAAAAAAGGCCTGCAT+TGG | + | tig0004173:1358-1377 | Msa1340510:intergenic | 50.0% | |
| !!! | TGCAGGCCTTTTTTCAGCGA+TGG | - | tig0004173:1359-1378 | Msa1340510:intron | 50.0% |
| !!! | AGGCCTTTTTTCAGCGATGG+TGG | - | tig0004173:1362-1381 | Msa1340510:intron | 50.0% |
| !!! | GGCCTTTTTTCAGCGATGGT+GGG | - | tig0004173:1363-1382 | Msa1340510:intron | 50.0% |
| ATGCCACCGTTTCTGTGACA+TGG | + | tig0004173:1581-1600 | Msa1340510:intergenic | 50.0% | |
| GGTTGGCAAATTGACCCGTT+TGG | - | tig0004173:1704-1723 | Msa1340510:intron | 50.0% | |
| GCACAGCAGAATGTCCAAAC+GGG | + | tig0004173:1721-1740 | Msa1340510:intergenic | 50.0% | |
| GTTTGGACATTCTGCTGTGC+AGG | - | tig0004173:1721-1740 | Msa1340510:intron | 50.0% | |
| GGAATGCACCAGCAAAGATC+TGG | + | tig0004173:2104-2123 | Msa1340510:intergenic | 50.0% | |
| ACCTTCACCTACTTGCAGTG+TGG | - | tig0004173:2501-2520 | Msa1340510:intron | 50.0% | |
| TCCACACTGCAAGTAGGTGA+AGG | + | tig0004173:2505-2524 | Msa1340510:intergenic | 50.0% | |
| AGGTATCACCCCCTTTGACT+AGG | - | tig0004173:2967-2986 | Msa1340510:intron | 50.0% | |
| GGTATCACCCCCTTTGACTA+GGG | - | tig0004173:2968-2987 | Msa1340510:intron | 50.0% | |
| ! | CGTGCAAATGGTTTCTGGAC+AGG | - | tig0004173:3299-3318 | Msa1340510:CDS | 50.0% |
| ! | GCGTTTCAAAGCTGGTCTAC+TGG | + | tig0004173:3333-3352 | Msa1340510:intergenic | 50.0% |
| CAACACCATGATGCAGTCAC+CGG | - | tig0004173:3558-3577 | Msa1340510:intron | 50.0% | |
| ! | GGAACTGGTTTCGTCATCAC+TGG | - | tig0004173:3730-3749 | Msa1340510:intron | 50.0% |
| !! | TTCGTCATCACTGGCTTGCT+TGG | - | tig0004173:3739-3758 | Msa1340510:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0004173:3920-3939 | Msa1340510:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0004173:3926-3945 | Msa1340510:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0004173:3923-3942 | Msa1340510:intron | 50.0% | |
| GTTCCAGTGACTGTTCTCCA+TGG | - | tig0004173:5669-5688 | Msa1340510:intron | 50.0% | |
| TGTAATAGCCCCCCACAAGA+TGG | - | tig0004173:5976-5995 | Msa1340510:intron | 50.0% | |
| ACCAATCTCCATCTTGTGGG+GGG | + | tig0004173:5987-6006 | Msa1340510:intergenic | 50.0% | |
| ! | CTCAGGCCAGTGCTTCTTTT+TGG | + | tig0004173:6397-6416 | Msa1340510:intergenic | 50.0% |
| !! | AAAGAAGCACTGGCCTGAGA+TGG | - | tig0004173:6398-6417 | Msa1340510:intron | 50.0% |
| GATACCAGAAGGTCCATCTC+AGG | + | tig0004173:6414-6433 | Msa1340510:intergenic | 50.0% | |
| TATACTGATGCAGACTGGGC+AGG | + | tig0004173:6444-6463 | Msa1340510:intergenic | 50.0% | |
| GGGGTATACTGATGCAGACT+GGG | + | tig0004173:6448-6467 | Msa1340510:intergenic | 50.0% | |
| ! | AGGGGTATACTGATGCAGAC+TGG | + | tig0004173:6449-6468 | Msa1340510:intergenic | 50.0% |
| !! | AGAGGGTGTACTGACTGGTT+TGG | - | tig0004173:6722-6741 | Msa1340510:intron | 50.0% |
| CAGCAAGAGAATCACCAGCA+AGG | - | tig0004173:6910-6929 | Msa1340510:intron | 50.0% | |
| CAAGGCACGTTTAGTAGCCA+AGG | + | tig0004173:7324-7343 | Msa1340510:intergenic | 50.0% | |
| GATGGCCTCAGCATAGGATT+TGG | - | tig0004173:7502-7521 | Msa1340510:intron | 50.0% | |
| AGGGGAACAGGAATAGGTGA+AGG | - | tig0004173:7707-7726 | Msa1340510:intron | 50.0% | |
| !! | TGAAGGTGATGGAGAAGGAG+AGG | - | tig0004173:7724-7743 | Msa1340510:intron | 50.0% |
| GGAGGGTGAATGTCATGAGT+TGG | - | tig0004173:7797-7816 | Msa1340510:intron | 50.0% | |
| GGTAAGGATGGAGATGGAGA+AGG | - | tig0004173:7818-7837 | Msa1340510:intron | 50.0% | |
| AAGGATGGAGATGGAGAAGG+AGG | - | tig0004173:7821-7840 | Msa1340510:intron | 50.0% | |
| AGGATGGAGATGGAGAAGGA+GGG | - | tig0004173:7822-7841 | Msa1340510:intron | 50.0% | |
| GGAGGGTTTAAAGGAGTGAC+TGG | - | tig0004173:7839-7858 | Msa1340510:intron | 50.0% | |
| CTTCTCCTTCTACCACCAAC+TGG | + | tig0004173:7910-7929 | Msa1340510:intergenic | 50.0% | |
| GAGTCATGGAGGACCTGATA+AGG | - | tig0004173:8148-8167 | Msa1340510:intron | 50.0% | |
| ACCTGAGGTGAAGGAAGGAA+TGG | - | tig0004173:9293-9312 | Msa1340510:intron | 50.0% | |
| TCCATTCCTTCCTTCACCTC+AGG | + | tig0004173:9297-9316 | Msa1340510:intergenic | 50.0% | |
| !! | GTAATGTGGTTGGTGCTAGC+AGG | - | tig0004173:9321-9340 | Msa1340510:intron | 50.0% |
| TCAGGAGCAGTATGGTCATC+TGG | + | tig0004173:9397-9416 | Msa1340510:intergenic | 50.0% | |
| GGTTTGACTCAGGAGCAGTA+TGG | + | tig0004173:9405-9424 | Msa1340510:intergenic | 50.0% | |
| AGGACAAGTGCAAACAGGCA+TGG | - | tig0004173:9902-9921 | Msa1340510:CDS | 50.0% | |
| GGACAAGTGCAAACAGGCAT+GGG | - | tig0004173:9903-9922 | Msa1340510:CDS | 50.0% | |
| CGTTCTATGCAACGTGCACT+TGG | + | tig0004173:10254-10273 | Msa1340510:intergenic | 50.0% | |
| ! | ACGGTTCTAACTACCTCGCA+TGG | + | tig0004173:10280-10299 | Msa1340510:intergenic | 50.0% |
| ! | AAGCTTCAATGGCGGAAGCT+AGG | - | tig0004173:10623-10642 | Msa1340510:intron | 50.0% |
| ! | AGCTTCAATGGCGGAAGCTA+GGG | - | tig0004173:10624-10643 | Msa1340510:intron | 50.0% |
| CTACAGAACAGACTGGGACT+TGG | - | tig0004173:11591-11610 | Msa1340510:intron | 50.0% | |
| GGAGGATCCAGCTTAGAAGA+TGG | - | tig0004173:11971-11990 | Msa1340510:CDS | 50.0% | |
| CATTGCCACAAAGGCTAGGT+AGG | + | tig0004173:12819-12838 | Msa1340510:intergenic | 50.0% | |
| TGCACATTGCCACAAAGGCT+AGG | + | tig0004173:12823-12842 | Msa1340510:intergenic | 50.0% | |
| ! | CATTTAGCTCCCTCACCCAA+AGG | + | tig0004173:13011-13030 | Msa1340510:intergenic | 50.0% |
| CTTTGGGTGAGGGAGCTAAA+TGG | - | tig0004173:13009-13028 | Msa1340510:intron | 50.0% | |
| ! | GCTAAATGGCGCCGTACTTT+TGG | - | tig0004173:13023-13042 | Msa1340510:intron | 50.0% |
| !! | TTGCTTTATTTGTGCGCGGG+TGG | - | tig0004173:13426-13445 | Msa1340510:CDS | 50.0% |
| TGGAAAGTAGAAGGGTCCTC+TGG | - | tig0004173:14518-14537 | Msa1340510:intron | 50.0% | |
| ! | GTAGAAGGGTCCTCTGGAAA+TGG | - | tig0004173:14524-14543 | Msa1340510:intron | 50.0% |
| !! | AATGGAGGTGTTTCAAGGGG+AGG | - | tig0004173:14542-14561 | Msa1340510:CDS | 50.0% |
| ! | AACTGTGGAGCTTGCTCCAA+TGG | - | tig0004173:14586-14605 | Msa1340510:CDS | 50.0% |
| ! | CTTTTCCCACGTAAACCGGA+GGG | + | tig0004173:14835-14854 | Msa1340510:intergenic | 50.0% |
| CTCCGGTTTACGTGGGAAAA+GGG | - | tig0004173:14834-14853 | Msa1340510:five_prime_UTR | 50.0% | |
| ! | AGCCCTTTTCCCACGTAAAC+CGG | + | tig0004173:14839-14858 | Msa1340510:intergenic | 50.0% |
| ACCTCACAGGGTGTAGTCTC+TGG | - | tig0004173:635-654 | Msa1340510:CDS | 55.0% | |
| CCTCACAGGGTGTAGTCTCT+GGG | - | tig0004173:636-655 | Msa1340510:CDS | 55.0% | |
| TCTCCTCAGGGAAAGAGGCA+TGG | + | tig0004173:1092-1111 | Msa1340510:intergenic | 55.0% | |
| TGGCAAGGTAGCAAGAGCCT+CGG | - | tig0004173:1928-1947 | Msa1340510:intron | 55.0% | |
| TCACCTGAGCAGATGAACCG+AGG | + | tig0004173:1948-1967 | Msa1340510:intergenic | 55.0% | |
| !!! | CACGTGCTGCTTTTCTGTGC+CGG | + | tig0004173:3580-3599 | Msa1340510:intergenic | 55.0% |
| CATTGTCTCTGTGCAGGCAG+AGG | - | tig0004173:3709-3728 | Msa1340510:intron | 55.0% | |
| ACAATGCCGACCCCACTTAG+TGG | - | tig0004173:3911-3930 | Msa1340510:intron | 55.0% | |
| CAATGCCGACCCCACTTAGT+GGG | - | tig0004173:3912-3931 | Msa1340510:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | tig0004173:3918-3937 | Msa1340510:intron | 55.0% | |
| GGTCCATGGAGAACAGTCAC+TGG | + | tig0004173:5675-5694 | Msa1340510:intergenic | 55.0% | |
| GGAAAGAAAAGGCCACGACC+TGG | - | tig0004173:6492-6511 | Msa1340510:intron | 55.0% | |
| CTTAAAGGCTCTCCAGGTCG+TGG | + | tig0004173:6507-6526 | Msa1340510:intergenic | 55.0% | |
| ! | GGATCAGAGGGTGTACTGAC+TGG | - | tig0004173:6717-6736 | Msa1340510:intron | 55.0% |
| !! | TGGTTGGTGCTAGCAGGGTT+AGG | - | tig0004173:9327-9346 | Msa1340510:intron | 55.0% |
| !! | GGGTTAGGACTGGTTGCTTG+AGG | - | tig0004173:9342-9361 | Msa1340510:intron | 55.0% |
| GCATAGAACGACTCCATGCG+AGG | - | tig0004173:10264-10283 | Msa1340510:intron | 55.0% | |
| ACTACAATCGGAGCTCGACG+AGG | - | tig0004173:10380-10399 | Msa1340510:CDS | 55.0% | |
| ! | CAATGGCGGAAGCTAGGGTT+TGG | - | tig0004173:10629-10648 | Msa1340510:intron | 55.0% |
| CTGTAGTCACGTACCTGCAG+AGG | + | tig0004173:11577-11596 | Msa1340510:intergenic | 55.0% | |
| ! | GGAAGCTGACCAAAGCGTCA+AGG | - | tig0004173:12651-12670 | Msa1340510:intron | 55.0% |
| GCTTGTCAGCATACTCCCTC+CGG | - | tig0004173:14065-14084 | Msa1340510:intron | 55.0% | |
| ! | GAAGGGTCCTCTGGAAATGG+AGG | - | tig0004173:14527-14546 | Msa1340510:intron | 55.0% |
| ! | CCTTTTCCCACGTAAACCGG+AGG | + | tig0004173:14836-14855 | Msa1340510:intergenic | 55.0% |
| CCTCCGGTTTACGTGGGAAA+AGG | - | tig0004173:14833-14852 | Msa1340510:five_prime_UTR | 55.0% | |
| CCCAGAGACTACACCCTGTG+AGG | + | tig0004173:639-658 | Msa1340510:intergenic | 60.0% | |
| GAGCCTCGGTTCATCTGCTC+AGG | - | tig0004173:1942-1961 | Msa1340510:intron | 60.0% | |
| ! | CTGTGCCGGTGACTGCATCA+TGG | + | tig0004173:3566-3585 | Msa1340510:intergenic | 60.0% |
| CGGCACAGAAAAGCAGCACG+TGG | - | tig0004173:3578-3597 | Msa1340510:intron | 60.0% | |
| CTCTGTGCAGGCAGAGGAAC+TGG | - | tig0004173:3715-3734 | Msa1340510:intron | 60.0% | |
| GCCCCCCACAAGATGGAGAT+TGG | - | tig0004173:5983-6002 | Msa1340510:intron | 60.0% | |
| CTGGCCTGAGATGGACCTTC+TGG | - | tig0004173:6407-6426 | Msa1340510:intron | 60.0% | |
| GGTGCTAGCAGGGTTAGGAC+TGG | - | tig0004173:9332-9351 | Msa1340510:intron | 60.0% | |
| ACAATCGGAGCTCGACGAGG+AGG | - | tig0004173:10383-10402 | Msa1340510:CDS | 60.0% | |
| ! | ATGGCGCCGTACTTTTGGCC+AGG | - | tig0004173:13028-13047 | Msa1340510:intron | 60.0% |
| GAAGTGCACCAGCCCGTTGC+TGG | - | tig0004173:11613-11632 | Msa1340510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0004173 | gene | 274 | 15017 | 274 | ID=Msa1340510;Name=Msa1340510 |
| tig0004173 | mRNA | 274 | 15017 | 274 | ID=Msa1340510-mRNA-1;Parent=Msa1340510;Name=Msa1340510-mRNA-1;_AED=0.11;_eAED=0.11;_QI=224|0.84|0.96|1|0.96|0.92|27|347|968 |
| tig0004173 | exon | 274 | 845 | 274 | ID=Msa1340510-mRNA-1:exon:2707;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 1728 | 1775 | 1728 | ID=Msa1340510-mRNA-1:exon:2706;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 2013 | 2111 | 2013 | ID=Msa1340510-mRNA-1:exon:2705;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 2203 | 2313 | 2203 | ID=Msa1340510-mRNA-1:exon:2704;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 2819 | 2966 | 2819 | ID=Msa1340510-mRNA-1:exon:2703;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 3274 | 3386 | 3274 | ID=Msa1340510-mRNA-1:exon:2702;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 3643 | 3708 | 3643 | ID=Msa1340510-mRNA-1:exon:2701;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 3926 | 4045 | 3926 | ID=Msa1340510-mRNA-1:exon:2700;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 4229 | 4276 | 4229 | ID=Msa1340510-mRNA-1:exon:2699;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 9705 | 9764 | 9705 | ID=Msa1340510-mRNA-1:exon:2698;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 9859 | 9930 | 9859 | ID=Msa1340510-mRNA-1:exon:2697;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 10103 | 10230 | 10103 | ID=Msa1340510-mRNA-1:exon:2696;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 10332 | 10551 | 10332 | ID=Msa1340510-mRNA-1:exon:2695;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 11043 | 11099 | 11043 | ID=Msa1340510-mRNA-1:exon:2694;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 11477 | 11566 | 11477 | ID=Msa1340510-mRNA-1:exon:2693;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 11650 | 11817 | 11650 | ID=Msa1340510-mRNA-1:exon:2692;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 11909 | 12002 | 11909 | ID=Msa1340510-mRNA-1:exon:2691;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 12103 | 12203 | 12103 | ID=Msa1340510-mRNA-1:exon:2690;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 12323 | 12436 | 12323 | ID=Msa1340510-mRNA-1:exon:2689;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 12943 | 13014 | 12943 | ID=Msa1340510-mRNA-1:exon:2688;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 13103 | 13186 | 13103 | ID=Msa1340510-mRNA-1:exon:2687;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 13328 | 13447 | 13328 | ID=Msa1340510-mRNA-1:exon:2686;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 13528 | 13702 | 13528 | ID=Msa1340510-mRNA-1:exon:2685;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 13839 | 13927 | 13839 | ID=Msa1340510-mRNA-1:exon:2684;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 14366 | 14449 | 14366 | ID=Msa1340510-mRNA-1:exon:2683;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 14537 | 14884 | 14537 | ID=Msa1340510-mRNA-1:exon:2682;Parent=Msa1340510-mRNA-1 |
| tig0004173 | exon | 14941 | 15017 | 14941 | ID=Msa1340510-mRNA-1:exon:2681;Parent=Msa1340510-mRNA-1 |
| tig0004173 | five_prime_UTR | 14941 | 15017 | 14941 | ID=Msa1340510-mRNA-1:five_prime_utr;Parent=Msa1340510-mRNA-1 |
| tig0004173 | five_prime_UTR | 14738 | 14884 | 14738 | ID=Msa1340510-mRNA-1:five_prime_utr;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 14537 | 14737 | 14537 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 14366 | 14449 | 14366 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 13839 | 13927 | 13839 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 13528 | 13702 | 13528 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 13328 | 13447 | 13328 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 13103 | 13186 | 13103 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 12943 | 13014 | 12943 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 12323 | 12436 | 12323 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 12103 | 12203 | 12103 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 11909 | 12002 | 11909 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 11650 | 11817 | 11650 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 11477 | 11566 | 11477 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 11043 | 11099 | 11043 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 10332 | 10551 | 10332 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 10103 | 10230 | 10103 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 9859 | 9930 | 9859 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 9705 | 9764 | 9705 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 4229 | 4276 | 4229 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 3926 | 4045 | 3926 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 3643 | 3708 | 3643 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 3274 | 3386 | 3274 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 2819 | 2966 | 2819 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 2203 | 2313 | 2203 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 2013 | 2111 | 2013 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 1728 | 1775 | 1728 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | CDS | 621 | 845 | 621 | ID=Msa1340510-mRNA-1:cds;Parent=Msa1340510-mRNA-1 |
| tig0004173 | three_prime_UTR | 274 | 620 | 274 | ID=Msa1340510-mRNA-1:three_prime_utr;Parent=Msa1340510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
