AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1421990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421990 MtrunA17_Chr6g0483461 96.770 743 24 0 1 743 1 743 0.0 1499
Msa1421990 MtrunA17_Chr8g0392531 72.630 749 195 6 1 743 1 745 0.0 1111
Msa1421990 MtrunA17_Chr8g0340751 66.132 499 165 3 13 508 24 521 0.0 722
Msa1421990 MtrunA17_Chr3g0140561 66.667 486 160 2 18 501 26 511 0.0 721
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421990 AT1G17980.1 77.535 503 111 2 9 511 5 505 0.0 838
Msa1421990 AT4G32850.1 55.821 627 254 6 11 614 16 642 0.0 711
Msa1421990 AT4G32850.9 55.821 627 254 6 11 614 16 642 0.0 711
Msa1421990 AT4G32850.5 55.821 627 254 6 11 614 16 642 0.0 711
Msa1421990 AT4G32850.3 55.821 627 254 6 11 614 16 642 0.0 711
Msa1421990 AT4G32850.8 55.821 627 254 6 11 614 16 642 0.0 711
Msa1421990 AT4G32850.10 55.821 627 254 6 11 614 16 642 0.0 711
Msa1421990 AT4G32850.6 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.2 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.13 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.15 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.16 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.4 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.7 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.17 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.14 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.12 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT4G32850.11 55.821 627 254 6 11 614 16 642 0.0 710
Msa1421990 AT2G25850.4 61.581 544 191 5 17 556 24 553 0.0 708
Msa1421990 AT2G25850.1 61.581 544 191 5 17 556 24 553 0.0 707
Msa1421990 AT2G25850.6 61.581 544 191 5 17 556 24 553 0.0 707
Msa1421990 AT2G25850.7 61.581 544 191 5 17 556 24 553 0.0 707
Msa1421990 AT2G25850.8 61.581 544 191 5 17 556 24 553 0.0 707
Msa1421990 AT2G25850.2 61.581 544 191 5 17 556 24 553 0.0 707
Msa1421990 AT2G25850.3 61.581 544 191 5 17 556 24 553 0.0 707
Msa1421990 AT2G25850.5 61.581 544 191 5 17 556 24 553 0.0 707
Msa1421990 AT2G25850.9 61.581 544 191 5 17 556 24 553 0.0 706
Msa1421990 AT1G17980.2 77.309 379 85 1 133 511 1 378 0.0 638
Msa1421990 AT3G06560.1 35.307 456 274 6 30 484 13 448 3.39e-84 277

Find 219 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAATAGCCTCTGTAATT+TGG 0.082080 tig0025333:+29717 None:intergenic
ATAACCATCACCTGAATATT+TGG 0.135587 tig0025333:+33101 None:intergenic
CTTCCACCAGTGTTACTTTA+TGG 0.158827 tig0025333:-31718 Msa1421990:CDS
CATTGAGATTCATGAGGTTT+TGG 0.192538 tig0025333:-32985 Msa1421990:CDS
GTGATGAAATTCAAGTTTAA+TGG 0.194102 tig0025333:-33575 Msa1421990:CDS
AATAGTACAAAACTTCAAAT+TGG 0.207341 tig0025333:+35423 None:intergenic
TTGCTCGGAATTGTTGATTT+AGG 0.221936 tig0025333:-35464 Msa1421990:five_prime_UTR
AACTGTTCACCTTCGCTTAC+TGG 0.225983 tig0025333:+31672 None:intergenic
CTATCTCTGGGATTTCTTCT+AGG 0.236839 tig0025333:+32627 None:intergenic
GATTACAGAGAAGAAGAAAA+AGG 0.267165 tig0025333:+35691 None:intergenic
GCGTTTAGTTCCAAATATTC+AGG 0.278540 tig0025333:-33111 Msa1421990:intron
TGCTCGGAATTGTTGATTTA+GGG 0.279422 tig0025333:-35463 Msa1421990:five_prime_UTR
TCTTTAGTGTTAGATGTATC+AGG 0.279655 tig0025333:+31126 None:intergenic
GTTGGTCCAGCCAATGAAAT+TGG 0.293988 tig0025333:+35014 None:intergenic
TTCCACCAGTGTTACTTTAT+GGG 0.301657 tig0025333:-31717 Msa1421990:CDS
CTGCTGTAATGTCTATTTGT+AGG 0.303060 tig0025333:+32066 None:intergenic
AATCGAGACACCAACATATT+AGG 0.313637 tig0025333:+32738 None:intergenic
AAAATTGTTACATAGATAAA+AGG 0.319123 tig0025333:+29387 None:intergenic
TCTTCCACTACCGCAAGATT+TGG 0.320954 tig0025333:+30943 None:intergenic
TGATGAGCTTCAACGAGATA+TGG 0.322014 tig0025333:-31031 Msa1421990:CDS
TGAATCAGATTGTGAAGATT+TGG 0.322730 tig0025333:-34133 Msa1421990:intron
TTACTCTGATTTCCCATTCC+AGG 0.330048 tig0025333:+35065 None:intergenic
ATCTTCAGGAACATTCCTAT+TGG 0.331850 tig0025333:+31320 None:intergenic
ATAGTACAAAACTTCAAATT+GGG 0.337639 tig0025333:+35424 None:intergenic
TGGGTTTAGGAGGATTTCTT+TGG 0.339547 tig0025333:-33671 Msa1421990:intron
CAAGAACTAGTAGCACTAAA+AGG 0.342762 tig0025333:+31291 None:intergenic
CCCAACCTTTCCATTGTCTA+AGG 0.343802 tig0025333:+32030 None:intergenic
GCACAAAGCATGACTGGATT+TGG 0.345010 tig0025333:+32687 None:intergenic
TCAACTCATTCATTATCTAA+TGG 0.345747 tig0025333:-30892 Msa1421990:CDS
AAAATTTATTAATTTGTTGA+TGG 0.348372 tig0025333:-35093 Msa1421990:exon
GGAAGATCAAGTTATTTCTA+AGG 0.348675 tig0025333:-30926 Msa1421990:CDS
CCATATTATTCGCAGGTTGC+TGG 0.356851 tig0025333:-32828 Msa1421990:intron
AGGTTGAACTTCACATCCTT+AGG 0.362242 tig0025333:-29490 Msa1421990:CDS
AGTAATGGAAAACAATGGTT+AGG 0.363093 tig0025333:-35047 Msa1421990:CDS
ATACCAAGCTTCATATTTCC+TGG 0.368990 tig0025333:-31546 Msa1421990:CDS
CTAAAAGGATTTCTATCTTC+AGG 0.371322 tig0025333:+31306 None:intergenic
GAATCCCTTCGCCCTGCTAA+TGG 0.373468 tig0025333:+34103 None:intergenic
GGAAGTAAAGCGGGTGTACT+TGG 0.373550 tig0025333:-31426 Msa1421990:CDS
TAGATTGAGAAGTACACTTA+TGG 0.374942 tig0025333:-31792 Msa1421990:CDS
TCAAATAGCCTCTGTAATTT+GGG 0.376369 tig0025333:+29718 None:intergenic
TTCCATTGTCTAAGGTCGTC+TGG 0.377225 tig0025333:+32038 None:intergenic
TCTTCAGGAACATTCCTATT+GGG 0.377495 tig0025333:+31321 None:intergenic
AAAGGGTGCGAGCGATGATA+TGG 0.378794 tig0025333:+35709 None:intergenic
TCGGTTGGTGAGATTCCTTC+TGG 0.381490 tig0025333:-31198 Msa1421990:CDS
GGATAAGCAGGAGTAATTAT+AGG 0.382631 tig0025333:+32591 None:intergenic
ATCTCTTGGACTATCGGTTT+GGG 0.383690 tig0025333:-32652 Msa1421990:CDS
CTTTCTCTTCCTTTCATCAT+CGG 0.398080 tig0025333:+31401 None:intergenic
AATGGTGCTGTCAGCTCAGC+AGG 0.401653 tig0025333:+30208 None:intergenic
GATCTCTTGGACTATCGGTT+TGG 0.403460 tig0025333:-32653 Msa1421990:CDS
GATAACTGAGCCAATTTCAT+TGG 0.408497 tig0025333:-35024 Msa1421990:CDS
AAAAGTTCGATAAAAGTTGA+TGG 0.411168 tig0025333:+29335 None:intergenic
TCAAGAATTCATCAAGTTGA+AGG 0.413467 tig0025333:-35542 Msa1421990:five_prime_UTR
CATTAGATGATATCTATCTC+TGG 0.413765 tig0025333:+32614 None:intergenic
GCATCAAGTTGTTTGTTATC+CGG 0.416100 tig0025333:+31150 None:intergenic
ATCTTGCAGGTGCATGGTCC+TGG 0.416913 tig0025333:-33829 Msa1421990:intron
CACAGAAGAAGCCTCTTATC+AGG 0.419182 tig0025333:-30159 Msa1421990:intron
GTTCAGTACTTGCAAGGTGC+TGG 0.419977 tig0025333:-34711 Msa1421990:intron
TTCTCACCGTTTACTTTAGA+CGG 0.421644 tig0025333:+31504 None:intergenic
GGAGGCTAGCAAAGCTGATT+GGG 0.423680 tig0025333:-32135 Msa1421990:CDS
TGGAGGCTAGCAAAGCTGAT+TGG 0.425422 tig0025333:-32136 Msa1421990:CDS
AAATTTATTAATTTGTTGAT+GGG 0.434523 tig0025333:-35092 Msa1421990:exon
GGAGGAGGTGCTTGGCAGAC+TGG 0.436908 tig0025333:-34655 Msa1421990:CDS
GTTGGTAGGGAGGAGGTGCT+TGG 0.437236 tig0025333:-34663 Msa1421990:CDS
AGAAATCAAGTCAATGATAA+TGG 0.438511 tig0025333:-31003 Msa1421990:CDS
AAATCCAAATCTTGCGGTAG+TGG 0.439944 tig0025333:-30947 Msa1421990:CDS
GATGAGCTTCAACGAGATAT+GGG 0.441070 tig0025333:-31030 Msa1421990:CDS
GCTATTGAAGAAGGATCTCT+TGG 0.442160 tig0025333:-32666 Msa1421990:CDS
ACCTTAGACAATGGAAAGGT+TGG 0.442976 tig0025333:-32031 Msa1421990:CDS
CGAGAAACCCTGTCTGAAAT+CGG 0.444510 tig0025333:-31217 Msa1421990:CDS
GAATCAGATTGTGAAGATTT+GGG 0.444681 tig0025333:-34132 Msa1421990:intron
TTCATTATCTAATGGAGGCT+TGG 0.445655 tig0025333:-30884 Msa1421990:CDS
TGATCTCCTGTATGCAAGAT+TGG 0.446198 tig0025333:-33543 Msa1421990:CDS
GAGACGCGGATGTCCATTCC+AGG 0.447283 tig0025333:+31588 None:intergenic
TGCGAGCGATGATATGGCTT+TGG 0.451794 tig0025333:+35715 None:intergenic
ACATCTCTGGTTGCATGTCT+AGG 0.454924 tig0025333:+33778 None:intergenic
TTTGTCACATCTTCCTCAGT+TGG 0.455777 tig0025333:+34996 None:intergenic
TCTCCGCCAGTTGACATTGA+AGG 0.456885 tig0025333:-31997 Msa1421990:intron
ATATCTCGTTGAAGCTCATC+AGG 0.457387 tig0025333:+31033 None:intergenic
CATCTGTATCCCCTCCCAAT+AGG 0.457617 tig0025333:-31335 Msa1421990:CDS
GAAGGGATTCAATGAACAAC+TGG 0.460454 tig0025333:-34090 Msa1421990:CDS
CTTCAGTGTCATCCGTATCC+TGG 0.464191 tig0025333:-31765 Msa1421990:CDS
GTTATCCGGCGCTGATCCAT+TGG 0.464992 tig0025333:+31164 None:intergenic
TCAATAGCACAAAGCATGAC+TGG 0.467641 tig0025333:+32681 None:intergenic
GGTTGAACTTCACATCCTTA+GGG 0.468725 tig0025333:-29489 Msa1421990:CDS
TTCTTCTGTGGTACAGGAGC+AGG 0.468957 tig0025333:+30172 None:intergenic
ACTGAGCCAATTTCATTGGC+TGG 0.469138 tig0025333:-35020 Msa1421990:CDS
GTCAGCAGGAGGCAGTTGGT+AGG 0.469915 tig0025333:-34677 Msa1421990:CDS
ACGGAAGGTCGAACGCCGCC+AGG 0.470088 tig0025333:+31528 None:intergenic
TATTGTCCATACCTGATAAG+AGG 0.470151 tig0025333:+30148 None:intergenic
GAGTTCATGCAAGGATAAGC+AGG 0.471704 tig0025333:+32579 None:intergenic
CTGATGAAGAAGAAAGGAAA+GGG 0.472712 tig0025333:+35761 None:intergenic
ATGCTTTGTGCTATTGAAGA+AGG 0.478933 tig0025333:-32675 Msa1421990:CDS
TCTGAAAATTCGCCAGGATA+CGG 0.480072 tig0025333:+31753 None:intergenic
TTTGGGTGAAAACCATTAGC+AGG 0.480623 tig0025333:-34115 Msa1421990:CDS
ATAGACGAAGTTCAAAATCA+AGG 0.482214 tig0025333:-31482 Msa1421990:CDS
GTTATACCTTCAATGTCAAC+TGG 0.483288 tig0025333:+31991 None:intergenic
ATTATGCTTGAATTCTTCTA+CGG 0.483355 tig0025333:+31635 None:intergenic
AAAGACTCGTGAACTTGAAA+AGG 0.483518 tig0025333:-34976 Msa1421990:intron
AGTTCAAAATCAAGGGTTGC+TGG 0.483650 tig0025333:-31474 Msa1421990:CDS
ATAAATCTGGCATTGCTTGT+TGG 0.485761 tig0025333:-32792 Msa1421990:CDS
GAATTGTTGATTTAGGGTTA+CGG 0.485828 tig0025333:-35457 Msa1421990:five_prime_UTR
AAGGTGAACAGTTTGATATA+AGG 0.486017 tig0025333:-31662 Msa1421990:CDS
TCCGTTCCGTCTAAAGTAAA+CGG 0.488834 tig0025333:-31510 Msa1421990:CDS
AGAAGGATCTCTTGGACTAT+CGG 0.489165 tig0025333:-32658 Msa1421990:CDS
ATTATCTAATGGAGGCTTGG+AGG 0.489261 tig0025333:-30881 Msa1421990:CDS
AGAGGCTTCTTCTGTGGTAC+AGG 0.492107 tig0025333:+30166 None:intergenic
GCGTACACTGCATGGAAACC+TGG 0.492579 tig0025333:-31606 Msa1421990:CDS
GCCATCGAGCATATCATGTC+TGG 0.493767 tig0025333:-31090 Msa1421990:CDS
TACTCTGATTTCCCATTCCA+GGG 0.497352 tig0025333:+35066 None:intergenic
TTGATGGGGATCCCTGGAAT+GGG 0.498382 tig0025333:-35077 Msa1421990:CDS
AATTTGTTGATGGGGATCCC+TGG 0.499052 tig0025333:-35083 Msa1421990:exon
CAAATTACAGAGGCTATTTG+AGG 0.499781 tig0025333:-29716 Msa1421990:intron
GGAGGCAGTTGGTAGGGAGG+AGG 0.500492 tig0025333:-34670 Msa1421990:CDS
ATCACAGGGACATGAGCATC+AGG 0.501815 tig0025333:+33593 None:intergenic
GTAATGGAAAACAATGGTTA+GGG 0.502287 tig0025333:-35046 Msa1421990:CDS
GCAACATTATCATACATCTC+TGG 0.504699 tig0025333:+33765 None:intergenic
GGAGCCAAAAGTGAAAATCT+TGG 0.506962 tig0025333:+34052 None:intergenic
GTTGATGGGGATCCCTGGAA+TGG 0.507469 tig0025333:-35078 Msa1421990:exon
CTCACCAACCGATTTCAGAC+AGG 0.507788 tig0025333:+31209 None:intergenic
GATTTGTCTGAAAATTCGCC+AGG 0.508754 tig0025333:+31747 None:intergenic
CCTTAGACAATGGAAAGGTT+GGG 0.509451 tig0025333:-32030 Msa1421990:CDS
AAGGAAGAGAAAGCGATTGG+AGG 0.509694 tig0025333:-31391 Msa1421990:CDS
GGGACATGAGCATCAGGCAC+AGG 0.513982 tig0025333:+33599 None:intergenic
GTGGTATTTGTAGGCTATGG+AGG 0.514598 tig0025333:-32153 Msa1421990:intron
TTTCACAAATTCATTCATCT+GGG 0.515789 tig0025333:-35496 Msa1421990:five_prime_UTR
GTATGCAAGATTGGCATTGT+GGG 0.518685 tig0025333:-33534 Msa1421990:CDS
TGAAAGGAAGAGAAAGCGAT+TGG 0.520091 tig0025333:-31394 Msa1421990:CDS
TCAGCAGGAGGCAGTTGGTA+GGG 0.520612 tig0025333:-34676 Msa1421990:CDS
ATTCAATGAACAACTGGTGC+AGG 0.523694 tig0025333:-34084 Msa1421990:CDS
TGGAGGCTTGGAGGAGCTTG+AGG 0.528787 tig0025333:-30872 Msa1421990:intron
GATATGCTGATGAAGAAGAA+AGG 0.532179 tig0025333:+35755 None:intergenic
ATGTAAACGCGTACACTGCA+TGG 0.533054 tig0025333:-31614 Msa1421990:CDS
TGTATGCAAGATTGGCATTG+TGG 0.533196 tig0025333:-33535 Msa1421990:CDS
TACTTGGAGCCGATGATGAA+AGG 0.536484 tig0025333:-31410 Msa1421990:CDS
AAAGCTTGATGCGCTTCATA+CGG 0.537157 tig0025333:+31066 None:intergenic
AATTTATTAATTTGTTGATG+GGG 0.538040 tig0025333:-35091 Msa1421990:exon
GCAGGAGGCAGTTGGTAGGG+AGG 0.538560 tig0025333:-34673 Msa1421990:CDS
GGTGCTTGGCAGACTGGACC+AGG 0.538851 tig0025333:-34649 Msa1421990:intron
ATTAGATGATATCTATCTCT+GGG 0.544096 tig0025333:+32615 None:intergenic
TGGAGGATAATAATAACTCA+AGG 0.545041 tig0025333:-31374 Msa1421990:CDS
TAGACGAAGTTCAAAATCAA+GGG 0.546567 tig0025333:-31481 Msa1421990:CDS
GGAATGGGAAATCAGAGTAA+TGG 0.546702 tig0025333:-35062 Msa1421990:CDS
ACTCATTCATTATCTAATGG+AGG 0.549926 tig0025333:-30889 Msa1421990:CDS
TCTGGGTCATCGTGATTGCT+CGG 0.550403 tig0025333:-35479 Msa1421990:five_prime_UTR
CAGGAACATTCCTATTGGGA+GGG 0.552467 tig0025333:+31325 None:intergenic
ACAGAAGATGCTATCTGAGA+TGG 0.554931 tig0025333:-33642 Msa1421990:CDS
TGAGAATATATATGTTTCAC+CGG 0.556670 tig0025333:-29302 Msa1421990:three_prime_UTR
AGGGTATCTATATCCGCTCC+AGG 0.558973 tig0025333:+33811 None:intergenic
GAGTATATACTCAGTGGCGA+TGG 0.559198 tig0025333:-32710 Msa1421990:CDS
GAAAACCATTAGCAGGGCGA+AGG 0.559917 tig0025333:-34108 Msa1421990:CDS
TTAAACTTGAATTTCATCAC+AGG 0.560441 tig0025333:+33578 None:intergenic
CCGCCAGGAAATATGAAGCT+TGG 0.561384 tig0025333:+31543 None:intergenic
AAGTCTCAAGGAAGTAAAGC+GGG 0.561568 tig0025333:-31435 Msa1421990:CDS
GAGAGTCAGCAGGAGGCAGT+TGG 0.561773 tig0025333:-34681 Msa1421990:CDS
AACATATTAGGAAGTGCGTT+AGG 0.562376 tig0025333:+32750 None:intergenic
ATGGGTCTGCAGCGTAAGCA+AGG 0.566647 tig0025333:-31699 Msa1421990:CDS
ACAATGCCAATCTTGCATAC+AGG 0.568625 tig0025333:+33537 None:intergenic
ATCCAGACGACCTTAGACAA+TGG 0.568936 tig0025333:-32040 Msa1421990:CDS
CACTGCATGGAAACCTGGAA+TGG 0.570143 tig0025333:-31601 Msa1421990:CDS
GATATAGATACCCTTTGTGT+AGG 0.571052 tig0025333:-33802 Msa1421990:CDS
CTCTTCAAATCCAAATCTTG+CGG 0.571460 tig0025333:-30953 Msa1421990:CDS
CTACGAATCTTGCAGGTGCA+TGG 0.572631 tig0025333:-33835 Msa1421990:intron
TAACGCACTTCCTAATATGT+TGG 0.574662 tig0025333:-32748 Msa1421990:CDS
TTCATTGGCTGGACCAACTG+AGG 0.578208 tig0025333:-35009 Msa1421990:CDS
ACCGTTTACTTTAGACGGAA+CGG 0.578621 tig0025333:+31509 None:intergenic
AGGAACATTCCTATTGGGAG+GGG 0.579237 tig0025333:+31326 None:intergenic
TTGGTTACACTTACACCAGA+AGG 0.580585 tig0025333:+31183 None:intergenic
ATGTCTAGGTCCTACACAAA+GGG 0.581429 tig0025333:+33792 None:intergenic
TCAGGAACATTCCTATTGGG+AGG 0.582232 tig0025333:+31324 None:intergenic
TAGTACAAAACTTCAAATTG+GGG 0.583507 tig0025333:+35425 None:intergenic
GCTGATGAAGAAGAAAGGAA+AGG 0.585497 tig0025333:+35760 None:intergenic
TCACCAACCGATTTCAGACA+GGG 0.590667 tig0025333:+31210 None:intergenic
TTTACTTTAGACGGAACGGA+AGG 0.592044 tig0025333:+31513 None:intergenic
AAACCCTGTCTGAAATCGGT+TGG 0.595123 tig0025333:-31213 Msa1421990:CDS
TAGCCTCTGTAATTTGGGCG+AGG 0.596121 tig0025333:+29723 None:intergenic
AATCAAGTCAATGATAATGG+TGG 0.599209 tig0025333:-31000 Msa1421990:CDS
CTGTGTGTTCAGTACTTGCA+AGG 0.601170 tig0025333:-34717 Msa1421990:intron
GAAGATGCTATCTGAGATGG+AGG 0.602586 tig0025333:-33639 Msa1421990:CDS
CAAGGAGTTCCAGTAAGCGA+AGG 0.604786 tig0025333:-31681 Msa1421990:CDS
GGAGGATAATAATAACTCAA+GGG 0.605118 tig0025333:-31373 Msa1421990:CDS
CATGTCTAGGTCCTACACAA+AGG 0.605652 tig0025333:+33791 None:intergenic
CTGATAAGAGGCTTCTTCTG+TGG 0.607608 tig0025333:+30160 None:intergenic
TCTGGTGTAAGTGTAACCAA+TGG 0.607660 tig0025333:-31180 Msa1421990:CDS
TGTAACCAATGGATCAGCGC+CGG 0.609814 tig0025333:-31169 Msa1421990:CDS
TTGGGTGAAAACCATTAGCA+GGG 0.613271 tig0025333:-34114 Msa1421990:CDS
AGTCAATCTGAAAAGTCTCA+AGG 0.619425 tig0025333:-31447 Msa1421990:CDS
TGGATTGTATGAGAGTCAGC+AGG 0.620641 tig0025333:-34691 Msa1421990:CDS
AAAACCATTAGCAGGGCGAA+GGG 0.624241 tig0025333:-34107 Msa1421990:CDS
GGACATGAGCATCAGGCACA+GGG 0.624494 tig0025333:+33600 None:intergenic
TTATGTCAGATGAGTTCAAG+AGG 0.631066 tig0025333:-32524 Msa1421990:CDS
GCAGGTGCATGGTCCTGGAG+CGG 0.634301 tig0025333:-33824 Msa1421990:intron
CAGACCGTTCTCAGTCTCAA+CGG 0.637873 tig0025333:-33158 Msa1421990:CDS
GGGAGGGGATACAGATGCAG+AGG 0.638680 tig0025333:+31341 None:intergenic
GCAGGACTTAGATATATCAC+AGG 0.640450 tig0025333:-33207 Msa1421990:intron
CATAAAGTAACACTGGTGGA+AGG 0.640783 tig0025333:+31719 None:intergenic
GCACAACATTGAGATTCATG+AGG 0.640999 tig0025333:-32991 Msa1421990:CDS
TGACTCTGAAGTCAATAGCA+TGG 0.641386 tig0025333:-31253 Msa1421990:CDS
TAAACTTGAATTTCATCACA+GGG 0.641698 tig0025333:+33579 None:intergenic
TATGTCAGATGAGTTCAAGA+GGG 0.642723 tig0025333:-32523 Msa1421990:CDS
GACCCATAAAGTAACACTGG+TGG 0.649662 tig0025333:+31715 None:intergenic
GCAGGAATCCCACAAAACAA+TGG 0.650878 tig0025333:+30190 None:intergenic
GCAGACCCATAAAGTAACAC+TGG 0.652223 tig0025333:+31712 None:intergenic
GAAGTGCGTTAGGATAAAGC+TGG 0.655196 tig0025333:+32760 None:intergenic
ATGAGCTTCAACGAGATATG+GGG 0.656210 tig0025333:-31029 Msa1421990:CDS
ACATCCGTTGAGACTGAGAA+CGG 0.658881 tig0025333:+33154 None:intergenic
ATCAGAGTAATGGAAAACAA+TGG 0.661390 tig0025333:-35052 Msa1421990:CDS
TTGTAAGTAGAGTTCATGCA+AGG 0.665172 tig0025333:+32570 None:intergenic
ACCAGACATGATATGCTCGA+TGG 0.670552 tig0025333:+31089 None:intergenic
GACGACCTTAGACAATGGAA+AGG 0.674975 tig0025333:-32035 Msa1421990:CDS
TCTTTAGAGTATATACTCAG+TGG 0.676098 tig0025333:-32716 Msa1421990:CDS
ATACCTTCAATGTCAACTGG+CGG 0.676326 tig0025333:+31994 None:intergenic
GAGGGGAACTGAAATATGTG+AGG 0.677534 tig0025333:-32505 Msa1421990:intron
CACATCCTTAGGGAAAGCAG+TGG 0.680740 tig0025333:-29479 Msa1421990:CDS
ATGTCAGATGAGTTCAAGAG+GGG 0.684064 tig0025333:-32522 Msa1421990:CDS
AAAGTCTCAAGGAAGTAAAG+CGG 0.684248 tig0025333:-31436 Msa1421990:CDS
AGACCTCGCCCAAATTACAG+AGG 0.686860 tig0025333:-29726 Msa1421990:CDS
ATTGTATGAGAGTCAGCAGG+AGG 0.695715 tig0025333:-34688 Msa1421990:CDS
CCAAGCTTCATATTTCCTGG+CGG 0.705009 tig0025333:-31543 Msa1421990:CDS
GACGTTTCACATGAGAGACG+CGG 0.736625 tig0025333:+31574 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAAATTAAAAATA+AGG + tig0025333:29390-29409 None:intergenic 0.0%
!!! TTGTTTTTATTTGAATTTAT+TGG - tig0025333:29810-29829 Msa1421990:intron 10.0%
!!! AAAATTTATTAATTTGTTGA+TGG - tig0025333:29932-29951 Msa1421990:intron 10.0%
!!! AAATTTATTAATTTGTTGAT+GGG - tig0025333:29933-29952 Msa1421990:intron 10.0%
!! AAAAAATCATTATTACTAAA+TGG + tig0025333:31794-31813 None:intergenic 10.0%
!!! ATAATAATAATGAACAATTT+TGG + tig0025333:32142-32161 None:intergenic 10.0%
!!! ATTAATTGACAATATTTTTA+TGG + tig0025333:32590-32609 None:intergenic 10.0%
!! TTTATAATGAATAAAAATCA+TGG + tig0025333:32738-32757 None:intergenic 10.0%
!!! TAAAAATTTCATATTTTGAT+TGG - tig0025333:33133-33152 Msa1421990:CDS 10.0%
!! TTATAATAAAAGATAAACTA+AGG - tig0025333:34417-34436 Msa1421990:intron 10.0%
!! AAGAACAAAAAAAATAAAAA+AGG + tig0025333:34784-34803 None:intergenic 10.0%
!!! TTTTATTTTTTTTGTTCTTT+TGG - tig0025333:34785-34804 Msa1421990:intron 10.0%
!! TTAAATTCTTTATATATCAA+TGG - tig0025333:35396-35415 Msa1421990:five_prime_UTR 10.0%
!!! TTTTTACGATAATAACAAAA+GGG + tig0025333:29676-29695 None:intergenic 15.0%
!!! TCTTTTTTTTTTCAATGATA+GGG + tig0025333:29886-29905 None:intergenic 15.0%
!!! ATCTTTTTTTTTTCAATGAT+AGG + tig0025333:29887-29906 None:intergenic 15.0%
!!! AATTTATTAATTTGTTGATG+GGG - tig0025333:29934-29953 Msa1421990:intron 15.0%
!!! TTTTATTCTATCTTAGAAAT+AGG - tig0025333:30430-30449 Msa1421990:intron 15.0%
!! TTTATTCTATCTTAGAAATA+GGG - tig0025333:30431-30450 Msa1421990:intron 15.0%
!!! TGCAAAAATATTAATACTTT+TGG - tig0025333:31537-31556 Msa1421990:CDS 15.0%
!!! GCAAAAATATTAATACTTTT+GGG - tig0025333:31538-31557 Msa1421990:CDS 15.0%
!!! AATTTGTATGCTTTATTTTT+TGG - tig0025333:31633-31652 Msa1421990:CDS 15.0%
!! TATTGTCAATTAATTTATGT+AGG - tig0025333:32596-32615 Msa1421990:CDS 15.0%
!!! TTTTAAAATGTTTTCGTAAA+AGG - tig0025333:32659-32678 Msa1421990:CDS 15.0%
!! AAATAGTTATATATATGATG+AGG - tig0025333:34252-34271 Msa1421990:intron 15.0%
!! ACAAAATAAGTAAAAAGAAA+TGG + tig0025333:34670-34689 None:intergenic 15.0%
!!! ACTAATTTTTAATAACCATT+TGG - tig0025333:34957-34976 Msa1421990:intron 15.0%
!! TTATGTTATAATATACCAAA+TGG + tig0025333:34975-34994 None:intergenic 15.0%
!! ATAAGAAAAACACAAATATT+TGG - tig0025333:35169-35188 Msa1421990:five_prime_UTR 15.0%
!! TAAGAAAAACACAAATATTT+GGG - tig0025333:35170-35189 Msa1421990:five_prime_UTR 15.0%
!!! AATATTTTAACCTTTTACAA+AGG + tig0025333:35211-35230 None:intergenic 15.0%
!! ATATTAAGAATCCAAATTTA+AGG - tig0025333:35226-35245 Msa1421990:five_prime_UTR 15.0%
!! TATTAAGAATCCAAATTTAA+GGG - tig0025333:35227-35246 Msa1421990:five_prime_UTR 15.0%
!! AAAATTGTTACATAGATAAA+AGG + tig0025333:35641-35660 None:intergenic 15.0%
!!! TTTTATCTATGTAACAATTT+TGG - tig0025333:35640-35659 Msa1421990:intron 15.0%
!!! AAAATCTAATTTTATTTAGC+CGG + tig0025333:35745-35764 None:intergenic 15.0%
!! AAATAAGGAATGAAATTAGA+AGG + tig0025333:29375-29394 None:intergenic 20.0%
!!! TTTATATTTTGAAGCTTTCA+AGG - tig0025333:29447-29466 Msa1421990:exon 20.0%
!! ATAGTACAAAACTTCAAATT+GGG + tig0025333:29604-29623 None:intergenic 20.0%
!! AATAGTACAAAACTTCAAAT+TGG + tig0025333:29605-29624 None:intergenic 20.0%
!!! CTTTTTACGATAATAACAAA+AGG + tig0025333:29677-29696 None:intergenic 20.0%
!! TGTAAGGAAAACAATAAAAA+TGG + tig0025333:31160-31179 None:intergenic 20.0%
!!! ATAAAATATGTGTTTTGTTC+TGG - tig0025333:31733-31752 Msa1421990:CDS 20.0%
!!! AATAATGATTTTTTATGTGC+AGG - tig0025333:31800-31819 Msa1421990:intron 20.0%
!! TTTGTTCTTATTGTGATATT+TGG - tig0025333:32829-32848 Msa1421990:intron 20.0%
!! TTGTTCTTATTGTGATATTT+GGG - tig0025333:32830-32849 Msa1421990:intron 20.0%
!! TTGCTTAAATTTAATGTTTG+TGG - tig0025333:32853-32872 Msa1421990:intron 20.0%
!! AATGACATAGCAAAATTATA+AGG + tig0025333:33103-33122 None:intergenic 20.0%
!! TTCTTCAATAAAATGTTATG+CGG - tig0025333:34222-34241 Msa1421990:intron 20.0%
!! AATTCATATTGTTTCAATGA+GGG - tig0025333:34283-34302 Msa1421990:intron 20.0%
!!! TTACATTTATTTTGTCACTT+AGG - tig0025333:34312-34331 Msa1421990:intron 20.0%
!! CTGAAATAAAACAATTGTTA+AGG + tig0025333:34694-34713 None:intergenic 20.0%
!! CATAATCTATATGAGTTTAA+TGG - tig0025333:34990-35009 Msa1421990:CDS 20.0%
!!! ATTTGTGTTTTTCTTATTGA+GGG + tig0025333:35166-35185 None:intergenic 20.0%
!!! TATTTGTGTTTTTCTTATTG+AGG + tig0025333:35167-35186 None:intergenic 20.0%
!! ATTAAGAATCCAAATTTAAG+GGG - tig0025333:35228-35247 Msa1421990:five_prime_UTR 20.0%
!!! ATGACTATGTAAAACTTTTT+GGG + tig0025333:35342-35361 None:intergenic 20.0%
!! AACCTAAATAACAACATTAA+AGG + tig0025333:35477-35496 None:intergenic 20.0%
! ATTACAGAGAAGAAGAAAAA+GGG + tig0025333:29336-29355 None:intergenic 25.0%
!! TTTTCACAAATTCATTCATC+TGG - tig0025333:29528-29547 Msa1421990:intron 25.0%
! TTTCACAAATTCATTCATCT+GGG - tig0025333:29529-29548 Msa1421990:intron 25.0%
! TAGTACAAAACTTCAAATTG+GGG + tig0025333:29603-29622 None:intergenic 25.0%
!!! GTGTTATTTTCTACTGAATT+TGG - tig0025333:30282-30301 Msa1421990:intron 25.0%
! ATAAACCGATATAGTTTCTA+GGG - tig0025333:30473-30492 Msa1421990:intron 25.0%
!! TTAAATCGTGTTGTTAATTG+TGG - tig0025333:30558-30577 Msa1421990:intron 25.0%
!! TTCTAAATAAAAGCGTATCA+CGG - tig0025333:30650-30669 Msa1421990:intron 25.0%
! AATCACTACAATCAGTATAT+CGG + tig0025333:30790-30809 None:intergenic 25.0%
! GGATATTACGAAATGTATAT+AGG + tig0025333:31139-31158 None:intergenic 25.0%
!! TCGTAGTGAAAAATTTTGTA+AGG + tig0025333:31176-31195 None:intergenic 25.0%
!! ACTGTTATTGTCATTTACAT+TGG - tig0025333:31334-31353 Msa1421990:CDS 25.0%
!! CTGTTATTGTCATTTACATT+GGG - tig0025333:31335-31354 Msa1421990:CDS 25.0%
! TAAACTTGAATTTCATCACA+GGG + tig0025333:31449-31468 None:intergenic 25.0%
! TTAAACTTGAATTTCATCAC+AGG + tig0025333:31450-31469 None:intergenic 25.0%
!! GTGATGAAATTCAAGTTTAA+TGG - tig0025333:31450-31469 Msa1421990:CDS 25.0%
! TTTGCATAGAAAACTTACTT+CGG + tig0025333:31523-31542 None:intergenic 25.0%
! ATTGATATAATCATGCATGA+TGG - tig0025333:32103-32122 Msa1421990:CDS 25.0%
! ATATGGCAAAAAGATACTTT+AGG + tig0025333:32183-32202 None:intergenic 25.0%
! ATTAGATGATATCTATCTCT+GGG + tig0025333:32413-32432 None:intergenic 25.0%
! GAAGCAGTAACATTAATAAA+TGG - tig0025333:32618-32637 Msa1421990:CDS 25.0%
!! ATTTTATCGATCTGATAGTT+TGG - tig0025333:32712-32731 Msa1421990:CDS 25.0%
! TTAATGTTTGTGGTATTTGT+AGG - tig0025333:32863-32882 Msa1421990:intron 25.0%
! TCTTGTAAGCTTCAAAAAAT+GGG + tig0025333:32935-32954 None:intergenic 25.0%
! TTCTTGTAAGCTTCAAAAAA+TGG + tig0025333:32936-32955 None:intergenic 25.0%
!! TGATTCTCGATTTGAAAAAT+AGG - tig0025333:33184-33203 Msa1421990:CDS 25.0%
! ATTATGCTTGAATTCTTCTA+CGG + tig0025333:33393-33412 None:intergenic 25.0%
! AGAAATCAAGTCAATGATAA+TGG - tig0025333:34022-34041 Msa1421990:intron 25.0%
! TCAACTCATTCATTATCTAA+TGG - tig0025333:34133-34152 Msa1421990:intron 25.0%
! TTGAGGTTAATCTCTTATTA+TGG - tig0025333:34170-34189 Msa1421990:intron 25.0%
! CTCTTATTATGGCTTATATT+TGG - tig0025333:34181-34200 Msa1421990:intron 25.0%
! GAATTCATATTGTTTCAATG+AGG - tig0025333:34282-34301 Msa1421990:intron 25.0%
! TTTGGATAAAACACTTACTT+AGG - tig0025333:34340-34359 Msa1421990:intron 25.0%
! GAAAATTACAAGTTGTTTAG+TGG - tig0025333:34725-34744 Msa1421990:intron 25.0%
!! TAACTGCAAAAAGTTTTACA+TGG + tig0025333:35099-35118 None:intergenic 25.0%
!! TGACTATGTAAAACTTTTTG+GGG + tig0025333:35341-35360 None:intergenic 25.0%
!! GATGACTATGTAAAACTTTT+TGG + tig0025333:35343-35362 None:intergenic 25.0%
!!! CTCCTTTAATGTTGTTATTT+AGG - tig0025333:35472-35491 Msa1421990:five_prime_UTR 25.0%
!!! GTTGTTATTTAGGTTAATCT+TGG - tig0025333:35482-35501 Msa1421990:five_prime_UTR 25.0%
! TAATCTTGGCTAAATTTAGT+TGG - tig0025333:35496-35515 Msa1421990:five_prime_UTR 25.0%
!!! ATAAAAGTTGATGGCTTTTT+AGG + tig0025333:35684-35703 None:intergenic 25.0%
! AAAAGTTCGATAAAAGTTGA+TGG + tig0025333:35693-35712 None:intergenic 25.0%
! TGAGAATATATATGTTTCAC+CGG - tig0025333:35723-35742 Msa1421990:five_prime_UTR 25.0%
GATTACAGAGAAGAAGAAAA+AGG + tig0025333:29337-29356 None:intergenic 30.0%
AAGGAATGAAATTAGAAGGT+AGG + tig0025333:29371-29390 None:intergenic 30.0%
!! TCAAGAATTCATCAAGTTGA+AGG - tig0025333:29483-29502 Msa1421990:CDS 30.0%
!! GAATTGTTGATTTAGGGTTA+CGG - tig0025333:29568-29587 Msa1421990:intron 30.0%
TCGTAAAAAGTTCATAGCTT+TGG - tig0025333:29687-29706 Msa1421990:intron 30.0%
!! AAAAAGTTCATAGCTTTGGA+AGG - tig0025333:29691-29710 Msa1421990:intron 30.0%
! ATCAGAGTAATGGAAAACAA+TGG - tig0025333:29973-29992 Msa1421990:intron 30.0%
! AGTAATGGAAAACAATGGTT+AGG - tig0025333:29978-29997 Msa1421990:intron 30.0%
! GTAATGGAAAACAATGGTTA+GGG - tig0025333:29979-29998 Msa1421990:intron 30.0%
ATTGCATCAACAACTAAACA+AGG + tig0025333:30406-30425 None:intergenic 30.0%
GATAAACCGATATAGTTTCT+AGG - tig0025333:30472-30491 Msa1421990:intron 30.0%
TGAATCAGATTGTGAAGATT+TGG - tig0025333:30892-30911 Msa1421990:CDS 30.0%
GAATCAGATTGTGAAGATTT+GGG - tig0025333:30893-30912 Msa1421990:CDS 30.0%
! AATGCCAAGATTTTCACTTT+TGG - tig0025333:30969-30988 Msa1421990:CDS 30.0%
! TTGTCATTTACATTGGGTTT+AGG - tig0025333:31341-31360 Msa1421990:CDS 30.0%
TTGCATAGAAAACTTACTTC+GGG + tig0025333:31522-31541 None:intergenic 30.0%
ATAACCATCACCTGAATATT+TGG + tig0025333:31927-31946 None:intergenic 30.0%
! ATTTACGTCAAGATTTTGTG+TGG - tig0025333:31965-31984 Msa1421990:intron 30.0%
! ATTGAGATTCATGAGGTTTT+GGG - tig0025333:32041-32060 Msa1421990:CDS 30.0%
!! TCTTTAGAGTATATACTCAG+TGG - tig0025333:32309-32328 Msa1421990:intron 30.0%
CATTAGATGATATCTATCTC+TGG + tig0025333:32414-32433 None:intergenic 30.0%
TGAGGTATGATATGATATGT+TGG - tig0025333:32538-32557 Msa1421990:CDS 30.0%
TATTTCCACTTACTGAGATA+AGG - tig0025333:32781-32800 Msa1421990:CDS 30.0%
TAAGCTTCAAAAAATGGGTA+CGG + tig0025333:32930-32949 None:intergenic 30.0%
CAATCTACAAGATTCAAACA+AGG + tig0025333:33220-33239 None:intergenic 30.0%
! TAGATTGAGAAGTACACTTA+TGG - tig0025333:33233-33252 Msa1421990:intron 30.0%
AAGGTGAACAGTTTGATATA+AGG - tig0025333:33363-33382 Msa1421990:intron 30.0%
ATAGACGAAGTTCAAAATCA+AGG - tig0025333:33543-33562 Msa1421990:CDS 30.0%
TAGACGAAGTTCAAAATCAA+GGG - tig0025333:33544-33563 Msa1421990:CDS 30.0%
TGGAGGATAATAATAACTCA+AGG - tig0025333:33651-33670 Msa1421990:CDS 30.0%
GGAGGATAATAATAACTCAA+GGG - tig0025333:33652-33671 Msa1421990:CDS 30.0%
CTAAAAGGATTTCTATCTTC+AGG + tig0025333:33722-33741 None:intergenic 30.0%
TCTTTAGTGTTAGATGTATC+AGG + tig0025333:33902-33921 None:intergenic 30.0%
!! AATCAAGTCAATGATAATGG+TGG - tig0025333:34025-34044 Msa1421990:intron 30.0%
!! GGAAGATCAAGTTATTTCTA+AGG - tig0025333:34099-34118 Msa1421990:CDS 30.0%
ACTCATTCATTATCTAATGG+AGG - tig0025333:34136-34155 Msa1421990:intron 30.0%
ATTAGTTATCCTGAAGAGTA+TGG - tig0025333:34467-34486 Msa1421990:intron 30.0%
AACTTATTTCCATACTCTTC+AGG + tig0025333:34479-34498 None:intergenic 30.0%
!! GATTGGATTGTCTTATTTAC+TGG + tig0025333:34564-34583 None:intergenic 30.0%
TAACATTGTACTTGTCATAG+TGG - tig0025333:34908-34927 Msa1421990:intron 30.0%
!!! ATAGTGGACCAATTGATTTT+TGG - tig0025333:34924-34943 Msa1421990:intron 30.0%
ATTGCAGACCAAAAATCAAT+TGG + tig0025333:34935-34954 None:intergenic 30.0%
GCACTATAGTCATATATGAT+TGG + tig0025333:35032-35051 None:intergenic 30.0%
!! TCGATTTGTTGAGATATCTT+AGG + tig0025333:35073-35092 None:intergenic 30.0%
TCAAATAGCCCTTGTAATTT+CGG - tig0025333:35124-35143 Msa1421990:five_prime_UTR 30.0%
TCTGAAAAAGCCTTTGTAAA+AGG - tig0025333:35198-35217 Msa1421990:five_prime_UTR 30.0%
TCAAATAGCCTCTGTAATTT+GGG + tig0025333:35310-35329 None:intergenic 30.0%
! TTGAGATATTTTATCAGTGC+AGG - tig0025333:35369-35388 Msa1421990:five_prime_UTR 30.0%
TATTAGAAGTTGCTCCATTA+TGG - tig0025333:35420-35439 Msa1421990:five_prime_UTR 30.0%
GAATGAATTGCTATCCATAA+TGG + tig0025333:35437-35456 None:intergenic 30.0%
TGAAGTTCAACCTGAAAATA+AGG + tig0025333:35528-35547 None:intergenic 30.0%
!! CTATGTAACAATTTTGGTGA+AGG - tig0025333:35646-35665 Msa1421990:intron 30.0%
CTGATGAAGAAGAAAGGAAA+GGG + tig0025333:29267-29286 None:intergenic 35.0%
GATATGCTGATGAAGAAGAA+AGG + tig0025333:29273-29292 None:intergenic 35.0%
!! TTGCTCGGAATTGTTGATTT+AGG - tig0025333:29561-29580 Msa1421990:intron 35.0%
!! TGCTCGGAATTGTTGATTTA+GGG - tig0025333:29562-29581 Msa1421990:intron 35.0%
GATAACTGAGCCAATTTCAT+TGG - tig0025333:30001-30020 Msa1421990:intron 35.0%
AAAGACTCGTGAACTTGAAA+AGG - tig0025333:30049-30068 Msa1421990:intron 35.0%
CTATCTTAGAAATAGGGAGT+AGG - tig0025333:30437-30456 Msa1421990:intron 35.0%
TCTGACCCTAGAAACTATAT+CGG + tig0025333:30481-30500 None:intergenic 35.0%
!! AGTTTCTAGGGTCAGAAAAT+TGG - tig0025333:30485-30504 Msa1421990:intron 35.0%
! GTGTTGTTAATTGTGGATCA+TGG - tig0025333:30565-30584 Msa1421990:intron 35.0%
TGTGGATCATGGAAAATAGA+TGG - tig0025333:30576-30595 Msa1421990:intron 35.0%
CGGAAATGTTCAATGAAGAT+TGG + tig0025333:30770-30789 None:intergenic 35.0%
!!! TTTTCACTTTTGGCTCCTAT+CGG - tig0025333:30979-30998 Msa1421990:CDS 35.0%
GTACACAAACGAGAAAGATT+TGG + tig0025333:31032-31051 None:intergenic 35.0%
TGTACATACACTCTGTTGAA+AGG - tig0025333:31047-31066 Msa1421990:CDS 35.0%
TGACGAATCACTATGAAACT+AGG - tig0025333:31078-31097 Msa1421990:CDS 35.0%
! TTTTTCACTACGAATCTTGC+AGG - tig0025333:31183-31202 Msa1421990:CDS 35.0%
GATATAGATACCCTTTGTGT+AGG - tig0025333:31223-31242 Msa1421990:CDS 35.0%
GCAACATTATCATACATCTC+TGG + tig0025333:31263-31282 None:intergenic 35.0%
TCATTTACATTGGGTTTAGG+AGG - tig0025333:31344-31363 Msa1421990:CDS 35.0%
TTGGAAGCAGATACAAAGAA+AGG + tig0025333:31596-31615 None:intergenic 35.0%
! GCGTTTAGTTCCAAATATTC+AGG - tig0025333:31914-31933 Msa1421990:intron 35.0%
AGTTCCAAATATTCAGGTGA+TGG - tig0025333:31920-31939 Msa1421990:intron 35.0%
! CATTGAGATTCATGAGGTTT+TGG - tig0025333:32040-32059 Msa1421990:CDS 35.0%
! CTTTTTGCCATATTATTCGC+AGG - tig0025333:32190-32209 Msa1421990:intron 35.0%
! TTTTCTGGGTGGTATAAATC+TGG - tig0025333:32220-32239 Msa1421990:intron 35.0%
ATAAATCTGGCATTGCTTGT+TGG - tig0025333:32233-32252 Msa1421990:intron 35.0%
! AACATATTAGGAAGTGCGTT+AGG + tig0025333:32278-32297 None:intergenic 35.0%
TAACGCACTTCCTAATATGT+TGG - tig0025333:32277-32296 Msa1421990:intron 35.0%
AATCGAGACACCAACATATT+AGG + tig0025333:32290-32309 None:intergenic 35.0%
! ATGCTTTGTGCTATTGAAGA+AGG - tig0025333:32350-32369 Msa1421990:intron 35.0%
GGATAAGCAGGAGTAATTAT+AGG + tig0025333:32437-32456 None:intergenic 35.0%
TTGTAAGTAGAGTTCATGCA+AGG + tig0025333:32458-32477 None:intergenic 35.0%
TTATGTCAGATGAGTTCAAG+AGG - tig0025333:32501-32520 Msa1421990:intron 35.0%
TATGTCAGATGAGTTCAAGA+GGG - tig0025333:32502-32521 Msa1421990:intron 35.0%
TTTGTGGTATTTGTAGGCTA+TGG - tig0025333:32869-32888 Msa1421990:intron 35.0%
CTGCTGTAATGTCTATTTGT+AGG + tig0025333:32962-32981 None:intergenic 35.0%
GTTATACCTTCAATGTCAAC+TGG + tig0025333:33037-33056 None:intergenic 35.0%
!! TTCCACCAGTGTTACTTTAT+GGG - tig0025333:33308-33327 Msa1421990:intron 35.0%
ATACCAAGCTTCATATTTCC+TGG - tig0025333:33479-33498 Msa1421990:intron 35.0%
TTCTCACCGTTTACTTTAGA+CGG + tig0025333:33524-33543 None:intergenic 35.0%
AGTCAATCTGAAAAGTCTCA+AGG - tig0025333:33578-33597 Msa1421990:CDS 35.0%
AAAGTCTCAAGGAAGTAAAG+CGG - tig0025333:33589-33608 Msa1421990:CDS 35.0%
CTTTCTCTTCCTTTCATCAT+CGG + tig0025333:33627-33646 None:intergenic 35.0%
TCTTCAGGAACATTCCTATT+GGG + tig0025333:33707-33726 None:intergenic 35.0%
ATCTTCAGGAACATTCCTAT+TGG + tig0025333:33708-33727 None:intergenic 35.0%
CAAGAACTAGTAGCACTAAA+AGG + tig0025333:33737-33756 None:intergenic 35.0%
!! GCATCAAGTTGTTTGTTATC+CGG + tig0025333:33878-33897 None:intergenic 35.0%
CTCTTCAAATCCAAATCTTG+CGG - tig0025333:34072-34091 Msa1421990:CDS 35.0%
TTCATTATCTAATGGAGGCT+TGG - tig0025333:34141-34160 Msa1421990:intron 35.0%
! TTTGTCACTTAGGTTCTGTT+TGG - tig0025333:34322-34341 Msa1421990:intron 35.0%
TCTTGGATTAAGGGATTGAT+TGG + tig0025333:34581-34600 None:intergenic 35.0%
GTTTGTGTGTCTTGGATTAA+GGG + tig0025333:34590-34609 None:intergenic 35.0%
TGTTTGTGTGTCTTGGATTA+AGG + tig0025333:34591-34610 None:intergenic 35.0%
TATTGTCCATACCTGATAAG+AGG + tig0025333:34880-34899 None:intergenic 35.0%
GAAATTACAAGGGCTATTTG+AGG + tig0025333:35125-35144 None:intergenic 35.0%
AAACCTTGCCGAAATTACAA+GGG + tig0025333:35135-35154 None:intergenic 35.0%
AAGAATCCAAATTTAAGGGG+TGG - tig0025333:35231-35250 Msa1421990:five_prime_UTR 35.0%
CTCAAATAGCCTCTGTAATT+TGG + tig0025333:35311-35330 None:intergenic 35.0%
CAAATTACAGAGGCTATTTG+AGG - tig0025333:35309-35328 Msa1421990:five_prime_UTR 35.0%
!!! TTGGTTGACTCCTTATTTTC+AGG - tig0025333:35515-35534 Msa1421990:five_prime_UTR 35.0%
GCTGATGAAGAAGAAAGGAA+AGG + tig0025333:29268-29287 None:intergenic 40.0%
TACTCTGATTTCCCATTCCA+GGG + tig0025333:29962-29981 None:intergenic 40.0%
TTACTCTGATTTCCCATTCC+AGG + tig0025333:29963-29982 None:intergenic 40.0%
GGAATGGGAAATCAGAGTAA+TGG - tig0025333:29963-29982 Msa1421990:intron 40.0%
TTTGTCACATCTTCCTCAGT+TGG + tig0025333:30032-30051 None:intergenic 40.0%
CAATGTGTTAGTGTCGTGTT+TGG + tig0025333:30142-30161 None:intergenic 40.0%
ACAACTAAACAAGGTCAACC+TGG + tig0025333:30397-30416 None:intergenic 40.0%
TTTGGGTGAAAACCATTAGC+AGG - tig0025333:30910-30929 Msa1421990:CDS 40.0%
TTGGGTGAAAACCATTAGCA+GGG - tig0025333:30911-30930 Msa1421990:CDS 40.0%
GAAGGGATTCAATGAACAAC+TGG - tig0025333:30935-30954 Msa1421990:CDS 40.0%
ATTCAATGAACAACTGGTGC+AGG - tig0025333:30941-30960 Msa1421990:CDS 40.0%
GGAGCCAAAAGTGAAAATCT+TGG + tig0025333:30976-30995 None:intergenic 40.0%
ATGTCTAGGTCCTACACAAA+GGG + tig0025333:31236-31255 None:intergenic 40.0%
TGGGTTTAGGAGGATTTCTT+TGG - tig0025333:31354-31373 Msa1421990:CDS 40.0%
ACAGAAGATGCTATCTGAGA+TGG - tig0025333:31383-31402 Msa1421990:CDS 40.0%
TGATCTCCTGTATGCAAGAT+TGG - tig0025333:31482-31501 Msa1421990:CDS 40.0%
ACAATGCCAATCTTGCATAC+AGG + tig0025333:31491-31510 None:intergenic 40.0%
TGTATGCAAGATTGGCATTG+TGG - tig0025333:31490-31509 Msa1421990:CDS 40.0%
GTATGCAAGATTGGCATTGT+GGG - tig0025333:31491-31510 Msa1421990:CDS 40.0%
TTCTTGTCCACACAACTCTT+TGG + tig0025333:31615-31634 None:intergenic 40.0%
GCAGGACTTAGATATATCAC+AGG - tig0025333:31818-31837 Msa1421990:intron 40.0%
GCACAACATTGAGATTCATG+AGG - tig0025333:32034-32053 Msa1421990:CDS 40.0%
TCAATAGCACAAAGCATGAC+TGG + tig0025333:32347-32366 None:intergenic 40.0%
GCTATTGAAGAAGGATCTCT+TGG - tig0025333:32359-32378 Msa1421990:intron 40.0%
AGAAGGATCTCTTGGACTAT+CGG - tig0025333:32367-32386 Msa1421990:intron 40.0%
!! ATCTCTTGGACTATCGGTTT+GGG - tig0025333:32373-32392 Msa1421990:intron 40.0%
!! CTATCTCTGGGATTTCTTCT+AGG + tig0025333:32401-32420 None:intergenic 40.0%
ATGTCAGATGAGTTCAAGAG+GGG - tig0025333:32503-32522 Msa1421990:intron 40.0%
CCAAACCTTATCTCAGTAAG+TGG + tig0025333:32789-32808 None:intergenic 40.0%
CCACTTACTGAGATAAGGTT+TGG - tig0025333:32786-32805 Msa1421990:CDS 40.0%
ACCTTAGACAATGGAAAGGT+TGG - tig0025333:32994-33013 Msa1421990:CDS 40.0%
CCTTAGACAATGGAAAGGTT+GGG - tig0025333:32995-33014 Msa1421990:CDS 40.0%
ATACCTTCAATGTCAACTGG+CGG + tig0025333:33034-33053 None:intergenic 40.0%
TCTGAAAATTCGCCAGGATA+CGG + tig0025333:33275-33294 None:intergenic 40.0%
GATTTGTCTGAAAATTCGCC+AGG + tig0025333:33281-33300 None:intergenic 40.0%
CATAAAGTAACACTGGTGGA+AGG + tig0025333:33309-33328 None:intergenic 40.0%
!! CTTCCACCAGTGTTACTTTA+TGG - tig0025333:33307-33326 Msa1421990:intron 40.0%
TTTACTTTAGACGGAACGGA+AGG + tig0025333:33515-33534 None:intergenic 40.0%
! TCCGTTCCGTCTAAAGTAAA+CGG - tig0025333:33515-33534 Msa1421990:intron 40.0%
ACCGTTTACTTTAGACGGAA+CGG + tig0025333:33519-33538 None:intergenic 40.0%
AGTTCAAAATCAAGGGTTGC+TGG - tig0025333:33551-33570 Msa1421990:CDS 40.0%
AAGTCTCAAGGAAGTAAAGC+GGG - tig0025333:33590-33609 Msa1421990:CDS 40.0%
TGAAAGGAAGAGAAAGCGAT+TGG - tig0025333:33631-33650 Msa1421990:CDS 40.0%
!! TGACTCTGAAGTCAATAGCA+TGG - tig0025333:33772-33791 Msa1421990:intron 40.0%
TTGGTTACACTTACACCAGA+AGG + tig0025333:33845-33864 None:intergenic 40.0%
TCTGGTGTAAGTGTAACCAA+TGG - tig0025333:33845-33864 Msa1421990:intron 40.0%
AAAGCTTGATGCGCTTCATA+CGG + tig0025333:33962-33981 None:intergenic 40.0%
ATATCTCGTTGAAGCTCATC+AGG + tig0025333:33995-34014 None:intergenic 40.0%
TGATGAGCTTCAACGAGATA+TGG - tig0025333:33994-34013 Msa1421990:intron 40.0%
GATGAGCTTCAACGAGATAT+GGG - tig0025333:33995-34014 Msa1421990:intron 40.0%
ATGAGCTTCAACGAGATATG+GGG - tig0025333:33996-34015 Msa1421990:intron 40.0%
AAATCCAAATCTTGCGGTAG+TGG - tig0025333:34078-34097 Msa1421990:CDS 40.0%
ATTATCTAATGGAGGCTTGG+AGG - tig0025333:34144-34163 Msa1421990:intron 40.0%
ATGCAGTTGTTTGTGTGTCT+TGG + tig0025333:34598-34617 None:intergenic 40.0%
! GATCATCGCTCTAAATGTGA+AGG + tig0025333:34648-34667 None:intergenic 40.0%
!! TGACAGCACCATTGTTTTGT+GGG - tig0025333:34827-34846 Msa1421990:intron 40.0%
AAGAAGCCTCTTATCAGGTA+TGG - tig0025333:34871-34890 Msa1421990:intron 40.0%
CAAACCTTGCCGAAATTACA+AGG + tig0025333:35136-35155 None:intergenic 40.0%
CAGATTCCACCCCTTAAATT+TGG + tig0025333:35240-35259 None:intergenic 40.0%
AATTTAAGGGGTGGAATCTG+TGG - tig0025333:35240-35259 Msa1421990:five_prime_UTR 40.0%
AGGTTGAACTTCACATCCTT+AGG - tig0025333:35535-35554 Msa1421990:five_prime_UTR 40.0%
GGTTGAACTTCACATCCTTA+GGG - tig0025333:35536-35555 Msa1421990:five_prime_UTR 40.0%
! TTTTTCCACTGCTTTCCCTA+AGG + tig0025333:35554-35573 None:intergenic 40.0%
!!! AGTTGATGGCTTTTTAGGAC+AGG + tig0025333:35679-35698 None:intergenic 40.0%
!! AATTTGTTGATGGGGATCCC+TGG - tig0025333:29942-29961 Msa1421990:intron 45.0%
ACTGAGCCAATTTCATTGGC+TGG - tig0025333:30005-30024 Msa1421990:intron 45.0%
GTTGGTCCAGCCAATGAAAT+TGG + tig0025333:30014-30033 None:intergenic 45.0%
GCACAGACACTTCTTATCGA+AGG + tig0025333:30248-30267 None:intergenic 45.0%
CTGTGTGTTCAGTACTTGCA+AGG - tig0025333:30308-30327 Msa1421990:intron 45.0%
TGGATTGTATGAGAGTCAGC+AGG - tig0025333:30334-30353 Msa1421990:intron 45.0%
ATTGTATGAGAGTCAGCAGG+AGG - tig0025333:30337-30356 Msa1421990:intron 45.0%
TTCAAATTTCGCTGCGCTTC+AGG - tig0025333:30688-30707 Msa1421990:intron 45.0%
AAAACCATTAGCAGGGCGAA+GGG - tig0025333:30918-30937 Msa1421990:CDS 45.0%
CATGTCTAGGTCCTACACAA+AGG + tig0025333:31237-31256 None:intergenic 45.0%
ACATCTCTGGTTGCATGTCT+AGG + tig0025333:31250-31269 None:intergenic 45.0%
! GAAGATGCTATCTGAGATGG+AGG - tig0025333:31386-31405 Msa1421990:CDS 45.0%
TCTGCTTCCAAAGAGTTGTG+TGG - tig0025333:31605-31624 Msa1421990:CDS 45.0%
ACATCCGTTGAGACTGAGAA+CGG + tig0025333:31874-31893 None:intergenic 45.0%
CCAGCAACCTGCGAATAATA+TGG + tig0025333:32200-32219 None:intergenic 45.0%
CCATATTATTCGCAGGTTGC+TGG - tig0025333:32197-32216 Msa1421990:intron 45.0%
GAAGTGCGTTAGGATAAAGC+TGG + tig0025333:32268-32287 None:intergenic 45.0%
GAGTATATACTCAGTGGCGA+TGG - tig0025333:32315-32334 Msa1421990:intron 45.0%
GCACAAAGCATGACTGGATT+TGG + tig0025333:32341-32360 None:intergenic 45.0%
! GATCTCTTGGACTATCGGTT+TGG - tig0025333:32372-32391 Msa1421990:intron 45.0%
GAGTTCATGCAAGGATAAGC+AGG + tig0025333:32449-32468 None:intergenic 45.0%
GAGGGGAACTGAAATATGTG+AGG - tig0025333:32520-32539 Msa1421990:CDS 45.0%
GTGGTATTTGTAGGCTATGG+AGG - tig0025333:32872-32891 Msa1421990:intron 45.0%
ATCCAGACGACCTTAGACAA+TGG - tig0025333:32985-33004 Msa1421990:CDS 45.0%
! TTCCATTGTCTAAGGTCGTC+TGG + tig0025333:32990-33009 None:intergenic 45.0%
GACGACCTTAGACAATGGAA+AGG - tig0025333:32990-33009 Msa1421990:CDS 45.0%
CCCAACCTTTCCATTGTCTA+AGG + tig0025333:32998-33017 None:intergenic 45.0%
GACCCATAAAGTAACACTGG+TGG + tig0025333:33313-33332 None:intergenic 45.0%
GCAGACCCATAAAGTAACAC+TGG + tig0025333:33316-33335 None:intergenic 45.0%
AACTGTTCACCTTCGCTTAC+TGG + tig0025333:33356-33375 None:intergenic 45.0%
ATGTAAACGCGTACACTGCA+TGG - tig0025333:33411-33430 Msa1421990:intron 45.0%
CCAAGCTTCATATTTCCTGG+CGG - tig0025333:33482-33501 Msa1421990:intron 45.0%
TACTTGGAGCCGATGATGAA+AGG - tig0025333:33615-33634 Msa1421990:CDS 45.0%
AAGGAAGAGAAAGCGATTGG+AGG - tig0025333:33634-33653 Msa1421990:CDS 45.0%
AGGAACATTCCTATTGGGAG+GGG + tig0025333:33702-33721 None:intergenic 45.0%
CAGGAACATTCCTATTGGGA+GGG + tig0025333:33703-33722 None:intergenic 45.0%
TCAGGAACATTCCTATTGGG+AGG + tig0025333:33704-33723 None:intergenic 45.0%
! CGAGAAACCCTGTCTGAAAT+CGG - tig0025333:33808-33827 Msa1421990:CDS 45.0%
! AAACCCTGTCTGAAATCGGT+TGG - tig0025333:33812-33831 Msa1421990:CDS 45.0%
! TCACCAACCGATTTCAGACA+GGG + tig0025333:33818-33837 None:intergenic 45.0%
ACCAGACATGATATGCTCGA+TGG + tig0025333:33939-33958 None:intergenic 45.0%
TCTTCCACTACCGCAAGATT+TGG + tig0025333:34085-34104 None:intergenic 45.0%
CACTTGTCTGAGAGAGCTTA+TGG + tig0025333:34535-34554 None:intergenic 45.0%
!! CTGACAGCACCATTGTTTTG+TGG - tig0025333:34826-34845 Msa1421990:intron 45.0%
GCAGGAATCCCACAAAACAA+TGG + tig0025333:34838-34857 None:intergenic 45.0%
CTGATAAGAGGCTTCTTCTG+TGG + tig0025333:34868-34887 None:intergenic 45.0%
CACAGAAGAAGCCTCTTATC+AGG - tig0025333:34866-34885 Msa1421990:intron 45.0%
TAGCCCTTGTAATTTCGGCA+AGG - tig0025333:35129-35148 Msa1421990:five_prime_UTR 45.0%
TGCGAGCGATGATATGGCTT+TGG + tig0025333:29313-29332 None:intergenic 50.0%
! AAAGGGTGCGAGCGATGATA+TGG + tig0025333:29319-29338 None:intergenic 50.0%
TCTGGGTCATCGTGATTGCT+CGG - tig0025333:29546-29565 Msa1421990:intron 50.0%
TTGATGGGGATCCCTGGAAT+GGG - tig0025333:29948-29967 Msa1421990:intron 50.0%
! TTCATTGGCTGGACCAACTG+AGG - tig0025333:30016-30035 Msa1421990:intron 50.0%
GTCAGTGTCGTGTCATGTGT+CGG - tig0025333:30210-30229 Msa1421990:CDS 50.0%
GTTCAGTACTTGCAAGGTGC+TGG - tig0025333:30314-30333 Msa1421990:intron 50.0%
GAAAACCATTAGCAGGGCGA+AGG - tig0025333:30917-30936 Msa1421990:CDS 50.0%
!!! ACTTTTGGCTCCTATCGGCT+AGG - tig0025333:30984-31003 Msa1421990:CDS 50.0%
!!! CTTTTGGCTCCTATCGGCTA+GGG - tig0025333:30985-31004 Msa1421990:CDS 50.0%
!!! TTTTGGCTCCTATCGGCTAG+GGG - tig0025333:30986-31005 Msa1421990:CDS 50.0%
CTACGAATCTTGCAGGTGCA+TGG - tig0025333:31190-31209 Msa1421990:CDS 50.0%
! AGGGTATCTATATCCGCTCC+AGG + tig0025333:31217-31236 None:intergenic 50.0%
ATCACAGGGACATGAGCATC+AGG + tig0025333:31435-31454 None:intergenic 50.0%
CAGACCGTTCTCAGTCTCAA+CGG - tig0025333:31867-31886 Msa1421990:intron 50.0%
!!! TTCGCAGGTTGCTGGTTTTC+TGG - tig0025333:32205-32224 Msa1421990:intron 50.0%
!!! TCGCAGGTTGCTGGTTTTCT+GGG - tig0025333:32206-32225 Msa1421990:intron 50.0%
TGGAGGCTAGCAAAGCTGAT+TGG - tig0025333:32889-32908 Msa1421990:intron 50.0%
GGAGGCTAGCAAAGCTGATT+GGG - tig0025333:32890-32909 Msa1421990:intron 50.0%
TCTCCGCCAGTTGACATTGA+AGG - tig0025333:33028-33047 Msa1421990:intron 50.0%
CAAGGAGTTCCAGTAAGCGA+AGG - tig0025333:33344-33363 Msa1421990:intron 50.0%
CACTGCATGGAAACCTGGAA+TGG - tig0025333:33424-33443 Msa1421990:intron 50.0%
GACGTTTCACATGAGAGACG+CGG + tig0025333:33454-33473 None:intergenic 50.0%
CCGCCAGGAAATATGAAGCT+TGG + tig0025333:33485-33504 None:intergenic 50.0%
GGAAGTAAAGCGGGTGTACT+TGG - tig0025333:33599-33618 Msa1421990:CDS 50.0%
CATCTGTATCCCCTCCCAAT+AGG - tig0025333:33690-33709 Msa1421990:intron 50.0%
! CTCACCAACCGATTTCAGAC+AGG + tig0025333:33819-33838 None:intergenic 50.0%
!! TCGGTTGGTGAGATTCCTTC+TGG - tig0025333:33827-33846 Msa1421990:intron 50.0%
TGTAACCAATGGATCAGCGC+CGG - tig0025333:33856-33875 Msa1421990:intron 50.0%
GCCATCGAGCATATCATGTC+TGG - tig0025333:33935-33954 Msa1421990:intron 50.0%
TTCTTCTGTGGTACAGGAGC+AGG + tig0025333:34856-34875 None:intergenic 50.0%
AGAGGCTTCTTCTGTGGTAC+AGG + tig0025333:34862-34881 None:intergenic 50.0%
AGACCTCGCCCAAATTACAG+AGG - tig0025333:35299-35318 Msa1421990:five_prime_UTR 50.0%
TAGCCTCTGTAATTTGGGCG+AGG + tig0025333:35305-35324 None:intergenic 50.0%
CACATCCTTAGGGAAAGCAG+TGG - tig0025333:35546-35565 Msa1421990:five_prime_UTR 50.0%
! GTTGATGGGGATCCCTGGAA+TGG - tig0025333:29947-29966 Msa1421990:intron 55.0%
! TCAGCAGGAGGCAGTTGGTA+GGG - tig0025333:30349-30368 Msa1421990:intron 55.0%
GAATCCCTTCGCCCTGCTAA+TGG + tig0025333:30925-30944 None:intergenic 55.0%
ATCTTGCAGGTGCATGGTCC+TGG - tig0025333:31196-31215 Msa1421990:CDS 55.0%
GGACATGAGCATCAGGCACA+GGG + tig0025333:31428-31447 None:intergenic 55.0%
!!! AGGTTTTGGGCAAAGCGTCG+TGG - tig0025333:32054-32073 Msa1421990:CDS 55.0%
!!! CAGGTTGCTGGTTTTCTGGG+TGG - tig0025333:32209-32228 Msa1421990:intron 55.0%
ATGGGTCTGCAGCGTAAGCA+AGG - tig0025333:33326-33345 Msa1421990:intron 55.0%
GCGTACACTGCATGGAAACC+TGG - tig0025333:33419-33438 Msa1421990:intron 55.0%
!! GTTATCCGGCGCTGATCCAT+TGG + tig0025333:33864-33883 None:intergenic 55.0%
!! AATGGTGCTGTCAGCTCAGC+AGG + tig0025333:34820-34839 None:intergenic 55.0%
GAGAGTCAGCAGGAGGCAGT+TGG - tig0025333:30344-30363 Msa1421990:intron 60.0%
GTCAGCAGGAGGCAGTTGGT+AGG - tig0025333:30348-30367 Msa1421990:intron 60.0%
!! GTTGGTAGGGAGGAGGTGCT+TGG - tig0025333:30362-30381 Msa1421990:intron 60.0%
! GCTCCTATCGGCTAGGGGTA+CGG - tig0025333:30991-31010 Msa1421990:CDS 60.0%
GGGACATGAGCATCAGGCAC+AGG + tig0025333:31429-31448 None:intergenic 60.0%
GAGACGCGGATGTCCATTCC+AGG + tig0025333:33440-33459 None:intergenic 60.0%
GGGAGGGGATACAGATGCAG+AGG + tig0025333:33687-33706 None:intergenic 60.0%
TGGAGGCTTGGAGGAGCTTG+AGG - tig0025333:34153-34172 Msa1421990:intron 60.0%
!! GCAGGAGGCAGTTGGTAGGG+AGG - tig0025333:30352-30371 Msa1421990:intron 65.0%
!! GGAGGCAGTTGGTAGGGAGG+AGG - tig0025333:30355-30374 Msa1421990:intron 65.0%
!! GGAGGAGGTGCTTGGCAGAC+TGG - tig0025333:30370-30389 Msa1421990:intron 65.0%
GGTGCTTGGCAGACTGGACC+AGG - tig0025333:30376-30395 Msa1421990:intron 65.0%
GCTCCGTACCCCTAGCCGAT+AGG + tig0025333:30997-31016 None:intergenic 65.0%
GCAGGTGCATGGTCCTGGAG+CGG - tig0025333:31201-31220 Msa1421990:CDS 65.0%
ACGGAAGGTCGAACGCCGCC+AGG + tig0025333:33500-33519 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0025333 gene 29262 35785 29262 ID=Msa1421990;Name=Msa1421990
tig0025333 mRNA 29262 35785 29262 ID=Msa1421990-mRNA-1;Parent=Msa1421990;Name=Msa1421990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=579|0.84|0.92|0.92|0.92|0.85|14|186|772
tig0025333 exon 29262 29510 29262 ID=Msa1421990-mRNA-1:exon:2405;Parent=Msa1421990-mRNA-1
tig0025333 exon 29717 29759 29717 ID=Msa1421990-mRNA-1:exon:2404;Parent=Msa1421990-mRNA-1
tig0025333 exon 30160 30230 30160 ID=Msa1421990-mRNA-1:exon:2403;Parent=Msa1421990-mRNA-1
tig0025333 exon 30873 31811 30873 ID=Msa1421990-mRNA-1:exon:2402;Parent=Msa1421990-mRNA-1
tig0025333 exon 31998 32162 31998 ID=Msa1421990-mRNA-1:exon:2401;Parent=Msa1421990-mRNA-1
tig0025333 exon 32506 32835 32506 ID=Msa1421990-mRNA-1:exon:2400;Parent=Msa1421990-mRNA-1
tig0025333 exon 32958 33020 32958 ID=Msa1421990-mRNA-1:exon:2399;Parent=Msa1421990-mRNA-1
tig0025333 exon 33112 33225 33112 ID=Msa1421990-mRNA-1:exon:2398;Parent=Msa1421990-mRNA-1
tig0025333 exon 33523 33684 33523 ID=Msa1421990-mRNA-1:exon:2397;Parent=Msa1421990-mRNA-1
tig0025333 exon 33780 33842 33780 ID=Msa1421990-mRNA-1:exon:2396;Parent=Msa1421990-mRNA-1
tig0025333 exon 34040 34147 34040 ID=Msa1421990-mRNA-1:exon:2395;Parent=Msa1421990-mRNA-1
tig0025333 exon 34650 34727 34650 ID=Msa1421990-mRNA-1:exon:2394;Parent=Msa1421990-mRNA-1
tig0025333 exon 34977 35586 34977 ID=Msa1421990-mRNA-1:exon:2393;Parent=Msa1421990-mRNA-1
tig0025333 exon 35697 35785 35697 ID=Msa1421990-mRNA-1:exon:2392;Parent=Msa1421990-mRNA-1
tig0025333 five_prime_UTR 35697 35785 35697 ID=Msa1421990-mRNA-1:five_prime_utr;Parent=Msa1421990-mRNA-1
tig0025333 five_prime_UTR 35097 35586 35097 ID=Msa1421990-mRNA-1:five_prime_utr;Parent=Msa1421990-mRNA-1
tig0025333 CDS 34977 35096 34977 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 34650 34727 34650 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 34040 34147 34040 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 33780 33842 33780 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 33523 33684 33523 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 33112 33225 33112 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 32958 33020 32958 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 32506 32835 32506 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 31998 32162 31998 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 30873 31811 30873 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 30160 30230 30160 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 29717 29759 29717 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 CDS 29448 29510 29448 ID=Msa1421990-mRNA-1:cds;Parent=Msa1421990-mRNA-1
tig0025333 three_prime_UTR 29262 29447 29262 ID=Msa1421990-mRNA-1:three_prime_utr;Parent=Msa1421990-mRNA-1
Gene Sequence

>Msa1421990

ATGGGGATCCCTGGAATGGGAAATCAGAGTAATGGAAAACAATGGTTAGGGATAACTGAGCCAATTTCATTGGCTGGACCAACTGAGGAAGATGTGACAAAGACTCGTGAACTTGAAAAGTACTTGCAAGGTGCTGGATTGTATGAGAGTCAGCAGGAGGCAGTTGGTAGGGAGGAGGTGCTTGGCAGACTGGACCAGATTGTGAAGATTTGGGTGAAAACCATTAGCAGGGCGAAGGGATTCAATGAACAACTGGTGCAGGAAGCAAATGCCAAGATTTTCACTTTTGGCTCCTATCGGCTAGGGGTGCATGGTCCTGGAGCGGATATAGATACCCTTTGTGTAGGACCTAGACATGCAACCAGAGATGAGGATTTCTTTGGTGAGCTACAGAAGATGCTATCTGAGATGGAGGAAGTAACTGAATTGCACCCTGTGCCTGATGCTCATGTCCCTGTGATGAAATTCAAGTTTAATGGAGTTTCTGTTGATCTCCTGTATGCAAGATTGGCATTGTGGGTTATTCCCGAAGACTTAGATATATCACAGGAATCAATATTACAAAATGTAGATGAACAGACCGTTCTCAGTCTCAACGGATGTAGAGTAACTGATCAAGTCTTGCGTTTAGTTCCAAATATTCAGAATTTTCGCACAACATTGAGATTCATGAGGTTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTGCTGGTTTTCTGGGTGGTATAAATCTGGCATTGCTTGTTGGTCGAATATGCCAGCTTTATCCTAACGCACTTCCTAATATGTTGGTGTCTCGATTCTTTAGAGTATATACTCAGTGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTATCGGTTTGGGATCCTAGAAGAAATCCCAGAGATAGATATCATCTAATGCCTATAATTACTCCTGCTTATCCTTGCATGAACTCTACTTACAATGTGACAACAAGTACACTGCGTATTATGTCAGATGAGTTCAAGAGGGGAACTGAAATATGTGAGGCTATGGAGGCTAGCAAAGCTGATTGGGATACTCTTTTTGAGCCGTACCCATTTTTTGAAGCTTACAAGAATTACCTACAAATAGACATTACAGCAGAGAATCCAGACGACCTTAGACAATGGAAAGGTTGGGTTGAGTCTCGTCTCCGCCAGTTGACATTGAAGATTGAGAAGTACACTTATGGTATGCTTCAGTGTCATCCGTATCCTGGCGAATTTTCAGACAAATCTAGATCCTTCCACCAGTGTTACTTTATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTAAGCGAAGGTGAACAGTTTGATATAAGGCAAACCGTAGAAGAATTCAAGCATAATGTAAACGCGTACACTGCATGGAAACCTGGAATGGACATCCGCGTCTCTCATGTGAAACGTCGTAACATACCAAGCTTCATATTTCCTGGCGGCGTTCGACCTTCCGTTCCGTCTAAAGTAAACGGTGAGAATAGACGAAGTTCAAAATCAAGGGTTGCTGGTCAAAGTCAATCTGAAAAGTCTCAAGGAAGTAAAGCGGGTGTACTTGGAGCCGATGATGAAAGGAAGAGAAAGCGATTGGAGGATAATAATAACTCAAGGGTTTCAAAGTCCTCTGCATCTGTATCCCCTCCCAATAGGAATGTTCCTGAAGATAGAAATCCTTTTAGTGCTACTAGTTCTTGTTCTATGAAATTTGATGACTCTGAAGTCAATAGCATGGATGATCAAAAGATCGAGAAACCCTGTCTGAAATCGGTTGGTGAGATTCCTTCTGGTGTAAGTGTAACCAATGGATCAGCGCCGGATAACAAACAACTTGATGCTCCTGATACATCTAACACTAAAGAAGAAGAACGAATAGCCATCGAGCATATCATGTCTGGTCCGTATGAAGCGCATCAAGCTTTGACAGAAGAACCTGATGAGCTTCAACGAGATATGGGGTATAGAAATCAAGTCAATGATAATGGTGGAAGTGTGAAAAGCAACAACTTTGACTCTTCAAATCCAAATCTTGCGGTAGTGGAAGATCAAGTTATTTCTAAGGAGACAGTATGTTCAACTCATTCATTATCTAATGGAGGCTTGGAGGAGCTTGAGCCTGCTGAGCTGACAGCACCATTGTTTTGTGGGATTCCTGCTCCTGTACCACAGAAGAAGCCTCTTATCAGAAGCTATTTTCAGACCTCGCCCAAATTACAGAGGCTATTTGAGGTTGAACTTCACATCCTTAGGGAAAGCAGTGGAAAAAAGCACTTAAGAGACTTCAAAGCTTAA
Protein sequence

>Msa1421990

MGIPGMGNQSNGKQWLGITEPISLAGPTEEDVTKTRELEKYLQGAGLYESQQEAVGREEVLGRLDQIVKIWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPSFIFPGGVRPSVPSKVNGENRRSSKSRVAGQSQSEKSQGSKAGVLGADDERKRKRLEDNNNSRVSKSSASVSPPNRNVPEDRNPFSATSSCSMKFDDSEVNSMDDQKIEKPCLKSVGEIPSGVSVTNGSAPDNKQLDAPDTSNTKEEERIAIEHIMSGPYEAHQALTEEPDELQRDMGYRNQVNDNGGSVKSNNFDSSNPNLAVVEDQVISKETVCSTHSLSNGGLEELEPAELTAPLFCGIPAPVPQKKPLIRSYFQTSPKLQRLFEVELHILRESSGKKHLRDFKA*