AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1370530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370530 MtrunA17_Chr4g0073941 98.363 733 8 2 1 731 1 731 0.0 1479
Msa1370530 MtrunA17_Chr4g0001481 64.286 742 246 10 1 727 1 738 0.0 949
Msa1370530 MtrunA17_Chr3g0126541 55.448 725 303 8 12 729 1 712 0.0 812
Msa1370530 MtrunA17_Chr1g0158861 57.018 684 277 8 55 729 40 715 0.0 800
Msa1370530 MtrunA17_Chr2g0305771 54.948 677 272 9 80 731 22 690 0.0 752
Msa1370530 MtrunA17_Chr3g0139071 55.275 673 265 9 87 731 61 725 0.0 736
Msa1370530 MtrunA17_Chr2g0326871 51.385 722 323 12 13 728 4 703 0.0 726
Msa1370530 MtrunA17_Chr7g0275581 51.681 714 307 11 38 727 16 715 0.0 715
Msa1370530 MtrunA17_Chr4g0028861 56.187 598 252 6 67 660 90 681 0.0 712
Msa1370530 MtrunA17_Chr1g0181121 52.096 668 298 11 78 731 24 683 0.0 700
Msa1370530 MtrunA17_Chr7g0228181 50.617 648 293 8 98 728 43 680 0.0 674
Msa1370530 MtrunA17_Chr8g0347121 49.627 671 295 8 95 725 56 723 0.0 670
Msa1370530 MtrunA17_Chr3g0125651 48.892 677 309 8 88 731 20 692 0.0 669
Msa1370530 MtrunA17_Chr6g0481021 41.297 586 302 13 99 660 123 690 3.51e-131 404
Msa1370530 MtrunA17_Chr6g0480671 39.899 594 322 13 98 673 192 768 6.61e-126 393
Msa1370530 MtrunA17_Chr8g0360821 38.380 568 331 10 101 656 64 624 4.74e-125 388
Msa1370530 MtrunA17_Chr6g0480851 39.794 583 316 13 99 663 184 749 3.91e-122 383
Msa1370530 MtrunA17_Chr6g0480781 36.960 579 331 12 99 659 169 731 7.77e-118 372
Msa1370530 MtrunA17_Chr7g0218341 38.542 576 326 11 98 656 108 672 4.11e-113 358
Msa1370530 MtrunA17_Chr6g0480741 35.826 575 330 12 98 653 114 668 1.62e-100 324
Msa1370530 MtrunA17_Chr2g0318561 38.126 459 254 12 215 656 2 447 4.48e-94 301
Msa1370530 MtrunA17_Chr6g0480681 34.043 611 330 19 99 661 115 700 1.72e-91 301
Msa1370530 MtrunA17_Chr5g0395421 38.310 355 188 11 297 637 18 355 8.85e-60 206
Msa1370530 MtrunA17_Chr2g0326861 43.147 197 106 3 174 368 14 206 8.84e-50 174
Msa1370530 MtrunA17_Chr6g0480771 38.492 252 132 6 420 658 12 253 1.17e-39 148
Msa1370530 MtrunA17_Chr5g0395411 36.744 215 114 5 99 312 172 365 1.33e-36 141
Msa1370530 MtrunA17_Chr6g0480841 40.909 198 97 5 474 658 2 192 3.61e-33 127
Msa1370530 MtrunA17_Chr2g0326851 50.382 131 60 4 599 726 3 131 1.20e-30 117
Msa1370530 MtrunA17_Chr6g0480751 32.710 214 126 4 4 216 19 215 7.10e-26 106
Msa1370530 MtrunA17_Chr6g0480791 40.164 122 72 1 99 219 172 293 3.31e-23 100
Msa1370530 MtrunA17_Chr6g0480821 32.919 161 97 6 227 384 37 189 1.09e-17 82.8
Msa1370530 MtrunA17_Chr2g0318551 33.533 167 92 6 97 259 61 212 4.04e-16 78.2
Msa1370530 MtrunA17_Chr3g0138671 22.200 491 291 16 91 577 39 442 9.29e-16 81.3
Msa1370530 MtrunA17_Chr8g0356081 19.533 471 280 11 99 560 40 420 1.64e-15 80.5
Msa1370530 MtrunA17_Chr6g0480761 31.847 157 95 5 233 384 16 165 2.57e-15 75.5
Msa1370530 MtrunA17_Chr4g0063141 25.728 206 150 2 373 577 238 441 7.61e-15 78.6
Msa1370530 MtrunA17_Chr5g0434371 21.385 491 303 16 67 554 49 459 4.06e-14 76.3
Msa1370530 MtrunA17_Chr2g0277651 24.044 183 138 1 374 556 262 443 1.05e-12 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370530 AT5G57940.1 77.500 720 156 4 12 728 1 717 0.0 1142
Msa1370530 AT5G57940.2 77.500 720 156 4 12 728 1 717 0.0 1142
Msa1370530 AT5G57940.3 76.944 720 153 5 12 728 1 710 0.0 1129
Msa1370530 AT2G23980.9 73.592 746 180 7 1 729 1 746 0.0 1117
Msa1370530 AT2G23980.10 73.592 746 180 7 1 729 1 746 0.0 1117
Msa1370530 AT2G23980.1 73.592 746 180 7 1 729 1 746 0.0 1117
Msa1370530 AT2G23980.4 73.592 746 180 7 1 729 1 746 0.0 1117
Msa1370530 AT2G23980.5 73.592 746 180 7 1 729 1 746 0.0 1117
Msa1370530 AT2G23980.3 71.391 769 180 8 1 729 1 769 0.0 1103
Msa1370530 AT2G23980.2 71.391 769 180 8 1 729 1 769 0.0 1103
Msa1370530 AT2G23980.8 71.391 769 180 8 1 729 1 769 0.0 1103
Msa1370530 AT2G23980.7 71.391 769 180 8 1 729 1 769 0.0 1103
Msa1370530 AT2G23980.6 74.687 719 168 6 25 729 1 719 0.0 1102
Msa1370530 AT4G30560.1 73.352 728 182 5 8 729 10 731 0.0 1099
Msa1370530 AT4G30560.4 73.352 728 182 5 8 729 10 731 0.0 1099
Msa1370530 AT4G30560.5 74.121 711 172 5 25 729 1 705 0.0 1088
Msa1370530 AT4G30560.2 74.121 711 172 5 25 729 1 705 0.0 1088
Msa1370530 AT4G30560.3 74.121 711 172 5 25 729 1 705 0.0 1088
Msa1370530 AT1G19780.1 67.467 750 218 5 7 731 2 750 0.0 1021
Msa1370530 AT1G15990.1 67.160 743 217 9 7 728 2 738 0.0 1002
Msa1370530 AT5G53130.1 56.579 684 280 6 55 729 41 716 0.0 790
Msa1370530 AT1G01340.2 55.733 689 271 9 66 728 26 706 0.0 785
Msa1370530 AT1G01340.1 55.733 689 271 9 66 728 21 701 0.0 784
Msa1370530 AT4G01010.1 55.694 641 265 5 94 726 63 692 0.0 750
Msa1370530 AT4G01010.2 55.694 641 265 5 94 726 63 692 0.0 750
Msa1370530 AT1G19780.2 68.831 539 145 4 215 731 2 539 0.0 750
Msa1370530 AT2G28260.1 53.275 687 287 11 49 728 19 678 0.0 726
Msa1370530 AT2G28260.2 54.476 659 269 9 76 728 5 638 0.0 724
Msa1370530 AT2G24610.1 53.333 675 275 8 87 729 60 726 0.0 716
Msa1370530 AT2G24610.2 53.333 675 275 8 87 729 75 741 0.0 714
Msa1370530 AT4G30360.1 53.625 662 270 10 97 731 69 720 0.0 712
Msa1370530 AT2G46430.1 50.218 689 319 9 55 730 29 706 0.0 709
Msa1370530 AT2G46430.2 50.218 689 319 9 55 730 29 706 0.0 709
Msa1370530 AT5G14870.1 50.075 671 294 8 98 731 39 705 0.0 683
Msa1370530 AT3G48010.1 50.075 665 292 10 98 725 43 704 0.0 675
Msa1370530 AT2G46440.1 46.766 603 304 9 97 691 28 621 0.0 538
Msa1370530 AT2G46450.4 42.812 626 327 10 110 728 40 641 3.30e-174 514
Msa1370530 AT2G46450.1 42.812 626 327 10 110 728 40 641 3.30e-174 514
Msa1370530 AT2G46450.3 41.534 626 312 11 110 728 27 605 4.56e-164 487
Msa1370530 AT2G46450.2 41.315 639 320 12 97 728 28 618 9.88e-164 486
Msa1370530 AT2G46440.2 49.777 448 212 7 252 691 1 443 5.16e-143 426
Msa1370530 AT3G17690.1 38.185 584 322 14 99 664 158 720 2.45e-126 393
Msa1370530 AT3G17700.1 38.986 572 314 14 99 653 192 745 3.32e-119 375
Msa1370530 AT5G54250.2 37.069 580 332 13 98 656 78 645 1.48e-115 364
Msa1370530 AT5G54250.1 37.069 580 332 13 98 656 78 645 1.48e-115 364
Msa1370530 AT5G54250.4 37.069 580 332 13 98 656 78 645 1.48e-115 364
Msa1370530 AT5G15410.1 37.955 577 338 9 92 653 106 677 9.16e-115 363
Msa1370530 AT5G15410.2 37.955 577 338 9 92 653 105 676 9.52e-115 363
Msa1370530 AT3G17690.2 38.586 495 275 10 99 584 158 632 6.87e-113 355
Msa1370530 AT5G54250.3 36.379 580 331 14 98 656 78 640 7.51e-110 349
Msa1370530 AT3G17700.2 39.157 498 280 11 99 591 192 671 2.96e-107 342
Msa1370530 AT3G17690.3 36.031 383 223 8 88 461 147 516 9.92e-75 251
Msa1370530 AT3G02850.2 21.368 468 286 15 94 558 69 457 5.48e-17 85.9
Msa1370530 AT3G02850.1 21.627 467 286 14 94 558 69 457 7.01e-17 85.5
Msa1370530 AT3G02850.3 21.368 468 286 15 94 558 69 457 1.12e-16 84.7
Msa1370530 AT2G26650.1 19.672 488 288 10 99 577 49 441 3.19e-16 83.6
Msa1370530 AT5G37500.1 21.692 461 281 14 97 556 55 436 1.03e-14 78.6
Msa1370530 AT5G37500.2 21.692 461 281 14 97 556 55 436 1.16e-14 78.6
Msa1370530 AT5G37500.4 21.475 461 282 14 97 556 55 436 1.59e-14 77.8
Msa1370530 AT5G37500.3 22.103 466 273 16 95 556 3 382 5.27e-13 73.2
Msa1370530 AT4G22200.2 22.995 187 143 1 374 560 263 448 1.85e-12 71.2
Msa1370530 AT4G22200.1 22.995 187 143 1 374 560 263 448 3.94e-12 70.5
Msa1370530 AT5G46240.1 22.000 200 155 1 373 572 245 443 1.21e-11 68.6
Msa1370530 AT2G26650.2 20.250 400 232 8 187 577 15 336 2.05e-11 68.2
Msa1370530 AT4G32650.2 23.913 184 139 1 375 558 276 458 6.22e-11 66.2
Msa1370530 AT4G32650.3 23.913 184 139 1 375 558 276 458 7.30e-11 66.2
Msa1370530 AT4G32650.1 23.913 184 139 1 375 558 276 458 7.43e-11 66.2

Find 190 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATATCTTTACTGTTTA+TGG 0.022733 tig0019129:-123939 Msa1370530:CDS
CAATTGTAATATTGAAATTA+TGG 0.130935 tig0019129:-121120 Msa1370530:three_prime_UTR
GCTCCATCATCTCGTGTCTT+TGG 0.178515 tig0019129:-125556 Msa1370530:CDS
ACACGCTCTCTAAGCTCTTT+TGG 0.222016 tig0019129:+122637 None:intergenic
CTCTTAAGTTCTGAAGTTAA+TGG 0.232977 tig0019129:+124465 None:intergenic
ATTATGGGTTGGAAGAATTA+AGG 0.233547 tig0019129:-121104 Msa1370530:three_prime_UTR
GCCTAACTGGCTGTCATATT+AGG 0.256859 tig0019129:-121176 Msa1370530:three_prime_UTR
CTCCATCATCTCGTGTCTTT+GGG 0.266985 tig0019129:-125555 Msa1370530:CDS
TCTGAAGGACTGAAATTAAT+TGG 0.268732 tig0019129:-125877 Msa1370530:CDS
TCAGACACTTTAAGATCTTC+TGG 0.270701 tig0019129:+125817 None:intergenic
CAATGTAAGCCGTGCGAAAT+TGG 0.274977 tig0019129:+125578 None:intergenic
GATGTCAGAGTTACAAAATC+TGG 0.296654 tig0019129:-125982 Msa1370530:CDS
TATGACTGAACTTGTGAAAA+AGG 0.303288 tig0019129:-121248 Msa1370530:three_prime_UTR
GGTTCCACTATTTGAGAGTA+TGG 0.306379 tig0019129:-121983 Msa1370530:CDS
TCAATAGCACTTGCCATATC+AGG 0.329052 tig0019129:-123314 Msa1370530:CDS
GGCAAACTTTGAGGCTAATA+AGG 0.330312 tig0019129:+121429 None:intergenic
ATCCTCTTCGCGCTTCTGAT+TGG 0.344987 tig0019129:-123287 Msa1370530:CDS
CAGAGAATACTTATATTGTT+CGG 0.346563 tig0019129:-121909 Msa1370530:CDS
CAATGATGAATTACACTGTC+TGG 0.350794 tig0019129:-125680 Msa1370530:CDS
AGCACCCGCCCATGCAGTTT+CGG 0.362208 tig0019129:+124425 None:intergenic
AAATTAATTACCTTAAATTC+TGG 0.365686 tig0019129:+123908 None:intergenic
TTTCAGCTCATCGGCGGTTA+AGG 0.369784 tig0019129:+121666 None:intergenic
TAGTATACATTAAGCCTAAC+TGG 0.380548 tig0019129:-121189 Msa1370530:three_prime_UTR
ACTGATTATTTGCAGATAGT+TGG 0.381899 tig0019129:-124213 Msa1370530:intron
AATTGTAATATTGAAATTAT+GGG 0.384376 tig0019129:-121119 Msa1370530:three_prime_UTR
GATCCTTCCTCCTTGTTGTT+CGG 0.392824 tig0019129:-127434 Msa1370530:five_prime_UTR
CACCAACTCCCTGGCAGTCT+TGG 0.398928 tig0019129:+121369 None:intergenic
TGACTATTATTGCCAACTTT+CGG 0.399473 tig0019129:+125650 None:intergenic
ATCTTTACTGTTTATGGTGG+GGG 0.405257 tig0019129:-123933 Msa1370530:CDS
ATCATCTCGTGTCTTTGGGC+GGG 0.405515 tig0019129:-125551 Msa1370530:CDS
CTTGTAATCAGATTGTTGTT+TGG 0.406927 tig0019129:-124590 Msa1370530:intron
TCACTGCAGTACCCTTGGTC+AGG 0.408201 tig0019129:-123375 Msa1370530:intron
ATATCTCTTCGAAGATCCTT+TGG 0.408228 tig0019129:+122544 None:intergenic
TATTAAGCGTCATCTCTGTT+TGG 0.412230 tig0019129:-122524 Msa1370530:CDS
CTCTCATTTCCTCCAGCCTA+AGG 0.417185 tig0019129:+122704 None:intergenic
ATGAAAAGCATCTCATCAAC+TGG 0.418687 tig0019129:+121877 None:intergenic
TTTAAGCAAGCCTTGTCATC+TGG 0.423538 tig0019129:-123988 Msa1370530:CDS
TGGAAGATTAGAACCAGATC+TGG 0.424177 tig0019129:+121735 None:intergenic
GGTACCATTCGAAGAAATCT+AGG 0.424271 tig0019129:+124486 None:intergenic
TAGAACCAGATCTGGGGTCC+AGG 0.433905 tig0019129:+121743 None:intergenic
ATCGACTCGCCAAGACTGCC+AGG 0.437488 tig0019129:-121378 Msa1370530:CDS
AGAGAATACTTATATTGTTC+GGG 0.441039 tig0019129:-121908 Msa1370530:CDS
ATCTGTGTTGCCAGTACCAC+AGG 0.445249 tig0019129:-125458 Msa1370530:intron
CACTATAACCTTCCGTGTGC+TGG 0.445320 tig0019129:+124091 None:intergenic
TGGGCCCTGGACCCCAGATC+TGG 0.448919 tig0019129:-121748 Msa1370530:CDS
ACCTAATATGACAGCCAGTT+AGG 0.451204 tig0019129:+121175 None:intergenic
CGCCCAAAGACACGAGATGA+TGG 0.455061 tig0019129:+125553 None:intergenic
GTGTCTTTGCCGAAACTGCA+TGG 0.456842 tig0019129:-124434 Msa1370530:CDS
TTTCAACCGCACATATCTAA+AGG 0.457653 tig0019129:-121803 Msa1370530:CDS
TCAGTCCCTTACCCTTAGGC+TGG 0.460097 tig0019129:-122716 Msa1370530:CDS
TAATAAGGCGGCACCAAGGC+TGG 0.460595 tig0019129:+121444 None:intergenic
GAAGAGGATGAGACCTGATA+TGG 0.460796 tig0019129:+123301 None:intergenic
TGCTTTCTATTTGCTAAACA+TGG 0.461201 tig0019129:-125605 Msa1370530:CDS
AAATTAATTGGTCGATCACT+TGG 0.464219 tig0019129:-125865 Msa1370530:CDS
AACGGCAGTTCCTCCAGCCT+TGG 0.469815 tig0019129:-121457 Msa1370530:CDS
TTTCCTCCAGCCTAAGGGTA+AGG 0.471966 tig0019129:+122710 None:intergenic
TCATCCATACTCTCAAATAG+TGG 0.476542 tig0019129:+121979 None:intergenic
TCTGCTGTAAAGTCAGGCTC+AGG 0.479099 tig0019129:+121331 None:intergenic
ACTCTCAACAATGGAGAACC+TGG 0.480377 tig0019129:-121582 Msa1370530:CDS
CATCATCTCGTGTCTTTGGG+CGG 0.483109 tig0019129:-125552 Msa1370530:CDS
TCATCTCGTGTCTTTGGGCG+GGG 0.485159 tig0019129:-125550 Msa1370530:CDS
TGGTTTCAGTCTCTCACATA+TGG 0.485163 tig0019129:+121942 None:intergenic
TTACTTCACTGCAGTACCCT+TGG 0.485316 tig0019129:-123380 Msa1370530:intron
CTGTTTGGCTTTAGTGAGGA+GGG 0.485661 tig0019129:-122509 Msa1370530:intron
CGCCAAGACTGCCAGGGAGT+TGG 0.489302 tig0019129:-121371 Msa1370530:CDS
AATTGGTCGATCACTTGGAC+TGG 0.493849 tig0019129:-125860 Msa1370530:CDS
ATATCTTTACTGTTTATGGT+GGG 0.494622 tig0019129:-123935 Msa1370530:CDS
TTGGTCGATCACTTGGACTG+GGG 0.495877 tig0019129:-125858 Msa1370530:CDS
GGGCGAGCTTGTGATAGATT+CGG 0.504640 tig0019129:-125530 Msa1370530:CDS
TAGCAAATAGAAAGCATCAA+TGG 0.505414 tig0019129:+125612 None:intergenic
GCATCATCTGCTGTAAAGTC+AGG 0.505947 tig0019129:+121325 None:intergenic
ACACGGAAGGTTATAGTGCC+TGG 0.506802 tig0019129:-124086 Msa1370530:CDS
TTCAAACTAGCACATATCCT+GGG 0.507377 tig0019129:-123349 Msa1370530:CDS
TCAGAACTTAAGAGAACAGC+TGG 0.509746 tig0019129:-124456 Msa1370530:CDS
CTTCAAACTAGCACATATCC+TGG 0.511018 tig0019129:-123350 Msa1370530:CDS
TATCTTTACTGTTTATGGTG+GGG 0.514479 tig0019129:-123934 Msa1370530:CDS
AATATCTTTACTGTTTATGG+TGG 0.516798 tig0019129:-123936 Msa1370530:CDS
TAGACGTCTTCACAGTAGAC+AGG 0.517455 tig0019129:-121626 Msa1370530:CDS
TTGAATAAAACAAGCAGCCC+AGG 0.520184 tig0019129:+121564 None:intergenic
GGAAGATTAGAACCAGATCT+GGG 0.521641 tig0019129:+121736 None:intergenic
GTAATATTGAAATTATGGGT+TGG 0.523418 tig0019129:-121115 Msa1370530:three_prime_UTR
ATCTTCAGTCCCTTACCCTT+AGG 0.524427 tig0019129:-122720 Msa1370530:CDS
TAAAGGAGGCTGAGTTCTGT+GGG 0.524904 tig0019129:-121786 Msa1370530:CDS
ATTGGTCGATCACTTGGACT+GGG 0.525084 tig0019129:-125859 Msa1370530:CDS
AAATTAAACCATGGTAGTCA+TGG 0.526709 tig0019129:-125946 Msa1370530:CDS
CACTGCAGTACCCTTGGTCA+GGG 0.528148 tig0019129:-123374 Msa1370530:intron
TCTGTTTGGCTTTAGTGAGG+AGG 0.529031 tig0019129:-122510 Msa1370530:CDS
AGTGCGCGCGGCAAACTTTG+AGG 0.530370 tig0019129:+121420 None:intergenic
CTAATCTTCCAACCTCTACT+CGG 0.532003 tig0019129:-121723 Msa1370530:CDS
CTTTGCCGAAACTGCATGGG+CGG 0.533622 tig0019129:-124430 Msa1370530:CDS
GGAATGAGAAAGGGATCTGA+AGG 0.534084 tig0019129:-125892 Msa1370530:CDS
AGAATGCTTGCCGTGACAAT+GGG 0.537644 tig0019129:-124143 Msa1370530:CDS
ACAGTTTCTCTCTCTCTATG+AGG 0.539148 tig0019129:-127323 Msa1370530:intron
TTGTAATTTCACCAACTCCC+TGG 0.539371 tig0019129:+121360 None:intergenic
CAGAATGCTTGCCGTGACAA+TGG 0.542017 tig0019129:-124144 Msa1370530:CDS
TTGTTTGGAGATTTCTTCAG+AGG 0.547801 tig0019129:-124575 Msa1370530:CDS
TTCCTCCAGCCTAAGGGTAA+GGG 0.548812 tig0019129:+122711 None:intergenic
TGTCTTTGCCGAAACTGCAT+GGG 0.548973 tig0019129:-124433 Msa1370530:CDS
TTCAATATTACAATTGACAA+CGG 0.549917 tig0019129:+121127 None:intergenic
AATTATGAAGCTTCGTCAGA+AGG 0.551043 tig0019129:-121512 Msa1370530:CDS
ATCTCTGTTTGGCTTTAGTG+AGG 0.554542 tig0019129:-122513 Msa1370530:CDS
ACCACAGATGGTGGGAGGAG+TGG 0.554774 tig0019129:-121829 Msa1370530:CDS
TGATTACAAATCACAGTACA+TGG 0.555003 tig0019129:-126319 Msa1370530:CDS
ATGGAAGCAGCACAACCTCT+AGG 0.556003 tig0019129:-125927 Msa1370530:CDS
TGTAATTCATCATTGATGAC+AGG 0.556688 tig0019129:+125688 None:intergenic
GCTTCTGATTGGCAACATGC+AGG 0.559066 tig0019129:-123276 Msa1370530:intron
GTCCCTTACCCTTAGGCTGG+AGG 0.561500 tig0019129:-122713 Msa1370530:CDS
GGCAACAAATTTCAGCTCAT+CGG 0.562924 tig0019129:+121657 None:intergenic
AATGATGAATTACACTGTCT+GGG 0.563593 tig0019129:-125679 Msa1370530:CDS
ACCTAAAAGAACTTTCTCGC+TGG 0.565973 tig0019129:+126292 None:intergenic
CTGCTGTAAAGTCAGGCTCA+GGG 0.566862 tig0019129:+121332 None:intergenic
AGCATCAATGGCTGTCCTCA+AGG 0.567403 tig0019129:+125624 None:intergenic
CTTGAGAGTGTTACCACAGA+TGG 0.567620 tig0019129:-121841 Msa1370530:CDS
GTGGTACTGGCAACACAGAT+AGG 0.568795 tig0019129:+125461 None:intergenic
TTCACAGTCCGAGTAGAGGT+TGG 0.569798 tig0019129:+121715 None:intergenic
CGCCTTCACAGTCCGAGTAG+AGG 0.572148 tig0019129:+121711 None:intergenic
TTGAACGCAATGACTCATGC+TGG 0.573357 tig0019129:-124167 Msa1370530:CDS
AACAAATTTCAGCTCATCGG+CGG 0.575197 tig0019129:+121660 None:intergenic
TATTCCTAGATTTCTTCGAA+TGG 0.576328 tig0019129:-124490 Msa1370530:CDS
TGGAGGAAATGAGAGTCAAA+AGG 0.578064 tig0019129:-122696 Msa1370530:CDS
ATTGAAAAGATAACCTCCCC+AGG 0.578411 tig0019129:+123332 None:intergenic
CTAAAGGAGGCTGAGTTCTG+TGG 0.580756 tig0019129:-121787 Msa1370530:CDS
AATACTTATATTGTTCGGGA+AGG 0.582365 tig0019129:-121904 Msa1370530:CDS
TTTGCCGAAACTGCATGGGC+GGG 0.583820 tig0019129:-124429 Msa1370530:CDS
AGTTTGAAGCCCCTGACCAA+GGG 0.585386 tig0019129:+123364 None:intergenic
GTCAAACATCTTTCAACAGT+AGG 0.587623 tig0019129:+126347 None:intergenic
ATTCCATAATCAAAAGGTGG+AGG 0.588062 tig0019129:+124012 None:intergenic
ACCACTCCTCCCACCATCTG+TGG 0.589869 tig0019129:+121828 None:intergenic
GTATGATCAATATAAGTGGT+TGG 0.589892 tig0019129:-122608 Msa1370530:CDS
AGAACCAGATCTGGGGTCCA+GGG 0.590157 tig0019129:+121744 None:intergenic
TCTCATTTCCTCCAGCCTAA+GGG 0.590500 tig0019129:+122705 None:intergenic
TGGTCGATCACTTGGACTGG+GGG 0.590891 tig0019129:-125857 Msa1370530:CDS
CATGGCTCTCCAATTTCGCA+CGG 0.593225 tig0019129:-125587 Msa1370530:CDS
GAGAGTGTTACCACAGATGG+TGG 0.593359 tig0019129:-121838 Msa1370530:CDS
TATAATACAATTATTTACAA+AGG 0.594456 tig0019129:+121210 None:intergenic
GGCGGTATGATCAATATAAG+TGG 0.596596 tig0019129:-122612 Msa1370530:CDS
GTGAAGACGTCTAAACTGAC+TGG 0.596611 tig0019129:+121636 None:intergenic
AAGAGCTTAGAGAGCGTGTG+AGG 0.598434 tig0019129:-122633 Msa1370530:CDS
GTATTCTCTGTAAATAAACA+TGG 0.598980 tig0019129:+121922 None:intergenic
TAGTTTGAAGCCCCTGACCA+AGG 0.599761 tig0019129:+123363 None:intergenic
TTTAGTTCAGAGTCTACCAA+AGG 0.600713 tig0019129:-122560 Msa1370530:CDS
ACGGTAAATAAGTTACATGC+TGG 0.600732 tig0019129:+121146 None:intergenic
TACAAATCACAGTACATGGA+TGG 0.601736 tig0019129:-126315 Msa1370530:CDS
ACTGCAGTACCCTTGGTCAG+GGG 0.604670 tig0019129:-123373 Msa1370530:intron
CAGTCTTGGCGAGTCGATTG+CGG 0.604942 tig0019129:+121383 None:intergenic
GCACCGAACAACAAGGAGGA+AGG 0.608922 tig0019129:+127431 None:intergenic
GCTGTAAAGTCAGGCTCAGG+GGG 0.609315 tig0019129:+121334 None:intergenic
TCAGAAGGAAGTCACGGCAA+CGG 0.612473 tig0019129:-121475 Msa1370530:CDS
TGCTGCTTCCATGACTACCA+TGG 0.616363 tig0019129:+125938 None:intergenic
AAAATTCCATAATCAAAAGG+TGG 0.620323 tig0019129:+124009 None:intergenic
TCTGGGTATAGACCGAAAGT+TGG 0.620416 tig0019129:-125662 Msa1370530:CDS
TGTGAGAACCAGCACACGGA+AGG 0.621184 tig0019129:-124099 Msa1370530:CDS
AGCTTAGAGAGCGTGTGAGG+CGG 0.621829 tig0019129:-122630 Msa1370530:CDS
CAGCCTCCTTTAGATATGTG+CGG 0.623629 tig0019129:+121797 None:intergenic
AGTATTGATAAATTAAACCA+TGG 0.625061 tig0019129:-125955 Msa1370530:CDS
TGATGTACTAGCAACAAAGC+AGG 0.625485 tig0019129:-124541 Msa1370530:CDS
TGCTGTAAAGTCAGGCTCAG+GGG 0.626056 tig0019129:+121333 None:intergenic
GAAGAAGCGGATGAGTCAGA+AGG 0.626874 tig0019129:-121490 Msa1370530:CDS
AACCTCTACTCGGACTGTGA+AGG 0.629479 tig0019129:-121713 Msa1370530:CDS
GTAAATAAGTTACATGCTGG+TGG 0.631706 tig0019129:+121149 None:intergenic
CTCTCAACAATGGAGAACCT+GGG 0.633749 tig0019129:-121581 Msa1370530:CDS
CAACCGCACATATCTAAAGG+AGG 0.635378 tig0019129:-121800 Msa1370530:CDS
GCTTCGTCAGAAGGAAGAAG+CGG 0.637094 tig0019129:-121503 Msa1370530:CDS
AAAGGCGTGATTCAGAACAA+TGG 0.640001 tig0019129:-122678 Msa1370530:CDS
TGAAATGATACCAGATGACA+AGG 0.640327 tig0019129:+123978 None:intergenic
GATGAGTCAGAAGGAAGTCA+CGG 0.642746 tig0019129:-121481 Msa1370530:CDS
TCGACTCGCCAAGACTGCCA+GGG 0.646113 tig0019129:-121377 Msa1370530:CDS
CAATAATAGTCACCACCTTG+AGG 0.647111 tig0019129:-125639 Msa1370530:CDS
TATAAGTGGTTGGCAACACG+TGG 0.647524 tig0019129:-122598 Msa1370530:CDS
TGCCAATCAGAAGCGCGAAG+AGG 0.647772 tig0019129:+123285 None:intergenic
GGAGGCTGAGTTCTGTGGGG+AGG 0.650785 tig0019129:-121782 Msa1370530:CDS
AAACTTTGAGGCTAATAAGG+CGG 0.650978 tig0019129:+121432 None:intergenic
TACACCACGGAGAGTGCGCG+CGG 0.651777 tig0019129:+121408 None:intergenic
ACTGTGATTTGTAATCACTT+CGG 0.652558 tig0019129:+126325 None:intergenic
AACTAGCACATATCCTGGGG+AGG 0.659235 tig0019129:-123345 Msa1370530:CDS
AAACTCTGCACCGAACAACA+AGG 0.661797 tig0019129:+127424 None:intergenic
GACTGTGAAGGCGTTAACAG+AGG 0.662573 tig0019129:-121701 Msa1370530:CDS
AGGCTAATAAGGCGGCACCA+AGG 0.669575 tig0019129:+121440 None:intergenic
AGAGTGTTACCACAGATGGT+GGG 0.670648 tig0019129:-121837 Msa1370530:CDS
AAGCAAGATAATGAACAGCA+AGG 0.671349 tig0019129:+124518 None:intergenic
GTCGATTGCGGTGTACACCA+CGG 0.672348 tig0019129:+121395 None:intergenic
GTGTTACCACAGATGGTGGG+AGG 0.679578 tig0019129:-121834 Msa1370530:CDS
ATCAATGGCTGTCCTCAAGG+TGG 0.685135 tig0019129:+125627 None:intergenic
AAACAGTGGATCCACAAACA+CGG 0.686841 tig0019129:+125720 None:intergenic
TCAAACTAGCACATATCCTG+GGG 0.691393 tig0019129:-123348 Msa1370530:CDS
GTATTGTGAGAACCAGCACA+CGG 0.712309 tig0019129:-124103 Msa1370530:CDS
GAAGATTAGAACCAGATCTG+GGG 0.716370 tig0019129:+121737 None:intergenic
TGAAAGTGAAGTTGAAGTTG+CGG 0.721956 tig0019129:+127346 None:intergenic
CTCTGCACCGAACAACAAGG+AGG 0.732981 tig0019129:+127427 None:intergenic
AAAGGAGGCTGAGTTCTGTG+GGG 0.741818 tig0019129:-121785 Msa1370530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAAAGCAATTAAAT+TGG + tig0019129:121261-121280 None:intergenic 10.0%
!!! TTTAATTGCTTTAATTTTAA+TGG - tig0019129:121262-121281 Msa1370530:three_prime_UTR 10.0%
!! ATAACAAAAACAAAAAAAAA+TGG + tig0019129:121408-121427 None:intergenic 10.0%
!!! TGTATGTATATTTTTATTTT+TGG - tig0019129:121509-121528 Msa1370530:CDS 10.0%
!!! TTTTTCATTTTTTTTTTTCT+AGG - tig0019129:122497-122516 Msa1370530:intron 10.0%
!!! GTTTTTTTTTTTTTTTTTTG+GGG - tig0019129:123283-123302 Msa1370530:CDS 10.0%
!!! TTTTTTTTTTTTTTTTTTGG+GGG - tig0019129:123284-123303 Msa1370530:CDS 10.0%
!!! TCTTATAAATTTTTCTAATA+TGG - tig0019129:123504-123523 Msa1370530:intron 10.0%
!! TATAATACAATTATTTACAA+AGG + tig0019129:127331-127350 None:intergenic 10.0%
!! AATTGTAATATTGAAATTAT+GGG - tig0019129:127419-127438 Msa1370530:five_prime_UTR 10.0%
!! TAAATTATTTCATGATCATA+AGG - tig0019129:121477-121496 Msa1370530:CDS 15.0%
!! ATAGTAGATTTATTTACATA+TGG - tig0019129:121940-121959 Msa1370530:CDS 15.0%
!! TAGTAGATTTATTTACATAT+GGG - tig0019129:121941-121960 Msa1370530:CDS 15.0%
!!! TTTTTTTTTTTTTTTTTGGG+GGG - tig0019129:123285-123304 Msa1370530:CDS 15.0%
!! AAAATTATTGAGCTAAAAAT+AGG + tig0019129:123588-123607 None:intergenic 15.0%
!! AGAATATAAAAAGAAAACAA+AGG + tig0019129:123930-123949 None:intergenic 15.0%
!! TTAAAAATTCCATAATCAAA+AGG + tig0019129:124535-124554 None:intergenic 15.0%
!! AAATTAATTACCTTAAATTC+TGG + tig0019129:124633-124652 None:intergenic 15.0%
!! TAAGAAATATGATAAAATAG+AGG - tig0019129:125347-125366 Msa1370530:intron 15.0%
!! ATATATTATAAATGTTACTG+AGG - tig0019129:125768-125787 Msa1370530:CDS 15.0%
!!! TTTTCTACTGTAAAAATATT+TGG + tig0019129:126147-126166 None:intergenic 15.0%
!!! AATTCATTAACTTATTTTCA+TGG - tig0019129:126525-126544 Msa1370530:intron 15.0%
!! CAATTGTAATATTGAAATTA+TGG - tig0019129:127418-127437 Msa1370530:five_prime_UTR 15.0%
!!! TTTTTTTGTGATTTGAGATT+AGG - tig0019129:121082-121101 Msa1370530:three_prime_UTR 20.0%
!! ATGGTTTAGATGATTAATAT+TGG - tig0019129:121586-121605 Msa1370530:CDS 20.0%
!!! ATCACAGCATTTTTTTTTTT+GGG + tig0019129:121847-121866 None:intergenic 20.0%
!! AATAAATCTACTATATAACG+TGG + tig0019129:121934-121953 None:intergenic 20.0%
!! GAATAATTTAAAGAATGACA+TGG + tig0019129:122016-122035 None:intergenic 20.0%
!! TGCAATACTATAAATATTGT+TGG - tig0019129:122119-122138 Msa1370530:intron 20.0%
!!! TTCATTTTTTTTTTTCTAGG+TGG - tig0019129:122500-122519 Msa1370530:intron 20.0%
!!! TCATTTTTTTTTTTCTAGGT+GGG - tig0019129:122501-122520 Msa1370530:intron 20.0%
!!! AGTATTGATAAATTAAACCA+TGG - tig0019129:122583-122602 Msa1370530:CDS 20.0%
!!! TTTTAAAAAAGGAATGAGAA+AGG - tig0019129:122636-122655 Msa1370530:CDS 20.0%
!! TTTAAAAAAGGAATGAGAAA+GGG - tig0019129:122637-122656 Msa1370530:CDS 20.0%
!! TAAGAGTAAAAATTTGTCTT+GGG + tig0019129:122764-122783 None:intergenic 20.0%
!! ATAAGAGTAAAAATTTGTCT+TGG + tig0019129:122765-122784 None:intergenic 20.0%
!!! AAGACAAATTTTTACTCTTA+TGG - tig0019129:122764-122783 Msa1370530:intron 20.0%
!!! TTTTTTTTTTTTTTTTGGGG+GGG - tig0019129:123286-123305 Msa1370530:CDS 20.0%
!! AAGAATAAGTGCAATAAAAT+TGG - tig0019129:123364-123383 Msa1370530:CDS 20.0%
!!! TGATTTGAAACTATTGAAAT+TGG - tig0019129:123475-123494 Msa1370530:intron 20.0%
!!! GATTTGAAACTATTGAAATT+GGG - tig0019129:123476-123495 Msa1370530:intron 20.0%
!!! ATTTGAAACTATTGAAATTG+GGG - tig0019129:123477-123496 Msa1370530:intron 20.0%
!!! TTAGTATAAATGATGCTTTT+TGG - tig0019129:123636-123655 Msa1370530:intron 20.0%
!!! TAGTATAAATGATGCTTTTT+GGG - tig0019129:123637-123656 Msa1370530:intron 20.0%
!!! AAGTAAGAAAGAAGTATTTT+TGG + tig0019129:123812-123831 None:intergenic 20.0%
!! TTAAAATTACAGTAGCAATA+AGG + tig0019129:123882-123901 None:intergenic 20.0%
!!! TTATTGCTACTGTAATTTTA+AGG - tig0019129:123881-123900 Msa1370530:intron 20.0%
!!! ATATTTTGTGATGAATTTCT+TGG + tig0019129:124587-124606 None:intergenic 20.0%
!! CAAAATATCTTTACTGTTTA+TGG - tig0019129:124599-124618 Msa1370530:intron 20.0%
!! TATTTAATAGACCATATCAA+TGG - tig0019129:124887-124906 Msa1370530:intron 20.0%
!! ACAAATAATCAATGAAATCA+CGG + tig0019129:125118-125137 None:intergenic 20.0%
!! AAATATAGCAATTGTGAATA+TGG + tig0019129:125412-125431 None:intergenic 20.0%
!! TAGAGATATCATGTATAAAT+AGG + tig0019129:125462-125481 None:intergenic 20.0%
!!! ATATTTAAGTTTCTGTGTTA+TGG - tig0019129:125624-125643 Msa1370530:CDS 20.0%
!! AAAAATATTTGGTCCTTTAT+CGG + tig0019129:126136-126155 None:intergenic 20.0%
!!! TTTGCTTTTCAAATTCTTTT+TGG - tig0019129:126337-126356 Msa1370530:exon 20.0%
!! TTCAATATTACAATTGACAA+CGG + tig0019129:127414-127433 None:intergenic 20.0%
!!! ATTAAGGTTGATTTTATTTG+TGG - tig0019129:127450-127469 Msa1370530:five_prime_UTR 20.0%
!!! TCACAGCATTTTTTTTTTTG+GGG + tig0019129:121846-121865 None:intergenic 25.0%
!!! CATCACAGCATTTTTTTTTT+TGG + tig0019129:121848-121867 None:intergenic 25.0%
! CAAAAAAAAAAATGCTGTGA+TGG - tig0019129:121846-121865 Msa1370530:CDS 25.0%
! AGTAATAAACTAGCAACTTT+AGG - tig0019129:121885-121904 Msa1370530:CDS 25.0%
!!! CAACTTTAGGTTCATTTTTA+TGG - tig0019129:121898-121917 Msa1370530:CDS 25.0%
!!! AATGTTTACTAAAAGCATCA+TGG + tig0019129:122079-122098 None:intergenic 25.0%
!! TGATGCTTTTAGTAAACATT+CGG - tig0019129:122079-122098 Msa1370530:intron 25.0%
! TTATAGTATTGCATTCTTCA+TGG + tig0019129:122112-122131 None:intergenic 25.0%
! ACATTGCAACGAAAATATAT+TGG + tig0019129:122274-122293 None:intergenic 25.0%
! TAATATTCCTGTTTATGAAC+CGG - tig0019129:122435-122454 Msa1370530:intron 25.0%
! AAGAGTAAAAATTTGTCTTG+GGG + tig0019129:122763-122782 None:intergenic 25.0%
! AATCGTACAGTATTTACAAA+AGG + tig0019129:123137-123156 None:intergenic 25.0%
!!! CTGTACGATTATTTTTTCTT+CGG - tig0019129:123147-123166 Msa1370530:intron 25.0%
!!! TTTTTTTTTTTTTTTGGGGG+GGG - tig0019129:123287-123306 Msa1370530:CDS 25.0%
! GGAGAATATAATATCATACT+TGG - tig0019129:123385-123404 Msa1370530:intron 25.0%
! AGTTTCAAATCAAAGAAAAC+AGG + tig0019129:123467-123486 None:intergenic 25.0%
! TAAAAAGAAAACAAAGGCAA+GGG + tig0019129:123924-123943 None:intergenic 25.0%
! ATAAAAAGAAAACAAAGGCA+AGG + tig0019129:123925-123944 None:intergenic 25.0%
! AAAAAAAACACTTACATGAC+TGG + tig0019129:124167-124186 None:intergenic 25.0%
! TATACAACTCAAATAGAACA+AGG + tig0019129:124217-124236 None:intergenic 25.0%
! AAAGACCTAAAATACATTAG+TGG + tig0019129:124298-124317 None:intergenic 25.0%
! TATCTGCAAATAATCAGTAA+TGG + tig0019129:124323-124342 None:intergenic 25.0%
! AAAATTCCATAATCAAAAGG+TGG + tig0019129:124532-124551 None:intergenic 25.0%
! AATATCTTTACTGTTTATGG+TGG - tig0019129:124602-124621 Msa1370530:intron 25.0%
! ATATCTTTACTGTTTATGGT+GGG - tig0019129:124603-124622 Msa1370530:intron 25.0%
! AAACCTAACTTCAGAAATTA+AGG + tig0019129:124749-124768 None:intergenic 25.0%
!!! AGTTAAGGTCATTGATTTTA+TGG - tig0019129:124789-124808 Msa1370530:intron 25.0%
!! AGTTTCTATGTCTAAAATAC+TGG - tig0019129:124812-124831 Msa1370530:intron 25.0%
! TATCTCAGAACTTCTTATAA+AGG - tig0019129:124916-124935 Msa1370530:intron 25.0%
! CAAATAATCAATGAAATCAC+GGG + tig0019129:125117-125136 None:intergenic 25.0%
! AAGTAAATGAAAATAGGTTG+TGG + tig0019129:125144-125163 None:intergenic 25.0%
! GAAATATGATAAAATAGAGG+AGG - tig0019129:125350-125369 Msa1370530:intron 25.0%
! GTATAAATAGGAGAATATGA+TGG + tig0019129:125450-125469 None:intergenic 25.0%
!!! TATTTTTATACTCATGCAGA+AGG + tig0019129:126238-126257 None:intergenic 25.0%
!! ATATAGTGTTTGAGATTTGT+TGG - tig0019129:126255-126274 Msa1370530:intron 25.0%
! GAAAATCAATCAGTGAAATA+AGG + tig0019129:126429-126448 None:intergenic 25.0%
!!! ACTTATTTTCATGGATTTGT+AGG - tig0019129:126534-126553 Msa1370530:intron 25.0%
! GTATTCTCTGTAAATAAACA+TGG + tig0019129:126619-126638 None:intergenic 25.0%
! CAGAGAATACTTATATTGTT+CGG - tig0019129:126629-126648 Msa1370530:intron 25.0%
! AGAGAATACTTATATTGTTC+GGG - tig0019129:126630-126649 Msa1370530:intron 25.0%
! GTAATATTGAAATTATGGGT+TGG - tig0019129:127423-127442 Msa1370530:five_prime_UTR 25.0%
TACGTGTTAGTCAATAGTAA+CGG - tig0019129:121559-121578 Msa1370530:CDS 30.0%
AATGTGTGTTTGGAAATCAT+GGG - tig0019129:121735-121754 Msa1370530:CDS 30.0%
! AAAAAAAATGCTGTGATGGA+AGG - tig0019129:121850-121869 Msa1370530:CDS 30.0%
!! ATATTGTTTTGTTCATCTGC+AGG - tig0019129:122154-122173 Msa1370530:intron 30.0%
! ACTGTGATTTGTAATCACTT+CGG + tig0019129:122216-122235 None:intergenic 30.0%
TGATTACAAATCACAGTACA+TGG - tig0019129:122219-122238 Msa1370530:intron 30.0%
! ATATTTTCGTTGCAATGTCA+TGG - tig0019129:122276-122295 Msa1370530:intron 30.0%
AACAATAGTGAAGTAACTAC+CGG + tig0019129:122457-122476 None:intergenic 30.0%
TTACTTCACTATTGTTTGAG+AGG - tig0019129:122461-122480 Msa1370530:intron 30.0%
AAATTAAACCATGGTAGTCA+TGG - tig0019129:122592-122611 Msa1370530:CDS 30.0%
!! ACCTCTAGGTCTTTTAAAAA+AGG - tig0019129:122625-122644 Msa1370530:CDS 30.0%
!!! TCCTTTTTTAAAAGACCTAG+AGG + tig0019129:122629-122648 None:intergenic 30.0%
TCTGAAGGACTGAAATTAAT+TGG - tig0019129:122661-122680 Msa1370530:CDS 30.0%
AAATTAATTGGTCGATCACT+TGG - tig0019129:122673-122692 Msa1370530:CDS 30.0%
ACAGGAAGATAAAAAAACAG+TGG + tig0019129:122835-122854 None:intergenic 30.0%
! TGTAATTCATCATTGATGAC+AGG + tig0019129:122853-122872 None:intergenic 30.0%
AATGATGAATTACACTGTCT+GGG - tig0019129:122859-122878 Msa1370530:intron 30.0%
TGACTATTATTGCCAACTTT+CGG + tig0019129:122891-122910 None:intergenic 30.0%
!! TAGCAAATAGAAAGCATCAA+TGG + tig0019129:122929-122948 None:intergenic 30.0%
! TGCTTTCTATTTGCTAAACA+TGG - tig0019129:122933-122952 Msa1370530:intron 30.0%
AAGATAACAGAGAACATTGT+TGG + tig0019129:123199-123218 None:intergenic 30.0%
!!! TTTTTTTTTTTTTTGGGGGG+GGG - tig0019129:123288-123307 Msa1370530:CDS 30.0%
! GCTCAATAATTTTTGTTAGC+TGG - tig0019129:123595-123614 Msa1370530:intron 30.0%
!! TATAAATGATGCTTTTTGGG+TGG - tig0019129:123640-123659 Msa1370530:intron 30.0%
! GATATACTGAACCCTTATTT+CGG - tig0019129:123667-123686 Msa1370530:intron 30.0%
! ATATACTGAACCCTTATTTC+GGG - tig0019129:123668-123687 Msa1370530:intron 30.0%
! CTTGTAATCAGATTGTTGTT+TGG - tig0019129:123948-123967 Msa1370530:CDS 30.0%
TATTCCTAGATTTCTTCGAA+TGG - tig0019129:124048-124067 Msa1370530:CDS 30.0%
!! CTCTTAAGTTCTGAAGTTAA+TGG + tig0019129:124076-124095 None:intergenic 30.0%
ACTGATTATTTGCAGATAGT+TGG - tig0019129:124325-124344 Msa1370530:intron 30.0%
TATCTTTACTGTTTATGGTG+GGG - tig0019129:124604-124623 Msa1370530:intron 30.0%
!! GAACCTTAATTTCTGAAGTT+AGG - tig0019129:124743-124762 Msa1370530:intron 30.0%
CTTATCCTTCAATTGAGTTA+AGG - tig0019129:124774-124793 Msa1370530:intron 30.0%
AATGACCTTAACTCAATTGA+AGG + tig0019129:124782-124801 None:intergenic 30.0%
TAATAGACCATATCAATGGT+AGG - tig0019129:124891-124910 Msa1370530:intron 30.0%
AATAGACCATATCAATGGTA+GGG - tig0019129:124892-124911 Msa1370530:intron 30.0%
GCAGTGAAGTAAATGAAAAT+AGG + tig0019129:125150-125169 None:intergenic 30.0%
ACGTATCGTAAAAGTAAGAA+TGG - tig0019129:125308-125327 Msa1370530:intron 30.0%
ATGGTATTCTCTATTGTGAA+GGG + tig0019129:125393-125412 None:intergenic 30.0%
TATGGTATTCTCTATTGTGA+AGG + tig0019129:125394-125413 None:intergenic 30.0%
TTTGTTAGGATATGGGATAA+GGG + tig0019129:125533-125552 None:intergenic 30.0%
ATTGTTAGGATGAGATAAGA+GGG + tig0019129:125559-125578 None:intergenic 30.0%
TGAGAATATGAGTATGTGTT+AGG + tig0019129:125600-125619 None:intergenic 30.0%
CTTCATAGTTGAGAACTATA+TGG - tig0019129:125652-125671 Msa1370530:CDS 30.0%
GTGCTCATGTAAATAACATT+TGG + tig0019129:125685-125704 None:intergenic 30.0%
TGAAGATATGTCTGCAATAA+CGG + tig0019129:125805-125824 None:intergenic 30.0%
GTATGATCAATATAAGTGGT+TGG - tig0019129:125930-125949 Msa1370530:CDS 30.0%
!!! ACTTGACTTTTTTCCGATAA+AGG - tig0019129:126120-126139 Msa1370530:intron 30.0%
!! TGAGTTGATGAAATAGTTCA+TGG + tig0019129:126313-126332 None:intergenic 30.0%
GATTAAGTTAATCTACCAGA+GGG + tig0019129:126476-126495 None:intergenic 30.0%
TGATTAAGTTAATCTACCAG+AGG + tig0019129:126477-126496 None:intergenic 30.0%
AATACTTATATTGTTCGGGA+AGG - tig0019129:126634-126653 Msa1370530:intron 30.0%
!! TTCGTTTTTACTCTCAACAA+TGG - tig0019129:126947-126966 Msa1370530:intron 30.0%
TATGACTGAACTTGTGAAAA+AGG - tig0019129:127290-127309 Msa1370530:intron 30.0%
TAGTATACATTAAGCCTAAC+TGG - tig0019129:127349-127368 Msa1370530:five_prime_UTR 30.0%
!! ATTATGGGTTGGAAGAATTA+AGG - tig0019129:127434-127453 Msa1370530:five_prime_UTR 30.0%
TGAAAGTGAAGTTGAAGTTG+CGG + tig0019129:121195-121214 None:intergenic 35.0%
TTGGAGAGAGAAGAAGAAAA+CGG + tig0019129:121242-121261 None:intergenic 35.0%
! TTAACAAGAAAAGCACAGTG+AGG + tig0019129:121329-121348 None:intergenic 35.0%
!! TGGTGATTTGCTGTATCATA+AGG - tig0019129:121529-121548 Msa1370530:CDS 35.0%
AGTCAATAGTAACGGCAATA+TGG - tig0019129:121567-121586 Msa1370530:CDS 35.0%
!!! TCTCTCTCAGGGTTTTATTT+GGG + tig0019129:121629-121648 None:intergenic 35.0%
!!! TTCTCTCTCAGGGTTTTATT+TGG + tig0019129:121630-121649 None:intergenic 35.0%
! CTTTGTTTGTTTCTCTCTCA+GGG + tig0019129:121640-121659 None:intergenic 35.0%
! TCTTTGTTTGTTTCTCTCTC+AGG + tig0019129:121641-121660 None:intergenic 35.0%
CGTTGAATTGAATGTGTGTT+TGG - tig0019129:121725-121744 Msa1370530:CDS 35.0%
GAATGTGTGTTTGGAAATCA+TGG - tig0019129:121734-121753 Msa1370530:CDS 35.0%
TCTTTCCTATGGGAATAAGA+GGG - tig0019129:121817-121836 Msa1370530:CDS 35.0%
!! TACATATGGGTTTTAACACC+TGG - tig0019129:121954-121973 Msa1370530:CDS 35.0%
!! TGCTCAAGATTACTTTTACC+AGG + tig0019129:121975-121994 None:intergenic 35.0%
!!! TGAGCATGAGTTTCTAGTTT+TGG - tig0019129:121989-122008 Msa1370530:intron 35.0%
!!! GAGCATGAGTTTCTAGTTTT+GGG - tig0019129:121990-122009 Msa1370530:intron 35.0%
GTCAAACATCTTTCAACAGT+AGG + tig0019129:122194-122213 None:intergenic 35.0%
TACAAATCACAGTACATGGA+TGG - tig0019129:122223-122242 Msa1370530:intron 35.0%
ATGTCTTTCTCTGATCTAGA+TGG - tig0019129:122408-122427 Msa1370530:intron 35.0%
TGTCTTTCTCTGATCTAGAT+GGG - tig0019129:122409-122428 Msa1370530:intron 35.0%
! TTTTTCTAGGTGGGATTTCT+TGG - tig0019129:122510-122529 Msa1370530:CDS 35.0%
GATGTCAGAGTTACAAAATC+TGG - tig0019129:122556-122575 Msa1370530:CDS 35.0%
!! TCAGACACTTTAAGATCTTC+TGG + tig0019129:122724-122743 None:intergenic 35.0%
!!! ATGCATTTTTTCCGTGTTTG+TGG - tig0019129:122807-122826 Msa1370530:intron 35.0%
CAATGATGAATTACACTGTC+TGG - tig0019129:122858-122877 Msa1370530:intron 35.0%
GCAGCGAAAATATTATCTCA+TGG + tig0019129:123235-123254 None:intergenic 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG - tig0019129:123289-123308 Msa1370530:CDS 35.0%
CACTTATTCTTTCTTCTCTC+GGG + tig0019129:123355-123374 None:intergenic 35.0%
GCACTTATTCTTTCTTCTCT+CGG + tig0019129:123356-123375 None:intergenic 35.0%
ATGCAACAAGATTGGTGTAT+TGG + tig0019129:123443-123462 None:intergenic 35.0%
AAACAGGTATGCAACAAGAT+TGG + tig0019129:123451-123470 None:intergenic 35.0%
TTGGACATGTTAGTGAATGT+CGG + tig0019129:123793-123812 None:intergenic 35.0%
TTGTTTGGAGATTTCTTCAG+AGG - tig0019129:123963-123982 Msa1370530:CDS 35.0%
AAGCAAGATAATGAACAGCA+AGG + tig0019129:124023-124042 None:intergenic 35.0%
CAAATAGAACAAGGAAGCAA+AGG + tig0019129:124208-124227 None:intergenic 35.0%
! CTCTGCCACTAATGTATTTT+AGG - tig0019129:124290-124309 Msa1370530:intron 35.0%
ATTCCATAATCAAAAGGTGG+AGG + tig0019129:124529-124548 None:intergenic 35.0%
TGAAATGATACCAGATGACA+AGG + tig0019129:124563-124582 None:intergenic 35.0%
ATCTTTACTGTTTATGGTGG+GGG - tig0019129:124605-124624 Msa1370530:intron 35.0%
! TTGTCCAGATAAGAGTGTAT+TGG - tig0019129:124669-124688 Msa1370530:intron 35.0%
AAGTCCAATACACTCTTATC+TGG + tig0019129:124676-124695 None:intergenic 35.0%
TACAGAGCAAAGTAATGAGT+GGG + tig0019129:124719-124738 None:intergenic 35.0%
TTACAGAGCAAAGTAATGAG+TGG + tig0019129:124720-124739 None:intergenic 35.0%
AGATAACCCTACCATTGATA+TGG + tig0019129:124901-124920 None:intergenic 35.0%
!!! GTTCTAAAGCCTGCATTTTT+TGG - tig0019129:124945-124964 Msa1370530:intron 35.0%
TGAAACAAGCCAAAAAATGC+AGG + tig0019129:124957-124976 None:intergenic 35.0%
!!! TTTTGGCTTGTTTCACGTTT+TGG - tig0019129:124962-124981 Msa1370530:intron 35.0%
TAATCAATGAAATCACGGGA+GGG + tig0019129:125113-125132 None:intergenic 35.0%
ATAATCAATGAAATCACGGG+AGG + tig0019129:125114-125133 None:intergenic 35.0%
TTCAAACTAGCACATATCCT+GGG - tig0019129:125189-125208 Msa1370530:intron 35.0%
TGGTATTCTCTATTGTGAAG+GGG + tig0019129:125392-125411 None:intergenic 35.0%
GGATAACGAGGAGTTAAATA+GGG + tig0019129:125493-125512 None:intergenic 35.0%
AGGATAACGAGGAGTTAAAT+AGG + tig0019129:125494-125513 None:intergenic 35.0%
AGTAACAACATAGGATAACG+AGG + tig0019129:125505-125524 None:intergenic 35.0%
TTGTTAGGATATGGGATAAG+GGG + tig0019129:125532-125551 None:intergenic 35.0%
! GTTTGTTAGGATATGGGATA+AGG + tig0019129:125534-125553 None:intergenic 35.0%
!! AGGGAAGTTTGTTAGGATAT+GGG + tig0019129:125540-125559 None:intergenic 35.0%
! AGATAAGAGGGAAGTTTGTT+AGG + tig0019129:125547-125566 None:intergenic 35.0%
GATTGTTAGGATGAGATAAG+AGG + tig0019129:125560-125579 None:intergenic 35.0%
! TTTAGTTCAGAGTCTACCAA+AGG - tig0019129:125978-125997 Msa1370530:CDS 35.0%
ATATCTCTTCGAAGATCCTT+TGG + tig0019129:125997-126016 None:intergenic 35.0%
TATTAAGCGTCATCTCTGTT+TGG - tig0019129:126014-126033 Msa1370530:CDS 35.0%
TCTCTTACGTGTGACTAAAA+AGG - tig0019129:126097-126116 Msa1370530:intron 35.0%
! TCTCTCTTAGATTAGTTACC+TGG - tig0019129:126286-126305 Msa1370530:intron 35.0%
AACTCCAAAAAGTCACATAG+AGG + tig0019129:126380-126399 None:intergenic 35.0%
AAATTCGAAATTGATCCCTC+TGG - tig0019129:126458-126477 Msa1370530:intron 35.0%
TCATCCATACTCTCAAATAG+TGG + tig0019129:126562-126581 None:intergenic 35.0%
!! ATGAAAAGCATCTCATCAAC+TGG + tig0019129:126664-126683 None:intergenic 35.0%
TTTCAACCGCACATATCTAA+AGG - tig0019129:126735-126754 Msa1370530:intron 35.0%
!!! CTTGTTTTATTCAAGCAGCA+TGG - tig0019129:126983-127002 Msa1370530:intron 35.0%
AATTATGAAGCTTCGTCAGA+AGG - tig0019129:127026-127045 Msa1370530:intron 35.0%
!! AAACTTTGAGGCTAATAAGG+CGG + tig0019129:127109-127128 None:intergenic 35.0%
GTAAATAAGTTACATGCTGG+TGG + tig0019129:127392-127411 None:intergenic 35.0%
ACGGTAAATAAGTTACATGC+TGG + tig0019129:127395-127414 None:intergenic 35.0%
ACAGTTTCTCTCTCTCTATG+AGG - tig0019129:121215-121234 Msa1370530:three_prime_UTR 40.0%
TTACAATTGTTGCCCAACTC+TGG - tig0019129:121782-121801 Msa1370530:CDS 40.0%
TTATCAGGGTCTCTTTCCTA+TGG - tig0019129:121806-121825 Msa1370530:CDS 40.0%
TATCAGGGTCTCTTTCCTAT+GGG - tig0019129:121807-121826 Msa1370530:CDS 40.0%
CTCTTTCCTATGGGAATAAG+AGG - tig0019129:121816-121835 Msa1370530:CDS 40.0%
!! CTAAAAGCATCATGGTAGAG+AGG + tig0019129:122071-122090 None:intergenic 40.0%
ACCTAAAAGAACTTTCTCGC+TGG + tig0019129:122249-122268 None:intergenic 40.0%
!! GTAACTACCGGTTCATAAAC+AGG + tig0019129:122445-122464 None:intergenic 40.0%
AAACAGTGGATCCACAAACA+CGG + tig0019129:122821-122840 None:intergenic 40.0%
CAATAATAGTCACCACCTTG+AGG - tig0019129:122899-122918 Msa1370530:intron 40.0%
! ACAGAAGTCTTTTCAACCTG+TGG + tig0019129:123099-123118 None:intergenic 40.0%
!! CAGAGAACATTGTTGGTAGT+TGG + tig0019129:123192-123211 None:intergenic 40.0%
TCCTCTTGCTTCTTACTCAT+AGG - tig0019129:123257-123276 Msa1370530:intron 40.0%
TCCTATGAGTAAGAAGCAAG+AGG + tig0019129:123261-123280 None:intergenic 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG - tig0019129:123290-123309 Msa1370530:CDS 40.0%
AGTGTTTGCCTATTTGTCTG+TGG + tig0019129:123416-123435 None:intergenic 40.0%
!!! ATGATGCTTTTTGGGTGGAT+TGG - tig0019129:123645-123664 Msa1370530:intron 40.0%
TGATGTACTAGCAACAAAGC+AGG - tig0019129:123997-124016 Msa1370530:CDS 40.0%
GGTACCATTCGAAGAAATCT+AGG + tig0019129:124055-124074 None:intergenic 40.0%
TCAGAACTTAAGAGAACAGC+TGG - tig0019129:124082-124101 Msa1370530:CDS 40.0%
!! TGCAGATAGTTGGTGCTTTT+TGG - tig0019129:124335-124354 Msa1370530:intron 40.0%
! TTTTGTTGCACCCATTGTCA+CGG + tig0019129:124408-124427 None:intergenic 40.0%
!!! AGCTTTGCTTTTGTTTTGCC+AGG + tig0019129:124473-124492 None:intergenic 40.0%
!! GATCCTCCACCTTTTGATTA+TGG - tig0019129:124523-124542 Msa1370530:CDS 40.0%
! TTTAAGCAAGCCTTGTCATC+TGG - tig0019129:124550-124569 Msa1370530:CDS 40.0%
! AGTGTATTGGACTTCCCTTT+TGG - tig0019129:124682-124701 Msa1370530:intron 40.0%
ACAGAGCAAAGTAATGAGTG+GGG + tig0019129:124718-124737 None:intergenic 40.0%
AGAGCAAAGCGCATATTGTA+GGG + tig0019129:125072-125091 None:intergenic 40.0%
AATCAATGAAATCACGGGAG+GGG + tig0019129:125112-125131 None:intergenic 40.0%
CTTCAAACTAGCACATATCC+TGG - tig0019129:125188-125207 Msa1370530:intron 40.0%
TCAAACTAGCACATATCCTG+GGG - tig0019129:125190-125209 Msa1370530:intron 40.0%
ATTGAAAAGATAACCTCCCC+AGG + tig0019129:125209-125228 None:intergenic 40.0%
TCAATAGCACTTGCCATATC+AGG - tig0019129:125224-125243 Msa1370530:intron 40.0%
TTACGATACGTCAAGCTCAA+TGG + tig0019129:125299-125318 None:intergenic 40.0%
AATAGAGGAGGATCTCTCTA+AGG - tig0019129:125362-125381 Msa1370530:intron 40.0%
ATAGAGGAGGATCTCTCTAA+GGG - tig0019129:125363-125382 Msa1370530:intron 40.0%
GAGGAGTTAAATAGGGATGT+TGG + tig0019129:125486-125505 None:intergenic 40.0%
AGGGGAGTTAGTAACAACAT+AGG + tig0019129:125514-125533 None:intergenic 40.0%
!! GAGGGAAGTTTGTTAGGATA+TGG + tig0019129:125541-125560 None:intergenic 40.0%
AAGACAGTGAGGAGATTGTT+AGG + tig0019129:125573-125592 None:intergenic 40.0%
TGTTAGGACATAAGACAGTG+AGG + tig0019129:125584-125603 None:intergenic 40.0%
AGTTGAGAACTATATGGCTG+TGG - tig0019129:125658-125677 Msa1370530:CDS 40.0%
TGGAGGAAATGAGAGTCAAA+AGG - tig0019129:125842-125861 Msa1370530:CDS 40.0%
! AAAGGCGTGATTCAGAACAA+TGG - tig0019129:125860-125879 Msa1370530:CDS 40.0%
GGCGGTATGATCAATATAAG+TGG - tig0019129:125926-125945 Msa1370530:CDS 40.0%
!! ATCTCTGTTTGGCTTTAGTG+AGG - tig0019129:126025-126044 Msa1370530:intron 40.0%
!!! ACACGTAAGAGAGAGTGTTT+TGG + tig0019129:126089-126108 None:intergenic 40.0%
ACTGCACAACAACATCAATG+TGG + tig0019129:126190-126209 None:intergenic 40.0%
GATGAAATAGTTCATGGACC+AGG + tig0019129:126307-126326 None:intergenic 40.0%
! AGTGCCTCTATGTGACTTTT+TGG - tig0019129:126373-126392 Msa1370530:intron 40.0%
GGTTCCACTATTTGAGAGTA+TGG - tig0019129:126555-126574 Msa1370530:intron 40.0%
TGGTTTCAGTCTCTCACATA+TGG + tig0019129:126599-126618 None:intergenic 40.0%
! GAGATGCTTTTCATCATACG+CGG - tig0019129:126670-126689 Msa1370530:intron 40.0%
! AGATGCTTTTCATCATACGC+GGG - tig0019129:126671-126690 Msa1370530:intron 40.0%
GAAGATTAGAACCAGATCTG+GGG + tig0019129:126804-126823 None:intergenic 40.0%
GGAAGATTAGAACCAGATCT+GGG + tig0019129:126805-126824 None:intergenic 40.0%
TGGAAGATTAGAACCAGATC+TGG + tig0019129:126806-126825 None:intergenic 40.0%
CTAATCTTCCAACCTCTACT+CGG - tig0019129:126815-126834 Msa1370530:intron 40.0%
AACAAATTTCAGCTCATCGG+CGG + tig0019129:126881-126900 None:intergenic 40.0%
GGCAACAAATTTCAGCTCAT+CGG + tig0019129:126884-126903 None:intergenic 40.0%
TTGAATAAAACAAGCAGCCC+AGG + tig0019129:126977-126996 None:intergenic 40.0%
!! GGCAAACTTTGAGGCTAATA+AGG + tig0019129:127112-127131 None:intergenic 40.0%
TTGTAATTTCACCAACTCCC+TGG + tig0019129:127181-127200 None:intergenic 40.0%
ACCTAATATGACAGCCAGTT+AGG + tig0019129:127366-127385 None:intergenic 40.0%
!! GATCCTTCCTCCTTGTTGTT+CGG - tig0019129:121104-121123 Msa1370530:three_prime_UTR 45.0%
AAACTCTGCACCGAACAACA+AGG + tig0019129:121117-121136 None:intergenic 45.0%
GTGAGGAGAATGAATAGCGA+CGG + tig0019129:121312-121331 None:intergenic 45.0%
TTGCCCAACTCTGGATTATC+AGG - tig0019129:121791-121810 Msa1370530:CDS 45.0%
TGCCCAACTCTGGATTATCA+GGG - tig0019129:121792-121811 Msa1370530:CDS 45.0%
GACCCTGATAATCCAGAGTT+GGG + tig0019129:121797-121816 None:intergenic 45.0%
AGACCCTGATAATCCAGAGT+TGG + tig0019129:121798-121817 None:intergenic 45.0%
GGTAACCCTCTTATTCCCAT+AGG + tig0019129:121825-121844 None:intergenic 45.0%
GTAGAGAGGCTGAAACAACT+TGG + tig0019129:122057-122076 None:intergenic 45.0%
! GCCAGCGAGAAAGTTCTTTT+AGG - tig0019129:122245-122264 Msa1370530:intron 45.0%
GGAATGAGAAAGGGATCTGA+AGG - tig0019129:122646-122665 Msa1370530:CDS 45.0%
AATTGGTCGATCACTTGGAC+TGG - tig0019129:122678-122697 Msa1370530:CDS 45.0%
ATTGGTCGATCACTTGGACT+GGG - tig0019129:122679-122698 Msa1370530:CDS 45.0%
TCTGGGTATAGACCGAAAGT+TGG - tig0019129:122876-122895 Msa1370530:intron 45.0%
CAATGTAAGCCGTGCGAAAT+TGG + tig0019129:122963-122982 None:intergenic 45.0%
CTCCATCATCTCGTGTCTTT+GGG - tig0019129:122983-123002 Msa1370530:intron 45.0%
! ATATCGTCGCAAGTATCGCT+TGG + tig0019129:123043-123062 None:intergenic 45.0%
! GTCTTTTCAACCTGTGGTAC+TGG + tig0019129:123093-123112 None:intergenic 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG - tig0019129:123291-123310 Msa1370530:CDS 45.0%
TGGCAATGCCACAGACAAAT+AGG - tig0019129:123405-123424 Msa1370530:intron 45.0%
CCTTGTCTCTCCCGAAATAA+GGG + tig0019129:123681-123700 None:intergenic 45.0%
TCCTTGTCTCTCCCGAAATA+AGG + tig0019129:123682-123701 None:intergenic 45.0%
TGTCTTTGCCGAAACTGCAT+GGG - tig0019129:124105-124124 Msa1370530:CDS 45.0%
TTGAACGCAATGACTCATGC+TGG - tig0019129:124371-124390 Msa1370530:intron 45.0%
AGAATGCTTGCCGTGACAAT+GGG - tig0019129:124395-124414 Msa1370530:CDS 45.0%
GTATTGTGAGAACCAGCACA+CGG - tig0019129:124435-124454 Msa1370530:CDS 45.0%
GGGGTGATTATGCACCAAAA+GGG + tig0019129:124699-124718 None:intergenic 45.0%
TGGGGTGATTATGCACCAAA+AGG + tig0019129:124700-124719 None:intergenic 45.0%
AAGCGCATATTGTAGGGATC+TGG + tig0019129:125066-125085 None:intergenic 45.0%
GAGAGCAAAGCGCATATTGT+AGG + tig0019129:125073-125092 None:intergenic 45.0%
ATCAATGAAATCACGGGAGG+GGG + tig0019129:125111-125130 None:intergenic 45.0%
TTACTTCACTGCAGTACCCT+TGG - tig0019129:125158-125177 Msa1370530:intron 45.0%
GAAGAGGATGAGACCTGATA+TGG + tig0019129:125240-125259 None:intergenic 45.0%
ATCTTCAGTCCCTTACCCTT+AGG - tig0019129:125818-125837 Msa1370530:CDS 45.0%
TCTCATTTCCTCCAGCCTAA+GGG + tig0019129:125836-125855 None:intergenic 45.0%
! CACGCTCTCTAAGCTCTTTT+GGG + tig0019129:125903-125922 None:intergenic 45.0%
! ACACGCTCTCTAAGCTCTTT+TGG + tig0019129:125904-125923 None:intergenic 45.0%
TATAAGTGGTTGGCAACACG+TGG - tig0019129:125940-125959 Msa1370530:CDS 45.0%
!! TCTGTTTGGCTTTAGTGAGG+AGG - tig0019129:126028-126047 Msa1370530:intron 45.0%
!! CTGTTTGGCTTTAGTGAGGA+GGG - tig0019129:126029-126048 Msa1370530:intron 45.0%
!! CTTGAGAGTGTTACCACAGA+TGG - tig0019129:126697-126716 Msa1370530:intron 45.0%
! AGAGTGTTACCACAGATGGT+GGG - tig0019129:126701-126720 Msa1370530:intron 45.0%
CAACCGCACATATCTAAAGG+AGG - tig0019129:126738-126757 Msa1370530:intron 45.0%
CAGCCTCCTTTAGATATGTG+CGG + tig0019129:126744-126763 None:intergenic 45.0%
TAAAGGAGGCTGAGTTCTGT+GGG - tig0019129:126752-126771 Msa1370530:intron 45.0%
! TGGGGAGGAGCTTTTAACAT+GGG - tig0019129:126771-126790 Msa1370530:intron 45.0%
GTGAAGACGTCTAAACTGAC+TGG + tig0019129:126905-126924 None:intergenic 45.0%
TAGACGTCTTCACAGTAGAC+AGG - tig0019129:126912-126931 Msa1370530:intron 45.0%
ACTCTCAACAATGGAGAACC+TGG - tig0019129:126956-126975 Msa1370530:intron 45.0%
CTCTCAACAATGGAGAACCT+GGG - tig0019129:126957-126976 Msa1370530:intron 45.0%
GATGAGTCAGAAGGAAGTCA+CGG - tig0019129:127057-127076 Msa1370530:intron 45.0%
GCATCATCTGCTGTAAAGTC+AGG + tig0019129:127216-127235 None:intergenic 45.0%
GCCTAACTGGCTGTCATATT+AGG - tig0019129:127362-127381 Msa1370530:five_prime_UTR 45.0%
!!! TTTAAAAAAAATAATTTTGA+AGG - tig0019129:121429-121448 Msa1370530:CDS 5.0%
!!! TTAAAAAAAATAATTTTGAA+GGG - tig0019129:121430-121449 Msa1370530:CDS 5.0%
!!! ATGTTTTTTTTTTTTTTTTT+TGG - tig0019129:123281-123300 Msa1370530:CDS 5.0%
!!! TGTTTTTTTTTTTTTTTTTT+GGG - tig0019129:123282-123301 Msa1370530:CDS 5.0%
GAATGAATAGCGACGGTGGA+CGG + tig0019129:121305-121324 None:intergenic 50.0%
AGGAGAATGAATAGCGACGG+TGG + tig0019129:121309-121328 None:intergenic 50.0%
! TGCTGCTTCCATGACTACCA+TGG + tig0019129:122603-122622 None:intergenic 50.0%
ATGGAAGCAGCACAACCTCT+AGG - tig0019129:122611-122630 Msa1370530:CDS 50.0%
TTGGTCGATCACTTGGACTG+GGG - tig0019129:122680-122699 Msa1370530:CDS 50.0%
!! ACTTGGACTGGGGGTATCTA+AGG - tig0019129:122690-122709 Msa1370530:CDS 50.0%
ATCAATGGCTGTCCTCAAGG+TGG + tig0019129:122914-122933 None:intergenic 50.0%
AGCATCAATGGCTGTCCTCA+AGG + tig0019129:122917-122936 None:intergenic 50.0%
CATGGCTCTCCAATTTCGCA+CGG - tig0019129:122951-122970 Msa1370530:intron 50.0%
GCTCCATCATCTCGTGTCTT+TGG - tig0019129:122982-123001 Msa1370530:intron 50.0%
CATCATCTCGTGTCTTTGGG+CGG - tig0019129:122986-123005 Msa1370530:intron 50.0%
ATCATCTCGTGTCTTTGGGC+GGG - tig0019129:122987-123006 Msa1370530:intron 50.0%
GGGCGAGCTTGTGATAGATT+CGG - tig0019129:123008-123027 Msa1370530:intron 50.0%
!! GTGGTACTGGCAACACAGAT+AGG + tig0019129:123080-123099 None:intergenic 50.0%
ATCTGTGTTGCCAGTACCAC+AGG - tig0019129:123080-123099 Msa1370530:intron 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG - tig0019129:123292-123311 Msa1370530:CDS 50.0%
! CCCTTATTTCGGGAGAGACA+AGG - tig0019129:123678-123697 Msa1370530:intron 50.0%
GTGTCTTTGCCGAAACTGCA+TGG - tig0019129:124104-124123 Msa1370530:CDS 50.0%
CAGAATGCTTGCCGTGACAA+TGG - tig0019129:124394-124413 Msa1370530:CDS 50.0%
CACTATAACCTTCCGTGTGC+TGG + tig0019129:124450-124469 None:intergenic 50.0%
ACACGGAAGGTTATAGTGCC+TGG - tig0019129:124452-124471 Msa1370530:CDS 50.0%
TCAATGAAATCACGGGAGGG+GGG + tig0019129:125110-125129 None:intergenic 50.0%
! AGTTTGAAGCCCCTGACCAA+GGG + tig0019129:125177-125196 None:intergenic 50.0%
! TAGTTTGAAGCCCCTGACCA+AGG + tig0019129:125178-125197 None:intergenic 50.0%
AACTAGCACATATCCTGGGG+AGG - tig0019129:125193-125212 Msa1370530:intron 50.0%
ATCCTCTTCGCGCTTCTGAT+TGG - tig0019129:125251-125270 Msa1370530:intron 50.0%
GCTTCTGATTGGCAACATGC+AGG - tig0019129:125262-125281 Msa1370530:intron 50.0%
TTCCTCCAGCCTAAGGGTAA+GGG + tig0019129:125830-125849 None:intergenic 50.0%
TTTCCTCCAGCCTAAGGGTA+AGG + tig0019129:125831-125850 None:intergenic 50.0%
CTCTCATTTCCTCCAGCCTA+AGG + tig0019129:125837-125856 None:intergenic 50.0%
! AAGAGCTTAGAGAGCGTGTG+AGG - tig0019129:125905-125924 Msa1370530:CDS 50.0%
!! GAGAGTGTTACCACAGATGG+TGG - tig0019129:126700-126719 Msa1370530:intron 50.0%
CTAAAGGAGGCTGAGTTCTG+TGG - tig0019129:126751-126770 Msa1370530:intron 50.0%
AAAGGAGGCTGAGTTCTGTG+GGG - tig0019129:126753-126772 Msa1370530:intron 50.0%
! GTGGGGAGGAGCTTTTAACA+TGG - tig0019129:126770-126789 Msa1370530:intron 50.0%
TTCACAGTCCGAGTAGAGGT+TGG + tig0019129:126826-126845 None:intergenic 50.0%
AACCTCTACTCGGACTGTGA+AGG - tig0019129:126825-126844 Msa1370530:intron 50.0%
!! GACTGTGAAGGCGTTAACAG+AGG - tig0019129:126837-126856 Msa1370530:intron 50.0%
TTTCAGCTCATCGGCGGTTA+AGG + tig0019129:126875-126894 None:intergenic 50.0%
GCTTCGTCAGAAGGAAGAAG+CGG - tig0019129:127035-127054 Msa1370530:intron 50.0%
GAAGAAGCGGATGAGTCAGA+AGG - tig0019129:127048-127067 Msa1370530:intron 50.0%
TCAGAAGGAAGTCACGGCAA+CGG - tig0019129:127063-127082 Msa1370530:intron 50.0%
TGCTGTAAAGTCAGGCTCAG+GGG + tig0019129:127208-127227 None:intergenic 50.0%
CTGCTGTAAAGTCAGGCTCA+GGG + tig0019129:127209-127228 None:intergenic 50.0%
TCTGCTGTAAAGTCAGGCTC+AGG + tig0019129:127210-127229 None:intergenic 50.0%
GCACCGAACAACAAGGAGGA+AGG + tig0019129:121110-121129 None:intergenic 55.0%
CTCTGCACCGAACAACAAGG+AGG + tig0019129:121114-121133 None:intergenic 55.0%
! TGGTCGATCACTTGGACTGG+GGG - tig0019129:122681-122700 Msa1370530:CDS 55.0%
CGCCCAAAGACACGAGATGA+TGG + tig0019129:122988-123007 None:intergenic 55.0%
TCATCTCGTGTCTTTGGGCG+GGG - tig0019129:122988-123007 Msa1370530:intron 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG - tig0019129:123293-123312 Msa1370530:CDS 55.0%
CTTTGCCGAAACTGCATGGG+CGG - tig0019129:124108-124127 Msa1370530:CDS 55.0%
TTTGCCGAAACTGCATGGGC+GGG - tig0019129:124109-124128 Msa1370530:CDS 55.0%
TGTGAGAACCAGCACACGGA+AGG - tig0019129:124439-124458 Msa1370530:CDS 55.0%
GGTGGGGGCTCCAGAATTTA+AGG - tig0019129:124620-124639 Msa1370530:intron 55.0%
TCACTGCAGTACCCTTGGTC+AGG - tig0019129:125163-125182 Msa1370530:intron 55.0%
CACTGCAGTACCCTTGGTCA+GGG - tig0019129:125164-125183 Msa1370530:intron 55.0%
ACTGCAGTACCCTTGGTCAG+GGG - tig0019129:125165-125184 Msa1370530:intron 55.0%
! TGCCAATCAGAAGCGCGAAG+AGG + tig0019129:125256-125275 None:intergenic 55.0%
TCAGTCCCTTACCCTTAGGC+TGG - tig0019129:125822-125841 Msa1370530:CDS 55.0%
! AGCTTAGAGAGCGTGTGAGG+CGG - tig0019129:125908-125927 Msa1370530:CDS 55.0%
!! GTGTTACCACAGATGGTGGG+AGG - tig0019129:126704-126723 Msa1370530:intron 55.0%
! GGAGCTTTTAACATGGGCCC+TGG - tig0019129:126777-126796 Msa1370530:intron 55.0%
! AGAACCAGATCTGGGGTCCA+GGG + tig0019129:126797-126816 None:intergenic 55.0%
! TAGAACCAGATCTGGGGTCC+AGG + tig0019129:126798-126817 None:intergenic 55.0%
TAATAAGGCGGCACCAAGGC+TGG + tig0019129:127097-127116 None:intergenic 55.0%
AGGCTAATAAGGCGGCACCA+AGG + tig0019129:127101-127120 None:intergenic 55.0%
GTCGATTGCGGTGTACACCA+CGG + tig0019129:127146-127165 None:intergenic 55.0%
CAGTCTTGGCGAGTCGATTG+CGG + tig0019129:127158-127177 None:intergenic 55.0%
GCTGTAAAGTCAGGCTCAGG+GGG + tig0019129:127207-127226 None:intergenic 55.0%
TGAATAGCGACGGTGGACGG+CGG + tig0019129:121302-121321 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG - tig0019129:123294-123313 Msa1370530:CDS 60.0%
!! GGGGGGGTTAGTTGGTAGGA+GGG - tig0019129:123310-123329 Msa1370530:CDS 60.0%
AGCACCCGCCCATGCAGTTT+CGG + tig0019129:124116-124135 None:intergenic 60.0%
GTCCCTTACCCTTAGGCTGG+AGG - tig0019129:125825-125844 Msa1370530:CDS 60.0%
!! ACCACAGATGGTGGGAGGAG+TGG - tig0019129:126709-126728 Msa1370530:intron 60.0%
ACCACTCCTCCCACCATCTG+TGG + tig0019129:126713-126732 None:intergenic 60.0%
CGCCTTCACAGTCCGAGTAG+AGG + tig0019129:126830-126849 None:intergenic 60.0%
AACGGCAGTTCCTCCAGCCT+TGG - tig0019129:127081-127100 Msa1370530:intron 60.0%
AGTGCGCGCGGCAAACTTTG+AGG + tig0019129:127121-127140 None:intergenic 60.0%
!! ATCGACTCGCCAAGACTGCC+AGG - tig0019129:127160-127179 Msa1370530:intron 60.0%
! TCGACTCGCCAAGACTGCCA+GGG - tig0019129:127161-127180 Msa1370530:intron 60.0%
CACCAACTCCCTGGCAGTCT+TGG + tig0019129:127172-127191 None:intergenic 60.0%
!! GGGGGGGGTTAGTTGGTAGG+AGG - tig0019129:123309-123328 Msa1370530:CDS 65.0%
GGAGGCTGAGTTCTGTGGGG+AGG - tig0019129:126756-126775 Msa1370530:intron 65.0%
TAAGGCGGCACCAAGGCTGG+AGG + tig0019129:127094-127113 None:intergenic 65.0%
! TACACCACGGAGAGTGCGCG+CGG + tig0019129:127133-127152 None:intergenic 65.0%
CGCCAAGACTGCCAGGGAGT+TGG - tig0019129:127167-127186 Msa1370530:intron 65.0%
!! GGGGGGGGGGGTTAGTTGGT+AGG - tig0019129:123306-123325 Msa1370530:CDS 70.0%
TGGGCCCTGGACCCCAGATC+TGG - tig0019129:126790-126809 Msa1370530:intron 70.0%
TTTGCCGCGCGCACTCTCCG+TGG - tig0019129:127126-127145 Msa1370530:intron 70.0%
!! GGGGGGGGGGGGGGGTTAGT+TGG - tig0019129:123302-123321 Msa1370530:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0019129 gene 121059 127501 121059 ID=Msa1370530;Name=Msa1370530
tig0019129 mRNA 121059 127501 121059 ID=Msa1370530-mRNA-1;Parent=Msa1370530;Name=Msa1370530-mRNA-1;_AED=0.10;_eAED=0.10;_QI=207|1|1|1|0.85|0.75|8|259|731
tig0019129 exon 121059 122004 121059 ID=Msa1370530-mRNA-1:exon:1739;Parent=Msa1370530-mRNA-1
tig0019129 exon 122510 122746 122510 ID=Msa1370530-mRNA-1:exon:1738;Parent=Msa1370530-mRNA-1
tig0019129 exon 123277 123388 123277 ID=Msa1370530-mRNA-1:exon:1737;Parent=Msa1370530-mRNA-1
tig0019129 exon 123919 124220 123919 ID=Msa1370530-mRNA-1:exon:1736;Parent=Msa1370530-mRNA-1
tig0019129 exon 124389 124601 124389 ID=Msa1370530-mRNA-1:exon:1735;Parent=Msa1370530-mRNA-1
tig0019129 exon 125459 126041 125459 ID=Msa1370530-mRNA-1:exon:1734;Parent=Msa1370530-mRNA-1
tig0019129 exon 126294 126384 126294 ID=Msa1370530-mRNA-1:exon:1733;Parent=Msa1370530-mRNA-1
tig0019129 exon 127324 127501 127324 ID=Msa1370530-mRNA-1:exon:1732;Parent=Msa1370530-mRNA-1
tig0019129 five_prime_UTR 127324 127501 127324 ID=Msa1370530-mRNA-1:five_prime_utr;Parent=Msa1370530-mRNA-1
tig0019129 five_prime_UTR 126356 126384 126356 ID=Msa1370530-mRNA-1:five_prime_utr;Parent=Msa1370530-mRNA-1
tig0019129 CDS 126294 126355 126294 ID=Msa1370530-mRNA-1:cds;Parent=Msa1370530-mRNA-1
tig0019129 CDS 125459 126041 125459 ID=Msa1370530-mRNA-1:cds;Parent=Msa1370530-mRNA-1
tig0019129 CDS 124389 124601 124389 ID=Msa1370530-mRNA-1:cds;Parent=Msa1370530-mRNA-1
tig0019129 CDS 123919 124220 123919 ID=Msa1370530-mRNA-1:cds;Parent=Msa1370530-mRNA-1
tig0019129 CDS 123277 123388 123277 ID=Msa1370530-mRNA-1:cds;Parent=Msa1370530-mRNA-1
tig0019129 CDS 122510 122746 122510 ID=Msa1370530-mRNA-1:cds;Parent=Msa1370530-mRNA-1
tig0019129 CDS 121318 122004 121318 ID=Msa1370530-mRNA-1:cds;Parent=Msa1370530-mRNA-1
tig0019129 three_prime_UTR 121059 121317 121059 ID=Msa1370530-mRNA-1:three_prime_utr;Parent=Msa1370530-mRNA-1
Gene Sequence

>Msa1370530

ATGTTTGACCGAAGTGATTACAAATCACAGTACATGGATGGCCAGCGAGAAAGTTCTTTTAGGTGGGATTTCTTGGATTCTAAACTATCTTCATCTTCTGATGTCAGAGTTACAAAATCTGGATTCAGTATTGATAAATTAAACCATGGTAGTCATGGAAGCAGCACAACCTCTAGGTCTTTTAAAAAAGGAATGAGAAAGGGATCTGAAGGACTGAAATTAATTGGTCGATCACTTGGACTGGGGGTATCTAAGGCAGTGTTTCCAGAAGATCTTAAAGTGTCTGAAAAGAAGATATTTGATCCCCAAGACAAATTTTTACTCTTATGGAATAAATTATTTGTTATCTCATGCATTTTTTCCGTGTTTGTGGATCCACTGTTTTTTTATCTTCCTGTCATCAATGATGAATTACACTGTCTGGGTATAGACCGAAAGTTGGCAATAATAGTCACCACCTTGAGGACAGCCATTGATGCTTTCTATTTGCTAAACATGGCTCTCCAATTTCGCACGGCTTACATTGCTCCATCATCTCGTGTCTTTGGGCGGGGCGAGCTTGTGATAGATTCGGCACAGATAGCCAAGCGATACTTGCGACGATATTTCATCGTTGATTTCCTATCTGTGTTGCCAGTACCACAGATTGTTGTTTGGAGATTTCTTCAGAGGTCAAAAAGTTCTGATGTACTAGCAACAAAGCAGGCCTTGCTGTTCATTATCTTGCTTCAGTATATTCCTAGATTTCTTCGAATGGTACCATTAACTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCCGAAACTGCATGGGCGGGTGCTGTATATTATTTGCTGTTATACATGCTTGCCAGTCATATAGTTGGTGCTTTTTGGTACTTGTTAGCTATTGAACGCAATGACTCATGCTGGCAGAATGCTTGCCGTGACAATGGGTGCAACAAAAACTACTTGTATTGTGAGAACCAGCACACGGAAGGTTATAGTGCCTGGCAAAACAAAAGCAAAGCTATTTTTAAATCAAAGTGCTCTGTAGATGATGATCCTCCACCTTTTGATTATGGAATTTTTAAGCAAGCCTTGTCATCTGGTATCATTTCATCCAAGAAATTCATCACAAAATATCTTTACTGTTTATGGTGGGGGCTCCAGAATTTAAGTACCCTTGGTCAGGGGCTTCAAACTAGCACATATCCTGGGGAGGTTATCTTTTCAATAGCACTTGCCATATCAGGTCTCATCCTCTTCGCGCTTCTGATTGGCAACATGCAGACATATCTTCAGTCCCTTACCCTTAGGCTGGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAATGGATGCATCATCGCTTGCTCCCAAAAGAGCTTAGAGAGCGTGTGAGGCGGTATGATCAATATAAGTGGTTGGCAACACGTGGTGTAGACGAAGATATTTTAGTTCAGAGTCTACCAAAGGATCTTCGAAGAGATATTAAGCGTCATCTCTGTTTGGCTTTAGTGAGGAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGACTGAAACCATGTTTATTTACAGAGAATACTTATATTGTTCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATACGCGGGCGTCTTGAGAGTGTTACCACAGATGGTGGGAGGAGTGGTTTTTTCAACCGCACATATCTAAAGGAGGCTGAGTTCTGTGGGGAGGAGCTTTTAACATGGGCCCTGGACCCCAGATCTGGTTCTAATCTTCCAACCTCTACTCGGACTGTGAAGGCGTTAACAGAGGTTGAGACTTTTGCCTTAACCGCCGATGAGCTGAAATTTGTTGCCAGTCAGTTTAGACGTCTTCACAGTAGACAGGTTCAACACACTTTTCGTTTTTACTCTCAACAATGGAGAACCTGGGCTGCTTGTTTTATTCAAGCAGCATGGCGTCGATATTGTAAAAAGAAAATTATGAAGCTTCGTCAGAAGGAAGAAGCGGATGAGTCAGAAGGAAGTCACGGCAACGGCAGTTCCTCCAGCCTTGGTGCCGCCTTATTAGCCTCAAAGTTTGCCGCGCGCACTCTCCGTGGTGTACACCGCAATCGACTCGCCAAGACTGCCAGGGAGTTGGTGAAATTACAAAAACCCCCTGAGCCTGACTTTACAGCAGATGATGCAGACTGA
Protein sequence

>Msa1370530

MFDRSDYKSQYMDGQRESSFRWDFLDSKLSSSSDVRVTKSGFSIDKLNHGSHGSSTTSRSFKKGMRKGSEGLKLIGRSLGLGVSKAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCIFSVFVDPLFFYLPVINDELHCLGIDRKLAIIVTTLRTAIDAFYLLNMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLRRYFIVDFLSVLPVPQIVVWRFLQRSKSSDVLATKQALLFIILLQYIPRFLRMVPLTSELKRTAGVFAETAWAGAVYYLLLYMLASHIVGAFWYLLAIERNDSCWQNACRDNGCNKNYLYCENQHTEGYSAWQNKSKAIFKSKCSVDDDPPPFDYGIFKQALSSGIISSKKFITKYLYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAISGLILFALLIGNMQTYLQSLTLRLEEMRVKRRDSEQWMHHRLLPKELRERVRRYDQYKWLATRGVDEDILVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTYLKEAEFCGEELLTWALDPRSGSNLPTSTRTVKALTEVETFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKKKIMKLRQKEEADESEGSHGNGSSSSLGAALLASKFAARTLRGVHRNRLAKTARELVKLQKPPEPDFTADDAD*