Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384040 | XP_003610314.1 | 98.363 | 733 | 8 | 2 | 1 | 731 | 1 | 731 | 0.0 | 1479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384040 | sp|Q8RWS9|CNGC5_ARATH | 77.500 | 720 | 156 | 4 | 12 | 728 | 1 | 717 | 0.0 | 1142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384040 | G7JGP4 | 98.363 | 733 | 8 | 2 | 1 | 731 | 1 | 731 | 0.0 | 1479 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1370530 | Msa1384040 | 0.998242 | 1.099848e-259 | -8.615850e-47 |
| Msa1384040 | Msa1421990 | 0.820385 | 7.053508e-53 | -8.615850e-47 |
| Msa0711130 | Msa1384040 | 0.802623 | 5.138559e-49 | -8.615850e-47 |
| Msa1250530 | Msa1384040 | 0.805866 | 1.085400e-49 | -8.615850e-47 |
| Msa1329550 | Msa1384040 | 0.810501 | 1.117189e-50 | -8.615850e-47 |
| Msa0286670 | Msa1384040 | 0.801782 | 7.655309e-49 | -8.615850e-47 |
| Msa0356960 | Msa1384040 | 0.807031 | 6.163830e-50 | -8.615850e-47 |
| Msa1131530 | Msa1384040 | 0.932494 | 7.824861e-95 | -8.615850e-47 |
| Msa1206100 | Msa1384040 | 0.808898 | 2.470392e-50 | -8.615850e-47 |
| Msa1222450 | Msa1384040 | 0.800350 | 1.502189e-48 | -8.615850e-47 |
| Msa0924310 | Msa1384040 | 0.821642 | 3.622346e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384040 | MtrunA17_Chr4g0073941 | 98.363 | 733 | 8 | 2 | 1 | 731 | 1 | 731 | 0.0 | 1479 |
| Msa1384040 | MtrunA17_Chr4g0001481 | 64.286 | 742 | 246 | 10 | 1 | 727 | 1 | 738 | 0.0 | 949 |
| Msa1384040 | MtrunA17_Chr3g0126541 | 55.448 | 725 | 303 | 8 | 12 | 729 | 1 | 712 | 0.0 | 812 |
| Msa1384040 | MtrunA17_Chr1g0158861 | 57.018 | 684 | 277 | 8 | 55 | 729 | 40 | 715 | 0.0 | 800 |
| Msa1384040 | MtrunA17_Chr2g0305771 | 54.948 | 677 | 272 | 9 | 80 | 731 | 22 | 690 | 0.0 | 752 |
| Msa1384040 | MtrunA17_Chr3g0139071 | 55.275 | 673 | 265 | 9 | 87 | 731 | 61 | 725 | 0.0 | 736 |
| Msa1384040 | MtrunA17_Chr2g0326871 | 51.385 | 722 | 323 | 12 | 13 | 728 | 4 | 703 | 0.0 | 726 |
| Msa1384040 | MtrunA17_Chr7g0275581 | 51.681 | 714 | 307 | 11 | 38 | 727 | 16 | 715 | 0.0 | 715 |
| Msa1384040 | MtrunA17_Chr4g0028861 | 56.187 | 598 | 252 | 6 | 67 | 660 | 90 | 681 | 0.0 | 712 |
| Msa1384040 | MtrunA17_Chr1g0181121 | 52.096 | 668 | 298 | 11 | 78 | 731 | 24 | 683 | 0.0 | 700 |
| Msa1384040 | MtrunA17_Chr7g0228181 | 50.617 | 648 | 293 | 8 | 98 | 728 | 43 | 680 | 0.0 | 674 |
| Msa1384040 | MtrunA17_Chr8g0347121 | 49.627 | 671 | 295 | 8 | 95 | 725 | 56 | 723 | 0.0 | 670 |
| Msa1384040 | MtrunA17_Chr3g0125651 | 48.892 | 677 | 309 | 8 | 88 | 731 | 20 | 692 | 0.0 | 669 |
| Msa1384040 | MtrunA17_Chr6g0481021 | 41.297 | 586 | 302 | 13 | 99 | 660 | 123 | 690 | 3.51e-131 | 404 |
| Msa1384040 | MtrunA17_Chr6g0480671 | 39.899 | 594 | 322 | 13 | 98 | 673 | 192 | 768 | 6.61e-126 | 393 |
| Msa1384040 | MtrunA17_Chr8g0360821 | 38.380 | 568 | 331 | 10 | 101 | 656 | 64 | 624 | 4.74e-125 | 388 |
| Msa1384040 | MtrunA17_Chr6g0480851 | 39.794 | 583 | 316 | 13 | 99 | 663 | 184 | 749 | 3.91e-122 | 383 |
| Msa1384040 | MtrunA17_Chr6g0480781 | 36.960 | 579 | 331 | 12 | 99 | 659 | 169 | 731 | 7.77e-118 | 372 |
| Msa1384040 | MtrunA17_Chr7g0218341 | 38.542 | 576 | 326 | 11 | 98 | 656 | 108 | 672 | 4.11e-113 | 358 |
| Msa1384040 | MtrunA17_Chr6g0480741 | 35.826 | 575 | 330 | 12 | 98 | 653 | 114 | 668 | 1.62e-100 | 324 |
| Msa1384040 | MtrunA17_Chr2g0318561 | 38.126 | 459 | 254 | 12 | 215 | 656 | 2 | 447 | 4.48e-94 | 301 |
| Msa1384040 | MtrunA17_Chr6g0480681 | 34.043 | 611 | 330 | 19 | 99 | 661 | 115 | 700 | 1.72e-91 | 301 |
| Msa1384040 | MtrunA17_Chr5g0395421 | 38.310 | 355 | 188 | 11 | 297 | 637 | 18 | 355 | 8.85e-60 | 206 |
| Msa1384040 | MtrunA17_Chr2g0326861 | 43.147 | 197 | 106 | 3 | 174 | 368 | 14 | 206 | 8.84e-50 | 174 |
| Msa1384040 | MtrunA17_Chr6g0480771 | 38.492 | 252 | 132 | 6 | 420 | 658 | 12 | 253 | 1.17e-39 | 148 |
| Msa1384040 | MtrunA17_Chr5g0395411 | 36.744 | 215 | 114 | 5 | 99 | 312 | 172 | 365 | 1.33e-36 | 141 |
| Msa1384040 | MtrunA17_Chr6g0480841 | 40.909 | 198 | 97 | 5 | 474 | 658 | 2 | 192 | 3.61e-33 | 127 |
| Msa1384040 | MtrunA17_Chr2g0326851 | 50.382 | 131 | 60 | 4 | 599 | 726 | 3 | 131 | 1.20e-30 | 117 |
| Msa1384040 | MtrunA17_Chr6g0480751 | 32.710 | 214 | 126 | 4 | 4 | 216 | 19 | 215 | 7.10e-26 | 106 |
| Msa1384040 | MtrunA17_Chr6g0480791 | 40.164 | 122 | 72 | 1 | 99 | 219 | 172 | 293 | 3.31e-23 | 100 |
| Msa1384040 | MtrunA17_Chr6g0480821 | 32.919 | 161 | 97 | 6 | 227 | 384 | 37 | 189 | 1.09e-17 | 82.8 |
| Msa1384040 | MtrunA17_Chr2g0318551 | 33.533 | 167 | 92 | 6 | 97 | 259 | 61 | 212 | 4.04e-16 | 78.2 |
| Msa1384040 | MtrunA17_Chr3g0138671 | 22.200 | 491 | 291 | 16 | 91 | 577 | 39 | 442 | 9.29e-16 | 81.3 |
| Msa1384040 | MtrunA17_Chr8g0356081 | 19.533 | 471 | 280 | 11 | 99 | 560 | 40 | 420 | 1.64e-15 | 80.5 |
| Msa1384040 | MtrunA17_Chr6g0480761 | 31.847 | 157 | 95 | 5 | 233 | 384 | 16 | 165 | 2.57e-15 | 75.5 |
| Msa1384040 | MtrunA17_Chr4g0063141 | 25.728 | 206 | 150 | 2 | 373 | 577 | 238 | 441 | 7.61e-15 | 78.6 |
| Msa1384040 | MtrunA17_Chr5g0434371 | 21.385 | 491 | 303 | 16 | 67 | 554 | 49 | 459 | 4.06e-14 | 76.3 |
| Msa1384040 | MtrunA17_Chr2g0277651 | 24.044 | 183 | 138 | 1 | 374 | 556 | 262 | 443 | 1.05e-12 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384040 | AT5G57940.1 | 77.500 | 720 | 156 | 4 | 12 | 728 | 1 | 717 | 0.0 | 1142 |
| Msa1384040 | AT5G57940.2 | 77.500 | 720 | 156 | 4 | 12 | 728 | 1 | 717 | 0.0 | 1142 |
| Msa1384040 | AT5G57940.3 | 76.944 | 720 | 153 | 5 | 12 | 728 | 1 | 710 | 0.0 | 1129 |
| Msa1384040 | AT2G23980.9 | 73.592 | 746 | 180 | 7 | 1 | 729 | 1 | 746 | 0.0 | 1117 |
| Msa1384040 | AT2G23980.10 | 73.592 | 746 | 180 | 7 | 1 | 729 | 1 | 746 | 0.0 | 1117 |
| Msa1384040 | AT2G23980.1 | 73.592 | 746 | 180 | 7 | 1 | 729 | 1 | 746 | 0.0 | 1117 |
| Msa1384040 | AT2G23980.4 | 73.592 | 746 | 180 | 7 | 1 | 729 | 1 | 746 | 0.0 | 1117 |
| Msa1384040 | AT2G23980.5 | 73.592 | 746 | 180 | 7 | 1 | 729 | 1 | 746 | 0.0 | 1117 |
| Msa1384040 | AT2G23980.3 | 71.391 | 769 | 180 | 8 | 1 | 729 | 1 | 769 | 0.0 | 1103 |
| Msa1384040 | AT2G23980.2 | 71.391 | 769 | 180 | 8 | 1 | 729 | 1 | 769 | 0.0 | 1103 |
| Msa1384040 | AT2G23980.8 | 71.391 | 769 | 180 | 8 | 1 | 729 | 1 | 769 | 0.0 | 1103 |
| Msa1384040 | AT2G23980.7 | 71.391 | 769 | 180 | 8 | 1 | 729 | 1 | 769 | 0.0 | 1103 |
| Msa1384040 | AT2G23980.6 | 74.687 | 719 | 168 | 6 | 25 | 729 | 1 | 719 | 0.0 | 1102 |
| Msa1384040 | AT4G30560.1 | 73.352 | 728 | 182 | 5 | 8 | 729 | 10 | 731 | 0.0 | 1099 |
| Msa1384040 | AT4G30560.4 | 73.352 | 728 | 182 | 5 | 8 | 729 | 10 | 731 | 0.0 | 1099 |
| Msa1384040 | AT4G30560.5 | 74.121 | 711 | 172 | 5 | 25 | 729 | 1 | 705 | 0.0 | 1088 |
| Msa1384040 | AT4G30560.2 | 74.121 | 711 | 172 | 5 | 25 | 729 | 1 | 705 | 0.0 | 1088 |
| Msa1384040 | AT4G30560.3 | 74.121 | 711 | 172 | 5 | 25 | 729 | 1 | 705 | 0.0 | 1088 |
| Msa1384040 | AT1G19780.1 | 67.467 | 750 | 218 | 5 | 7 | 731 | 2 | 750 | 0.0 | 1021 |
| Msa1384040 | AT1G15990.1 | 67.160 | 743 | 217 | 9 | 7 | 728 | 2 | 738 | 0.0 | 1002 |
| Msa1384040 | AT5G53130.1 | 56.579 | 684 | 280 | 6 | 55 | 729 | 41 | 716 | 0.0 | 790 |
| Msa1384040 | AT1G01340.2 | 55.733 | 689 | 271 | 9 | 66 | 728 | 26 | 706 | 0.0 | 785 |
| Msa1384040 | AT1G01340.1 | 55.733 | 689 | 271 | 9 | 66 | 728 | 21 | 701 | 0.0 | 784 |
| Msa1384040 | AT4G01010.1 | 55.694 | 641 | 265 | 5 | 94 | 726 | 63 | 692 | 0.0 | 750 |
| Msa1384040 | AT4G01010.2 | 55.694 | 641 | 265 | 5 | 94 | 726 | 63 | 692 | 0.0 | 750 |
| Msa1384040 | AT1G19780.2 | 68.831 | 539 | 145 | 4 | 215 | 731 | 2 | 539 | 0.0 | 750 |
| Msa1384040 | AT2G28260.1 | 53.275 | 687 | 287 | 11 | 49 | 728 | 19 | 678 | 0.0 | 726 |
| Msa1384040 | AT2G28260.2 | 54.476 | 659 | 269 | 9 | 76 | 728 | 5 | 638 | 0.0 | 724 |
| Msa1384040 | AT2G24610.1 | 53.333 | 675 | 275 | 8 | 87 | 729 | 60 | 726 | 0.0 | 716 |
| Msa1384040 | AT2G24610.2 | 53.333 | 675 | 275 | 8 | 87 | 729 | 75 | 741 | 0.0 | 714 |
| Msa1384040 | AT4G30360.1 | 53.625 | 662 | 270 | 10 | 97 | 731 | 69 | 720 | 0.0 | 712 |
| Msa1384040 | AT2G46430.1 | 50.218 | 689 | 319 | 9 | 55 | 730 | 29 | 706 | 0.0 | 709 |
| Msa1384040 | AT2G46430.2 | 50.218 | 689 | 319 | 9 | 55 | 730 | 29 | 706 | 0.0 | 709 |
| Msa1384040 | AT5G14870.1 | 50.075 | 671 | 294 | 8 | 98 | 731 | 39 | 705 | 0.0 | 683 |
| Msa1384040 | AT3G48010.1 | 50.075 | 665 | 292 | 10 | 98 | 725 | 43 | 704 | 0.0 | 675 |
| Msa1384040 | AT2G46440.1 | 46.766 | 603 | 304 | 9 | 97 | 691 | 28 | 621 | 0.0 | 538 |
| Msa1384040 | AT2G46450.4 | 42.812 | 626 | 327 | 10 | 110 | 728 | 40 | 641 | 3.30e-174 | 514 |
| Msa1384040 | AT2G46450.1 | 42.812 | 626 | 327 | 10 | 110 | 728 | 40 | 641 | 3.30e-174 | 514 |
| Msa1384040 | AT2G46450.3 | 41.534 | 626 | 312 | 11 | 110 | 728 | 27 | 605 | 4.56e-164 | 487 |
| Msa1384040 | AT2G46450.2 | 41.315 | 639 | 320 | 12 | 97 | 728 | 28 | 618 | 9.88e-164 | 486 |
| Msa1384040 | AT2G46440.2 | 49.777 | 448 | 212 | 7 | 252 | 691 | 1 | 443 | 5.16e-143 | 426 |
| Msa1384040 | AT3G17690.1 | 38.185 | 584 | 322 | 14 | 99 | 664 | 158 | 720 | 2.45e-126 | 393 |
| Msa1384040 | AT3G17700.1 | 38.986 | 572 | 314 | 14 | 99 | 653 | 192 | 745 | 3.32e-119 | 375 |
| Msa1384040 | AT5G54250.2 | 37.069 | 580 | 332 | 13 | 98 | 656 | 78 | 645 | 1.48e-115 | 364 |
| Msa1384040 | AT5G54250.1 | 37.069 | 580 | 332 | 13 | 98 | 656 | 78 | 645 | 1.48e-115 | 364 |
| Msa1384040 | AT5G54250.4 | 37.069 | 580 | 332 | 13 | 98 | 656 | 78 | 645 | 1.48e-115 | 364 |
| Msa1384040 | AT5G15410.1 | 37.955 | 577 | 338 | 9 | 92 | 653 | 106 | 677 | 9.16e-115 | 363 |
| Msa1384040 | AT5G15410.2 | 37.955 | 577 | 338 | 9 | 92 | 653 | 105 | 676 | 9.52e-115 | 363 |
| Msa1384040 | AT3G17690.2 | 38.586 | 495 | 275 | 10 | 99 | 584 | 158 | 632 | 6.87e-113 | 355 |
| Msa1384040 | AT5G54250.3 | 36.379 | 580 | 331 | 14 | 98 | 656 | 78 | 640 | 7.51e-110 | 349 |
| Msa1384040 | AT3G17700.2 | 39.157 | 498 | 280 | 11 | 99 | 591 | 192 | 671 | 2.96e-107 | 342 |
| Msa1384040 | AT3G17690.3 | 36.031 | 383 | 223 | 8 | 88 | 461 | 147 | 516 | 9.92e-75 | 251 |
| Msa1384040 | AT3G02850.2 | 21.368 | 468 | 286 | 15 | 94 | 558 | 69 | 457 | 5.48e-17 | 85.9 |
| Msa1384040 | AT3G02850.1 | 21.627 | 467 | 286 | 14 | 94 | 558 | 69 | 457 | 7.01e-17 | 85.5 |
| Msa1384040 | AT3G02850.3 | 21.368 | 468 | 286 | 15 | 94 | 558 | 69 | 457 | 1.12e-16 | 84.7 |
| Msa1384040 | AT2G26650.1 | 19.672 | 488 | 288 | 10 | 99 | 577 | 49 | 441 | 3.19e-16 | 83.6 |
| Msa1384040 | AT5G37500.1 | 21.692 | 461 | 281 | 14 | 97 | 556 | 55 | 436 | 1.03e-14 | 78.6 |
| Msa1384040 | AT5G37500.2 | 21.692 | 461 | 281 | 14 | 97 | 556 | 55 | 436 | 1.16e-14 | 78.6 |
| Msa1384040 | AT5G37500.4 | 21.475 | 461 | 282 | 14 | 97 | 556 | 55 | 436 | 1.59e-14 | 77.8 |
| Msa1384040 | AT5G37500.3 | 22.103 | 466 | 273 | 16 | 95 | 556 | 3 | 382 | 5.27e-13 | 73.2 |
| Msa1384040 | AT4G22200.2 | 22.995 | 187 | 143 | 1 | 374 | 560 | 263 | 448 | 1.85e-12 | 71.2 |
| Msa1384040 | AT4G22200.1 | 22.995 | 187 | 143 | 1 | 374 | 560 | 263 | 448 | 3.94e-12 | 70.5 |
| Msa1384040 | AT5G46240.1 | 22.000 | 200 | 155 | 1 | 373 | 572 | 245 | 443 | 1.21e-11 | 68.6 |
| Msa1384040 | AT2G26650.2 | 20.250 | 400 | 232 | 8 | 187 | 577 | 15 | 336 | 2.05e-11 | 68.2 |
| Msa1384040 | AT4G32650.2 | 23.913 | 184 | 139 | 1 | 375 | 558 | 276 | 458 | 6.22e-11 | 66.2 |
| Msa1384040 | AT4G32650.3 | 23.913 | 184 | 139 | 1 | 375 | 558 | 276 | 458 | 7.30e-11 | 66.2 |
| Msa1384040 | AT4G32650.1 | 23.913 | 184 | 139 | 1 | 375 | 558 | 276 | 458 | 7.43e-11 | 66.2 |
Find 190 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATATCTTTACTGTTTA+TGG | 0.022733 | tig0020633:-80652 | Msa1384040:CDS |
| CAATTGTAATATTGAAATTA+TGG | 0.130935 | tig0020633:-77832 | Msa1384040:three_prime_UTR |
| GCTCCATCATCTCGTGTCTT+TGG | 0.178515 | tig0020633:-82265 | Msa1384040:CDS |
| ACACGCTCTCTAAGCTCTTT+TGG | 0.222016 | tig0020633:+79349 | None:intergenic |
| CTCTTAAGTTCTGAAGTTAA+TGG | 0.232977 | tig0020633:+81178 | None:intergenic |
| ATTATGGGTTGGAAGAATTA+AGG | 0.233547 | tig0020633:-77816 | Msa1384040:three_prime_UTR |
| GCCTAACTGGCTGTCATATT+AGG | 0.256859 | tig0020633:-77888 | Msa1384040:three_prime_UTR |
| CTCCATCATCTCGTGTCTTT+GGG | 0.266985 | tig0020633:-82264 | Msa1384040:CDS |
| TCTGAAGGACTGAAATTAAT+TGG | 0.268732 | tig0020633:-82586 | Msa1384040:CDS |
| TCAGACACTTTAAGATCTTC+TGG | 0.270701 | tig0020633:+82526 | None:intergenic |
| CAATGTAAGCCGTGCGAAAT+TGG | 0.274977 | tig0020633:+82287 | None:intergenic |
| GATGTCAGAGTTACAAAATC+TGG | 0.296654 | tig0020633:-82691 | Msa1384040:CDS |
| TATGACTGAACTTGTGAAAA+AGG | 0.303288 | tig0020633:-77960 | Msa1384040:three_prime_UTR |
| GGTTCCACTATTTGAGAGTA+TGG | 0.306379 | tig0020633:-78695 | Msa1384040:CDS |
| TCAATAGCACTTGCCATATC+AGG | 0.329052 | tig0020633:-80026 | Msa1384040:CDS |
| GGCAAACTTTGAGGCTAATA+AGG | 0.330312 | tig0020633:+78141 | None:intergenic |
| ATCCTCTTCGCGCTTCTGAT+TGG | 0.344987 | tig0020633:-79999 | Msa1384040:CDS |
| CAGAGAATACTTATATTGTT+CGG | 0.346563 | tig0020633:-78621 | Msa1384040:CDS |
| CAATGATGAATTACACTGTC+TGG | 0.350794 | tig0020633:-82389 | Msa1384040:CDS |
| AGCACCCGCCCATGCAGTTT+CGG | 0.362208 | tig0020633:+81138 | None:intergenic |
| AAATTAATTACCTTAAATTC+TGG | 0.365686 | tig0020633:+80621 | None:intergenic |
| TTTCAGCTCATCGGCGGTTA+AGG | 0.369784 | tig0020633:+78378 | None:intergenic |
| TAGTATACATTAAGCCTAAC+TGG | 0.380548 | tig0020633:-77901 | Msa1384040:three_prime_UTR |
| ACTGATTATTTGCAGATAGT+TGG | 0.381899 | tig0020633:-80926 | Msa1384040:intron |
| AATTGTAATATTGAAATTAT+GGG | 0.384376 | tig0020633:-77831 | Msa1384040:three_prime_UTR |
| GATCCTTCCTCCTTGTTGTT+CGG | 0.392824 | tig0020633:-84136 | Msa1384040:five_prime_UTR |
| CACCAACTCCCTGGCAGTCT+TGG | 0.398928 | tig0020633:+78081 | None:intergenic |
| TGACTATTATTGCCAACTTT+CGG | 0.399473 | tig0020633:+82359 | None:intergenic |
| ATCTTTACTGTTTATGGTGG+GGG | 0.405257 | tig0020633:-80646 | Msa1384040:CDS |
| ATCATCTCGTGTCTTTGGGC+GGG | 0.405515 | tig0020633:-82260 | Msa1384040:CDS |
| CTTGTAATCAGATTGTTGTT+TGG | 0.406927 | tig0020633:-81303 | Msa1384040:intron |
| TCACTGCAGTACCCTTGGTC+AGG | 0.408201 | tig0020633:-80087 | Msa1384040:intron |
| ATATCTCTTCGAAGATCCTT+TGG | 0.408228 | tig0020633:+79256 | None:intergenic |
| TATTAAGCGTCATCTCTGTT+TGG | 0.412230 | tig0020633:-79236 | Msa1384040:CDS |
| CTCTCATTTCCTCCAGCCTA+AGG | 0.417185 | tig0020633:+79416 | None:intergenic |
| ATGAAAAGCATCTCATCAAC+TGG | 0.418687 | tig0020633:+78589 | None:intergenic |
| TTTAAGCAAGCCTTGTCATC+TGG | 0.423538 | tig0020633:-80701 | Msa1384040:CDS |
| TGGAAGATTAGAACCAGATC+TGG | 0.424177 | tig0020633:+78447 | None:intergenic |
| GGTACCATTCGAAGAAATCT+AGG | 0.424271 | tig0020633:+81199 | None:intergenic |
| TAGAACCAGATCTGGGGTCC+AGG | 0.433905 | tig0020633:+78455 | None:intergenic |
| ATCGACTCGCCAAGACTGCC+AGG | 0.437488 | tig0020633:-78090 | Msa1384040:CDS |
| AGAGAATACTTATATTGTTC+GGG | 0.441039 | tig0020633:-78620 | Msa1384040:CDS |
| ATCTGTGTTGCCAGTACCAC+AGG | 0.445249 | tig0020633:-82167 | Msa1384040:intron |
| CACTATAACCTTCCGTGTGC+TGG | 0.445320 | tig0020633:+80804 | None:intergenic |
| TGGGCCCTGGACCCCAGATC+TGG | 0.448919 | tig0020633:-78460 | Msa1384040:CDS |
| ACCTAATATGACAGCCAGTT+AGG | 0.451204 | tig0020633:+77887 | None:intergenic |
| CGCCCAAAGACACGAGATGA+TGG | 0.455061 | tig0020633:+82262 | None:intergenic |
| GTGTCTTTGCCGAAACTGCA+TGG | 0.456842 | tig0020633:-81147 | Msa1384040:CDS |
| TTTCAACCGCACATATCTAA+AGG | 0.457653 | tig0020633:-78515 | Msa1384040:CDS |
| TCAGTCCCTTACCCTTAGGC+TGG | 0.460097 | tig0020633:-79428 | Msa1384040:CDS |
| TAATAAGGCGGCACCAAGGC+TGG | 0.460595 | tig0020633:+78156 | None:intergenic |
| GAAGAGGATGAGACCTGATA+TGG | 0.460796 | tig0020633:+80013 | None:intergenic |
| TGCTTTCTATTTGCTAAACA+TGG | 0.461201 | tig0020633:-82314 | Msa1384040:CDS |
| AAATTAATTGGTCGATCACT+TGG | 0.464219 | tig0020633:-82574 | Msa1384040:CDS |
| AACGGCAGTTCCTCCAGCCT+TGG | 0.469815 | tig0020633:-78169 | Msa1384040:CDS |
| TTTCCTCCAGCCTAAGGGTA+AGG | 0.471966 | tig0020633:+79422 | None:intergenic |
| TCATCCATACTCTCAAATAG+TGG | 0.476542 | tig0020633:+78691 | None:intergenic |
| TCTGCTGTAAAGTCAGGCTC+AGG | 0.479099 | tig0020633:+78043 | None:intergenic |
| ACTCTCAACAATGGAGAACC+TGG | 0.480377 | tig0020633:-78294 | Msa1384040:CDS |
| CATCATCTCGTGTCTTTGGG+CGG | 0.483109 | tig0020633:-82261 | Msa1384040:CDS |
| TCATCTCGTGTCTTTGGGCG+GGG | 0.485159 | tig0020633:-82259 | Msa1384040:CDS |
| TGGTTTCAGTCTCTCACATA+TGG | 0.485163 | tig0020633:+78654 | None:intergenic |
| TTACTTCACTGCAGTACCCT+TGG | 0.485316 | tig0020633:-80092 | Msa1384040:intron |
| CTGTTTGGCTTTAGTGAGGA+GGG | 0.485661 | tig0020633:-79221 | Msa1384040:intron |
| CGCCAAGACTGCCAGGGAGT+TGG | 0.489302 | tig0020633:-78083 | Msa1384040:CDS |
| AATTGGTCGATCACTTGGAC+TGG | 0.493849 | tig0020633:-82569 | Msa1384040:CDS |
| ATATCTTTACTGTTTATGGT+GGG | 0.494622 | tig0020633:-80648 | Msa1384040:CDS |
| TTGGTCGATCACTTGGACTG+GGG | 0.495877 | tig0020633:-82567 | Msa1384040:CDS |
| GGGCGAGCTTGTGATAGATT+CGG | 0.504640 | tig0020633:-82239 | Msa1384040:CDS |
| TAGCAAATAGAAAGCATCAA+TGG | 0.505414 | tig0020633:+82321 | None:intergenic |
| GCATCATCTGCTGTAAAGTC+AGG | 0.505947 | tig0020633:+78037 | None:intergenic |
| ACACGGAAGGTTATAGTGCC+TGG | 0.506802 | tig0020633:-80799 | Msa1384040:CDS |
| TTCAAACTAGCACATATCCT+GGG | 0.507377 | tig0020633:-80061 | Msa1384040:CDS |
| TCAGAACTTAAGAGAACAGC+TGG | 0.509746 | tig0020633:-81169 | Msa1384040:CDS |
| CTTCAAACTAGCACATATCC+TGG | 0.511018 | tig0020633:-80062 | Msa1384040:CDS |
| TATCTTTACTGTTTATGGTG+GGG | 0.514479 | tig0020633:-80647 | Msa1384040:CDS |
| AATATCTTTACTGTTTATGG+TGG | 0.516798 | tig0020633:-80649 | Msa1384040:CDS |
| TAGACGTCTTCACAGTAGAC+AGG | 0.517455 | tig0020633:-78338 | Msa1384040:CDS |
| TTGAATAAAACAAGCAGCCC+AGG | 0.520184 | tig0020633:+78276 | None:intergenic |
| GGAAGATTAGAACCAGATCT+GGG | 0.521641 | tig0020633:+78448 | None:intergenic |
| GTAATATTGAAATTATGGGT+TGG | 0.523418 | tig0020633:-77827 | Msa1384040:three_prime_UTR |
| ATCTTCAGTCCCTTACCCTT+AGG | 0.524427 | tig0020633:-79432 | Msa1384040:CDS |
| TAAAGGAGGCTGAGTTCTGT+GGG | 0.524904 | tig0020633:-78498 | Msa1384040:CDS |
| ATTGGTCGATCACTTGGACT+GGG | 0.525084 | tig0020633:-82568 | Msa1384040:CDS |
| AAATTAAACCATGGTAGTCA+TGG | 0.526709 | tig0020633:-82655 | Msa1384040:CDS |
| CACTGCAGTACCCTTGGTCA+GGG | 0.528148 | tig0020633:-80086 | Msa1384040:intron |
| TCTGTTTGGCTTTAGTGAGG+AGG | 0.529031 | tig0020633:-79222 | Msa1384040:CDS |
| AGTGCGCGCGGCAAACTTTG+AGG | 0.530370 | tig0020633:+78132 | None:intergenic |
| CTAATCTTCCAACCTCTACT+CGG | 0.532003 | tig0020633:-78435 | Msa1384040:CDS |
| CTTTGCCGAAACTGCATGGG+CGG | 0.533622 | tig0020633:-81143 | Msa1384040:CDS |
| GGAATGAGAAAGGGATCTGA+AGG | 0.534084 | tig0020633:-82601 | Msa1384040:CDS |
| AGAATGCTTGCCGTGACAAT+GGG | 0.537644 | tig0020633:-80856 | Msa1384040:CDS |
| ACAGTTTCTCTCTCTCTATG+AGG | 0.539148 | tig0020633:-84031 | Msa1384040:intron |
| TTGTAATTTCACCAACTCCC+TGG | 0.539371 | tig0020633:+78072 | None:intergenic |
| CAGAATGCTTGCCGTGACAA+TGG | 0.542017 | tig0020633:-80857 | Msa1384040:CDS |
| TTGTTTGGAGATTTCTTCAG+AGG | 0.547801 | tig0020633:-81288 | Msa1384040:CDS |
| TTCCTCCAGCCTAAGGGTAA+GGG | 0.548812 | tig0020633:+79423 | None:intergenic |
| TGTCTTTGCCGAAACTGCAT+GGG | 0.548973 | tig0020633:-81146 | Msa1384040:CDS |
| TTCAATATTACAATTGACAA+CGG | 0.549917 | tig0020633:+77839 | None:intergenic |
| AATTATGAAGCTTCGTCAGA+AGG | 0.551043 | tig0020633:-78224 | Msa1384040:CDS |
| ATCTCTGTTTGGCTTTAGTG+AGG | 0.554542 | tig0020633:-79225 | Msa1384040:CDS |
| ACCACAGATGGTGGGAGGAG+TGG | 0.554774 | tig0020633:-78541 | Msa1384040:CDS |
| TGATTACAAATCACAGTACA+TGG | 0.555003 | tig0020633:-83027 | Msa1384040:CDS |
| ATGGAAGCAGCACAACCTCT+AGG | 0.556003 | tig0020633:-82636 | Msa1384040:CDS |
| TGTAATTCATCATTGATGAC+AGG | 0.556688 | tig0020633:+82397 | None:intergenic |
| GCTTCTGATTGGCAACATGC+AGG | 0.559066 | tig0020633:-79988 | Msa1384040:intron |
| GTCCCTTACCCTTAGGCTGG+AGG | 0.561500 | tig0020633:-79425 | Msa1384040:CDS |
| GGCAACAAATTTCAGCTCAT+CGG | 0.562924 | tig0020633:+78369 | None:intergenic |
| AATGATGAATTACACTGTCT+GGG | 0.563593 | tig0020633:-82388 | Msa1384040:CDS |
| ACCTAAAAGAACTTTCTCGC+TGG | 0.565973 | tig0020633:+83000 | None:intergenic |
| CTGCTGTAAAGTCAGGCTCA+GGG | 0.566862 | tig0020633:+78044 | None:intergenic |
| AGCATCAATGGCTGTCCTCA+AGG | 0.567403 | tig0020633:+82333 | None:intergenic |
| CTTGAGAGTGTTACCACAGA+TGG | 0.567620 | tig0020633:-78553 | Msa1384040:CDS |
| GTGGTACTGGCAACACAGAT+AGG | 0.568795 | tig0020633:+82170 | None:intergenic |
| TTCACAGTCCGAGTAGAGGT+TGG | 0.569798 | tig0020633:+78427 | None:intergenic |
| CGCCTTCACAGTCCGAGTAG+AGG | 0.572148 | tig0020633:+78423 | None:intergenic |
| TTGAACGCAATGACTCATGC+TGG | 0.573357 | tig0020633:-80880 | Msa1384040:CDS |
| AACAAATTTCAGCTCATCGG+CGG | 0.575197 | tig0020633:+78372 | None:intergenic |
| TATTCCTAGATTTCTTCGAA+TGG | 0.576328 | tig0020633:-81203 | Msa1384040:CDS |
| TGGAGGAAATGAGAGTCAAA+AGG | 0.578064 | tig0020633:-79408 | Msa1384040:CDS |
| ATTGAAAAGATAACCTCCCC+AGG | 0.578411 | tig0020633:+80044 | None:intergenic |
| CTAAAGGAGGCTGAGTTCTG+TGG | 0.580756 | tig0020633:-78499 | Msa1384040:CDS |
| AATACTTATATTGTTCGGGA+AGG | 0.582365 | tig0020633:-78616 | Msa1384040:CDS |
| TTTGCCGAAACTGCATGGGC+GGG | 0.583820 | tig0020633:-81142 | Msa1384040:CDS |
| AGTTTGAAGCCCCTGACCAA+GGG | 0.585386 | tig0020633:+80076 | None:intergenic |
| GTCAAACATCTTTCAACAGT+AGG | 0.587623 | tig0020633:+83055 | None:intergenic |
| ATTCCATAATCAAAAGGTGG+AGG | 0.588062 | tig0020633:+80725 | None:intergenic |
| ACCACTCCTCCCACCATCTG+TGG | 0.589869 | tig0020633:+78540 | None:intergenic |
| GTATGATCAATATAAGTGGT+TGG | 0.589892 | tig0020633:-79320 | Msa1384040:CDS |
| AGAACCAGATCTGGGGTCCA+GGG | 0.590157 | tig0020633:+78456 | None:intergenic |
| TCTCATTTCCTCCAGCCTAA+GGG | 0.590500 | tig0020633:+79417 | None:intergenic |
| TGGTCGATCACTTGGACTGG+GGG | 0.590891 | tig0020633:-82566 | Msa1384040:CDS |
| CATGGCTCTCCAATTTCGCA+CGG | 0.593225 | tig0020633:-82296 | Msa1384040:CDS |
| GAGAGTGTTACCACAGATGG+TGG | 0.593359 | tig0020633:-78550 | Msa1384040:CDS |
| TATAATACAATTATTTACAA+AGG | 0.594456 | tig0020633:+77922 | None:intergenic |
| GGCGGTATGATCAATATAAG+TGG | 0.596596 | tig0020633:-79324 | Msa1384040:CDS |
| GTGAAGACGTCTAAACTGAC+TGG | 0.596611 | tig0020633:+78348 | None:intergenic |
| AAGAGCTTAGAGAGCGTGTG+AGG | 0.598434 | tig0020633:-79345 | Msa1384040:CDS |
| GTATTCTCTGTAAATAAACA+TGG | 0.598980 | tig0020633:+78634 | None:intergenic |
| TAGTTTGAAGCCCCTGACCA+AGG | 0.599761 | tig0020633:+80075 | None:intergenic |
| TTTAGTTCAGAGTCTACCAA+AGG | 0.600713 | tig0020633:-79272 | Msa1384040:CDS |
| ACGGTAAATAAGTTACATGC+TGG | 0.600732 | tig0020633:+77858 | None:intergenic |
| TACAAATCACAGTACATGGA+TGG | 0.601736 | tig0020633:-83023 | Msa1384040:CDS |
| ACTGCAGTACCCTTGGTCAG+GGG | 0.604670 | tig0020633:-80085 | Msa1384040:intron |
| CAGTCTTGGCGAGTCGATTG+CGG | 0.604942 | tig0020633:+78095 | None:intergenic |
| GCACCGAACAACAAGGAGGA+AGG | 0.608922 | tig0020633:+84133 | None:intergenic |
| GCTGTAAAGTCAGGCTCAGG+GGG | 0.609315 | tig0020633:+78046 | None:intergenic |
| TCAGAAGGAAGTCACGGCAA+CGG | 0.612473 | tig0020633:-78187 | Msa1384040:CDS |
| TGCTGCTTCCATGACTACCA+TGG | 0.616363 | tig0020633:+82647 | None:intergenic |
| AAAATTCCATAATCAAAAGG+TGG | 0.620323 | tig0020633:+80722 | None:intergenic |
| TCTGGGTATAGACCGAAAGT+TGG | 0.620416 | tig0020633:-82371 | Msa1384040:CDS |
| TGTGAGAACCAGCACACGGA+AGG | 0.621184 | tig0020633:-80812 | Msa1384040:CDS |
| AGCTTAGAGAGCGTGTGAGG+CGG | 0.621829 | tig0020633:-79342 | Msa1384040:CDS |
| CAGCCTCCTTTAGATATGTG+CGG | 0.623629 | tig0020633:+78509 | None:intergenic |
| AGTATTGATAAATTAAACCA+TGG | 0.625061 | tig0020633:-82664 | Msa1384040:CDS |
| TGATGTACTAGCAACAAAGC+AGG | 0.625485 | tig0020633:-81254 | Msa1384040:CDS |
| TGCTGTAAAGTCAGGCTCAG+GGG | 0.626056 | tig0020633:+78045 | None:intergenic |
| GAAGAAGCGGATGAGTCAGA+AGG | 0.626874 | tig0020633:-78202 | Msa1384040:CDS |
| AACCTCTACTCGGACTGTGA+AGG | 0.629479 | tig0020633:-78425 | Msa1384040:CDS |
| GTAAATAAGTTACATGCTGG+TGG | 0.631706 | tig0020633:+77861 | None:intergenic |
| CTCTCAACAATGGAGAACCT+GGG | 0.633749 | tig0020633:-78293 | Msa1384040:CDS |
| CAACCGCACATATCTAAAGG+AGG | 0.635378 | tig0020633:-78512 | Msa1384040:CDS |
| GCTTCGTCAGAAGGAAGAAG+CGG | 0.637094 | tig0020633:-78215 | Msa1384040:CDS |
| AAAGGCGTGATTCAGAACAA+TGG | 0.640001 | tig0020633:-79390 | Msa1384040:CDS |
| TGAAATGATACCAGATGACA+AGG | 0.640327 | tig0020633:+80691 | None:intergenic |
| GATGAGTCAGAAGGAAGTCA+CGG | 0.642746 | tig0020633:-78193 | Msa1384040:CDS |
| TCGACTCGCCAAGACTGCCA+GGG | 0.646113 | tig0020633:-78089 | Msa1384040:CDS |
| CAATAATAGTCACCACCTTG+AGG | 0.647111 | tig0020633:-82348 | Msa1384040:CDS |
| TATAAGTGGTTGGCAACACG+TGG | 0.647524 | tig0020633:-79310 | Msa1384040:CDS |
| TGCCAATCAGAAGCGCGAAG+AGG | 0.647772 | tig0020633:+79997 | None:intergenic |
| GGAGGCTGAGTTCTGTGGGG+AGG | 0.650785 | tig0020633:-78494 | Msa1384040:CDS |
| AAACTTTGAGGCTAATAAGG+CGG | 0.650978 | tig0020633:+78144 | None:intergenic |
| TACACCACGGAGAGTGCGCG+CGG | 0.651777 | tig0020633:+78120 | None:intergenic |
| ACTGTGATTTGTAATCACTT+CGG | 0.652558 | tig0020633:+83033 | None:intergenic |
| AACTAGCACATATCCTGGGG+AGG | 0.659235 | tig0020633:-80057 | Msa1384040:CDS |
| AAACTCTGCACCGAACAACA+AGG | 0.661797 | tig0020633:+84126 | None:intergenic |
| GACTGTGAAGGCGTTAACAG+AGG | 0.662573 | tig0020633:-78413 | Msa1384040:CDS |
| AGGCTAATAAGGCGGCACCA+AGG | 0.669575 | tig0020633:+78152 | None:intergenic |
| AGAGTGTTACCACAGATGGT+GGG | 0.670648 | tig0020633:-78549 | Msa1384040:CDS |
| AAGCAAGATAATGAACAGCA+AGG | 0.671349 | tig0020633:+81231 | None:intergenic |
| GTCGATTGCGGTGTACACCA+CGG | 0.672348 | tig0020633:+78107 | None:intergenic |
| GTGTTACCACAGATGGTGGG+AGG | 0.679578 | tig0020633:-78546 | Msa1384040:CDS |
| ATCAATGGCTGTCCTCAAGG+TGG | 0.685135 | tig0020633:+82336 | None:intergenic |
| AAACAGTGGATCCACAAACA+CGG | 0.686841 | tig0020633:+82429 | None:intergenic |
| TCAAACTAGCACATATCCTG+GGG | 0.691393 | tig0020633:-80060 | Msa1384040:CDS |
| GTATTGTGAGAACCAGCACA+CGG | 0.712309 | tig0020633:-80816 | Msa1384040:CDS |
| GAAGATTAGAACCAGATCTG+GGG | 0.716370 | tig0020633:+78449 | None:intergenic |
| TGAAAGTGAAGTTGAAGTTG+CGG | 0.721956 | tig0020633:+84054 | None:intergenic |
| CTCTGCACCGAACAACAAGG+AGG | 0.732981 | tig0020633:+84129 | None:intergenic |
| AAAGGAGGCTGAGTTCTGTG+GGG | 0.741818 | tig0020633:-78497 | Msa1384040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTAAAGCAATTAAAT+TGG | + | tig0020633:77967-77986 | None:intergenic | 10.0% |
| !!! | TTTAATTGCTTTAATTTTAA+TGG | - | tig0020633:77968-77987 | Msa1384040:three_prime_UTR | 10.0% |
| !! | ATAACAAAAACAAAAAAAAA+TGG | + | tig0020633:78114-78133 | None:intergenic | 10.0% |
| !!! | TGTATGTATATTTTTATTTT+TGG | - | tig0020633:78215-78234 | Msa1384040:CDS | 10.0% |
| !!! | GAATGTTTTTTTTTTTTTTT+TGG | - | tig0020633:79984-80003 | Msa1384040:intron | 10.0% |
| !!! | ATGTTTTTTTTTTTTTTTTG+GGG | - | tig0020633:79986-80005 | Msa1384040:intron | 10.0% |
| !!! | TCTTATAAATTTTTCTAATA+TGG | - | tig0020633:80205-80224 | Msa1384040:intron | 10.0% |
| !! | TATAATACAATTATTTACAA+AGG | + | tig0020633:84033-84052 | None:intergenic | 10.0% |
| !! | AATTGTAATATTGAAATTAT+GGG | - | tig0020633:84121-84140 | Msa1384040:five_prime_UTR | 10.0% |
| !! | TAAATTATTTCATGATCATA+AGG | - | tig0020633:78183-78202 | Msa1384040:CDS | 15.0% |
| !! | ATAGTAGATTTATTTACATA+TGG | - | tig0020633:78646-78665 | Msa1384040:CDS | 15.0% |
| !! | TAGTAGATTTATTTACATAT+GGG | - | tig0020633:78647-78666 | Msa1384040:CDS | 15.0% |
| !!! | CTTTTTCATTTTTTTTTTCT+AGG | - | tig0020633:79202-79221 | Msa1384040:intron | 15.0% |
| !!! | TGTTTTTTTTTTTTTTTTGG+GGG | - | tig0020633:79987-80006 | Msa1384040:intron | 15.0% |
| !! | AAAATTATTGAGCTAAAAAT+AGG | + | tig0020633:80289-80308 | None:intergenic | 15.0% |
| !! | AGAATATAAAAAGAAAACAA+AGG | + | tig0020633:80631-80650 | None:intergenic | 15.0% |
| !! | TTAAAAATTCCATAATCAAA+AGG | + | tig0020633:81236-81255 | None:intergenic | 15.0% |
| !! | AAATTAATTACCTTAAATTC+TGG | + | tig0020633:81334-81353 | None:intergenic | 15.0% |
| !! | TAAGAAATATGATAAAATAG+AGG | - | tig0020633:82049-82068 | Msa1384040:intron | 15.0% |
| !! | ATATATTATAAATGTTACTG+AGG | - | tig0020633:82470-82489 | Msa1384040:CDS | 15.0% |
| !!! | TTTTCTACTGTAAAAATATT+TGG | + | tig0020633:82849-82868 | None:intergenic | 15.0% |
| !!! | AATTCATTAACTTATTTTCA+TGG | - | tig0020633:83227-83246 | Msa1384040:intron | 15.0% |
| !! | CAATTGTAATATTGAAATTA+TGG | - | tig0020633:84120-84139 | Msa1384040:five_prime_UTR | 15.0% |
| !!! | TTTTTTTGTGATTTGAGATT+AGG | - | tig0020633:77794-77813 | Msa1384040:three_prime_UTR | 20.0% |
| !! | ATGGTTTAGATGATTAATAT+TGG | - | tig0020633:78292-78311 | Msa1384040:CDS | 20.0% |
| !!! | ATCACAGCATTTTTTTTTTT+GGG | + | tig0020633:78553-78572 | None:intergenic | 20.0% |
| !! | AATAAATCTACTATATAACG+TGG | + | tig0020633:78640-78659 | None:intergenic | 20.0% |
| !! | GAATAATTTAAAGAATGACA+TGG | + | tig0020633:78722-78741 | None:intergenic | 20.0% |
| !! | TGCAATACTATAAATATTGT+TGG | - | tig0020633:78825-78844 | Msa1384040:intron | 20.0% |
| !!! | TTTCATTTTTTTTTTCTAGG+TGG | - | tig0020633:79205-79224 | Msa1384040:intron | 20.0% |
| !!! | TTCATTTTTTTTTTCTAGGT+GGG | - | tig0020633:79206-79225 | Msa1384040:intron | 20.0% |
| !!! | AGTATTGATAAATTAAACCA+TGG | - | tig0020633:79288-79307 | Msa1384040:CDS | 20.0% |
| !!! | TTTTAAAAAAGGAATGAGAA+AGG | - | tig0020633:79341-79360 | Msa1384040:CDS | 20.0% |
| !! | TTTAAAAAAGGAATGAGAAA+GGG | - | tig0020633:79342-79361 | Msa1384040:CDS | 20.0% |
| !! | TAAGAGTAAAAATTTGTCTT+GGG | + | tig0020633:79469-79488 | None:intergenic | 20.0% |
| !! | ATAAGAGTAAAAATTTGTCT+TGG | + | tig0020633:79470-79489 | None:intergenic | 20.0% |
| !!! | AAGACAAATTTTTACTCTTA+TGG | - | tig0020633:79469-79488 | Msa1384040:intron | 20.0% |
| !!! | GTTTTTTTTTTTTTTTTGGG+GGG | - | tig0020633:79988-80007 | Msa1384040:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTTTGGGG+GGG | - | tig0020633:79989-80008 | Msa1384040:CDS | 20.0% |
| !! | AAGAATAAGTGCAATAAAAT+TGG | - | tig0020633:80065-80084 | Msa1384040:CDS | 20.0% |
| !!! | TGATTTGAAACTATTGAAAT+TGG | - | tig0020633:80176-80195 | Msa1384040:intron | 20.0% |
| !!! | GATTTGAAACTATTGAAATT+GGG | - | tig0020633:80177-80196 | Msa1384040:intron | 20.0% |
| !!! | ATTTGAAACTATTGAAATTG+GGG | - | tig0020633:80178-80197 | Msa1384040:intron | 20.0% |
| !!! | TTAGTATAAATGATGCTTTT+TGG | - | tig0020633:80337-80356 | Msa1384040:intron | 20.0% |
| !!! | TAGTATAAATGATGCTTTTT+GGG | - | tig0020633:80338-80357 | Msa1384040:intron | 20.0% |
| !!! | AAGTAAGAAAGAAGTATTTT+TGG | + | tig0020633:80513-80532 | None:intergenic | 20.0% |
| !! | TTAAAATTACAGTAGCAATA+AGG | + | tig0020633:80583-80602 | None:intergenic | 20.0% |
| !!! | TTATTGCTACTGTAATTTTA+AGG | - | tig0020633:80582-80601 | Msa1384040:intron | 20.0% |
| !!! | ATATTTTGTGATGAATTTCT+TGG | + | tig0020633:81288-81307 | None:intergenic | 20.0% |
| !! | CAAAATATCTTTACTGTTTA+TGG | - | tig0020633:81300-81319 | Msa1384040:intron | 20.0% |
| !! | TATTTAATAGACCATATCAA+TGG | - | tig0020633:81588-81607 | Msa1384040:intron | 20.0% |
| !! | ACAAATAATCAATGAAATCA+CGG | + | tig0020633:81820-81839 | None:intergenic | 20.0% |
| !! | AAATATAGCAATTGTGAATA+TGG | + | tig0020633:82114-82133 | None:intergenic | 20.0% |
| !! | TAGAGATATCATGTATAAAT+AGG | + | tig0020633:82164-82183 | None:intergenic | 20.0% |
| !!! | ATATTTAAGTTTCTGTGTTA+TGG | - | tig0020633:82326-82345 | Msa1384040:CDS | 20.0% |
| !! | AAAAATATTTGGTCCTTTAT+CGG | + | tig0020633:82838-82857 | None:intergenic | 20.0% |
| !!! | TTTGCTTTTCAAATTCTTTT+TGG | - | tig0020633:83039-83058 | Msa1384040:CDS | 20.0% |
| !! | TTCAATATTACAATTGACAA+CGG | + | tig0020633:84116-84135 | None:intergenic | 20.0% |
| !!! | ATTAAGGTTGATTTTATTTG+TGG | - | tig0020633:84152-84171 | Msa1384040:five_prime_UTR | 20.0% |
| !!! | TCACAGCATTTTTTTTTTTG+GGG | + | tig0020633:78552-78571 | None:intergenic | 25.0% |
| !!! | CATCACAGCATTTTTTTTTT+TGG | + | tig0020633:78554-78573 | None:intergenic | 25.0% |
| ! | CAAAAAAAAAAATGCTGTGA+TGG | - | tig0020633:78552-78571 | Msa1384040:CDS | 25.0% |
| ! | AGTAATAAACTAGCAACTTT+AGG | - | tig0020633:78591-78610 | Msa1384040:CDS | 25.0% |
| !!! | CAACTTTAGGTTCATTTTTA+TGG | - | tig0020633:78604-78623 | Msa1384040:CDS | 25.0% |
| !!! | AATGTTTACTAAAAGCATCA+TGG | + | tig0020633:78785-78804 | None:intergenic | 25.0% |
| !! | TGATGCTTTTAGTAAACATT+CGG | - | tig0020633:78785-78804 | Msa1384040:intron | 25.0% |
| ! | TTATAGTATTGCATTCTTCA+TGG | + | tig0020633:78818-78837 | None:intergenic | 25.0% |
| ! | ACATTGCAACGAAAATATAT+TGG | + | tig0020633:78980-78999 | None:intergenic | 25.0% |
| ! | TAATATTCCTGTTTATGAAC+CGG | - | tig0020633:79141-79160 | Msa1384040:intron | 25.0% |
| ! | AAGAGTAAAAATTTGTCTTG+GGG | + | tig0020633:79468-79487 | None:intergenic | 25.0% |
| ! | AATCGTACAGTATTTACAAA+AGG | + | tig0020633:79842-79861 | None:intergenic | 25.0% |
| !!! | CTGTACGATTATTTTTTCTT+CGG | - | tig0020633:79852-79871 | Msa1384040:intron | 25.0% |
| !!! | TTTTTTTTTTTTTTTGGGGG+GGG | - | tig0020633:79990-80009 | Msa1384040:CDS | 25.0% |
| ! | GGAGAATATAATATCATACT+TGG | - | tig0020633:80086-80105 | Msa1384040:intron | 25.0% |
| ! | AGTTTCAAATCAAAGAAAAC+AGG | + | tig0020633:80168-80187 | None:intergenic | 25.0% |
| ! | TAAAAAGAAAACAAAGGCAA+GGG | + | tig0020633:80625-80644 | None:intergenic | 25.0% |
| ! | ATAAAAAGAAAACAAAGGCA+AGG | + | tig0020633:80626-80645 | None:intergenic | 25.0% |
| ! | AAAAAAAACACTTACATGAC+TGG | + | tig0020633:80868-80887 | None:intergenic | 25.0% |
| ! | TATACAACTCAAATAGAACA+AGG | + | tig0020633:80918-80937 | None:intergenic | 25.0% |
| ! | AAAGACCTAAAATACATTAG+TGG | + | tig0020633:80999-81018 | None:intergenic | 25.0% |
| ! | TATCTGCAAATAATCAGTAA+TGG | + | tig0020633:81024-81043 | None:intergenic | 25.0% |
| ! | AAAATTCCATAATCAAAAGG+TGG | + | tig0020633:81233-81252 | None:intergenic | 25.0% |
| ! | AATATCTTTACTGTTTATGG+TGG | - | tig0020633:81303-81322 | Msa1384040:intron | 25.0% |
| ! | ATATCTTTACTGTTTATGGT+GGG | - | tig0020633:81304-81323 | Msa1384040:intron | 25.0% |
| ! | AAACCTAACTTCAGAAATTA+AGG | + | tig0020633:81450-81469 | None:intergenic | 25.0% |
| !!! | AGTTAAGGTCATTGATTTTA+TGG | - | tig0020633:81490-81509 | Msa1384040:intron | 25.0% |
| !! | AGTTTCTATGTCTAAAATAC+TGG | - | tig0020633:81513-81532 | Msa1384040:intron | 25.0% |
| ! | TATCTCAGAACTTCTTATAA+AGG | - | tig0020633:81617-81636 | Msa1384040:intron | 25.0% |
| ! | CAAATAATCAATGAAATCAC+GGG | + | tig0020633:81819-81838 | None:intergenic | 25.0% |
| ! | AAGTAAATGAAAATAGGTTG+TGG | + | tig0020633:81846-81865 | None:intergenic | 25.0% |
| ! | GAAATATGATAAAATAGAGG+AGG | - | tig0020633:82052-82071 | Msa1384040:intron | 25.0% |
| ! | GTATAAATAGGAGAATATGA+TGG | + | tig0020633:82152-82171 | None:intergenic | 25.0% |
| !!! | TATTTTTATACTCATGCAGA+AGG | + | tig0020633:82940-82959 | None:intergenic | 25.0% |
| !! | ATATAGTGTTTGAGATTTGT+TGG | - | tig0020633:82957-82976 | Msa1384040:intron | 25.0% |
| ! | GAAAATCAATCAGTGAAATA+AGG | + | tig0020633:83131-83150 | None:intergenic | 25.0% |
| !!! | ACTTATTTTCATGGATTTGT+AGG | - | tig0020633:83236-83255 | Msa1384040:intron | 25.0% |
| ! | GTATTCTCTGTAAATAAACA+TGG | + | tig0020633:83321-83340 | None:intergenic | 25.0% |
| ! | CAGAGAATACTTATATTGTT+CGG | - | tig0020633:83331-83350 | Msa1384040:intron | 25.0% |
| ! | AGAGAATACTTATATTGTTC+GGG | - | tig0020633:83332-83351 | Msa1384040:intron | 25.0% |
| ! | GTAATATTGAAATTATGGGT+TGG | - | tig0020633:84125-84144 | Msa1384040:five_prime_UTR | 25.0% |
| TACGTGTTAGTCAATAGTAA+CGG | - | tig0020633:78265-78284 | Msa1384040:CDS | 30.0% | |
| AATGTGTGTTTGGAAATCAT+GGG | - | tig0020633:78441-78460 | Msa1384040:CDS | 30.0% | |
| ! | AAAAAAAATGCTGTGATGGA+AGG | - | tig0020633:78556-78575 | Msa1384040:CDS | 30.0% |
| !! | ATATTGTTTTGTTCATCTGC+AGG | - | tig0020633:78860-78879 | Msa1384040:intron | 30.0% |
| ! | ACTGTGATTTGTAATCACTT+CGG | + | tig0020633:78922-78941 | None:intergenic | 30.0% |
| TGATTACAAATCACAGTACA+TGG | - | tig0020633:78925-78944 | Msa1384040:intron | 30.0% | |
| ! | ATATTTTCGTTGCAATGTCA+TGG | - | tig0020633:78982-79001 | Msa1384040:intron | 30.0% |
| AACAATAGTGAAGTAACTAC+CGG | + | tig0020633:79163-79182 | None:intergenic | 30.0% | |
| TTACTTCACTATTGTTTGAG+AGG | - | tig0020633:79167-79186 | Msa1384040:intron | 30.0% | |
| AAATTAAACCATGGTAGTCA+TGG | - | tig0020633:79297-79316 | Msa1384040:CDS | 30.0% | |
| !! | ACCTCTAGGTCTTTTAAAAA+AGG | - | tig0020633:79330-79349 | Msa1384040:CDS | 30.0% |
| !!! | TCCTTTTTTAAAAGACCTAG+AGG | + | tig0020633:79334-79353 | None:intergenic | 30.0% |
| TCTGAAGGACTGAAATTAAT+TGG | - | tig0020633:79366-79385 | Msa1384040:CDS | 30.0% | |
| AAATTAATTGGTCGATCACT+TGG | - | tig0020633:79378-79397 | Msa1384040:CDS | 30.0% | |
| ACAGGAAGATAAAAAAACAG+TGG | + | tig0020633:79540-79559 | None:intergenic | 30.0% | |
| ! | TGTAATTCATCATTGATGAC+AGG | + | tig0020633:79558-79577 | None:intergenic | 30.0% |
| AATGATGAATTACACTGTCT+GGG | - | tig0020633:79564-79583 | Msa1384040:intron | 30.0% | |
| TGACTATTATTGCCAACTTT+CGG | + | tig0020633:79596-79615 | None:intergenic | 30.0% | |
| !! | TAGCAAATAGAAAGCATCAA+TGG | + | tig0020633:79634-79653 | None:intergenic | 30.0% |
| ! | TGCTTTCTATTTGCTAAACA+TGG | - | tig0020633:79638-79657 | Msa1384040:intron | 30.0% |
| AAGATAACAGAGAACATTGT+TGG | + | tig0020633:79904-79923 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTTTTTGGGGGG+GGG | - | tig0020633:79991-80010 | Msa1384040:CDS | 30.0% |
| ! | GCTCAATAATTTTTGTTAGC+TGG | - | tig0020633:80296-80315 | Msa1384040:intron | 30.0% |
| !! | TATAAATGATGCTTTTTGGG+TGG | - | tig0020633:80341-80360 | Msa1384040:intron | 30.0% |
| ! | GATATACTGAACCCTTATTT+CGG | - | tig0020633:80368-80387 | Msa1384040:intron | 30.0% |
| ! | ATATACTGAACCCTTATTTC+GGG | - | tig0020633:80369-80388 | Msa1384040:intron | 30.0% |
| ! | CTTGTAATCAGATTGTTGTT+TGG | - | tig0020633:80649-80668 | Msa1384040:CDS | 30.0% |
| TATTCCTAGATTTCTTCGAA+TGG | - | tig0020633:80749-80768 | Msa1384040:CDS | 30.0% | |
| !! | CTCTTAAGTTCTGAAGTTAA+TGG | + | tig0020633:80777-80796 | None:intergenic | 30.0% |
| ACTGATTATTTGCAGATAGT+TGG | - | tig0020633:81026-81045 | Msa1384040:intron | 30.0% | |
| TATCTTTACTGTTTATGGTG+GGG | - | tig0020633:81305-81324 | Msa1384040:intron | 30.0% | |
| !! | GAACCTTAATTTCTGAAGTT+AGG | - | tig0020633:81444-81463 | Msa1384040:intron | 30.0% |
| CTTATCCTTCAATTGAGTTA+AGG | - | tig0020633:81475-81494 | Msa1384040:intron | 30.0% | |
| AATGACCTTAACTCAATTGA+AGG | + | tig0020633:81483-81502 | None:intergenic | 30.0% | |
| TAATAGACCATATCAATGGT+AGG | - | tig0020633:81592-81611 | Msa1384040:intron | 30.0% | |
| AATAGACCATATCAATGGTA+GGG | - | tig0020633:81593-81612 | Msa1384040:intron | 30.0% | |
| GCAGTGAAGTAAATGAAAAT+AGG | + | tig0020633:81852-81871 | None:intergenic | 30.0% | |
| ACGTATCGTAAAAGTAAGAA+TGG | - | tig0020633:82010-82029 | Msa1384040:intron | 30.0% | |
| ATGGTATTCTCTATTGTGAA+GGG | + | tig0020633:82095-82114 | None:intergenic | 30.0% | |
| TATGGTATTCTCTATTGTGA+AGG | + | tig0020633:82096-82115 | None:intergenic | 30.0% | |
| TTTGTTAGGATATGGGATAA+GGG | + | tig0020633:82235-82254 | None:intergenic | 30.0% | |
| ATTGTTAGGATGAGATAAGA+GGG | + | tig0020633:82261-82280 | None:intergenic | 30.0% | |
| TGAGAATATGAGTATGTGTT+AGG | + | tig0020633:82302-82321 | None:intergenic | 30.0% | |
| CTTCATAGTTGAGAACTATA+TGG | - | tig0020633:82354-82373 | Msa1384040:CDS | 30.0% | |
| GTGCTCATGTAAATAACATT+TGG | + | tig0020633:82387-82406 | None:intergenic | 30.0% | |
| TGAAGATATGTCTGCAATAA+CGG | + | tig0020633:82507-82526 | None:intergenic | 30.0% | |
| GTATGATCAATATAAGTGGT+TGG | - | tig0020633:82632-82651 | Msa1384040:CDS | 30.0% | |
| !!! | ACTTGACTTTTTTCCGATAA+AGG | - | tig0020633:82822-82841 | Msa1384040:intron | 30.0% |
| !! | TGAGTTGATGAAATAGTTCA+TGG | + | tig0020633:83015-83034 | None:intergenic | 30.0% |
| GATTAAGTTAATCTACCAGA+GGG | + | tig0020633:83178-83197 | None:intergenic | 30.0% | |
| TGATTAAGTTAATCTACCAG+AGG | + | tig0020633:83179-83198 | None:intergenic | 30.0% | |
| AATACTTATATTGTTCGGGA+AGG | - | tig0020633:83336-83355 | Msa1384040:intron | 30.0% | |
| !! | TTCGTTTTTACTCTCAACAA+TGG | - | tig0020633:83649-83668 | Msa1384040:intron | 30.0% |
| TATGACTGAACTTGTGAAAA+AGG | - | tig0020633:83992-84011 | Msa1384040:intron | 30.0% | |
| TAGTATACATTAAGCCTAAC+TGG | - | tig0020633:84051-84070 | Msa1384040:five_prime_UTR | 30.0% | |
| !! | ATTATGGGTTGGAAGAATTA+AGG | - | tig0020633:84136-84155 | Msa1384040:five_prime_UTR | 30.0% |
| TGAAAGTGAAGTTGAAGTTG+CGG | + | tig0020633:77901-77920 | None:intergenic | 35.0% | |
| TTGGAGAGAGAAGAAGAAAA+CGG | + | tig0020633:77948-77967 | None:intergenic | 35.0% | |
| ! | TTAACAAGAAAAGCACAGTG+AGG | + | tig0020633:78035-78054 | None:intergenic | 35.0% |
| !! | TGGTGATTTGCTGTATCATA+AGG | - | tig0020633:78235-78254 | Msa1384040:CDS | 35.0% |
| AGTCAATAGTAACGGCAATA+TGG | - | tig0020633:78273-78292 | Msa1384040:CDS | 35.0% | |
| !!! | TCTCTCTCAGGGTTTTATTT+GGG | + | tig0020633:78335-78354 | None:intergenic | 35.0% |
| !!! | TTCTCTCTCAGGGTTTTATT+TGG | + | tig0020633:78336-78355 | None:intergenic | 35.0% |
| ! | CTTTGTTTGTTTCTCTCTCA+GGG | + | tig0020633:78346-78365 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGTTTCTCTCTC+AGG | + | tig0020633:78347-78366 | None:intergenic | 35.0% |
| CGTTGAATTGAATGTGTGTT+TGG | - | tig0020633:78431-78450 | Msa1384040:CDS | 35.0% | |
| GAATGTGTGTTTGGAAATCA+TGG | - | tig0020633:78440-78459 | Msa1384040:CDS | 35.0% | |
| TCTTTCCTATGGGAATAAGA+GGG | - | tig0020633:78523-78542 | Msa1384040:CDS | 35.0% | |
| !! | TACATATGGGTTTTAACACC+TGG | - | tig0020633:78660-78679 | Msa1384040:CDS | 35.0% |
| !! | TGCTCAAGATTACTTTTACC+AGG | + | tig0020633:78681-78700 | None:intergenic | 35.0% |
| !!! | TGAGCATGAGTTTCTAGTTT+TGG | - | tig0020633:78695-78714 | Msa1384040:CDS | 35.0% |
| !!! | GAGCATGAGTTTCTAGTTTT+GGG | - | tig0020633:78696-78715 | Msa1384040:CDS | 35.0% |
| GTCAAACATCTTTCAACAGT+AGG | + | tig0020633:78900-78919 | None:intergenic | 35.0% | |
| TACAAATCACAGTACATGGA+TGG | - | tig0020633:78929-78948 | Msa1384040:intron | 35.0% | |
| ATGTCTTTCTCTGATCTAGA+TGG | - | tig0020633:79114-79133 | Msa1384040:intron | 35.0% | |
| TGTCTTTCTCTGATCTAGAT+GGG | - | tig0020633:79115-79134 | Msa1384040:intron | 35.0% | |
| ! | TTTTTCTAGGTGGGATTTCT+TGG | - | tig0020633:79215-79234 | Msa1384040:intron | 35.0% |
| GATGTCAGAGTTACAAAATC+TGG | - | tig0020633:79261-79280 | Msa1384040:CDS | 35.0% | |
| !! | TCAGACACTTTAAGATCTTC+TGG | + | tig0020633:79429-79448 | None:intergenic | 35.0% |
| !!! | ATGCATTTTTTCCGTGTTTG+TGG | - | tig0020633:79512-79531 | Msa1384040:intron | 35.0% |
| CAATGATGAATTACACTGTC+TGG | - | tig0020633:79563-79582 | Msa1384040:intron | 35.0% | |
| GCAGCGAAAATATTATCTCA+TGG | + | tig0020633:79940-79959 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTTTTGGGGGGG+GGG | - | tig0020633:79992-80011 | Msa1384040:CDS | 35.0% |
| CACTTATTCTTTCTTCTCTC+GGG | + | tig0020633:80056-80075 | None:intergenic | 35.0% | |
| GCACTTATTCTTTCTTCTCT+CGG | + | tig0020633:80057-80076 | None:intergenic | 35.0% | |
| ATGCAACAAGATTGGTGTAT+TGG | + | tig0020633:80144-80163 | None:intergenic | 35.0% | |
| AAACAGGTATGCAACAAGAT+TGG | + | tig0020633:80152-80171 | None:intergenic | 35.0% | |
| TTGGACATGTTAGTGAATGT+CGG | + | tig0020633:80494-80513 | None:intergenic | 35.0% | |
| TTGTTTGGAGATTTCTTCAG+AGG | - | tig0020633:80664-80683 | Msa1384040:CDS | 35.0% | |
| AAGCAAGATAATGAACAGCA+AGG | + | tig0020633:80724-80743 | None:intergenic | 35.0% | |
| CAAATAGAACAAGGAAGCAA+AGG | + | tig0020633:80909-80928 | None:intergenic | 35.0% | |
| ! | CTCTGCCACTAATGTATTTT+AGG | - | tig0020633:80991-81010 | Msa1384040:intron | 35.0% |
| ATTCCATAATCAAAAGGTGG+AGG | + | tig0020633:81230-81249 | None:intergenic | 35.0% | |
| TGAAATGATACCAGATGACA+AGG | + | tig0020633:81264-81283 | None:intergenic | 35.0% | |
| ATCTTTACTGTTTATGGTGG+GGG | - | tig0020633:81306-81325 | Msa1384040:intron | 35.0% | |
| ! | TTGTCCAGATAAGAGTGTAT+TGG | - | tig0020633:81370-81389 | Msa1384040:intron | 35.0% |
| AAGTCCAATACACTCTTATC+TGG | + | tig0020633:81377-81396 | None:intergenic | 35.0% | |
| TACAGAGCAAAGTAATGAGT+GGG | + | tig0020633:81420-81439 | None:intergenic | 35.0% | |
| TTACAGAGCAAAGTAATGAG+TGG | + | tig0020633:81421-81440 | None:intergenic | 35.0% | |
| AGATAACCCTACCATTGATA+TGG | + | tig0020633:81602-81621 | None:intergenic | 35.0% | |
| !!! | GTTCTAAAGCCTGCATTTTT+TGG | - | tig0020633:81646-81665 | Msa1384040:intron | 35.0% |
| TGAAACAAGCCAAAAAATGC+AGG | + | tig0020633:81658-81677 | None:intergenic | 35.0% | |
| !!! | TTTTGGCTTGTTTCACGTTT+TGG | - | tig0020633:81663-81682 | Msa1384040:intron | 35.0% |
| TAATCAATGAAATCACGGGA+GGG | + | tig0020633:81815-81834 | None:intergenic | 35.0% | |
| ATAATCAATGAAATCACGGG+AGG | + | tig0020633:81816-81835 | None:intergenic | 35.0% | |
| TTCAAACTAGCACATATCCT+GGG | - | tig0020633:81891-81910 | Msa1384040:intron | 35.0% | |
| TGGTATTCTCTATTGTGAAG+GGG | + | tig0020633:82094-82113 | None:intergenic | 35.0% | |
| GGATAACGAGGAGTTAAATA+GGG | + | tig0020633:82195-82214 | None:intergenic | 35.0% | |
| AGGATAACGAGGAGTTAAAT+AGG | + | tig0020633:82196-82215 | None:intergenic | 35.0% | |
| AGTAACAACATAGGATAACG+AGG | + | tig0020633:82207-82226 | None:intergenic | 35.0% | |
| TTGTTAGGATATGGGATAAG+GGG | + | tig0020633:82234-82253 | None:intergenic | 35.0% | |
| ! | GTTTGTTAGGATATGGGATA+AGG | + | tig0020633:82236-82255 | None:intergenic | 35.0% |
| !! | AGGGAAGTTTGTTAGGATAT+GGG | + | tig0020633:82242-82261 | None:intergenic | 35.0% |
| ! | AGATAAGAGGGAAGTTTGTT+AGG | + | tig0020633:82249-82268 | None:intergenic | 35.0% |
| GATTGTTAGGATGAGATAAG+AGG | + | tig0020633:82262-82281 | None:intergenic | 35.0% | |
| ! | TTTAGTTCAGAGTCTACCAA+AGG | - | tig0020633:82680-82699 | Msa1384040:CDS | 35.0% |
| ATATCTCTTCGAAGATCCTT+TGG | + | tig0020633:82699-82718 | None:intergenic | 35.0% | |
| TATTAAGCGTCATCTCTGTT+TGG | - | tig0020633:82716-82735 | Msa1384040:CDS | 35.0% | |
| TCTCTTACGTGTGACTAAAA+AGG | - | tig0020633:82799-82818 | Msa1384040:intron | 35.0% | |
| ! | TCTCTCTTAGATTAGTTACC+TGG | - | tig0020633:82988-83007 | Msa1384040:intron | 35.0% |
| AACTCCAAAAAGTCACATAG+AGG | + | tig0020633:83082-83101 | None:intergenic | 35.0% | |
| AAATTCGAAATTGATCCCTC+TGG | - | tig0020633:83160-83179 | Msa1384040:intron | 35.0% | |
| TCATCCATACTCTCAAATAG+TGG | + | tig0020633:83264-83283 | None:intergenic | 35.0% | |
| !! | ATGAAAAGCATCTCATCAAC+TGG | + | tig0020633:83366-83385 | None:intergenic | 35.0% |
| TTTCAACCGCACATATCTAA+AGG | - | tig0020633:83437-83456 | Msa1384040:intron | 35.0% | |
| !!! | CTTGTTTTATTCAAGCAGCA+TGG | - | tig0020633:83685-83704 | Msa1384040:intron | 35.0% |
| AATTATGAAGCTTCGTCAGA+AGG | - | tig0020633:83728-83747 | Msa1384040:intron | 35.0% | |
| !! | AAACTTTGAGGCTAATAAGG+CGG | + | tig0020633:83811-83830 | None:intergenic | 35.0% |
| GTAAATAAGTTACATGCTGG+TGG | + | tig0020633:84094-84113 | None:intergenic | 35.0% | |
| ACGGTAAATAAGTTACATGC+TGG | + | tig0020633:84097-84116 | None:intergenic | 35.0% | |
| ACAGTTTCTCTCTCTCTATG+AGG | - | tig0020633:77921-77940 | Msa1384040:three_prime_UTR | 40.0% | |
| TTACAATTGTTGCCCAACTC+TGG | - | tig0020633:78488-78507 | Msa1384040:CDS | 40.0% | |
| TTATCAGGGTCTCTTTCCTA+TGG | - | tig0020633:78512-78531 | Msa1384040:CDS | 40.0% | |
| TATCAGGGTCTCTTTCCTAT+GGG | - | tig0020633:78513-78532 | Msa1384040:CDS | 40.0% | |
| CTCTTTCCTATGGGAATAAG+AGG | - | tig0020633:78522-78541 | Msa1384040:CDS | 40.0% | |
| !! | CTAAAAGCATCATGGTAGAG+AGG | + | tig0020633:78777-78796 | None:intergenic | 40.0% |
| ACCTAAAAGAACTTTCTCGC+TGG | + | tig0020633:78955-78974 | None:intergenic | 40.0% | |
| !! | GTAACTACCGGTTCATAAAC+AGG | + | tig0020633:79151-79170 | None:intergenic | 40.0% |
| AAACAGTGGATCCACAAACA+CGG | + | tig0020633:79526-79545 | None:intergenic | 40.0% | |
| CAATAATAGTCACCACCTTG+AGG | - | tig0020633:79604-79623 | Msa1384040:intron | 40.0% | |
| ! | ACAGAAGTCTTTTCAACCTG+TGG | + | tig0020633:79804-79823 | None:intergenic | 40.0% |
| !! | CAGAGAACATTGTTGGTAGT+TGG | + | tig0020633:79897-79916 | None:intergenic | 40.0% |
| TCCTCTTGCTTCTTACTCAT+AGG | - | tig0020633:79962-79981 | Msa1384040:intron | 40.0% | |
| TCCTATGAGTAAGAAGCAAG+AGG | + | tig0020633:79966-79985 | None:intergenic | 40.0% | |
| !!! | TTTTTTTTTTTTGGGGGGGG+GGG | - | tig0020633:79993-80012 | Msa1384040:CDS | 40.0% |
| AGTGTTTGCCTATTTGTCTG+TGG | + | tig0020633:80117-80136 | None:intergenic | 40.0% | |
| !!! | ATGATGCTTTTTGGGTGGAT+TGG | - | tig0020633:80346-80365 | Msa1384040:intron | 40.0% |
| TGATGTACTAGCAACAAAGC+AGG | - | tig0020633:80698-80717 | Msa1384040:CDS | 40.0% | |
| GGTACCATTCGAAGAAATCT+AGG | + | tig0020633:80756-80775 | None:intergenic | 40.0% | |
| TCAGAACTTAAGAGAACAGC+TGG | - | tig0020633:80783-80802 | Msa1384040:CDS | 40.0% | |
| !! | TGCAGATAGTTGGTGCTTTT+TGG | - | tig0020633:81036-81055 | Msa1384040:intron | 40.0% |
| ! | TTTTGTTGCACCCATTGTCA+CGG | + | tig0020633:81109-81128 | None:intergenic | 40.0% |
| !!! | AGCTTTGCTTTTGTTTTGCC+AGG | + | tig0020633:81174-81193 | None:intergenic | 40.0% |
| !! | GATCCTCCACCTTTTGATTA+TGG | - | tig0020633:81224-81243 | Msa1384040:CDS | 40.0% |
| ! | TTTAAGCAAGCCTTGTCATC+TGG | - | tig0020633:81251-81270 | Msa1384040:CDS | 40.0% |
| ! | AGTGTATTGGACTTCCCTTT+TGG | - | tig0020633:81383-81402 | Msa1384040:intron | 40.0% |
| ACAGAGCAAAGTAATGAGTG+GGG | + | tig0020633:81419-81438 | None:intergenic | 40.0% | |
| AGAGCAAAGCGCATATTGTA+GGG | + | tig0020633:81774-81793 | None:intergenic | 40.0% | |
| AATCAATGAAATCACGGGAG+GGG | + | tig0020633:81814-81833 | None:intergenic | 40.0% | |
| CTTCAAACTAGCACATATCC+TGG | - | tig0020633:81890-81909 | Msa1384040:intron | 40.0% | |
| TCAAACTAGCACATATCCTG+GGG | - | tig0020633:81892-81911 | Msa1384040:intron | 40.0% | |
| ATTGAAAAGATAACCTCCCC+AGG | + | tig0020633:81911-81930 | None:intergenic | 40.0% | |
| TCAATAGCACTTGCCATATC+AGG | - | tig0020633:81926-81945 | Msa1384040:intron | 40.0% | |
| TTACGATACGTCAAGCTCAA+TGG | + | tig0020633:82001-82020 | None:intergenic | 40.0% | |
| AATAGAGGAGGATCTCTCTA+AGG | - | tig0020633:82064-82083 | Msa1384040:intron | 40.0% | |
| ATAGAGGAGGATCTCTCTAA+GGG | - | tig0020633:82065-82084 | Msa1384040:intron | 40.0% | |
| GAGGAGTTAAATAGGGATGT+TGG | + | tig0020633:82188-82207 | None:intergenic | 40.0% | |
| AGGGGAGTTAGTAACAACAT+AGG | + | tig0020633:82216-82235 | None:intergenic | 40.0% | |
| !! | GAGGGAAGTTTGTTAGGATA+TGG | + | tig0020633:82243-82262 | None:intergenic | 40.0% |
| AAGACAGTGAGGAGATTGTT+AGG | + | tig0020633:82275-82294 | None:intergenic | 40.0% | |
| TGTTAGGACATAAGACAGTG+AGG | + | tig0020633:82286-82305 | None:intergenic | 40.0% | |
| AGTTGAGAACTATATGGCTG+TGG | - | tig0020633:82360-82379 | Msa1384040:CDS | 40.0% | |
| TGGAGGAAATGAGAGTCAAA+AGG | - | tig0020633:82544-82563 | Msa1384040:CDS | 40.0% | |
| ! | AAAGGCGTGATTCAGAACAA+TGG | - | tig0020633:82562-82581 | Msa1384040:CDS | 40.0% |
| GGCGGTATGATCAATATAAG+TGG | - | tig0020633:82628-82647 | Msa1384040:CDS | 40.0% | |
| !! | ATCTCTGTTTGGCTTTAGTG+AGG | - | tig0020633:82727-82746 | Msa1384040:CDS | 40.0% |
| !!! | ACACGTAAGAGAGAGTGTTT+TGG | + | tig0020633:82791-82810 | None:intergenic | 40.0% |
| ACTGCACAACAACATCAATG+TGG | + | tig0020633:82892-82911 | None:intergenic | 40.0% | |
| GATGAAATAGTTCATGGACC+AGG | + | tig0020633:83009-83028 | None:intergenic | 40.0% | |
| ! | AGTGCCTCTATGTGACTTTT+TGG | - | tig0020633:83075-83094 | Msa1384040:intron | 40.0% |
| GGTTCCACTATTTGAGAGTA+TGG | - | tig0020633:83257-83276 | Msa1384040:intron | 40.0% | |
| TGGTTTCAGTCTCTCACATA+TGG | + | tig0020633:83301-83320 | None:intergenic | 40.0% | |
| ! | GAGATGCTTTTCATCATACG+CGG | - | tig0020633:83372-83391 | Msa1384040:intron | 40.0% |
| ! | AGATGCTTTTCATCATACGC+GGG | - | tig0020633:83373-83392 | Msa1384040:intron | 40.0% |
| GAAGATTAGAACCAGATCTG+GGG | + | tig0020633:83506-83525 | None:intergenic | 40.0% | |
| GGAAGATTAGAACCAGATCT+GGG | + | tig0020633:83507-83526 | None:intergenic | 40.0% | |
| TGGAAGATTAGAACCAGATC+TGG | + | tig0020633:83508-83527 | None:intergenic | 40.0% | |
| CTAATCTTCCAACCTCTACT+CGG | - | tig0020633:83517-83536 | Msa1384040:intron | 40.0% | |
| AACAAATTTCAGCTCATCGG+CGG | + | tig0020633:83583-83602 | None:intergenic | 40.0% | |
| GGCAACAAATTTCAGCTCAT+CGG | + | tig0020633:83586-83605 | None:intergenic | 40.0% | |
| TTGAATAAAACAAGCAGCCC+AGG | + | tig0020633:83679-83698 | None:intergenic | 40.0% | |
| !! | GGCAAACTTTGAGGCTAATA+AGG | + | tig0020633:83814-83833 | None:intergenic | 40.0% |
| TTGTAATTTCACCAACTCCC+TGG | + | tig0020633:83883-83902 | None:intergenic | 40.0% | |
| ACCTAATATGACAGCCAGTT+AGG | + | tig0020633:84068-84087 | None:intergenic | 40.0% | |
| !! | GATCCTTCCTCCTTGTTGTT+CGG | - | tig0020633:77816-77835 | Msa1384040:three_prime_UTR | 45.0% |
| AAACTCTGCACCGAACAACA+AGG | + | tig0020633:77829-77848 | None:intergenic | 45.0% | |
| GTGAGGAGAATGAATAGCGA+CGG | + | tig0020633:78018-78037 | None:intergenic | 45.0% | |
| TTGCCCAACTCTGGATTATC+AGG | - | tig0020633:78497-78516 | Msa1384040:CDS | 45.0% | |
| TGCCCAACTCTGGATTATCA+GGG | - | tig0020633:78498-78517 | Msa1384040:CDS | 45.0% | |
| GACCCTGATAATCCAGAGTT+GGG | + | tig0020633:78503-78522 | None:intergenic | 45.0% | |
| AGACCCTGATAATCCAGAGT+TGG | + | tig0020633:78504-78523 | None:intergenic | 45.0% | |
| GGTAACCCTCTTATTCCCAT+AGG | + | tig0020633:78531-78550 | None:intergenic | 45.0% | |
| GTAGAGAGGCTGAAACAACT+TGG | + | tig0020633:78763-78782 | None:intergenic | 45.0% | |
| ! | GCCAGCGAGAAAGTTCTTTT+AGG | - | tig0020633:78951-78970 | Msa1384040:intron | 45.0% |
| GGAATGAGAAAGGGATCTGA+AGG | - | tig0020633:79351-79370 | Msa1384040:CDS | 45.0% | |
| AATTGGTCGATCACTTGGAC+TGG | - | tig0020633:79383-79402 | Msa1384040:CDS | 45.0% | |
| ATTGGTCGATCACTTGGACT+GGG | - | tig0020633:79384-79403 | Msa1384040:CDS | 45.0% | |
| TCTGGGTATAGACCGAAAGT+TGG | - | tig0020633:79581-79600 | Msa1384040:intron | 45.0% | |
| CAATGTAAGCCGTGCGAAAT+TGG | + | tig0020633:79668-79687 | None:intergenic | 45.0% | |
| CTCCATCATCTCGTGTCTTT+GGG | - | tig0020633:79688-79707 | Msa1384040:intron | 45.0% | |
| ! | ATATCGTCGCAAGTATCGCT+TGG | + | tig0020633:79748-79767 | None:intergenic | 45.0% |
| ! | GTCTTTTCAACCTGTGGTAC+TGG | + | tig0020633:79798-79817 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTGGGGGGGGG+GGG | - | tig0020633:79994-80013 | Msa1384040:CDS | 45.0% |
| TGGCAATGCCACAGACAAAT+AGG | - | tig0020633:80106-80125 | Msa1384040:intron | 45.0% | |
| CCTTGTCTCTCCCGAAATAA+GGG | + | tig0020633:80382-80401 | None:intergenic | 45.0% | |
| TCCTTGTCTCTCCCGAAATA+AGG | + | tig0020633:80383-80402 | None:intergenic | 45.0% | |
| TGTCTTTGCCGAAACTGCAT+GGG | - | tig0020633:80806-80825 | Msa1384040:CDS | 45.0% | |
| TTGAACGCAATGACTCATGC+TGG | - | tig0020633:81072-81091 | Msa1384040:intron | 45.0% | |
| AGAATGCTTGCCGTGACAAT+GGG | - | tig0020633:81096-81115 | Msa1384040:intron | 45.0% | |
| GTATTGTGAGAACCAGCACA+CGG | - | tig0020633:81136-81155 | Msa1384040:CDS | 45.0% | |
| GGGGTGATTATGCACCAAAA+GGG | + | tig0020633:81400-81419 | None:intergenic | 45.0% | |
| TGGGGTGATTATGCACCAAA+AGG | + | tig0020633:81401-81420 | None:intergenic | 45.0% | |
| GAGAGCAAAGCGCATATTGT+AGG | + | tig0020633:81775-81794 | None:intergenic | 45.0% | |
| ATCAATGAAATCACGGGAGG+GGG | + | tig0020633:81813-81832 | None:intergenic | 45.0% | |
| TTACTTCACTGCAGTACCCT+TGG | - | tig0020633:81860-81879 | Msa1384040:intron | 45.0% | |
| GAAGAGGATGAGACCTGATA+TGG | + | tig0020633:81942-81961 | None:intergenic | 45.0% | |
| ATCTTCAGTCCCTTACCCTT+AGG | - | tig0020633:82520-82539 | Msa1384040:CDS | 45.0% | |
| TCTCATTTCCTCCAGCCTAA+GGG | + | tig0020633:82538-82557 | None:intergenic | 45.0% | |
| ! | CACGCTCTCTAAGCTCTTTT+GGG | + | tig0020633:82605-82624 | None:intergenic | 45.0% |
| ! | ACACGCTCTCTAAGCTCTTT+TGG | + | tig0020633:82606-82625 | None:intergenic | 45.0% |
| TATAAGTGGTTGGCAACACG+TGG | - | tig0020633:82642-82661 | Msa1384040:CDS | 45.0% | |
| !! | TCTGTTTGGCTTTAGTGAGG+AGG | - | tig0020633:82730-82749 | Msa1384040:CDS | 45.0% |
| !! | CTGTTTGGCTTTAGTGAGGA+GGG | - | tig0020633:82731-82750 | Msa1384040:CDS | 45.0% |
| !! | CTTGAGAGTGTTACCACAGA+TGG | - | tig0020633:83399-83418 | Msa1384040:intron | 45.0% |
| ! | AGAGTGTTACCACAGATGGT+GGG | - | tig0020633:83403-83422 | Msa1384040:intron | 45.0% |
| CAACCGCACATATCTAAAGG+AGG | - | tig0020633:83440-83459 | Msa1384040:intron | 45.0% | |
| CAGCCTCCTTTAGATATGTG+CGG | + | tig0020633:83446-83465 | None:intergenic | 45.0% | |
| TAAAGGAGGCTGAGTTCTGT+GGG | - | tig0020633:83454-83473 | Msa1384040:intron | 45.0% | |
| ! | TGGGGAGGAGCTTTTAACAT+GGG | - | tig0020633:83473-83492 | Msa1384040:intron | 45.0% |
| GTGAAGACGTCTAAACTGAC+TGG | + | tig0020633:83607-83626 | None:intergenic | 45.0% | |
| TAGACGTCTTCACAGTAGAC+AGG | - | tig0020633:83614-83633 | Msa1384040:intron | 45.0% | |
| ACTCTCAACAATGGAGAACC+TGG | - | tig0020633:83658-83677 | Msa1384040:intron | 45.0% | |
| CTCTCAACAATGGAGAACCT+GGG | - | tig0020633:83659-83678 | Msa1384040:intron | 45.0% | |
| GATGAGTCAGAAGGAAGTCA+CGG | - | tig0020633:83759-83778 | Msa1384040:intron | 45.0% | |
| GCATCATCTGCTGTAAAGTC+AGG | + | tig0020633:83918-83937 | None:intergenic | 45.0% | |
| GCCTAACTGGCTGTCATATT+AGG | - | tig0020633:84064-84083 | Msa1384040:five_prime_UTR | 45.0% | |
| !!! | TTTTAAAAAAATAATTTTGA+AGG | - | tig0020633:78135-78154 | Msa1384040:CDS | 5.0% |
| !!! | TTTAAAAAAATAATTTTGAA+GGG | - | tig0020633:78136-78155 | Msa1384040:CDS | 5.0% |
| !!! | AATGTTTTTTTTTTTTTTTT+GGG | - | tig0020633:79985-80004 | Msa1384040:intron | 5.0% |
| GAATGAATAGCGACGGTGGA+CGG | + | tig0020633:78011-78030 | None:intergenic | 50.0% | |
| AGGAGAATGAATAGCGACGG+TGG | + | tig0020633:78015-78034 | None:intergenic | 50.0% | |
| ! | TGCTGCTTCCATGACTACCA+TGG | + | tig0020633:79308-79327 | None:intergenic | 50.0% |
| ATGGAAGCAGCACAACCTCT+AGG | - | tig0020633:79316-79335 | Msa1384040:CDS | 50.0% | |
| TTGGTCGATCACTTGGACTG+GGG | - | tig0020633:79385-79404 | Msa1384040:CDS | 50.0% | |
| !! | ACTTGGACTGGGGGTATCTA+AGG | - | tig0020633:79395-79414 | Msa1384040:CDS | 50.0% |
| ATCAATGGCTGTCCTCAAGG+TGG | + | tig0020633:79619-79638 | None:intergenic | 50.0% | |
| AGCATCAATGGCTGTCCTCA+AGG | + | tig0020633:79622-79641 | None:intergenic | 50.0% | |
| CATGGCTCTCCAATTTCGCA+CGG | - | tig0020633:79656-79675 | Msa1384040:intron | 50.0% | |
| GCTCCATCATCTCGTGTCTT+TGG | - | tig0020633:79687-79706 | Msa1384040:intron | 50.0% | |
| CATCATCTCGTGTCTTTGGG+CGG | - | tig0020633:79691-79710 | Msa1384040:intron | 50.0% | |
| ATCATCTCGTGTCTTTGGGC+GGG | - | tig0020633:79692-79711 | Msa1384040:intron | 50.0% | |
| GGGCGAGCTTGTGATAGATT+CGG | - | tig0020633:79713-79732 | Msa1384040:intron | 50.0% | |
| !! | GTGGTACTGGCAACACAGAT+AGG | + | tig0020633:79785-79804 | None:intergenic | 50.0% |
| ATCTGTGTTGCCAGTACCAC+AGG | - | tig0020633:79785-79804 | Msa1384040:intron | 50.0% | |
| !!! | TTTTTTTTTTGGGGGGGGGG+GGG | - | tig0020633:79995-80014 | Msa1384040:CDS | 50.0% |
| ! | CCCTTATTTCGGGAGAGACA+AGG | - | tig0020633:80379-80398 | Msa1384040:intron | 50.0% |
| GTGTCTTTGCCGAAACTGCA+TGG | - | tig0020633:80805-80824 | Msa1384040:CDS | 50.0% | |
| CAGAATGCTTGCCGTGACAA+TGG | - | tig0020633:81095-81114 | Msa1384040:intron | 50.0% | |
| CACTATAACCTTCCGTGTGC+TGG | + | tig0020633:81151-81170 | None:intergenic | 50.0% | |
| ACACGGAAGGTTATAGTGCC+TGG | - | tig0020633:81153-81172 | Msa1384040:CDS | 50.0% | |
| TCAATGAAATCACGGGAGGG+GGG | + | tig0020633:81812-81831 | None:intergenic | 50.0% | |
| ! | AGTTTGAAGCCCCTGACCAA+GGG | + | tig0020633:81879-81898 | None:intergenic | 50.0% |
| ! | TAGTTTGAAGCCCCTGACCA+AGG | + | tig0020633:81880-81899 | None:intergenic | 50.0% |
| AACTAGCACATATCCTGGGG+AGG | - | tig0020633:81895-81914 | Msa1384040:intron | 50.0% | |
| ATCCTCTTCGCGCTTCTGAT+TGG | - | tig0020633:81953-81972 | Msa1384040:intron | 50.0% | |
| GCTTCTGATTGGCAACATGC+AGG | - | tig0020633:81964-81983 | Msa1384040:intron | 50.0% | |
| TTCCTCCAGCCTAAGGGTAA+GGG | + | tig0020633:82532-82551 | None:intergenic | 50.0% | |
| TTTCCTCCAGCCTAAGGGTA+AGG | + | tig0020633:82533-82552 | None:intergenic | 50.0% | |
| CTCTCATTTCCTCCAGCCTA+AGG | + | tig0020633:82539-82558 | None:intergenic | 50.0% | |
| ! | AAGAGCTTAGAGAGCGTGTG+AGG | - | tig0020633:82607-82626 | Msa1384040:CDS | 50.0% |
| !! | GAGAGTGTTACCACAGATGG+TGG | - | tig0020633:83402-83421 | Msa1384040:intron | 50.0% |
| CTAAAGGAGGCTGAGTTCTG+TGG | - | tig0020633:83453-83472 | Msa1384040:intron | 50.0% | |
| AAAGGAGGCTGAGTTCTGTG+GGG | - | tig0020633:83455-83474 | Msa1384040:intron | 50.0% | |
| ! | GTGGGGAGGAGCTTTTAACA+TGG | - | tig0020633:83472-83491 | Msa1384040:intron | 50.0% |
| TTCACAGTCCGAGTAGAGGT+TGG | + | tig0020633:83528-83547 | None:intergenic | 50.0% | |
| AACCTCTACTCGGACTGTGA+AGG | - | tig0020633:83527-83546 | Msa1384040:intron | 50.0% | |
| !! | GACTGTGAAGGCGTTAACAG+AGG | - | tig0020633:83539-83558 | Msa1384040:intron | 50.0% |
| TTTCAGCTCATCGGCGGTTA+AGG | + | tig0020633:83577-83596 | None:intergenic | 50.0% | |
| GCTTCGTCAGAAGGAAGAAG+CGG | - | tig0020633:83737-83756 | Msa1384040:intron | 50.0% | |
| GAAGAAGCGGATGAGTCAGA+AGG | - | tig0020633:83750-83769 | Msa1384040:intron | 50.0% | |
| TCAGAAGGAAGTCACGGCAA+CGG | - | tig0020633:83765-83784 | Msa1384040:intron | 50.0% | |
| TGCTGTAAAGTCAGGCTCAG+GGG | + | tig0020633:83910-83929 | None:intergenic | 50.0% | |
| CTGCTGTAAAGTCAGGCTCA+GGG | + | tig0020633:83911-83930 | None:intergenic | 50.0% | |
| TCTGCTGTAAAGTCAGGCTC+AGG | + | tig0020633:83912-83931 | None:intergenic | 50.0% | |
| GCACCGAACAACAAGGAGGA+AGG | + | tig0020633:77822-77841 | None:intergenic | 55.0% | |
| CTCTGCACCGAACAACAAGG+AGG | + | tig0020633:77826-77845 | None:intergenic | 55.0% | |
| ! | TGGTCGATCACTTGGACTGG+GGG | - | tig0020633:79386-79405 | Msa1384040:CDS | 55.0% |
| CGCCCAAAGACACGAGATGA+TGG | + | tig0020633:79693-79712 | None:intergenic | 55.0% | |
| TCATCTCGTGTCTTTGGGCG+GGG | - | tig0020633:79693-79712 | Msa1384040:intron | 55.0% | |
| CTTTGCCGAAACTGCATGGG+CGG | - | tig0020633:80809-80828 | Msa1384040:CDS | 55.0% | |
| TTTGCCGAAACTGCATGGGC+GGG | - | tig0020633:80810-80829 | Msa1384040:CDS | 55.0% | |
| TGTGAGAACCAGCACACGGA+AGG | - | tig0020633:81140-81159 | Msa1384040:CDS | 55.0% | |
| GGTGGGGGCTCCAGAATTTA+AGG | - | tig0020633:81321-81340 | Msa1384040:intron | 55.0% | |
| TCACTGCAGTACCCTTGGTC+AGG | - | tig0020633:81865-81884 | Msa1384040:intron | 55.0% | |
| CACTGCAGTACCCTTGGTCA+GGG | - | tig0020633:81866-81885 | Msa1384040:intron | 55.0% | |
| ACTGCAGTACCCTTGGTCAG+GGG | - | tig0020633:81867-81886 | Msa1384040:intron | 55.0% | |
| ! | TGCCAATCAGAAGCGCGAAG+AGG | + | tig0020633:81958-81977 | None:intergenic | 55.0% |
| TCAGTCCCTTACCCTTAGGC+TGG | - | tig0020633:82524-82543 | Msa1384040:CDS | 55.0% | |
| ! | AGCTTAGAGAGCGTGTGAGG+CGG | - | tig0020633:82610-82629 | Msa1384040:CDS | 55.0% |
| !! | GTGTTACCACAGATGGTGGG+AGG | - | tig0020633:83406-83425 | Msa1384040:intron | 55.0% |
| ! | GGAGCTTTTAACATGGGCCC+TGG | - | tig0020633:83479-83498 | Msa1384040:intron | 55.0% |
| ! | AGAACCAGATCTGGGGTCCA+GGG | + | tig0020633:83499-83518 | None:intergenic | 55.0% |
| ! | TAGAACCAGATCTGGGGTCC+AGG | + | tig0020633:83500-83519 | None:intergenic | 55.0% |
| TAATAAGGCGGCACCAAGGC+TGG | + | tig0020633:83799-83818 | None:intergenic | 55.0% | |
| AGGCTAATAAGGCGGCACCA+AGG | + | tig0020633:83803-83822 | None:intergenic | 55.0% | |
| GTCGATTGCGGTGTACACCA+CGG | + | tig0020633:83848-83867 | None:intergenic | 55.0% | |
| CAGTCTTGGCGAGTCGATTG+CGG | + | tig0020633:83860-83879 | None:intergenic | 55.0% | |
| GCTGTAAAGTCAGGCTCAGG+GGG | + | tig0020633:83909-83928 | None:intergenic | 55.0% | |
| TGAATAGCGACGGTGGACGG+CGG | + | tig0020633:78008-78027 | None:intergenic | 60.0% | |
| !! | GGGGGGGTTAGTTGGTAGGA+GGG | - | tig0020633:80011-80030 | Msa1384040:CDS | 60.0% |
| AGCACCCGCCCATGCAGTTT+CGG | + | tig0020633:80817-80836 | None:intergenic | 60.0% | |
| GTCCCTTACCCTTAGGCTGG+AGG | - | tig0020633:82527-82546 | Msa1384040:CDS | 60.0% | |
| !! | ACCACAGATGGTGGGAGGAG+TGG | - | tig0020633:83411-83430 | Msa1384040:intron | 60.0% |
| ACCACTCCTCCCACCATCTG+TGG | + | tig0020633:83415-83434 | None:intergenic | 60.0% | |
| CGCCTTCACAGTCCGAGTAG+AGG | + | tig0020633:83532-83551 | None:intergenic | 60.0% | |
| AACGGCAGTTCCTCCAGCCT+TGG | - | tig0020633:83783-83802 | Msa1384040:intron | 60.0% | |
| AGTGCGCGCGGCAAACTTTG+AGG | + | tig0020633:83823-83842 | None:intergenic | 60.0% | |
| !! | ATCGACTCGCCAAGACTGCC+AGG | - | tig0020633:83862-83881 | Msa1384040:intron | 60.0% |
| ! | TCGACTCGCCAAGACTGCCA+GGG | - | tig0020633:83863-83882 | Msa1384040:intron | 60.0% |
| CACCAACTCCCTGGCAGTCT+TGG | + | tig0020633:83874-83893 | None:intergenic | 60.0% | |
| !! | GGGGGGGGTTAGTTGGTAGG+AGG | - | tig0020633:80010-80029 | Msa1384040:CDS | 65.0% |
| GGAGGCTGAGTTCTGTGGGG+AGG | - | tig0020633:83458-83477 | Msa1384040:intron | 65.0% | |
| TAAGGCGGCACCAAGGCTGG+AGG | + | tig0020633:83796-83815 | None:intergenic | 65.0% | |
| ! | TACACCACGGAGAGTGCGCG+CGG | + | tig0020633:83835-83854 | None:intergenic | 65.0% |
| CGCCAAGACTGCCAGGGAGT+TGG | - | tig0020633:83869-83888 | Msa1384040:intron | 65.0% | |
| ! | TTGGGGGGGGGGGGGTTAGT+TGG | - | tig0020633:80003-80022 | Msa1384040:CDS | 70.0% |
| !! | GGGGGGGGGGGTTAGTTGGT+AGG | - | tig0020633:80007-80026 | Msa1384040:CDS | 70.0% |
| TGGGCCCTGGACCCCAGATC+TGG | - | tig0020633:83492-83511 | Msa1384040:intron | 70.0% | |
| TTTGCCGCGCGCACTCTCCG+TGG | - | tig0020633:83828-83847 | Msa1384040:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020633 | gene | 77771 | 84203 | 77771 | ID=Msa1384040;Name=Msa1384040 |
| tig0020633 | mRNA | 77771 | 84203 | 77771 | ID=Msa1384040-mRNA-1;Parent=Msa1384040;Name=Msa1384040-mRNA-1;_AED=0.10;_eAED=0.10;_QI=201|1|1|1|0.85|0.75|8|259|731 |
| tig0020633 | exon | 77771 | 78716 | 77771 | ID=Msa1384040-mRNA-1:exon:8928;Parent=Msa1384040-mRNA-1 |
| tig0020633 | exon | 79222 | 79458 | 79222 | ID=Msa1384040-mRNA-1:exon:8927;Parent=Msa1384040-mRNA-1 |
| tig0020633 | exon | 79989 | 80100 | 79989 | ID=Msa1384040-mRNA-1:exon:8926;Parent=Msa1384040-mRNA-1 |
| tig0020633 | exon | 80632 | 80933 | 80632 | ID=Msa1384040-mRNA-1:exon:8925;Parent=Msa1384040-mRNA-1 |
| tig0020633 | exon | 81102 | 81314 | 81102 | ID=Msa1384040-mRNA-1:exon:8924;Parent=Msa1384040-mRNA-1 |
| tig0020633 | exon | 82168 | 82750 | 82168 | ID=Msa1384040-mRNA-1:exon:8923;Parent=Msa1384040-mRNA-1 |
| tig0020633 | exon | 83002 | 83092 | 83002 | ID=Msa1384040-mRNA-1:exon:8922;Parent=Msa1384040-mRNA-1 |
| tig0020633 | exon | 84032 | 84203 | 84032 | ID=Msa1384040-mRNA-1:exon:8921;Parent=Msa1384040-mRNA-1 |
| tig0020633 | five_prime_UTR | 84032 | 84203 | 84032 | ID=Msa1384040-mRNA-1:five_prime_utr;Parent=Msa1384040-mRNA-1 |
| tig0020633 | five_prime_UTR | 83064 | 83092 | 83064 | ID=Msa1384040-mRNA-1:five_prime_utr;Parent=Msa1384040-mRNA-1 |
| tig0020633 | CDS | 83002 | 83063 | 83002 | ID=Msa1384040-mRNA-1:cds;Parent=Msa1384040-mRNA-1 |
| tig0020633 | CDS | 82168 | 82750 | 82168 | ID=Msa1384040-mRNA-1:cds;Parent=Msa1384040-mRNA-1 |
| tig0020633 | CDS | 81102 | 81314 | 81102 | ID=Msa1384040-mRNA-1:cds;Parent=Msa1384040-mRNA-1 |
| tig0020633 | CDS | 80632 | 80933 | 80632 | ID=Msa1384040-mRNA-1:cds;Parent=Msa1384040-mRNA-1 |
| tig0020633 | CDS | 79989 | 80100 | 79989 | ID=Msa1384040-mRNA-1:cds;Parent=Msa1384040-mRNA-1 |
| tig0020633 | CDS | 79222 | 79458 | 79222 | ID=Msa1384040-mRNA-1:cds;Parent=Msa1384040-mRNA-1 |
| tig0020633 | CDS | 78030 | 78716 | 78030 | ID=Msa1384040-mRNA-1:cds;Parent=Msa1384040-mRNA-1 |
| tig0020633 | three_prime_UTR | 77771 | 78029 | 77771 | ID=Msa1384040-mRNA-1:three_prime_utr;Parent=Msa1384040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
