AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0924310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0924310 MtrunA17_Chr6g0483461 96.770 743 24 0 1 743 1 743 0.0 1499
Msa0924310 MtrunA17_Chr8g0392531 72.630 749 195 6 1 743 1 745 0.0 1111
Msa0924310 MtrunA17_Chr8g0340751 66.132 499 165 3 13 508 24 521 0.0 722
Msa0924310 MtrunA17_Chr3g0140561 66.667 486 160 2 18 501 26 511 0.0 721
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0924310 AT1G17980.1 77.535 503 111 2 9 511 5 505 0.0 838
Msa0924310 AT4G32850.1 55.821 627 254 6 11 614 16 642 0.0 711
Msa0924310 AT4G32850.9 55.821 627 254 6 11 614 16 642 0.0 711
Msa0924310 AT4G32850.5 55.821 627 254 6 11 614 16 642 0.0 711
Msa0924310 AT4G32850.3 55.821 627 254 6 11 614 16 642 0.0 711
Msa0924310 AT4G32850.8 55.821 627 254 6 11 614 16 642 0.0 711
Msa0924310 AT4G32850.10 55.821 627 254 6 11 614 16 642 0.0 711
Msa0924310 AT4G32850.6 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.2 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.13 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.15 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.16 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.4 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.7 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.17 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.14 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.12 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT4G32850.11 55.821 627 254 6 11 614 16 642 0.0 710
Msa0924310 AT2G25850.4 61.581 544 191 5 17 556 24 553 0.0 708
Msa0924310 AT2G25850.1 61.581 544 191 5 17 556 24 553 0.0 707
Msa0924310 AT2G25850.6 61.581 544 191 5 17 556 24 553 0.0 707
Msa0924310 AT2G25850.7 61.581 544 191 5 17 556 24 553 0.0 707
Msa0924310 AT2G25850.8 61.581 544 191 5 17 556 24 553 0.0 707
Msa0924310 AT2G25850.2 61.581 544 191 5 17 556 24 553 0.0 707
Msa0924310 AT2G25850.3 61.581 544 191 5 17 556 24 553 0.0 707
Msa0924310 AT2G25850.5 61.581 544 191 5 17 556 24 553 0.0 707
Msa0924310 AT2G25850.9 61.581 544 191 5 17 556 24 553 0.0 706
Msa0924310 AT1G17980.2 77.309 379 85 1 133 511 1 378 0.0 638
Msa0924310 AT3G06560.1 35.307 456 274 6 30 484 13 448 3.39e-84 277

Find 219 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAATAGCCTCTGTAATT+TGG 0.082080 6_2:-66076198 None:intergenic
ATAACCATCACCTGAATATT+TGG 0.135587 6_2:-66072814 None:intergenic
CTTCCACCAGTGTTACTTTA+TGG 0.158827 6_2:+66074197 Msa0924310:CDS
CATTGAGATTCATGAGGTTT+TGG 0.192538 6_2:+66072930 Msa0924310:CDS
GTGATGAAATTCAAGTTTAA+TGG 0.194102 6_2:+66072340 Msa0924310:CDS
AATAGTACAAAACTTCAAAT+TGG 0.207341 6_2:-66070492 None:intergenic
TTGCTCGGAATTGTTGATTT+AGG 0.221936 6_2:+66070451 Msa0924310:five_prime_UTR
AACTGTTCACCTTCGCTTAC+TGG 0.225983 6_2:-66074243 None:intergenic
CTATCTCTGGGATTTCTTCT+AGG 0.236839 6_2:-66073288 None:intergenic
GATTACAGAGAAGAAGAAAA+AGG 0.267165 6_2:-66070224 None:intergenic
GCGTTTAGTTCCAAATATTC+AGG 0.278540 6_2:+66072804 Msa0924310:CDS
TGCTCGGAATTGTTGATTTA+GGG 0.279422 6_2:+66070452 Msa0924310:five_prime_UTR
TCTTTAGTGTTAGATGTATC+AGG 0.279655 6_2:-66074789 None:intergenic
GTTGGTCCAGCCAATGAAAT+TGG 0.293988 6_2:-66070901 None:intergenic
TTCCACCAGTGTTACTTTAT+GGG 0.301657 6_2:+66074198 Msa0924310:CDS
CTGCTGTAATGTCTATTTGT+AGG 0.303060 6_2:-66073849 None:intergenic
AATCGAGACACCAACATATT+AGG 0.313637 6_2:-66073177 None:intergenic
AAAATTGTTACATAGATAAA+AGG 0.319123 6_2:-66076528 None:intergenic
TCTTCCACTACCGCAAGATT+TGG 0.320954 6_2:-66074972 None:intergenic
TGATGAGCTTCAACGAGATA+TGG 0.322014 6_2:+66074884 Msa0924310:CDS
TGAATCAGATTGTGAAGATT+TGG 0.322730 6_2:+66071782 Msa0924310:intron
TTACTCTGATTTCCCATTCC+AGG 0.330048 6_2:-66070850 None:intergenic
ATCTTCAGGAACATTCCTAT+TGG 0.331850 6_2:-66074595 None:intergenic
ATAGTACAAAACTTCAAATT+GGG 0.337639 6_2:-66070491 None:intergenic
TGGGTTTAGGAGGATTTCTT+TGG 0.339547 6_2:+66072244 Msa0924310:intron
CAAGAACTAGTAGCACTAAA+AGG 0.342762 6_2:-66074624 None:intergenic
CCCAACCTTTCCATTGTCTA+AGG 0.343802 6_2:-66073885 None:intergenic
GCACAAAGCATGACTGGATT+TGG 0.345010 6_2:-66073228 None:intergenic
TCAACTCATTCATTATCTAA+TGG 0.345747 6_2:+66075023 Msa0924310:CDS
AAAATTTATTAATTTGTTGA+TGG 0.348372 6_2:+66070822 Msa0924310:exon
GGAAGATCAAGTTATTTCTA+AGG 0.348675 6_2:+66074989 Msa0924310:CDS
CCATATTATTCGCAGGTTGC+TGG 0.356851 6_2:+66073087 Msa0924310:intron
AGGTTGAACTTCACATCCTT+AGG 0.362242 6_2:+66076425 Msa0924310:intron
AGTAATGGAAAACAATGGTT+AGG 0.363093 6_2:+66070868 Msa0924310:CDS
ATACCAAGCTTCATATTTCC+TGG 0.368990 6_2:+66074369 Msa0924310:CDS
CTAAAAGGATTTCTATCTTC+AGG 0.371322 6_2:-66074609 None:intergenic
GAATCCCTTCGCCCTGCTAA+TGG 0.373468 6_2:-66071812 None:intergenic
GGAAGTAAAGCGGGTGTACT+TGG 0.373550 6_2:+66074489 Msa0924310:CDS
TAGATTGAGAAGTACACTTA+TGG 0.374942 6_2:+66074123 Msa0924310:intron
TCAAATAGCCTCTGTAATTT+GGG 0.376369 6_2:-66076197 None:intergenic
TTCCATTGTCTAAGGTCGTC+TGG 0.377225 6_2:-66073877 None:intergenic
TCTTCAGGAACATTCCTATT+GGG 0.377495 6_2:-66074594 None:intergenic
AAAGGGTGCGAGCGATGATA+TGG 0.378794 6_2:-66070206 None:intergenic
TCGGTTGGTGAGATTCCTTC+TGG 0.381490 6_2:+66074717 Msa0924310:CDS
GGATAAGCAGGAGTAATTAT+AGG 0.382631 6_2:-66073324 None:intergenic
ATCTCTTGGACTATCGGTTT+GGG 0.383690 6_2:+66073263 Msa0924310:CDS
CTTTCTCTTCCTTTCATCAT+CGG 0.398080 6_2:-66074514 None:intergenic
AATGGTGCTGTCAGCTCAGC+AGG 0.401653 6_2:-66075707 None:intergenic
GATCTCTTGGACTATCGGTT+TGG 0.403460 6_2:+66073262 Msa0924310:CDS
GATAACTGAGCCAATTTCAT+TGG 0.408497 6_2:+66070891 Msa0924310:CDS
AAAAGTTCGATAAAAGTTGA+TGG 0.411168 6_2:-66076580 None:intergenic
TCAAGAATTCATCAAGTTGA+AGG 0.413467 6_2:+66070373 Msa0924310:five_prime_UTR
CATTAGATGATATCTATCTC+TGG 0.413765 6_2:-66073301 None:intergenic
GCATCAAGTTGTTTGTTATC+CGG 0.416100 6_2:-66074765 None:intergenic
ATCTTGCAGGTGCATGGTCC+TGG 0.416913 6_2:+66072086 Msa0924310:intron
CACAGAAGAAGCCTCTTATC+AGG 0.419182 6_2:+66075756 Msa0924310:CDS
GTTCAGTACTTGCAAGGTGC+TGG 0.419977 6_2:+66071204 Msa0924310:intron
TTCTCACCGTTTACTTTAGA+CGG 0.421644 6_2:-66074411 None:intergenic
GGAGGCTAGCAAAGCTGATT+GGG 0.423680 6_2:+66073780 Msa0924310:CDS
TGGAGGCTAGCAAAGCTGAT+TGG 0.425422 6_2:+66073779 Msa0924310:CDS
AAATTTATTAATTTGTTGAT+GGG 0.434523 6_2:+66070823 Msa0924310:exon
GGAGGAGGTGCTTGGCAGAC+TGG 0.436908 6_2:+66071260 Msa0924310:CDS
GTTGGTAGGGAGGAGGTGCT+TGG 0.437236 6_2:+66071252 Msa0924310:CDS
AGAAATCAAGTCAATGATAA+TGG 0.438511 6_2:+66074912 Msa0924310:CDS
AAATCCAAATCTTGCGGTAG+TGG 0.439944 6_2:+66074968 Msa0924310:CDS
GATGAGCTTCAACGAGATAT+GGG 0.441070 6_2:+66074885 Msa0924310:CDS
GCTATTGAAGAAGGATCTCT+TGG 0.442160 6_2:+66073249 Msa0924310:CDS
ACCTTAGACAATGGAAAGGT+TGG 0.442976 6_2:+66073884 Msa0924310:CDS
CGAGAAACCCTGTCTGAAAT+CGG 0.444510 6_2:+66074698 Msa0924310:CDS
GAATCAGATTGTGAAGATTT+GGG 0.444681 6_2:+66071783 Msa0924310:intron
TTCATTATCTAATGGAGGCT+TGG 0.445655 6_2:+66075031 Msa0924310:CDS
TGATCTCCTGTATGCAAGAT+TGG 0.446198 6_2:+66072372 Msa0924310:CDS
GAGACGCGGATGTCCATTCC+AGG 0.447283 6_2:-66074327 None:intergenic
TGCGAGCGATGATATGGCTT+TGG 0.451794 6_2:-66070200 None:intergenic
ACATCTCTGGTTGCATGTCT+AGG 0.454924 6_2:-66072137 None:intergenic
TTTGTCACATCTTCCTCAGT+TGG 0.455777 6_2:-66070919 None:intergenic
TCTCCGCCAGTTGACATTGA+AGG 0.456885 6_2:+66073918 Msa0924310:CDS
ATATCTCGTTGAAGCTCATC+AGG 0.457387 6_2:-66074882 None:intergenic
CATCTGTATCCCCTCCCAAT+AGG 0.457617 6_2:+66074580 Msa0924310:CDS
GAAGGGATTCAATGAACAAC+TGG 0.460454 6_2:+66071825 Msa0924310:CDS
CTTCAGTGTCATCCGTATCC+TGG 0.464191 6_2:+66074150 Msa0924310:CDS
GTTATCCGGCGCTGATCCAT+TGG 0.464992 6_2:-66074751 None:intergenic
TCAATAGCACAAAGCATGAC+TGG 0.467641 6_2:-66073234 None:intergenic
GGTTGAACTTCACATCCTTA+GGG 0.468725 6_2:+66076426 Msa0924310:intron
TTCTTCTGTGGTACAGGAGC+AGG 0.468957 6_2:-66075743 None:intergenic
ACTGAGCCAATTTCATTGGC+TGG 0.469138 6_2:+66070895 Msa0924310:CDS
GTCAGCAGGAGGCAGTTGGT+AGG 0.469915 6_2:+66071238 Msa0924310:CDS
ACGGAAGGTCGAACGCCGCC+AGG 0.470088 6_2:-66074387 None:intergenic
TATTGTCCATACCTGATAAG+AGG 0.470151 6_2:-66075767 None:intergenic
GAGTTCATGCAAGGATAAGC+AGG 0.471704 6_2:-66073336 None:intergenic
CTGATGAAGAAGAAAGGAAA+GGG 0.472712 6_2:-66070154 None:intergenic
ATGCTTTGTGCTATTGAAGA+AGG 0.478933 6_2:+66073240 Msa0924310:CDS
TCTGAAAATTCGCCAGGATA+CGG 0.480072 6_2:-66074162 None:intergenic
TTTGGGTGAAAACCATTAGC+AGG 0.480623 6_2:+66071800 Msa0924310:CDS
ATAGACGAAGTTCAAAATCA+AGG 0.482214 6_2:+66074433 Msa0924310:CDS
GTTATACCTTCAATGTCAAC+TGG 0.483288 6_2:-66073924 None:intergenic
ATTATGCTTGAATTCTTCTA+CGG 0.483355 6_2:-66074280 None:intergenic
AAAGACTCGTGAACTTGAAA+AGG 0.483518 6_2:+66070939 Msa0924310:CDS
AGTTCAAAATCAAGGGTTGC+TGG 0.483650 6_2:+66074441 Msa0924310:CDS
ATAAATCTGGCATTGCTTGT+TGG 0.485761 6_2:+66073123 Msa0924310:CDS
GAATTGTTGATTTAGGGTTA+CGG 0.485828 6_2:+66070458 Msa0924310:five_prime_UTR
AAGGTGAACAGTTTGATATA+AGG 0.486017 6_2:+66074253 Msa0924310:CDS
TCCGTTCCGTCTAAAGTAAA+CGG 0.488834 6_2:+66074405 Msa0924310:CDS
AGAAGGATCTCTTGGACTAT+CGG 0.489165 6_2:+66073257 Msa0924310:CDS
ATTATCTAATGGAGGCTTGG+AGG 0.489261 6_2:+66075034 Msa0924310:CDS
AGAGGCTTCTTCTGTGGTAC+AGG 0.492107 6_2:-66075749 None:intergenic
GCGTACACTGCATGGAAACC+TGG 0.492579 6_2:+66074309 Msa0924310:CDS
GCCATCGAGCATATCATGTC+TGG 0.493767 6_2:+66074825 Msa0924310:CDS
TACTCTGATTTCCCATTCCA+GGG 0.497352 6_2:-66070849 None:intergenic
TTGATGGGGATCCCTGGAAT+GGG 0.498382 6_2:+66070838 Msa0924310:exon
AATTTGTTGATGGGGATCCC+TGG 0.499052 6_2:+66070832 Msa0924310:exon
CAAATTACAGAGGCTATTTG+AGG 0.499781 6_2:+66076199 Msa0924310:CDS
GGAGGCAGTTGGTAGGGAGG+AGG 0.500492 6_2:+66071245 Msa0924310:CDS
ATCACAGGGACATGAGCATC+AGG 0.501815 6_2:-66072322 None:intergenic
GTAATGGAAAACAATGGTTA+GGG 0.502287 6_2:+66070869 Msa0924310:CDS
GCAACATTATCATACATCTC+TGG 0.504699 6_2:-66072150 None:intergenic
GGAGCCAAAAGTGAAAATCT+TGG 0.506962 6_2:-66071863 None:intergenic
GTTGATGGGGATCCCTGGAA+TGG 0.507469 6_2:+66070837 Msa0924310:exon
CTCACCAACCGATTTCAGAC+AGG 0.507788 6_2:-66074706 None:intergenic
GATTTGTCTGAAAATTCGCC+AGG 0.508754 6_2:-66074168 None:intergenic
CCTTAGACAATGGAAAGGTT+GGG 0.509451 6_2:+66073885 Msa0924310:CDS
AAGGAAGAGAAAGCGATTGG+AGG 0.509694 6_2:+66074524 Msa0924310:CDS
GGGACATGAGCATCAGGCAC+AGG 0.513982 6_2:-66072316 None:intergenic
GTGGTATTTGTAGGCTATGG+AGG 0.514598 6_2:+66073762 Msa0924310:intron
TTTCACAAATTCATTCATCT+GGG 0.515789 6_2:+66070419 Msa0924310:five_prime_UTR
GTATGCAAGATTGGCATTGT+GGG 0.518685 6_2:+66072381 Msa0924310:CDS
TGAAAGGAAGAGAAAGCGAT+TGG 0.520091 6_2:+66074521 Msa0924310:CDS
TCAGCAGGAGGCAGTTGGTA+GGG 0.520612 6_2:+66071239 Msa0924310:CDS
ATTCAATGAACAACTGGTGC+AGG 0.523694 6_2:+66071831 Msa0924310:CDS
TGGAGGCTTGGAGGAGCTTG+AGG 0.528787 6_2:+66075043 Msa0924310:CDS
GATATGCTGATGAAGAAGAA+AGG 0.532179 6_2:-66070160 None:intergenic
ATGTAAACGCGTACACTGCA+TGG 0.533054 6_2:+66074301 Msa0924310:CDS
TGTATGCAAGATTGGCATTG+TGG 0.533196 6_2:+66072380 Msa0924310:CDS
TACTTGGAGCCGATGATGAA+AGG 0.536484 6_2:+66074505 Msa0924310:CDS
AAAGCTTGATGCGCTTCATA+CGG 0.537157 6_2:-66074849 None:intergenic
AATTTATTAATTTGTTGATG+GGG 0.538040 6_2:+66070824 Msa0924310:exon
GCAGGAGGCAGTTGGTAGGG+AGG 0.538560 6_2:+66071242 Msa0924310:CDS
GGTGCTTGGCAGACTGGACC+AGG 0.538851 6_2:+66071266 Msa0924310:CDS
ATTAGATGATATCTATCTCT+GGG 0.544096 6_2:-66073300 None:intergenic
TGGAGGATAATAATAACTCA+AGG 0.545041 6_2:+66074541 Msa0924310:CDS
TAGACGAAGTTCAAAATCAA+GGG 0.546567 6_2:+66074434 Msa0924310:CDS
GGAATGGGAAATCAGAGTAA+TGG 0.546702 6_2:+66070853 Msa0924310:CDS
ACTCATTCATTATCTAATGG+AGG 0.549926 6_2:+66075026 Msa0924310:CDS
TCTGGGTCATCGTGATTGCT+CGG 0.550403 6_2:+66070436 Msa0924310:five_prime_UTR
CAGGAACATTCCTATTGGGA+GGG 0.552467 6_2:-66074590 None:intergenic
ACAGAAGATGCTATCTGAGA+TGG 0.554931 6_2:+66072273 Msa0924310:CDS
TGAGAATATATATGTTTCAC+CGG 0.556670 6_2:+66076613 Msa0924310:three_prime_UTR
AGGGTATCTATATCCGCTCC+AGG 0.558973 6_2:-66072104 None:intergenic
GAGTATATACTCAGTGGCGA+TGG 0.559198 6_2:+66073205 Msa0924310:CDS
GAAAACCATTAGCAGGGCGA+AGG 0.559917 6_2:+66071807 Msa0924310:CDS
TTAAACTTGAATTTCATCAC+AGG 0.560441 6_2:-66072337 None:intergenic
CCGCCAGGAAATATGAAGCT+TGG 0.561384 6_2:-66074372 None:intergenic
AAGTCTCAAGGAAGTAAAGC+GGG 0.561568 6_2:+66074480 Msa0924310:CDS
GAGAGTCAGCAGGAGGCAGT+TGG 0.561773 6_2:+66071234 Msa0924310:CDS
AACATATTAGGAAGTGCGTT+AGG 0.562376 6_2:-66073165 None:intergenic
ATGGGTCTGCAGCGTAAGCA+AGG 0.566647 6_2:+66074216 Msa0924310:CDS
ACAATGCCAATCTTGCATAC+AGG 0.568625 6_2:-66072378 None:intergenic
ATCCAGACGACCTTAGACAA+TGG 0.568936 6_2:+66073875 Msa0924310:CDS
CACTGCATGGAAACCTGGAA+TGG 0.570143 6_2:+66074314 Msa0924310:CDS
GATATAGATACCCTTTGTGT+AGG 0.571052 6_2:+66072113 Msa0924310:CDS
CTCTTCAAATCCAAATCTTG+CGG 0.571460 6_2:+66074962 Msa0924310:CDS
CTACGAATCTTGCAGGTGCA+TGG 0.572631 6_2:+66072080 Msa0924310:intron
TAACGCACTTCCTAATATGT+TGG 0.574662 6_2:+66073167 Msa0924310:CDS
TTCATTGGCTGGACCAACTG+AGG 0.578208 6_2:+66070906 Msa0924310:CDS
ACCGTTTACTTTAGACGGAA+CGG 0.578621 6_2:-66074406 None:intergenic
AGGAACATTCCTATTGGGAG+GGG 0.579237 6_2:-66074589 None:intergenic
TTGGTTACACTTACACCAGA+AGG 0.580585 6_2:-66074732 None:intergenic
ATGTCTAGGTCCTACACAAA+GGG 0.581429 6_2:-66072123 None:intergenic
TCAGGAACATTCCTATTGGG+AGG 0.582232 6_2:-66074591 None:intergenic
TAGTACAAAACTTCAAATTG+GGG 0.583507 6_2:-66070490 None:intergenic
GCTGATGAAGAAGAAAGGAA+AGG 0.585497 6_2:-66070155 None:intergenic
TCACCAACCGATTTCAGACA+GGG 0.590667 6_2:-66074705 None:intergenic
TTTACTTTAGACGGAACGGA+AGG 0.592044 6_2:-66074402 None:intergenic
AAACCCTGTCTGAAATCGGT+TGG 0.595123 6_2:+66074702 Msa0924310:CDS
TAGCCTCTGTAATTTGGGCG+AGG 0.596121 6_2:-66076192 None:intergenic
AATCAAGTCAATGATAATGG+TGG 0.599209 6_2:+66074915 Msa0924310:CDS
CTGTGTGTTCAGTACTTGCA+AGG 0.601170 6_2:+66071198 Msa0924310:intron
GAAGATGCTATCTGAGATGG+AGG 0.602586 6_2:+66072276 Msa0924310:CDS
CAAGGAGTTCCAGTAAGCGA+AGG 0.604786 6_2:+66074234 Msa0924310:CDS
GGAGGATAATAATAACTCAA+GGG 0.605118 6_2:+66074542 Msa0924310:CDS
CATGTCTAGGTCCTACACAA+AGG 0.605652 6_2:-66072124 None:intergenic
CTGATAAGAGGCTTCTTCTG+TGG 0.607608 6_2:-66075755 None:intergenic
TCTGGTGTAAGTGTAACCAA+TGG 0.607660 6_2:+66074735 Msa0924310:CDS
TGTAACCAATGGATCAGCGC+CGG 0.609814 6_2:+66074746 Msa0924310:CDS
TTGGGTGAAAACCATTAGCA+GGG 0.613271 6_2:+66071801 Msa0924310:CDS
AGTCAATCTGAAAAGTCTCA+AGG 0.619425 6_2:+66074468 Msa0924310:CDS
TGGATTGTATGAGAGTCAGC+AGG 0.620641 6_2:+66071224 Msa0924310:CDS
AAAACCATTAGCAGGGCGAA+GGG 0.624241 6_2:+66071808 Msa0924310:CDS
GGACATGAGCATCAGGCACA+GGG 0.624494 6_2:-66072315 None:intergenic
TTATGTCAGATGAGTTCAAG+AGG 0.631066 6_2:+66073391 Msa0924310:CDS
GCAGGTGCATGGTCCTGGAG+CGG 0.634301 6_2:+66072091 Msa0924310:intron
CAGACCGTTCTCAGTCTCAA+CGG 0.637873 6_2:+66072757 Msa0924310:CDS
GGGAGGGGATACAGATGCAG+AGG 0.638680 6_2:-66074574 None:intergenic
GCAGGACTTAGATATATCAC+AGG 0.640450 6_2:+66072708 Msa0924310:intron
CATAAAGTAACACTGGTGGA+AGG 0.640783 6_2:-66074196 None:intergenic
GCACAACATTGAGATTCATG+AGG 0.640999 6_2:+66072924 Msa0924310:CDS
TGACTCTGAAGTCAATAGCA+TGG 0.641386 6_2:+66074662 Msa0924310:CDS
TAAACTTGAATTTCATCACA+GGG 0.641698 6_2:-66072336 None:intergenic
TATGTCAGATGAGTTCAAGA+GGG 0.642723 6_2:+66073392 Msa0924310:CDS
GACCCATAAAGTAACACTGG+TGG 0.649662 6_2:-66074200 None:intergenic
GCAGGAATCCCACAAAACAA+TGG 0.650878 6_2:-66075725 None:intergenic
GCAGACCCATAAAGTAACAC+TGG 0.652223 6_2:-66074203 None:intergenic
GAAGTGCGTTAGGATAAAGC+TGG 0.655196 6_2:-66073155 None:intergenic
ATGAGCTTCAACGAGATATG+GGG 0.656210 6_2:+66074886 Msa0924310:CDS
ACATCCGTTGAGACTGAGAA+CGG 0.658881 6_2:-66072761 None:intergenic
ATCAGAGTAATGGAAAACAA+TGG 0.661390 6_2:+66070863 Msa0924310:CDS
TTGTAAGTAGAGTTCATGCA+AGG 0.665172 6_2:-66073345 None:intergenic
ACCAGACATGATATGCTCGA+TGG 0.670552 6_2:-66074826 None:intergenic
GACGACCTTAGACAATGGAA+AGG 0.674975 6_2:+66073880 Msa0924310:CDS
TCTTTAGAGTATATACTCAG+TGG 0.676098 6_2:+66073199 Msa0924310:CDS
ATACCTTCAATGTCAACTGG+CGG 0.676326 6_2:-66073921 None:intergenic
GAGGGGAACTGAAATATGTG+AGG 0.677534 6_2:+66073410 Msa0924310:CDS
CACATCCTTAGGGAAAGCAG+TGG 0.680740 6_2:+66076436 Msa0924310:CDS
ATGTCAGATGAGTTCAAGAG+GGG 0.684064 6_2:+66073393 Msa0924310:CDS
AAAGTCTCAAGGAAGTAAAG+CGG 0.684248 6_2:+66074479 Msa0924310:CDS
AGACCTCGCCCAAATTACAG+AGG 0.686860 6_2:+66076189 Msa0924310:CDS
ATTGTATGAGAGTCAGCAGG+AGG 0.695715 6_2:+66071227 Msa0924310:CDS
CCAAGCTTCATATTTCCTGG+CGG 0.705009 6_2:+66074372 Msa0924310:CDS
GACGTTTCACATGAGAGACG+CGG 0.736625 6_2:-66074341 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAAATTAAAAATA+AGG - chr6_2:66070280-66070299 None:intergenic 0.0%
!!! TTGTTTTTATTTGAATTTAT+TGG + chr6_2:66070700-66070719 Msa0924310:five_prime_UTR 10.0%
!!! AAAATTTATTAATTTGTTGA+TGG + chr6_2:66070822-66070841 Msa0924310:exon 10.0%
!!! AAATTTATTAATTTGTTGAT+GGG + chr6_2:66070823-66070842 Msa0924310:exon 10.0%
!! AAAAAATCATTATTACTAAA+TGG - chr6_2:66072684-66072703 None:intergenic 10.0%
!!! ATAATAATAATGAACAATTT+TGG - chr6_2:66073032-66073051 None:intergenic 10.0%
!!! ATTAATTGACAATATTTTTA+TGG - chr6_2:66073480-66073499 None:intergenic 10.0%
!! TTTATAATGAATAAAAATCA+TGG - chr6_2:66073628-66073647 None:intergenic 10.0%
!!! TAAAAATTTCATATTTTGAT+TGG + chr6_2:66074023-66074042 Msa0924310:intron 10.0%
!! TTATAATAAAAGATAAACTA+AGG + chr6_2:66075307-66075326 Msa0924310:intron 10.0%
!! AAGAACAAAAAAAATAAAAA+AGG - chr6_2:66075674-66075693 None:intergenic 10.0%
!!! TTTTATTTTTTTTGTTCTTT+TGG + chr6_2:66075675-66075694 Msa0924310:intron 10.0%
!! TTAAATTCTTTATATATCAA+TGG + chr6_2:66076286-66076305 Msa0924310:intron 10.0%
!!! TTTTTACGATAATAACAAAA+GGG - chr6_2:66070566-66070585 None:intergenic 15.0%
!!! TCTTTTTTTTTTCAATGATA+GGG - chr6_2:66070776-66070795 None:intergenic 15.0%
!!! ATCTTTTTTTTTTCAATGAT+AGG - chr6_2:66070777-66070796 None:intergenic 15.0%
!!! AATTTATTAATTTGTTGATG+GGG + chr6_2:66070824-66070843 Msa0924310:exon 15.0%
!!! TTTTATTCTATCTTAGAAAT+AGG + chr6_2:66071320-66071339 Msa0924310:intron 15.0%
!! TTTATTCTATCTTAGAAATA+GGG + chr6_2:66071321-66071340 Msa0924310:intron 15.0%
!!! TGCAAAAATATTAATACTTT+TGG + chr6_2:66072427-66072446 Msa0924310:intron 15.0%
!!! GCAAAAATATTAATACTTTT+GGG + chr6_2:66072428-66072447 Msa0924310:intron 15.0%
!!! AATTTGTATGCTTTATTTTT+TGG + chr6_2:66072523-66072542 Msa0924310:intron 15.0%
!! TATTGTCAATTAATTTATGT+AGG + chr6_2:66073486-66073505 Msa0924310:intron 15.0%
!!! TTTTAAAATGTTTTCGTAAA+AGG + chr6_2:66073549-66073568 Msa0924310:intron 15.0%
!! AAATAGTTATATATATGATG+AGG + chr6_2:66075142-66075161 Msa0924310:intron 15.0%
!! ACAAAATAAGTAAAAAGAAA+TGG - chr6_2:66075560-66075579 None:intergenic 15.0%
!!! ACTAATTTTTAATAACCATT+TGG + chr6_2:66075847-66075866 Msa0924310:intron 15.0%
!! TTATGTTATAATATACCAAA+TGG - chr6_2:66075865-66075884 None:intergenic 15.0%
!! ATAAGAAAAACACAAATATT+TGG + chr6_2:66076059-66076078 Msa0924310:intron 15.0%
!! TAAGAAAAACACAAATATTT+GGG + chr6_2:66076060-66076079 Msa0924310:intron 15.0%
!!! AATATTTTAACCTTTTACAA+AGG - chr6_2:66076101-66076120 None:intergenic 15.0%
!! ATATTAAGAATCCAAATTTA+AGG + chr6_2:66076116-66076135 Msa0924310:intron 15.0%
!! TATTAAGAATCCAAATTTAA+GGG + chr6_2:66076117-66076136 Msa0924310:intron 15.0%
!! AAAATTGTTACATAGATAAA+AGG - chr6_2:66076531-66076550 None:intergenic 15.0%
!!! TTTTATCTATGTAACAATTT+TGG + chr6_2:66076530-66076549 Msa0924310:three_prime_UTR 15.0%
!!! AAAATCTAATTTTATTTAGC+CGG - chr6_2:66076635-66076654 None:intergenic 15.0%
!! AAATAAGGAATGAAATTAGA+AGG - chr6_2:66070265-66070284 None:intergenic 20.0%
!!! TTTATATTTTGAAGCTTTCA+AGG + chr6_2:66070337-66070356 Msa0924310:intron 20.0%
!! ATAGTACAAAACTTCAAATT+GGG - chr6_2:66070494-66070513 None:intergenic 20.0%
!! AATAGTACAAAACTTCAAAT+TGG - chr6_2:66070495-66070514 None:intergenic 20.0%
!!! CTTTTTACGATAATAACAAA+AGG - chr6_2:66070567-66070586 None:intergenic 20.0%
!! TGTAAGGAAAACAATAAAAA+TGG - chr6_2:66072050-66072069 None:intergenic 20.0%
!!! ATAAAATATGTGTTTTGTTC+TGG + chr6_2:66072623-66072642 Msa0924310:intron 20.0%
!!! AATAATGATTTTTTATGTGC+AGG + chr6_2:66072690-66072709 Msa0924310:intron 20.0%
!! TTTGTTCTTATTGTGATATT+TGG + chr6_2:66073719-66073738 Msa0924310:intron 20.0%
!! TTGTTCTTATTGTGATATTT+GGG + chr6_2:66073720-66073739 Msa0924310:intron 20.0%
!! TTGCTTAAATTTAATGTTTG+TGG + chr6_2:66073743-66073762 Msa0924310:intron 20.0%
!! AATGACATAGCAAAATTATA+AGG - chr6_2:66073993-66074012 None:intergenic 20.0%
!! TTCTTCAATAAAATGTTATG+CGG + chr6_2:66075112-66075131 Msa0924310:intron 20.0%
!! AATTCATATTGTTTCAATGA+GGG + chr6_2:66075173-66075192 Msa0924310:intron 20.0%
!!! TTACATTTATTTTGTCACTT+AGG + chr6_2:66075202-66075221 Msa0924310:intron 20.0%
!! CTGAAATAAAACAATTGTTA+AGG - chr6_2:66075584-66075603 None:intergenic 20.0%
!! CATAATCTATATGAGTTTAA+TGG + chr6_2:66075880-66075899 Msa0924310:intron 20.0%
!!! ATTTGTGTTTTTCTTATTGA+GGG - chr6_2:66076056-66076075 None:intergenic 20.0%
!!! TATTTGTGTTTTTCTTATTG+AGG - chr6_2:66076057-66076076 None:intergenic 20.0%
!! ATTAAGAATCCAAATTTAAG+GGG + chr6_2:66076118-66076137 Msa0924310:intron 20.0%
!!! ATGACTATGTAAAACTTTTT+GGG - chr6_2:66076232-66076251 None:intergenic 20.0%
!! AACCTAAATAACAACATTAA+AGG - chr6_2:66076367-66076386 None:intergenic 20.0%
! ATTACAGAGAAGAAGAAAAA+GGG - chr6_2:66070226-66070245 None:intergenic 25.0%
!! TTTTCACAAATTCATTCATC+TGG + chr6_2:66070418-66070437 Msa0924310:five_prime_UTR 25.0%
! TTTCACAAATTCATTCATCT+GGG + chr6_2:66070419-66070438 Msa0924310:five_prime_UTR 25.0%
! TAGTACAAAACTTCAAATTG+GGG - chr6_2:66070493-66070512 None:intergenic 25.0%
!!! GTGTTATTTTCTACTGAATT+TGG + chr6_2:66071172-66071191 Msa0924310:intron 25.0%
! ATAAACCGATATAGTTTCTA+GGG + chr6_2:66071363-66071382 Msa0924310:intron 25.0%
!! TTAAATCGTGTTGTTAATTG+TGG + chr6_2:66071448-66071467 Msa0924310:intron 25.0%
!! TTCTAAATAAAAGCGTATCA+CGG + chr6_2:66071540-66071559 Msa0924310:intron 25.0%
! AATCACTACAATCAGTATAT+CGG - chr6_2:66071680-66071699 None:intergenic 25.0%
! GGATATTACGAAATGTATAT+AGG - chr6_2:66072029-66072048 None:intergenic 25.0%
!! TCGTAGTGAAAAATTTTGTA+AGG - chr6_2:66072066-66072085 None:intergenic 25.0%
!! ACTGTTATTGTCATTTACAT+TGG + chr6_2:66072224-66072243 Msa0924310:intron 25.0%
!! CTGTTATTGTCATTTACATT+GGG + chr6_2:66072225-66072244 Msa0924310:intron 25.0%
! TAAACTTGAATTTCATCACA+GGG - chr6_2:66072339-66072358 None:intergenic 25.0%
! TTAAACTTGAATTTCATCAC+AGG - chr6_2:66072340-66072359 None:intergenic 25.0%
!! GTGATGAAATTCAAGTTTAA+TGG + chr6_2:66072340-66072359 Msa0924310:CDS 25.0%
! TTTGCATAGAAAACTTACTT+CGG - chr6_2:66072413-66072432 None:intergenic 25.0%
! ATTGATATAATCATGCATGA+TGG + chr6_2:66072993-66073012 Msa0924310:intron 25.0%
! ATATGGCAAAAAGATACTTT+AGG - chr6_2:66073073-66073092 None:intergenic 25.0%
! ATTAGATGATATCTATCTCT+GGG - chr6_2:66073303-66073322 None:intergenic 25.0%
! GAAGCAGTAACATTAATAAA+TGG + chr6_2:66073508-66073527 Msa0924310:intron 25.0%
!! ATTTTATCGATCTGATAGTT+TGG + chr6_2:66073602-66073621 Msa0924310:intron 25.0%
! TTAATGTTTGTGGTATTTGT+AGG + chr6_2:66073753-66073772 Msa0924310:intron 25.0%
! TCTTGTAAGCTTCAAAAAAT+GGG - chr6_2:66073825-66073844 None:intergenic 25.0%
! TTCTTGTAAGCTTCAAAAAA+TGG - chr6_2:66073826-66073845 None:intergenic 25.0%
!! TGATTCTCGATTTGAAAAAT+AGG + chr6_2:66074074-66074093 Msa0924310:intron 25.0%
! ATTATGCTTGAATTCTTCTA+CGG - chr6_2:66074283-66074302 None:intergenic 25.0%
! AGAAATCAAGTCAATGATAA+TGG + chr6_2:66074912-66074931 Msa0924310:CDS 25.0%
! TCAACTCATTCATTATCTAA+TGG + chr6_2:66075023-66075042 Msa0924310:CDS 25.0%
! TTGAGGTTAATCTCTTATTA+TGG + chr6_2:66075060-66075079 Msa0924310:intron 25.0%
! CTCTTATTATGGCTTATATT+TGG + chr6_2:66075071-66075090 Msa0924310:intron 25.0%
! GAATTCATATTGTTTCAATG+AGG + chr6_2:66075172-66075191 Msa0924310:intron 25.0%
! TTTGGATAAAACACTTACTT+AGG + chr6_2:66075230-66075249 Msa0924310:intron 25.0%
! GAAAATTACAAGTTGTTTAG+TGG + chr6_2:66075615-66075634 Msa0924310:intron 25.0%
!! TAACTGCAAAAAGTTTTACA+TGG - chr6_2:66075989-66076008 None:intergenic 25.0%
!! TGACTATGTAAAACTTTTTG+GGG - chr6_2:66076231-66076250 None:intergenic 25.0%
!! GATGACTATGTAAAACTTTT+TGG - chr6_2:66076233-66076252 None:intergenic 25.0%
!!! CTCCTTTAATGTTGTTATTT+AGG + chr6_2:66076362-66076381 Msa0924310:intron 25.0%
!!! GTTGTTATTTAGGTTAATCT+TGG + chr6_2:66076372-66076391 Msa0924310:intron 25.0%
! TAATCTTGGCTAAATTTAGT+TGG + chr6_2:66076386-66076405 Msa0924310:intron 25.0%
!!! ATAAAAGTTGATGGCTTTTT+AGG - chr6_2:66076574-66076593 None:intergenic 25.0%
! AAAAGTTCGATAAAAGTTGA+TGG - chr6_2:66076583-66076602 None:intergenic 25.0%
! TGAGAATATATATGTTTCAC+CGG + chr6_2:66076613-66076632 Msa0924310:three_prime_UTR 25.0%
GATTACAGAGAAGAAGAAAA+AGG - chr6_2:66070227-66070246 None:intergenic 30.0%
AAGGAATGAAATTAGAAGGT+AGG - chr6_2:66070261-66070280 None:intergenic 30.0%
!! TCAAGAATTCATCAAGTTGA+AGG + chr6_2:66070373-66070392 Msa0924310:five_prime_UTR 30.0%
!! GAATTGTTGATTTAGGGTTA+CGG + chr6_2:66070458-66070477 Msa0924310:five_prime_UTR 30.0%
TCGTAAAAAGTTCATAGCTT+TGG + chr6_2:66070577-66070596 Msa0924310:five_prime_UTR 30.0%
!! AAAAAGTTCATAGCTTTGGA+AGG + chr6_2:66070581-66070600 Msa0924310:five_prime_UTR 30.0%
! ATCAGAGTAATGGAAAACAA+TGG + chr6_2:66070863-66070882 Msa0924310:CDS 30.0%
! AGTAATGGAAAACAATGGTT+AGG + chr6_2:66070868-66070887 Msa0924310:CDS 30.0%
! GTAATGGAAAACAATGGTTA+GGG + chr6_2:66070869-66070888 Msa0924310:CDS 30.0%
ATTGCATCAACAACTAAACA+AGG - chr6_2:66071296-66071315 None:intergenic 30.0%
GATAAACCGATATAGTTTCT+AGG + chr6_2:66071362-66071381 Msa0924310:intron 30.0%
TGAATCAGATTGTGAAGATT+TGG + chr6_2:66071782-66071801 Msa0924310:intron 30.0%
GAATCAGATTGTGAAGATTT+GGG + chr6_2:66071783-66071802 Msa0924310:intron 30.0%
! AATGCCAAGATTTTCACTTT+TGG + chr6_2:66071859-66071878 Msa0924310:CDS 30.0%
! TTGTCATTTACATTGGGTTT+AGG + chr6_2:66072231-66072250 Msa0924310:intron 30.0%
TTGCATAGAAAACTTACTTC+GGG - chr6_2:66072412-66072431 None:intergenic 30.0%
ATAACCATCACCTGAATATT+TGG - chr6_2:66072817-66072836 None:intergenic 30.0%
! ATTTACGTCAAGATTTTGTG+TGG + chr6_2:66072855-66072874 Msa0924310:intron 30.0%
! ATTGAGATTCATGAGGTTTT+GGG + chr6_2:66072931-66072950 Msa0924310:CDS 30.0%
!! TCTTTAGAGTATATACTCAG+TGG + chr6_2:66073199-66073218 Msa0924310:CDS 30.0%
CATTAGATGATATCTATCTC+TGG - chr6_2:66073304-66073323 None:intergenic 30.0%
TGAGGTATGATATGATATGT+TGG + chr6_2:66073428-66073447 Msa0924310:intron 30.0%
TATTTCCACTTACTGAGATA+AGG + chr6_2:66073671-66073690 Msa0924310:intron 30.0%
TAAGCTTCAAAAAATGGGTA+CGG - chr6_2:66073820-66073839 None:intergenic 30.0%
CAATCTACAAGATTCAAACA+AGG - chr6_2:66074110-66074129 None:intergenic 30.0%
! TAGATTGAGAAGTACACTTA+TGG + chr6_2:66074123-66074142 Msa0924310:intron 30.0%
AAGGTGAACAGTTTGATATA+AGG + chr6_2:66074253-66074272 Msa0924310:CDS 30.0%
ATAGACGAAGTTCAAAATCA+AGG + chr6_2:66074433-66074452 Msa0924310:CDS 30.0%
TAGACGAAGTTCAAAATCAA+GGG + chr6_2:66074434-66074453 Msa0924310:CDS 30.0%
TGGAGGATAATAATAACTCA+AGG + chr6_2:66074541-66074560 Msa0924310:CDS 30.0%
GGAGGATAATAATAACTCAA+GGG + chr6_2:66074542-66074561 Msa0924310:CDS 30.0%
CTAAAAGGATTTCTATCTTC+AGG - chr6_2:66074612-66074631 None:intergenic 30.0%
TCTTTAGTGTTAGATGTATC+AGG - chr6_2:66074792-66074811 None:intergenic 30.0%
!! AATCAAGTCAATGATAATGG+TGG + chr6_2:66074915-66074934 Msa0924310:CDS 30.0%
!! GGAAGATCAAGTTATTTCTA+AGG + chr6_2:66074989-66075008 Msa0924310:CDS 30.0%
ACTCATTCATTATCTAATGG+AGG + chr6_2:66075026-66075045 Msa0924310:CDS 30.0%
ATTAGTTATCCTGAAGAGTA+TGG + chr6_2:66075357-66075376 Msa0924310:intron 30.0%
AACTTATTTCCATACTCTTC+AGG - chr6_2:66075369-66075388 None:intergenic 30.0%
!! GATTGGATTGTCTTATTTAC+TGG - chr6_2:66075454-66075473 None:intergenic 30.0%
TAACATTGTACTTGTCATAG+TGG + chr6_2:66075798-66075817 Msa0924310:intron 30.0%
!!! ATAGTGGACCAATTGATTTT+TGG + chr6_2:66075814-66075833 Msa0924310:intron 30.0%
ATTGCAGACCAAAAATCAAT+TGG - chr6_2:66075825-66075844 None:intergenic 30.0%
GCACTATAGTCATATATGAT+TGG - chr6_2:66075922-66075941 None:intergenic 30.0%
!! TCGATTTGTTGAGATATCTT+AGG - chr6_2:66075963-66075982 None:intergenic 30.0%
TCAAATAGCCCTTGTAATTT+CGG + chr6_2:66076014-66076033 Msa0924310:intron 30.0%
TCTGAAAAAGCCTTTGTAAA+AGG + chr6_2:66076088-66076107 Msa0924310:intron 30.0%
TCAAATAGCCTCTGTAATTT+GGG - chr6_2:66076200-66076219 None:intergenic 30.0%
! TTGAGATATTTTATCAGTGC+AGG + chr6_2:66076259-66076278 Msa0924310:intron 30.0%
TATTAGAAGTTGCTCCATTA+TGG + chr6_2:66076310-66076329 Msa0924310:intron 30.0%
GAATGAATTGCTATCCATAA+TGG - chr6_2:66076327-66076346 None:intergenic 30.0%
TGAAGTTCAACCTGAAAATA+AGG - chr6_2:66076418-66076437 None:intergenic 30.0%
!! CTATGTAACAATTTTGGTGA+AGG + chr6_2:66076536-66076555 Msa0924310:three_prime_UTR 30.0%
CTGATGAAGAAGAAAGGAAA+GGG - chr6_2:66070157-66070176 None:intergenic 35.0%
GATATGCTGATGAAGAAGAA+AGG - chr6_2:66070163-66070182 None:intergenic 35.0%
!! TTGCTCGGAATTGTTGATTT+AGG + chr6_2:66070451-66070470 Msa0924310:five_prime_UTR 35.0%
!! TGCTCGGAATTGTTGATTTA+GGG + chr6_2:66070452-66070471 Msa0924310:five_prime_UTR 35.0%
GATAACTGAGCCAATTTCAT+TGG + chr6_2:66070891-66070910 Msa0924310:CDS 35.0%
AAAGACTCGTGAACTTGAAA+AGG + chr6_2:66070939-66070958 Msa0924310:CDS 35.0%
CTATCTTAGAAATAGGGAGT+AGG + chr6_2:66071327-66071346 Msa0924310:intron 35.0%
TCTGACCCTAGAAACTATAT+CGG - chr6_2:66071371-66071390 None:intergenic 35.0%
!! AGTTTCTAGGGTCAGAAAAT+TGG + chr6_2:66071375-66071394 Msa0924310:intron 35.0%
! GTGTTGTTAATTGTGGATCA+TGG + chr6_2:66071455-66071474 Msa0924310:intron 35.0%
TGTGGATCATGGAAAATAGA+TGG + chr6_2:66071466-66071485 Msa0924310:intron 35.0%
CGGAAATGTTCAATGAAGAT+TGG - chr6_2:66071660-66071679 None:intergenic 35.0%
!!! TTTTCACTTTTGGCTCCTAT+CGG + chr6_2:66071869-66071888 Msa0924310:CDS 35.0%
GTACACAAACGAGAAAGATT+TGG - chr6_2:66071922-66071941 None:intergenic 35.0%
TGTACATACACTCTGTTGAA+AGG + chr6_2:66071937-66071956 Msa0924310:intron 35.0%
TGACGAATCACTATGAAACT+AGG + chr6_2:66071968-66071987 Msa0924310:intron 35.0%
! TTTTTCACTACGAATCTTGC+AGG + chr6_2:66072073-66072092 Msa0924310:intron 35.0%
GATATAGATACCCTTTGTGT+AGG + chr6_2:66072113-66072132 Msa0924310:CDS 35.0%
GCAACATTATCATACATCTC+TGG - chr6_2:66072153-66072172 None:intergenic 35.0%
TCATTTACATTGGGTTTAGG+AGG + chr6_2:66072234-66072253 Msa0924310:intron 35.0%
TTGGAAGCAGATACAAAGAA+AGG - chr6_2:66072486-66072505 None:intergenic 35.0%
! GCGTTTAGTTCCAAATATTC+AGG + chr6_2:66072804-66072823 Msa0924310:CDS 35.0%
AGTTCCAAATATTCAGGTGA+TGG + chr6_2:66072810-66072829 Msa0924310:intron 35.0%
! CATTGAGATTCATGAGGTTT+TGG + chr6_2:66072930-66072949 Msa0924310:CDS 35.0%
! CTTTTTGCCATATTATTCGC+AGG + chr6_2:66073080-66073099 Msa0924310:intron 35.0%
! TTTTCTGGGTGGTATAAATC+TGG + chr6_2:66073110-66073129 Msa0924310:CDS 35.0%
ATAAATCTGGCATTGCTTGT+TGG + chr6_2:66073123-66073142 Msa0924310:CDS 35.0%
! AACATATTAGGAAGTGCGTT+AGG - chr6_2:66073168-66073187 None:intergenic 35.0%
TAACGCACTTCCTAATATGT+TGG + chr6_2:66073167-66073186 Msa0924310:CDS 35.0%
AATCGAGACACCAACATATT+AGG - chr6_2:66073180-66073199 None:intergenic 35.0%
! ATGCTTTGTGCTATTGAAGA+AGG + chr6_2:66073240-66073259 Msa0924310:CDS 35.0%
GGATAAGCAGGAGTAATTAT+AGG - chr6_2:66073327-66073346 None:intergenic 35.0%
TTGTAAGTAGAGTTCATGCA+AGG - chr6_2:66073348-66073367 None:intergenic 35.0%
TTATGTCAGATGAGTTCAAG+AGG + chr6_2:66073391-66073410 Msa0924310:CDS 35.0%
TATGTCAGATGAGTTCAAGA+GGG + chr6_2:66073392-66073411 Msa0924310:CDS 35.0%
TTTGTGGTATTTGTAGGCTA+TGG + chr6_2:66073759-66073778 Msa0924310:intron 35.0%
CTGCTGTAATGTCTATTTGT+AGG - chr6_2:66073852-66073871 None:intergenic 35.0%
GTTATACCTTCAATGTCAAC+TGG - chr6_2:66073927-66073946 None:intergenic 35.0%
!! TTCCACCAGTGTTACTTTAT+GGG + chr6_2:66074198-66074217 Msa0924310:CDS 35.0%
ATACCAAGCTTCATATTTCC+TGG + chr6_2:66074369-66074388 Msa0924310:CDS 35.0%
TTCTCACCGTTTACTTTAGA+CGG - chr6_2:66074414-66074433 None:intergenic 35.0%
AGTCAATCTGAAAAGTCTCA+AGG + chr6_2:66074468-66074487 Msa0924310:CDS 35.0%
AAAGTCTCAAGGAAGTAAAG+CGG + chr6_2:66074479-66074498 Msa0924310:CDS 35.0%
CTTTCTCTTCCTTTCATCAT+CGG - chr6_2:66074517-66074536 None:intergenic 35.0%
TCTTCAGGAACATTCCTATT+GGG - chr6_2:66074597-66074616 None:intergenic 35.0%
ATCTTCAGGAACATTCCTAT+TGG - chr6_2:66074598-66074617 None:intergenic 35.0%
CAAGAACTAGTAGCACTAAA+AGG - chr6_2:66074627-66074646 None:intergenic 35.0%
!! GCATCAAGTTGTTTGTTATC+CGG - chr6_2:66074768-66074787 None:intergenic 35.0%
CTCTTCAAATCCAAATCTTG+CGG + chr6_2:66074962-66074981 Msa0924310:CDS 35.0%
TTCATTATCTAATGGAGGCT+TGG + chr6_2:66075031-66075050 Msa0924310:CDS 35.0%
! TTTGTCACTTAGGTTCTGTT+TGG + chr6_2:66075212-66075231 Msa0924310:intron 35.0%
TCTTGGATTAAGGGATTGAT+TGG - chr6_2:66075471-66075490 None:intergenic 35.0%
GTTTGTGTGTCTTGGATTAA+GGG - chr6_2:66075480-66075499 None:intergenic 35.0%
TGTTTGTGTGTCTTGGATTA+AGG - chr6_2:66075481-66075500 None:intergenic 35.0%
TATTGTCCATACCTGATAAG+AGG - chr6_2:66075770-66075789 None:intergenic 35.0%
GAAATTACAAGGGCTATTTG+AGG - chr6_2:66076015-66076034 None:intergenic 35.0%
AAACCTTGCCGAAATTACAA+GGG - chr6_2:66076025-66076044 None:intergenic 35.0%
AAGAATCCAAATTTAAGGGG+TGG + chr6_2:66076121-66076140 Msa0924310:intron 35.0%
CTCAAATAGCCTCTGTAATT+TGG - chr6_2:66076201-66076220 None:intergenic 35.0%
CAAATTACAGAGGCTATTTG+AGG + chr6_2:66076199-66076218 Msa0924310:CDS 35.0%
!!! TTGGTTGACTCCTTATTTTC+AGG + chr6_2:66076405-66076424 Msa0924310:intron 35.0%
GCTGATGAAGAAGAAAGGAA+AGG - chr6_2:66070158-66070177 None:intergenic 40.0%
TACTCTGATTTCCCATTCCA+GGG - chr6_2:66070852-66070871 None:intergenic 40.0%
TTACTCTGATTTCCCATTCC+AGG - chr6_2:66070853-66070872 None:intergenic 40.0%
GGAATGGGAAATCAGAGTAA+TGG + chr6_2:66070853-66070872 Msa0924310:CDS 40.0%
TTTGTCACATCTTCCTCAGT+TGG - chr6_2:66070922-66070941 None:intergenic 40.0%
CAATGTGTTAGTGTCGTGTT+TGG - chr6_2:66071032-66071051 None:intergenic 40.0%
ACAACTAAACAAGGTCAACC+TGG - chr6_2:66071287-66071306 None:intergenic 40.0%
TTTGGGTGAAAACCATTAGC+AGG + chr6_2:66071800-66071819 Msa0924310:CDS 40.0%
TTGGGTGAAAACCATTAGCA+GGG + chr6_2:66071801-66071820 Msa0924310:CDS 40.0%
GAAGGGATTCAATGAACAAC+TGG + chr6_2:66071825-66071844 Msa0924310:CDS 40.0%
ATTCAATGAACAACTGGTGC+AGG + chr6_2:66071831-66071850 Msa0924310:CDS 40.0%
GGAGCCAAAAGTGAAAATCT+TGG - chr6_2:66071866-66071885 None:intergenic 40.0%
ATGTCTAGGTCCTACACAAA+GGG - chr6_2:66072126-66072145 None:intergenic 40.0%
TGGGTTTAGGAGGATTTCTT+TGG + chr6_2:66072244-66072263 Msa0924310:intron 40.0%
ACAGAAGATGCTATCTGAGA+TGG + chr6_2:66072273-66072292 Msa0924310:CDS 40.0%
TGATCTCCTGTATGCAAGAT+TGG + chr6_2:66072372-66072391 Msa0924310:CDS 40.0%
ACAATGCCAATCTTGCATAC+AGG - chr6_2:66072381-66072400 None:intergenic 40.0%
TGTATGCAAGATTGGCATTG+TGG + chr6_2:66072380-66072399 Msa0924310:CDS 40.0%
GTATGCAAGATTGGCATTGT+GGG + chr6_2:66072381-66072400 Msa0924310:CDS 40.0%
TTCTTGTCCACACAACTCTT+TGG - chr6_2:66072505-66072524 None:intergenic 40.0%
GCAGGACTTAGATATATCAC+AGG + chr6_2:66072708-66072727 Msa0924310:intron 40.0%
GCACAACATTGAGATTCATG+AGG + chr6_2:66072924-66072943 Msa0924310:CDS 40.0%
TCAATAGCACAAAGCATGAC+TGG - chr6_2:66073237-66073256 None:intergenic 40.0%
GCTATTGAAGAAGGATCTCT+TGG + chr6_2:66073249-66073268 Msa0924310:CDS 40.0%
AGAAGGATCTCTTGGACTAT+CGG + chr6_2:66073257-66073276 Msa0924310:CDS 40.0%
!! ATCTCTTGGACTATCGGTTT+GGG + chr6_2:66073263-66073282 Msa0924310:CDS 40.0%
!! CTATCTCTGGGATTTCTTCT+AGG - chr6_2:66073291-66073310 None:intergenic 40.0%
ATGTCAGATGAGTTCAAGAG+GGG + chr6_2:66073393-66073412 Msa0924310:CDS 40.0%
CCAAACCTTATCTCAGTAAG+TGG - chr6_2:66073679-66073698 None:intergenic 40.0%
CCACTTACTGAGATAAGGTT+TGG + chr6_2:66073676-66073695 Msa0924310:intron 40.0%
ACCTTAGACAATGGAAAGGT+TGG + chr6_2:66073884-66073903 Msa0924310:CDS 40.0%
CCTTAGACAATGGAAAGGTT+GGG + chr6_2:66073885-66073904 Msa0924310:CDS 40.0%
ATACCTTCAATGTCAACTGG+CGG - chr6_2:66073924-66073943 None:intergenic 40.0%
TCTGAAAATTCGCCAGGATA+CGG - chr6_2:66074165-66074184 None:intergenic 40.0%
GATTTGTCTGAAAATTCGCC+AGG - chr6_2:66074171-66074190 None:intergenic 40.0%
CATAAAGTAACACTGGTGGA+AGG - chr6_2:66074199-66074218 None:intergenic 40.0%
!! CTTCCACCAGTGTTACTTTA+TGG + chr6_2:66074197-66074216 Msa0924310:CDS 40.0%
TTTACTTTAGACGGAACGGA+AGG - chr6_2:66074405-66074424 None:intergenic 40.0%
! TCCGTTCCGTCTAAAGTAAA+CGG + chr6_2:66074405-66074424 Msa0924310:CDS 40.0%
ACCGTTTACTTTAGACGGAA+CGG - chr6_2:66074409-66074428 None:intergenic 40.0%
AGTTCAAAATCAAGGGTTGC+TGG + chr6_2:66074441-66074460 Msa0924310:CDS 40.0%
AAGTCTCAAGGAAGTAAAGC+GGG + chr6_2:66074480-66074499 Msa0924310:CDS 40.0%
TGAAAGGAAGAGAAAGCGAT+TGG + chr6_2:66074521-66074540 Msa0924310:CDS 40.0%
!! TGACTCTGAAGTCAATAGCA+TGG + chr6_2:66074662-66074681 Msa0924310:CDS 40.0%
TTGGTTACACTTACACCAGA+AGG - chr6_2:66074735-66074754 None:intergenic 40.0%
TCTGGTGTAAGTGTAACCAA+TGG + chr6_2:66074735-66074754 Msa0924310:CDS 40.0%
AAAGCTTGATGCGCTTCATA+CGG - chr6_2:66074852-66074871 None:intergenic 40.0%
ATATCTCGTTGAAGCTCATC+AGG - chr6_2:66074885-66074904 None:intergenic 40.0%
TGATGAGCTTCAACGAGATA+TGG + chr6_2:66074884-66074903 Msa0924310:CDS 40.0%
GATGAGCTTCAACGAGATAT+GGG + chr6_2:66074885-66074904 Msa0924310:CDS 40.0%
ATGAGCTTCAACGAGATATG+GGG + chr6_2:66074886-66074905 Msa0924310:CDS 40.0%
AAATCCAAATCTTGCGGTAG+TGG + chr6_2:66074968-66074987 Msa0924310:CDS 40.0%
ATTATCTAATGGAGGCTTGG+AGG + chr6_2:66075034-66075053 Msa0924310:CDS 40.0%
ATGCAGTTGTTTGTGTGTCT+TGG - chr6_2:66075488-66075507 None:intergenic 40.0%
! GATCATCGCTCTAAATGTGA+AGG - chr6_2:66075538-66075557 None:intergenic 40.0%
!! TGACAGCACCATTGTTTTGT+GGG + chr6_2:66075717-66075736 Msa0924310:CDS 40.0%
AAGAAGCCTCTTATCAGGTA+TGG + chr6_2:66075761-66075780 Msa0924310:intron 40.0%
CAAACCTTGCCGAAATTACA+AGG - chr6_2:66076026-66076045 None:intergenic 40.0%
CAGATTCCACCCCTTAAATT+TGG - chr6_2:66076130-66076149 None:intergenic 40.0%
AATTTAAGGGGTGGAATCTG+TGG + chr6_2:66076130-66076149 Msa0924310:intron 40.0%
AGGTTGAACTTCACATCCTT+AGG + chr6_2:66076425-66076444 Msa0924310:intron 40.0%
GGTTGAACTTCACATCCTTA+GGG + chr6_2:66076426-66076445 Msa0924310:intron 40.0%
! TTTTTCCACTGCTTTCCCTA+AGG - chr6_2:66076444-66076463 None:intergenic 40.0%
!!! AGTTGATGGCTTTTTAGGAC+AGG - chr6_2:66076569-66076588 None:intergenic 40.0%
!! AATTTGTTGATGGGGATCCC+TGG + chr6_2:66070832-66070851 Msa0924310:exon 45.0%
ACTGAGCCAATTTCATTGGC+TGG + chr6_2:66070895-66070914 Msa0924310:CDS 45.0%
GTTGGTCCAGCCAATGAAAT+TGG - chr6_2:66070904-66070923 None:intergenic 45.0%
GCACAGACACTTCTTATCGA+AGG - chr6_2:66071138-66071157 None:intergenic 45.0%
CTGTGTGTTCAGTACTTGCA+AGG + chr6_2:66071198-66071217 Msa0924310:intron 45.0%
TGGATTGTATGAGAGTCAGC+AGG + chr6_2:66071224-66071243 Msa0924310:CDS 45.0%
ATTGTATGAGAGTCAGCAGG+AGG + chr6_2:66071227-66071246 Msa0924310:CDS 45.0%
TTCAAATTTCGCTGCGCTTC+AGG + chr6_2:66071578-66071597 Msa0924310:intron 45.0%
AAAACCATTAGCAGGGCGAA+GGG + chr6_2:66071808-66071827 Msa0924310:CDS 45.0%
CATGTCTAGGTCCTACACAA+AGG - chr6_2:66072127-66072146 None:intergenic 45.0%
ACATCTCTGGTTGCATGTCT+AGG - chr6_2:66072140-66072159 None:intergenic 45.0%
! GAAGATGCTATCTGAGATGG+AGG + chr6_2:66072276-66072295 Msa0924310:CDS 45.0%
TCTGCTTCCAAAGAGTTGTG+TGG + chr6_2:66072495-66072514 Msa0924310:intron 45.0%
ACATCCGTTGAGACTGAGAA+CGG - chr6_2:66072764-66072783 None:intergenic 45.0%
CCAGCAACCTGCGAATAATA+TGG - chr6_2:66073090-66073109 None:intergenic 45.0%
CCATATTATTCGCAGGTTGC+TGG + chr6_2:66073087-66073106 Msa0924310:intron 45.0%
GAAGTGCGTTAGGATAAAGC+TGG - chr6_2:66073158-66073177 None:intergenic 45.0%
GAGTATATACTCAGTGGCGA+TGG + chr6_2:66073205-66073224 Msa0924310:CDS 45.0%
GCACAAAGCATGACTGGATT+TGG - chr6_2:66073231-66073250 None:intergenic 45.0%
! GATCTCTTGGACTATCGGTT+TGG + chr6_2:66073262-66073281 Msa0924310:CDS 45.0%
GAGTTCATGCAAGGATAAGC+AGG - chr6_2:66073339-66073358 None:intergenic 45.0%
GAGGGGAACTGAAATATGTG+AGG + chr6_2:66073410-66073429 Msa0924310:CDS 45.0%
GTGGTATTTGTAGGCTATGG+AGG + chr6_2:66073762-66073781 Msa0924310:intron 45.0%
ATCCAGACGACCTTAGACAA+TGG + chr6_2:66073875-66073894 Msa0924310:CDS 45.0%
! TTCCATTGTCTAAGGTCGTC+TGG - chr6_2:66073880-66073899 None:intergenic 45.0%
GACGACCTTAGACAATGGAA+AGG + chr6_2:66073880-66073899 Msa0924310:CDS 45.0%
CCCAACCTTTCCATTGTCTA+AGG - chr6_2:66073888-66073907 None:intergenic 45.0%
GACCCATAAAGTAACACTGG+TGG - chr6_2:66074203-66074222 None:intergenic 45.0%
GCAGACCCATAAAGTAACAC+TGG - chr6_2:66074206-66074225 None:intergenic 45.0%
AACTGTTCACCTTCGCTTAC+TGG - chr6_2:66074246-66074265 None:intergenic 45.0%
ATGTAAACGCGTACACTGCA+TGG + chr6_2:66074301-66074320 Msa0924310:CDS 45.0%
CCAAGCTTCATATTTCCTGG+CGG + chr6_2:66074372-66074391 Msa0924310:CDS 45.0%
TACTTGGAGCCGATGATGAA+AGG + chr6_2:66074505-66074524 Msa0924310:CDS 45.0%
AAGGAAGAGAAAGCGATTGG+AGG + chr6_2:66074524-66074543 Msa0924310:CDS 45.0%
AGGAACATTCCTATTGGGAG+GGG - chr6_2:66074592-66074611 None:intergenic 45.0%
CAGGAACATTCCTATTGGGA+GGG - chr6_2:66074593-66074612 None:intergenic 45.0%
TCAGGAACATTCCTATTGGG+AGG - chr6_2:66074594-66074613 None:intergenic 45.0%
! CGAGAAACCCTGTCTGAAAT+CGG + chr6_2:66074698-66074717 Msa0924310:CDS 45.0%
! AAACCCTGTCTGAAATCGGT+TGG + chr6_2:66074702-66074721 Msa0924310:CDS 45.0%
! TCACCAACCGATTTCAGACA+GGG - chr6_2:66074708-66074727 None:intergenic 45.0%
ACCAGACATGATATGCTCGA+TGG - chr6_2:66074829-66074848 None:intergenic 45.0%
TCTTCCACTACCGCAAGATT+TGG - chr6_2:66074975-66074994 None:intergenic 45.0%
CACTTGTCTGAGAGAGCTTA+TGG - chr6_2:66075425-66075444 None:intergenic 45.0%
!! CTGACAGCACCATTGTTTTG+TGG + chr6_2:66075716-66075735 Msa0924310:CDS 45.0%
GCAGGAATCCCACAAAACAA+TGG - chr6_2:66075728-66075747 None:intergenic 45.0%
CTGATAAGAGGCTTCTTCTG+TGG - chr6_2:66075758-66075777 None:intergenic 45.0%
CACAGAAGAAGCCTCTTATC+AGG + chr6_2:66075756-66075775 Msa0924310:CDS 45.0%
TAGCCCTTGTAATTTCGGCA+AGG + chr6_2:66076019-66076038 Msa0924310:intron 45.0%
TGCGAGCGATGATATGGCTT+TGG - chr6_2:66070203-66070222 None:intergenic 50.0%
! AAAGGGTGCGAGCGATGATA+TGG - chr6_2:66070209-66070228 None:intergenic 50.0%
TCTGGGTCATCGTGATTGCT+CGG + chr6_2:66070436-66070455 Msa0924310:five_prime_UTR 50.0%
TTGATGGGGATCCCTGGAAT+GGG + chr6_2:66070838-66070857 Msa0924310:exon 50.0%
! TTCATTGGCTGGACCAACTG+AGG + chr6_2:66070906-66070925 Msa0924310:CDS 50.0%
GTCAGTGTCGTGTCATGTGT+CGG + chr6_2:66071100-66071119 Msa0924310:intron 50.0%
GTTCAGTACTTGCAAGGTGC+TGG + chr6_2:66071204-66071223 Msa0924310:intron 50.0%
GAAAACCATTAGCAGGGCGA+AGG + chr6_2:66071807-66071826 Msa0924310:CDS 50.0%
!!! ACTTTTGGCTCCTATCGGCT+AGG + chr6_2:66071874-66071893 Msa0924310:CDS 50.0%
!!! CTTTTGGCTCCTATCGGCTA+GGG + chr6_2:66071875-66071894 Msa0924310:CDS 50.0%
!!! TTTTGGCTCCTATCGGCTAG+GGG + chr6_2:66071876-66071895 Msa0924310:CDS 50.0%
CTACGAATCTTGCAGGTGCA+TGG + chr6_2:66072080-66072099 Msa0924310:intron 50.0%
! AGGGTATCTATATCCGCTCC+AGG - chr6_2:66072107-66072126 None:intergenic 50.0%
ATCACAGGGACATGAGCATC+AGG - chr6_2:66072325-66072344 None:intergenic 50.0%
CAGACCGTTCTCAGTCTCAA+CGG + chr6_2:66072757-66072776 Msa0924310:CDS 50.0%
!!! TTCGCAGGTTGCTGGTTTTC+TGG + chr6_2:66073095-66073114 Msa0924310:intron 50.0%
!!! TCGCAGGTTGCTGGTTTTCT+GGG + chr6_2:66073096-66073115 Msa0924310:intron 50.0%
TGGAGGCTAGCAAAGCTGAT+TGG + chr6_2:66073779-66073798 Msa0924310:CDS 50.0%
GGAGGCTAGCAAAGCTGATT+GGG + chr6_2:66073780-66073799 Msa0924310:CDS 50.0%
TCTCCGCCAGTTGACATTGA+AGG + chr6_2:66073918-66073937 Msa0924310:CDS 50.0%
CAAGGAGTTCCAGTAAGCGA+AGG + chr6_2:66074234-66074253 Msa0924310:CDS 50.0%
CACTGCATGGAAACCTGGAA+TGG + chr6_2:66074314-66074333 Msa0924310:CDS 50.0%
GACGTTTCACATGAGAGACG+CGG - chr6_2:66074344-66074363 None:intergenic 50.0%
CCGCCAGGAAATATGAAGCT+TGG - chr6_2:66074375-66074394 None:intergenic 50.0%
GGAAGTAAAGCGGGTGTACT+TGG + chr6_2:66074489-66074508 Msa0924310:CDS 50.0%
CATCTGTATCCCCTCCCAAT+AGG + chr6_2:66074580-66074599 Msa0924310:CDS 50.0%
! CTCACCAACCGATTTCAGAC+AGG - chr6_2:66074709-66074728 None:intergenic 50.0%
!! TCGGTTGGTGAGATTCCTTC+TGG + chr6_2:66074717-66074736 Msa0924310:CDS 50.0%
TGTAACCAATGGATCAGCGC+CGG + chr6_2:66074746-66074765 Msa0924310:CDS 50.0%
GCCATCGAGCATATCATGTC+TGG + chr6_2:66074825-66074844 Msa0924310:CDS 50.0%
TTCTTCTGTGGTACAGGAGC+AGG - chr6_2:66075746-66075765 None:intergenic 50.0%
AGAGGCTTCTTCTGTGGTAC+AGG - chr6_2:66075752-66075771 None:intergenic 50.0%
AGACCTCGCCCAAATTACAG+AGG + chr6_2:66076189-66076208 Msa0924310:CDS 50.0%
TAGCCTCTGTAATTTGGGCG+AGG - chr6_2:66076195-66076214 None:intergenic 50.0%
CACATCCTTAGGGAAAGCAG+TGG + chr6_2:66076436-66076455 Msa0924310:CDS 50.0%
! GTTGATGGGGATCCCTGGAA+TGG + chr6_2:66070837-66070856 Msa0924310:exon 55.0%
! TCAGCAGGAGGCAGTTGGTA+GGG + chr6_2:66071239-66071258 Msa0924310:CDS 55.0%
GAATCCCTTCGCCCTGCTAA+TGG - chr6_2:66071815-66071834 None:intergenic 55.0%
ATCTTGCAGGTGCATGGTCC+TGG + chr6_2:66072086-66072105 Msa0924310:intron 55.0%
GGACATGAGCATCAGGCACA+GGG - chr6_2:66072318-66072337 None:intergenic 55.0%
!!! AGGTTTTGGGCAAAGCGTCG+TGG + chr6_2:66072944-66072963 Msa0924310:CDS 55.0%
!!! CAGGTTGCTGGTTTTCTGGG+TGG + chr6_2:66073099-66073118 Msa0924310:intron 55.0%
ATGGGTCTGCAGCGTAAGCA+AGG + chr6_2:66074216-66074235 Msa0924310:CDS 55.0%
GCGTACACTGCATGGAAACC+TGG + chr6_2:66074309-66074328 Msa0924310:CDS 55.0%
!! GTTATCCGGCGCTGATCCAT+TGG - chr6_2:66074754-66074773 None:intergenic 55.0%
!! AATGGTGCTGTCAGCTCAGC+AGG - chr6_2:66075710-66075729 None:intergenic 55.0%
GAGAGTCAGCAGGAGGCAGT+TGG + chr6_2:66071234-66071253 Msa0924310:CDS 60.0%
GTCAGCAGGAGGCAGTTGGT+AGG + chr6_2:66071238-66071257 Msa0924310:CDS 60.0%
!! GTTGGTAGGGAGGAGGTGCT+TGG + chr6_2:66071252-66071271 Msa0924310:CDS 60.0%
! GCTCCTATCGGCTAGGGGTA+CGG + chr6_2:66071881-66071900 Msa0924310:intron 60.0%
GGGACATGAGCATCAGGCAC+AGG - chr6_2:66072319-66072338 None:intergenic 60.0%
GAGACGCGGATGTCCATTCC+AGG - chr6_2:66074330-66074349 None:intergenic 60.0%
GGGAGGGGATACAGATGCAG+AGG - chr6_2:66074577-66074596 None:intergenic 60.0%
TGGAGGCTTGGAGGAGCTTG+AGG + chr6_2:66075043-66075062 Msa0924310:CDS 60.0%
!! GCAGGAGGCAGTTGGTAGGG+AGG + chr6_2:66071242-66071261 Msa0924310:CDS 65.0%
!! GGAGGCAGTTGGTAGGGAGG+AGG + chr6_2:66071245-66071264 Msa0924310:CDS 65.0%
!! GGAGGAGGTGCTTGGCAGAC+TGG + chr6_2:66071260-66071279 Msa0924310:CDS 65.0%
GGTGCTTGGCAGACTGGACC+AGG + chr6_2:66071266-66071285 Msa0924310:CDS 65.0%
GCTCCGTACCCCTAGCCGAT+AGG - chr6_2:66071887-66071906 None:intergenic 65.0%
GCAGGTGCATGGTCCTGGAG+CGG + chr6_2:66072091-66072110 Msa0924310:intron 65.0%
ACGGAAGGTCGAACGCCGCC+AGG - chr6_2:66074390-66074409 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 66070152 66076675 66070152 ID=Msa0924310;Name=Msa0924310
chr6_2 mRNA 66070152 66076675 66070152 ID=Msa0924310-mRNA-1;Parent=Msa0924310;Name=Msa0924310-mRNA-1;_AED=0.11;_eAED=0.11;_QI=579|0.84|0.92|0.92|0.92|0.85|14|186|772
chr6_2 exon 66070152 66070240 66070152 ID=Msa0924310-mRNA-1:exon:10428;Parent=Msa0924310-mRNA-1
chr6_2 exon 66070351 66070960 66070351 ID=Msa0924310-mRNA-1:exon:10429;Parent=Msa0924310-mRNA-1
chr6_2 exon 66071210 66071287 66071210 ID=Msa0924310-mRNA-1:exon:10430;Parent=Msa0924310-mRNA-1
chr6_2 exon 66071790 66071897 66071790 ID=Msa0924310-mRNA-1:exon:10431;Parent=Msa0924310-mRNA-1
chr6_2 exon 66072095 66072157 66072095 ID=Msa0924310-mRNA-1:exon:10432;Parent=Msa0924310-mRNA-1
chr6_2 exon 66072253 66072414 66072253 ID=Msa0924310-mRNA-1:exon:10433;Parent=Msa0924310-mRNA-1
chr6_2 exon 66072712 66072825 66072712 ID=Msa0924310-mRNA-1:exon:10434;Parent=Msa0924310-mRNA-1
chr6_2 exon 66072917 66072979 66072917 ID=Msa0924310-mRNA-1:exon:10435;Parent=Msa0924310-mRNA-1
chr6_2 exon 66073102 66073431 66073102 ID=Msa0924310-mRNA-1:exon:10436;Parent=Msa0924310-mRNA-1
chr6_2 exon 66073775 66073939 66073775 ID=Msa0924310-mRNA-1:exon:10437;Parent=Msa0924310-mRNA-1
chr6_2 exon 66074126 66075064 66074126 ID=Msa0924310-mRNA-1:exon:10438;Parent=Msa0924310-mRNA-1
chr6_2 exon 66075707 66075777 66075707 ID=Msa0924310-mRNA-1:exon:10439;Parent=Msa0924310-mRNA-1
chr6_2 exon 66076178 66076220 66076178 ID=Msa0924310-mRNA-1:exon:10440;Parent=Msa0924310-mRNA-1
chr6_2 exon 66076427 66076675 66076427 ID=Msa0924310-mRNA-1:exon:10441;Parent=Msa0924310-mRNA-1
chr6_2 five_prime_UTR 66070152 66070240 66070152 ID=Msa0924310-mRNA-1:five_prime_utr;Parent=Msa0924310-mRNA-1
chr6_2 five_prime_UTR 66070351 66070840 66070351 ID=Msa0924310-mRNA-1:five_prime_utr;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66070841 66070960 66070841 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66071210 66071287 66071210 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66071790 66071897 66071790 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66072095 66072157 66072095 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66072253 66072414 66072253 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66072712 66072825 66072712 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66072917 66072979 66072917 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66073102 66073431 66073102 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66073775 66073939 66073775 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66074126 66075064 66074126 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66075707 66075777 66075707 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66076178 66076220 66076178 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 CDS 66076427 66076489 66076427 ID=Msa0924310-mRNA-1:cds;Parent=Msa0924310-mRNA-1
chr6_2 three_prime_UTR 66076490 66076675 66076490 ID=Msa0924310-mRNA-1:three_prime_utr;Parent=Msa0924310-mRNA-1
Gene Sequence

>Msa0924310

ATGGGGATCCCTGGAATGGGAAATCAGAGTAATGGAAAACAATGGTTAGGGATAACTGAGCCAATTTCATTGGCTGGACCAACTGAGGAAGATGTGACAAAGACTCGTGAACTTGAAAAGTACTTGCAAGGTGCTGGATTGTATGAGAGTCAGCAGGAGGCAGTTGGTAGGGAGGAGGTGCTTGGCAGACTGGACCAGATTGTGAAGATTTGGGTGAAAACCATTAGCAGGGCGAAGGGATTCAATGAACAACTGGTGCAGGAAGCAAATGCCAAGATTTTCACTTTTGGCTCCTATCGGCTAGGGGTGCATGGTCCTGGAGCGGATATAGATACCCTTTGTGTAGGACCTAGACATGCAACCAGAGATGAGGATTTCTTTGGTGAGCTACAGAAGATGCTATCTGAGATGGAGGAAGTAACTGAATTGCACCCTGTGCCTGATGCTCATGTCCCTGTGATGAAATTCAAGTTTAATGGAGTTTCTGTTGATCTCCTGTATGCAAGATTGGCATTGTGGGTTATTCCCGAAGACTTAGATATATCACAGGAATCAATATTACAAAATGTAGATGAACAGACCGTTCTCAGTCTCAACGGATGTAGAGTAACTGATCAAGTCTTGCGTTTAGTTCCAAATATTCAGAATTTTCGCACAACATTGAGATTCATGAGGTTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTGCTGGTTTTCTGGGTGGTATAAATCTGGCATTGCTTGTTGGTCGAATATGCCAGCTTTATCCTAACGCACTTCCTAATATGTTGGTGTCTCGATTCTTTAGAGTATATACTCAGTGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTATCGGTTTGGGATCCTAGAAGAAATCCCAGAGATAGATATCATCTAATGCCTATAATTACTCCTGCTTATCCTTGCATGAACTCTACTTACAATGTGACAACAAGTACACTGCGTATTATGTCAGATGAGTTCAAGAGGGGAACTGAAATATGTGAGGCTATGGAGGCTAGCAAAGCTGATTGGGATACTCTTTTTGAGCCGTACCCATTTTTTGAAGCTTACAAGAATTACCTACAAATAGACATTACAGCAGAGAATCCAGACGACCTTAGACAATGGAAAGGTTGGGTTGAGTCTCGTCTCCGCCAGTTGACATTGAAGATTGAGAAGTACACTTATGGTATGCTTCAGTGTCATCCGTATCCTGGCGAATTTTCAGACAAATCTAGATCCTTCCACCAGTGTTACTTTATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTAAGCGAAGGTGAACAGTTTGATATAAGGCAAACCGTAGAAGAATTCAAGCATAATGTAAACGCGTACACTGCATGGAAACCTGGAATGGACATCCGCGTCTCTCATGTGAAACGTCGTAACATACCAAGCTTCATATTTCCTGGCGGCGTTCGACCTTCCGTTCCGTCTAAAGTAAACGGTGAGAATAGACGAAGTTCAAAATCAAGGGTTGCTGGTCAAAGTCAATCTGAAAAGTCTCAAGGAAGTAAAGCGGGTGTACTTGGAGCCGATGATGAAAGGAAGAGAAAGCGATTGGAGGATAATAATAACTCAAGGGTTTCAAAGTCCTCTGCATCTGTATCCCCTCCCAATAGGAATGTTCCTGAAGATAGAAATCCTTTTAGTGCTACTAGTTCTTGTTCTATGAAATTTGATGACTCTGAAGTCAATAGCATGGATGATCAAAAGATCGAGAAACCCTGTCTGAAATCGGTTGGTGAGATTCCTTCTGGTGTAAGTGTAACCAATGGATCAGCGCCGGATAACAAACAACTTGATGCTCCTGATACATCTAACACTAAAGAAGAAGAACGAATAGCCATCGAGCATATCATGTCTGGTCCGTATGAAGCGCATCAAGCTTTGACAGAAGAACCTGATGAGCTTCAACGAGATATGGGGTATAGAAATCAAGTCAATGATAATGGTGGAAGTGTGAAAAGCAACAACTTTGACTCTTCAAATCCAAATCTTGCGGTAGTGGAAGATCAAGTTATTTCTAAGGAGACAGTATGTTCAACTCATTCATTATCTAATGGAGGCTTGGAGGAGCTTGAGCCTGCTGAGCTGACAGCACCATTGTTTTGTGGGATTCCTGCTCCTGTACCACAGAAGAAGCCTCTTATCAGAAGCTATTTTCAGACCTCGCCCAAATTACAGAGGCTATTTGAGGTTGAACTTCACATCCTTAGGGAAAGCAGTGGAAAAAAGCACTTAAGAGACTTCAAAGCTTAA
Protein sequence

>Msa0924310

MGIPGMGNQSNGKQWLGITEPISLAGPTEEDVTKTRELEKYLQGAGLYESQQEAVGREEVLGRLDQIVKIWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPSFIFPGGVRPSVPSKVNGENRRSSKSRVAGQSQSEKSQGSKAGVLGADDERKRKRLEDNNNSRVSKSSASVSPPNRNVPEDRNPFSATSSCSMKFDDSEVNSMDDQKIEKPCLKSVGEIPSGVSVTNGSAPDNKQLDAPDTSNTKEEERIAIEHIMSGPYEAHQALTEEPDELQRDMGYRNQVNDNGGSVKSNNFDSSNPNLAVVEDQVISKETVCSTHSLSNGGLEELEPAELTAPLFCGIPAPVPQKKPLIRSYFQTSPKLQRLFEVELHILRESSGKKHLRDFKA*