Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370980 | XP_013470509.1 | 86.378 | 624 | 25 | 5 | 1 | 570 | 2 | 619 | 0.0 | 1096 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370980 | sp|Q5NYD9|SELO_AROAE | 45.833 | 552 | 208 | 10 | 81 | 570 | 1 | 523 | 3.47e-155 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370980 | A0A072VRY6 | 86.378 | 624 | 25 | 5 | 1 | 570 | 2 | 619 | 0.0 | 1096 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0226900 | Msa1370980 | -0.801691 | 7.990478e-49 | -8.615850e-47 |
| Msa0384370 | Msa1370980 | -0.847910 | 8.572039e-60 | -8.615850e-47 |
| Msa0430370 | Msa1370980 | -0.852877 | 3.460566e-61 | -8.615850e-47 |
| Msa0522700 | Msa1370980 | -0.853314 | 2.594313e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370980 | MtrunA17_Chr1g0213661 | 86.378 | 624 | 25 | 5 | 1 | 570 | 2 | 619 | 0.0 | 1096 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370980 | AT5G13030.1 | 70.547 | 567 | 110 | 4 | 60 | 570 | 68 | 633 | 0.0 | 826 |
Find 171 sgRNAs with CRISPR-Local
Find 483 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATATGGAACAAAATTTA+TGG | 0.150312 | tig0019144:+95071 | Msa1370980:intron |
| CACAGATAATACGAGCATTT+TGG | 0.166615 | tig0019144:+94770 | Msa1370980:CDS |
| CCTGGAAGGTCTGTGGTATT+TGG | 0.172714 | tig0019144:-94852 | None:intergenic |
| CTCCTATTTCTGCTGCTATT+TGG | 0.185352 | tig0019144:-96086 | None:intergenic |
| CTGGAAGGTCTGTGGTATTT+GGG | 0.211424 | tig0019144:-94851 | None:intergenic |
| GCTGCAGAAATCGGTGATTT+TGG | 0.217529 | tig0019144:+95909 | Msa1370980:CDS |
| ACTATTGATTATGGTCCATT+TGG | 0.245144 | tig0019144:+94798 | Msa1370980:CDS |
| TGGTAAACTTCTTACTAATA+TGG | 0.246433 | tig0019144:+95155 | Msa1370980:CDS |
| CTTGGAAGGGGATCGGTTCT+TGG | 0.250230 | tig0019144:-90542 | None:intergenic |
| GAAAAGAATATGAAAATAAA+TGG | 0.275587 | tig0019144:+90106 | None:intergenic |
| CCTGGAAATTGTTCGTGTTT+TGG | 0.279406 | tig0019144:+91636 | Msa1370980:CDS |
| TTGGGTCTTACTATTGATTA+TGG | 0.283796 | tig0019144:+94789 | Msa1370980:CDS |
| ATCTCGAGTAACCAACTTTC+CGG | 0.293228 | tig0019144:-91225 | None:intergenic |
| GTGGTATTTGGGGTAAATTT+AGG | 0.296888 | tig0019144:-94840 | None:intergenic |
| TAGTTCCTGAGAATATATTT+AGG | 0.297091 | tig0019144:-95864 | None:intergenic |
| TGCTATGGTGGACATCAATT+TGG | 0.303727 | tig0019144:+90975 | Msa1370980:CDS |
| TGCCACTACGAGGGTATAAA+TGG | 0.312094 | tig0019144:-90349 | None:intergenic |
| CTATTGATTATGGTCCATTT+GGG | 0.334050 | tig0019144:+94799 | Msa1370980:CDS |
| ATTGCACCCTGTTCTTCCTT+TGG | 0.341730 | tig0019144:-91538 | None:intergenic |
| ATAAAGTTGAAGATCTGAAT+TGG | 0.345823 | tig0019144:+90486 | Msa1370980:CDS |
| TTTAGGATTTACCATATTCA+TGG | 0.358201 | tig0019144:-95847 | None:intergenic |
| TGCATCCAATTGTGTCTAAC+TGG | 0.359223 | tig0019144:-96230 | None:intergenic |
| AGGTGGGAGCTACAGCTTAA+AGG | 0.363726 | tig0019144:+91068 | Msa1370980:CDS |
| TCTGGTGCATCACCTTTGCT+TGG | 0.365065 | tig0019144:+90933 | Msa1370980:CDS |
| GAGGAAGACCACCATGAATA+TGG | 0.366062 | tig0019144:+95836 | Msa1370980:CDS |
| TTCCAAATAGCAGCAGAAAT+AGG | 0.373963 | tig0019144:+96084 | Msa1370980:three_prime_UTR |
| CAGTGCTACGTAGCAGCATC+AGG | 0.376294 | tig0019144:+91132 | Msa1370980:CDS |
| CTCCTCCGACGCGGCGGCGG+CGG | 0.378507 | tig0019144:+90314 | Msa1370980:CDS |
| CAGGTCCTCATTACTACCTC+TGG | 0.386336 | tig0019144:-91617 | None:intergenic |
| CCAAAACACGAACAATTTCC+AGG | 0.391852 | tig0019144:-91636 | None:intergenic |
| TCGTAGGTTACTTAAATTAG+TGG | 0.396198 | tig0019144:+95938 | Msa1370980:CDS |
| TCAGCTGTTTATTATACTTA+GGG | 0.396482 | tig0019144:-95131 | None:intergenic |
| CCACCATAGCATTGAGCATA+AGG | 0.397985 | tig0019144:-90963 | None:intergenic |
| CAAATCTTCGGTCGGGTGGG+TGG | 0.400037 | tig0019144:-90188 | None:intergenic |
| TGGGAATCCAAAGGAAGAAC+AGG | 0.400394 | tig0019144:+91531 | Msa1370980:CDS |
| GGTATGTGGGCTGGCCAGTT+GGG | 0.400526 | tig0019144:+90996 | Msa1370980:CDS |
| GACGCGGCGGCGGCGGCATA+AGG | 0.401459 | tig0019144:+90321 | Msa1370980:CDS |
| CGTTGCCGACTTACTTGACT+TGG | 0.402304 | tig0019144:+90765 | Msa1370980:CDS |
| TGAATGACTCTCACCTCTCT+TGG | 0.408759 | tig0019144:-90560 | None:intergenic |
| ATATATGAAAATAAATATAT+CGG | 0.412028 | tig0019144:-96361 | None:intergenic |
| ATGGTAGAGCAATCACTCTT+GGG | 0.415418 | tig0019144:+91021 | Msa1370980:CDS |
| CCGCGTCGGAGGAGTGAGTT+TGG | 0.416628 | tig0019144:-90305 | None:intergenic |
| AGAGAAAGAGCACGGGTTGT+TGG | 0.417418 | tig0019144:-91194 | None:intergenic |
| CCACAGACCTTCCAGGTAGA+AGG | 0.424033 | tig0019144:+94859 | Msa1370980:CDS |
| CATCTCCAGTTAGACACAAT+TGG | 0.425261 | tig0019144:+96225 | Msa1370980:three_prime_UTR |
| CCAAATACCACAGACCTTCC+AGG | 0.429861 | tig0019144:+94852 | Msa1370980:CDS |
| TAAAGTTGAAGATCTGAATT+GGG | 0.432071 | tig0019144:+90487 | Msa1370980:CDS |
| ATCAGCTGTTTATTATACTT+AGG | 0.433343 | tig0019144:-95132 | None:intergenic |
| CCTGGTCGATATGCCCATGC+TGG | 0.435594 | tig0019144:-96011 | None:intergenic |
| CTGGTCGATATGCCCATGCT+GGG | 0.436470 | tig0019144:-96010 | None:intergenic |
| TGGTATGTGGGCTGGCCAGT+TGG | 0.438275 | tig0019144:+90995 | Msa1370980:CDS |
| AATCGATTTCATCAAATCTT+CGG | 0.444877 | tig0019144:-90200 | None:intergenic |
| TTCCATGATTGCTAGATGGC+AGG | 0.444903 | tig0019144:+94719 | Msa1370980:CDS |
| GAGAAGAAAAGGGGAAAATC+AGG | 0.445633 | tig0019144:-90912 | None:intergenic |
| GTGATGCACCAGAGAAGAAA+AGG | 0.448708 | tig0019144:-90923 | None:intergenic |
| CCCCTGCCATCTAGCAATCA+TGG | 0.449694 | tig0019144:-94721 | None:intergenic |
| TTACTCATGTTCTCAATATG+AGG | 0.454798 | tig0019144:-91685 | None:intergenic |
| TCCTCATGAGTTGCCTGCTT+AGG | 0.460380 | tig0019144:+96053 | Msa1370980:exon |
| GCAATTGATGCTGCAGAAAT+CGG | 0.460683 | tig0019144:+95900 | Msa1370980:CDS |
| CTGCTTCCATGATTGCTAGA+TGG | 0.469078 | tig0019144:+94715 | Msa1370980:CDS |
| GATGGTAGAGCAATCACTCT+TGG | 0.471143 | tig0019144:+91020 | Msa1370980:CDS |
| TCACTCCTCCGACGCGGCGG+CGG | 0.471853 | tig0019144:+90311 | Msa1370980:CDS |
| TCCATGATTGCTAGATGGCA+GGG | 0.472366 | tig0019144:+94720 | Msa1370980:CDS |
| ATGATCCACAACTCGTTGTA+TGG | 0.474055 | tig0019144:+90734 | Msa1370980:CDS |
| TTGCTCTACCATCACCCAAC+TGG | 0.476997 | tig0019144:-91010 | None:intergenic |
| AGCTACAGCTTAAAGGTGCT+GGG | 0.478291 | tig0019144:+91075 | Msa1370980:CDS |
| GAGCTACAGCTTAAAGGTGC+TGG | 0.480131 | tig0019144:+91074 | Msa1370980:CDS |
| ATTCCTGGCTGCTCATCAAA+AGG | 0.480253 | tig0019144:-95966 | None:intergenic |
| CTGCAGCATCAATTGCAGTC+TGG | 0.482061 | tig0019144:-95893 | None:intergenic |
| TCATCAAATCTTCGGTCGGG+TGG | 0.483287 | tig0019144:-90192 | None:intergenic |
| TGGAATACGCCTACCTAAGC+AGG | 0.488254 | tig0019144:-96066 | None:intergenic |
| GTGAAGCAATGCATCACCTT+GGG | 0.497196 | tig0019144:+91168 | Msa1370980:CDS |
| ACCAACCTGACATTGGTTTG+TGG | 0.499642 | tig0019144:+94895 | Msa1370980:CDS |
| AAATCTTCGGTCGGGTGGGT+GGG | 0.500878 | tig0019144:-90187 | None:intergenic |
| TAAATCCTAAATATATTCTC+AGG | 0.504170 | tig0019144:+95859 | Msa1370980:CDS |
| TGGGCTGGCCAGTTGGGTGA+TGG | 0.505887 | tig0019144:+91002 | Msa1370980:CDS |
| AGCAGCAGAAATAGGAGAGA+AGG | 0.506113 | tig0019144:+96092 | Msa1370980:three_prime_UTR |
| TACCCTCGTAGTGGCATCGT+TGG | 0.507958 | tig0019144:+90356 | Msa1370980:CDS |
| CACCTCTCTTGGAAGGGGAT+CGG | 0.508748 | tig0019144:-90549 | None:intergenic |
| TGCCGCCGCCGCCGCGTCGG+AGG | 0.510079 | tig0019144:-90316 | None:intergenic |
| ATTTCATCAAATCTTCGGTC+GGG | 0.515225 | tig0019144:-90195 | None:intergenic |
| TCTTGTCACCACCGGAAAGT+TGG | 0.519286 | tig0019144:+91214 | Msa1370980:CDS |
| CCATGATTGCTAGATGGCAG+GGG | 0.520403 | tig0019144:+94721 | Msa1370980:CDS |
| AATGATGGATTCAGCAGAGA+AGG | 0.523353 | tig0019144:+90385 | Msa1370980:CDS |
| TTGTACTAGTATAGATGAGT+TGG | 0.526466 | tig0019144:+96183 | Msa1370980:three_prime_UTR |
| CAAAGAGGCTAACTATGCAT+TGG | 0.528156 | tig0019144:+94968 | Msa1370980:CDS |
| CCATCGGCAAAGCGACTGTA+AGG | 0.528526 | tig0019144:-91104 | None:intergenic |
| CCTTACAGTCGCTTTGCCGA+TGG | 0.528989 | tig0019144:+91104 | Msa1370980:CDS |
| TTATGCCGCCGCCGCCGCGT+CGG | 0.530443 | tig0019144:-90319 | None:intergenic |
| AGATTCCACAAACCAATGTC+AGG | 0.532230 | tig0019144:-94900 | None:intergenic |
| GACTCTCACCTCTCTTGGAA+GGG | 0.532280 | tig0019144:-90555 | None:intergenic |
| CAGAGGTAGTAATGAGGACC+TGG | 0.533335 | tig0019144:+91618 | Msa1370980:CDS |
| GTGGACATCAATTTGGTATG+TGG | 0.534249 | tig0019144:+90982 | Msa1370980:CDS |
| AAGTATAATAAACAGCTGAT+TGG | 0.534474 | tig0019144:+95135 | Msa1370980:CDS |
| CATGAGTTGCCTGCTTAGGT+AGG | 0.535805 | tig0019144:+96057 | Msa1370980:exon |
| CATCGTTGGATGCAGAATGA+TGG | 0.539465 | tig0019144:+90370 | Msa1370980:CDS |
| TGACTCTCACCTCTCTTGGA+AGG | 0.541187 | tig0019144:-90556 | None:intergenic |
| GCTCTTTCTCTTGTCACCAC+CGG | 0.542597 | tig0019144:+91206 | Msa1370980:CDS |
| TTGCCTTATGCTCAATGCTA+TGG | 0.543945 | tig0019144:+90960 | Msa1370980:CDS |
| CTTACATCAAACAAGTATGC+AGG | 0.545376 | tig0019144:+91760 | Msa1370980:CDS |
| CAATTGTGTCTAACTGGAGA+TGG | 0.550260 | tig0019144:-96224 | None:intergenic |
| CATCAATTTGGTATGTGGGC+TGG | 0.554848 | tig0019144:+90987 | Msa1370980:CDS |
| TGATGCACCAGAGAAGAAAA+GGG | 0.555586 | tig0019144:-90922 | None:intergenic |
| TACTCAATTCTAACTCTCAA+AGG | 0.557576 | tig0019144:+91048 | Msa1370980:CDS |
| GAGAGCTTATCTTTCAGCAC+GGG | 0.557997 | tig0019144:+91712 | Msa1370980:CDS |
| CCAGCATGGGCATATCGACC+AGG | 0.558346 | tig0019144:+96011 | Msa1370980:CDS |
| GCTGTTTATTATACTTAGGG+AGG | 0.564163 | tig0019144:-95128 | None:intergenic |
| GATTTCATCAAATCTTCGGT+CGG | 0.565098 | tig0019144:-90196 | None:intergenic |
| TCCACAAACCAATGTCAGGT+TGG | 0.565880 | tig0019144:-94896 | None:intergenic |
| CATCAAATCTTCGGTCGGGT+GGG | 0.566844 | tig0019144:-90191 | None:intergenic |
| TCAATTCTAACTCTCAAAGG+TGG | 0.568353 | tig0019144:+91051 | Msa1370980:CDS |
| TGGTCGATATGCCCATGCTG+GGG | 0.570038 | tig0019144:-96009 | None:intergenic |
| GTTTCTTCTTCTGATGAACA+AGG | 0.571299 | tig0019144:-90460 | None:intergenic |
| CAGACGAGGGAAAGAAGTAC+AGG | 0.572241 | tig0019144:-90270 | None:intergenic |
| TTTGCAAACCAACCTGACAT+TGG | 0.573221 | tig0019144:+94888 | Msa1370980:CDS |
| ACTCTCACCTCTCTTGGAAG+GGG | 0.575231 | tig0019144:-90554 | None:intergenic |
| CATGCATAGAAGTTCTCTCA+TGG | 0.576519 | tig0019144:-96315 | None:intergenic |
| TGTTCTCAATATGAGGAAAG+TGG | 0.577108 | tig0019144:-91678 | None:intergenic |
| TAAGGCAACGCTCCAAGCAA+AGG | 0.579997 | tig0019144:-90945 | None:intergenic |
| TACCTCTGGAGGCATGTAGT+TGG | 0.581249 | tig0019144:-91603 | None:intergenic |
| AACCGATCCCCTTCCAAGAG+AGG | 0.583369 | tig0019144:+90547 | Msa1370980:CDS |
| AACAGTACCTTCTACCTGGA+AGG | 0.587812 | tig0019144:-94866 | None:intergenic |
| GCAAAACAGTACCTTCTACC+TGG | 0.590125 | tig0019144:-94870 | None:intergenic |
| CATGATTGCTAGATGGCAGG+GGG | 0.594293 | tig0019144:+94722 | Msa1370980:CDS |
| AGGCTAACTATGCATTGGAA+AGG | 0.594786 | tig0019144:+94973 | Msa1370980:CDS |
| AAGTTGAAGATTCAGAAACT+AGG | 0.595584 | tig0019144:+96122 | Msa1370980:three_prime_UTR |
| TGGACATCAATTTGGTATGT+GGG | 0.600111 | tig0019144:+90983 | Msa1370980:CDS |
| CAATTCTAACTCTCAAAGGT+GGG | 0.600171 | tig0019144:+91052 | Msa1370980:CDS |
| ATGATGGATTCAGCAGAGAA+GGG | 0.602810 | tig0019144:+90386 | Msa1370980:CDS |
| CACGGGTTGTTGGAATCCCA+AGG | 0.603470 | tig0019144:-91184 | None:intergenic |
| AGTGAAGCAATGCATCACCT+TGG | 0.603760 | tig0019144:+91167 | Msa1370980:CDS |
| ATTATCCAAGTCAAGTAAGT+CGG | 0.605674 | tig0019144:-90770 | None:intergenic |
| CAAGTCAAGTAAGTCGGCAA+CGG | 0.606848 | tig0019144:-90764 | None:intergenic |
| TCAGACCATACAACGAGTTG+TGG | 0.608864 | tig0019144:-90739 | None:intergenic |
| CAAGAAAGCATGCATACACC+TGG | 0.609213 | tig0019144:-96029 | None:intergenic |
| TGGAAGGTCTGTGGTATTTG+GGG | 0.613085 | tig0019144:-94850 | None:intergenic |
| TGGTGACAAGAGAAAGAGCA+CGG | 0.617950 | tig0019144:-91202 | None:intergenic |
| CCTTATGCTCAATGCTATGG+TGG | 0.618664 | tig0019144:+90963 | Msa1370980:CDS |
| ACGTAGCACTGCAAGACCAT+CGG | 0.621214 | tig0019144:-91120 | None:intergenic |
| GATGCATTGCTTCACTGCAA+AGG | 0.621681 | tig0019144:-91160 | None:intergenic |
| GGGATCGGTTCTTGGATCAG+AGG | 0.623339 | tig0019144:-90534 | None:intergenic |
| CCTTCTACCTGGAAGGTCTG+TGG | 0.624629 | tig0019144:-94859 | None:intergenic |
| GGATCGGTTCTTGGATCAGA+GGG | 0.629476 | tig0019144:-90533 | None:intergenic |
| TCATTTGATAAATGACAAAG+AGG | 0.633053 | tig0019144:+94953 | Msa1370980:CDS |
| TGAGAGCTTATCTTTCAGCA+CGG | 0.634202 | tig0019144:+91711 | Msa1370980:CDS |
| ACCTAAGCAGGCAACTCATG+AGG | 0.634942 | tig0019144:-96054 | None:intergenic |
| TGAAGAAGATCATTCTGTCG+TGG | 0.640885 | tig0019144:+91735 | Msa1370980:CDS |
| TTCCATTTATACCCTCGTAG+TGG | 0.642070 | tig0019144:+90347 | Msa1370980:CDS |
| GGTCGATATGCCCATGCTGG+GGG | 0.646118 | tig0019144:-96008 | None:intergenic |
| TGGTAGAGCAATCACTCTTG+GGG | 0.646632 | tig0019144:+91022 | Msa1370980:CDS |
| AGGATTTACCATATTCATGG+TGG | 0.646641 | tig0019144:-95844 | None:intergenic |
| TGAGTTACAGAGTCAAGCAA+CGG | 0.647458 | tig0019144:-90419 | None:intergenic |
| GGATACAACGACAACAGACG+AGG | 0.648594 | tig0019144:-90284 | None:intergenic |
| GTGGCATTTCTGATGATCAG+AGG | 0.648909 | tig0019144:+95817 | Msa1370980:CDS |
| AGTGCTACGTAGCAGCATCA+GGG | 0.657407 | tig0019144:+91133 | Msa1370980:CDS |
| GTATTCTATATCAGCATGGG+CGG | 0.663034 | tig0019144:+94674 | Msa1370980:intron |
| GGTGACAAGAGAAAGAGCAC+GGG | 0.663895 | tig0019144:-91201 | None:intergenic |
| TGCCTCCAGAGGTAGTAATG+AGG | 0.666249 | tig0019144:+91612 | Msa1370980:CDS |
| AACTCACTCCTCCGACGCGG+CGG | 0.675677 | tig0019144:+90308 | Msa1370980:CDS |
| GGATCATCTACTGCAACTGA+TGG | 0.679409 | tig0019144:-90718 | None:intergenic |
| GTCCTCATTACTACCTCTGG+AGG | 0.687126 | tig0019144:-91614 | None:intergenic |
| CATCCAACGATGCCACTACG+AGG | 0.688834 | tig0019144:-90359 | None:intergenic |
| GATGCACCAGAGAAGAAAAG+GGG | 0.694066 | tig0019144:-90921 | None:intergenic |
| ATCCAACGATGCCACTACGA+GGG | 0.699641 | tig0019144:-90358 | None:intergenic |
| CACATGCAGTGGGAATCCAA+AGG | 0.701489 | tig0019144:+91522 | Msa1370980:intron |
| TCGAGTAACCAACTTTCCGG+TGG | 0.702215 | tig0019144:-91222 | None:intergenic |
| GATACAACGACAACAGACGA+GGG | 0.702568 | tig0019144:-90283 | None:intergenic |
| TACCAACTACATGCCTCCAG+AGG | 0.702592 | tig0019144:+91601 | Msa1370980:CDS |
| GGGAATCCAAAGGAAGAACA+GGG | 0.708027 | tig0019144:+91532 | Msa1370980:CDS |
| AGAGGGTAAGTCTCTCACAA+AGG | 0.708435 | tig0019144:-90516 | None:intergenic |
| CCAAACTCACTCCTCCGACG+CGG | 0.739207 | tig0019144:+90305 | Msa1370980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACTACTATTTTTTTTTA+AGG | - | tig0019144:92855-92874 | None:intergenic | 10.0% |
| !!! | TTTAGAATTAAATTTATTTG+TGG | + | tig0019144:93075-93094 | Msa1370980:intron | 10.0% |
| !!! | TCTTAATTTTTTAGTTATCT+GGG | - | tig0019144:92060-92079 | None:intergenic | 15.0% |
| !!! | TTCTTAATTTTTTAGTTATC+TGG | - | tig0019144:92061-92080 | None:intergenic | 15.0% |
| !!! | TGGTTTTTTTCTTAAATAAA+AGG | - | tig0019144:92816-92835 | None:intergenic | 15.0% |
| !!! | AATATGCTATTGTTTTTTTA+TGG | - | tig0019144:92888-92907 | None:intergenic | 15.0% |
| !! | AAACTAATAGTAGTAATATA+AGG | + | tig0019144:92984-93003 | Msa1370980:intron | 15.0% |
| !!! | TAGTATTTTTTTTATTAGCA+TGG | + | tig0019144:93049-93068 | Msa1370980:intron | 15.0% |
| !!! | AATAATTCTTAATTTTCAAG+TGG | + | tig0019144:95395-95414 | Msa1370980:intron | 15.0% |
| !! | TATTAAAAAGAAGAGAAAGA+TGG | + | tig0019144:90232-90251 | Msa1370980:exon | 20.0% |
| !!! | TAATAATTTAATTTGCTTGC+AGG | + | tig0019144:90666-90685 | Msa1370980:intron | 20.0% |
| !!! | GTAAAATAATTCTTTTAGGA+GGG | + | tig0019144:91782-91801 | Msa1370980:intron | 20.0% |
| !!! | TAAAATAATTCTTTTAGGAG+GGG | + | tig0019144:91783-91802 | Msa1370980:intron | 20.0% |
| !! | AAGGAAAAAAAAACTACTAT+TGG | - | tig0019144:92836-92855 | None:intergenic | 20.0% |
| !!! | CATGAATTTTGTAATGTTTA+AGG | + | tig0019144:93022-93041 | Msa1370980:intron | 20.0% |
| !! | TATGTTACTAATCTCTAATT+AGG | - | tig0019144:93218-93237 | None:intergenic | 20.0% |
| !!! | TAGTGAAACTTTTTTTATCT+TGG | + | tig0019144:93474-93493 | Msa1370980:intron | 20.0% |
| !!! | TTATTTTCTGCTTAATTGTT+TGG | + | tig0019144:93596-93615 | Msa1370980:intron | 20.0% |
| !! | CAATTTAAGAAATTACTAAC+TGG | - | tig0019144:94336-94355 | None:intergenic | 20.0% |
| !! | GTCACTAGTAAAATAATAAA+TGG | - | tig0019144:94550-94569 | None:intergenic | 20.0% |
| !!! | TTCTGTTATCTTCATTTTTA+TGG | + | tig0019144:94574-94593 | Msa1370980:intron | 20.0% |
| !!! | TCTGTTATCTTCATTTTTAT+GGG | + | tig0019144:94575-94594 | Msa1370980:intron | 20.0% |
| !!! | AAATCCTTTGTTCTTTTTAA+TGG | + | tig0019144:94652-94671 | Msa1370980:intron | 20.0% |
| !! | AATACCATTAAAAAGAACAA+AGG | - | tig0019144:94659-94678 | None:intergenic | 20.0% |
| !! | AAATCAACAATTTGTGAAAA+GGG | - | tig0019144:95666-95685 | None:intergenic | 20.0% |
| !! | TAAATCCTAAATATATTCTC+AGG | + | tig0019144:95859-95878 | Msa1370980:CDS | 20.0% |
| !! | AATCGATTTCATCAAATCTT+CGG | - | tig0019144:90203-90222 | None:intergenic | 25.0% |
| ! | ATAAAGTTGAAGATCTGAAT+TGG | + | tig0019144:90486-90505 | Msa1370980:CDS | 25.0% |
| ! | TAAAGTTGAAGATCTGAATT+GGG | + | tig0019144:90487-90506 | Msa1370980:CDS | 25.0% |
| ! | TACTTGTTTGTTTGTTTGTT+TGG | - | tig0019144:91432-91451 | None:intergenic | 25.0% |
| !! | GCAGGTAAAATAATTCTTTT+AGG | + | tig0019144:91778-91797 | Msa1370980:intron | 25.0% |
| !! | GGTAAAATAATTCTTTTAGG+AGG | + | tig0019144:91781-91800 | Msa1370980:intron | 25.0% |
| !! | ACTGAATAAACACTTTTGAT+TGG | + | tig0019144:91857-91876 | Msa1370980:intron | 25.0% |
| !! | GATTGGTTATTTCACTTATT+TGG | + | tig0019144:91874-91893 | Msa1370980:intron | 25.0% |
| ! | AAGAATGAATGAGGAAATTA+GGG | - | tig0019144:91931-91950 | None:intergenic | 25.0% |
| !!! | ATTTTAGTTTGCATTAAGCT+CGG | - | tig0019144:92010-92029 | None:intergenic | 25.0% |
| !! | AAAAGGTTTCAAGTGAATAA+TGG | - | tig0019144:92476-92495 | None:intergenic | 25.0% |
| !!! | TTCACTTGAAACCTTTTTTT+AGG | + | tig0019144:92479-92498 | Msa1370980:intron | 25.0% |
| !!! | TCACTTGAAACCTTTTTTTA+GGG | + | tig0019144:92480-92499 | Msa1370980:intron | 25.0% |
| ! | TTTGTTAGTGAAGATTTATG+TGG | + | tig0019144:92704-92723 | Msa1370980:intron | 25.0% |
| ! | TTGTTAGTGAAGATTTATGT+GGG | + | tig0019144:92705-92724 | Msa1370980:intron | 25.0% |
| ! | CTTAAATAAAAGGTCAAAAG+AGG | - | tig0019144:92806-92825 | None:intergenic | 25.0% |
| ! | TTAGTTTATTACTCAAGTAG+TGG | - | tig0019144:92971-92990 | None:intergenic | 25.0% |
| ! | AGAACATTTATGCTTATATG+CGG | - | tig0019144:93283-93302 | None:intergenic | 25.0% |
| ! | GCATAAATGTTCTAATTGTA+AGG | + | tig0019144:93290-93309 | Msa1370980:intron | 25.0% |
| !!! | AAACTTTTTTTATCTTGGAG+CGG | + | tig0019144:93479-93498 | Msa1370980:intron | 25.0% |
| ! | ATCATATCATAGTATGATGA+AGG | - | tig0019144:93536-93555 | None:intergenic | 25.0% |
| ! | AAACCAAACACTGAAATATA+AGG | - | tig0019144:93720-93739 | None:intergenic | 25.0% |
| !! | TTGTGTATGATTTTGTAATG+TGG | + | tig0019144:94396-94415 | Msa1370980:intron | 25.0% |
| !!! | TTTGGTATTTTTGAAGTGAT+TGG | - | tig0019144:94451-94470 | None:intergenic | 25.0% |
| ! | TCATTTGATAAATGACAAAG+AGG | + | tig0019144:94953-94972 | Msa1370980:CDS | 25.0% |
| !! | TGAATTTTTCTCCTATAAAG+AGG | - | tig0019144:95032-95051 | None:intergenic | 25.0% |
| ! | CAGATATGGAACAAAATTTA+TGG | + | tig0019144:95071-95090 | Msa1370980:intron | 25.0% |
| ! | TCAGCTGTTTATTATACTTA+GGG | - | tig0019144:95134-95153 | None:intergenic | 25.0% |
| ! | ATCAGCTGTTTATTATACTT+AGG | - | tig0019144:95135-95154 | None:intergenic | 25.0% |
| ! | AAGTATAATAAACAGCTGAT+TGG | + | tig0019144:95135-95154 | Msa1370980:CDS | 25.0% |
| ! | TGGTAAACTTCTTACTAATA+TGG | + | tig0019144:95155-95174 | Msa1370980:CDS | 25.0% |
| ! | CAATTATACCTCGTATATAT+AGG | - | tig0019144:95337-95356 | None:intergenic | 25.0% |
| !!! | TAATTTTCAAGTGGCATAAT+CGG | + | tig0019144:95404-95423 | Msa1370980:intron | 25.0% |
| !!! | ATACCTTTTGAAATTTTGCT+TGG | + | tig0019144:95594-95613 | Msa1370980:intron | 25.0% |
| !!! | TTTTGAAATTTTGCTTGGTT+GGG | + | tig0019144:95599-95618 | Msa1370980:intron | 25.0% |
| ! | CAAATCAACAATTTGTGAAA+AGG | - | tig0019144:95667-95686 | None:intergenic | 25.0% |
| !! | TTTAGGATTTACCATATTCA+TGG | - | tig0019144:95850-95869 | None:intergenic | 25.0% |
| ! | TAGTTCCTGAGAATATATTT+AGG | - | tig0019144:95867-95886 | None:intergenic | 25.0% |
| ATTATCCAAGTCAAGTAAGT+CGG | - | tig0019144:90773-90792 | None:intergenic | 30.0% | |
| !! | TCTTTGAAATCTGAAATGGA+GGG | - | tig0019144:90892-90911 | None:intergenic | 30.0% |
| TACTCAATTCTAACTCTCAA+AGG | + | tig0019144:91048-91067 | Msa1370980:CDS | 30.0% | |
| ! | TTGTTTGTTTGGTGAAGTAA+TGG | - | tig0019144:91421-91440 | None:intergenic | 30.0% |
| TTACTCATGTTCTCAATATG+AGG | - | tig0019144:91688-91707 | None:intergenic | 30.0% | |
| CAAGAATGAATGAGGAAATT+AGG | - | tig0019144:91932-91951 | None:intergenic | 30.0% | |
| !!! | TTTTAGTTTGCATTAAGCTC+GGG | - | tig0019144:92009-92028 | None:intergenic | 30.0% |
| AATCCGTCATTCATAACATT+GGG | - | tig0019144:92136-92155 | None:intergenic | 30.0% | |
| TAATCCGTCATTCATAACAT+TGG | - | tig0019144:92137-92156 | None:intergenic | 30.0% | |
| TTGTTAAATAGCAATCGTGA+CGG | - | tig0019144:92286-92305 | None:intergenic | 30.0% | |
| !! | ACGATTTTGACCCTAAAAAA+AGG | - | tig0019144:92493-92512 | None:intergenic | 30.0% |
| ATGAAAGGAGATTGTTTATG+CGG | + | tig0019144:92648-92667 | Msa1370980:intron | 30.0% | |
| ! | TTTTAAGCCCATTATACTCT+CGG | - | tig0019144:92750-92769 | None:intergenic | 30.0% |
| ! | CTTTTATTACTTTCACTGCA+TGG | + | tig0019144:92780-92799 | Msa1370980:intron | 30.0% |
| GAGATTAGTAACATAACTGT+AGG | + | tig0019144:93223-93242 | Msa1370980:intron | 30.0% | |
| TTAGTAACATAACTGTAGGA+CGG | + | tig0019144:93227-93246 | Msa1370980:intron | 30.0% | |
| TCAACACTAATGACAAAAAC+AGG | - | tig0019144:93648-93667 | None:intergenic | 30.0% | |
| !! | TGTTTTTGTCATTAGTGTTG+AGG | + | tig0019144:93647-93666 | Msa1370980:intron | 30.0% |
| TACCTTTATATGTGAAGAGT+TGG | + | tig0019144:94050-94069 | Msa1370980:intron | 30.0% | |
| ACCTTTATATGTGAAGAGTT+GGG | + | tig0019144:94051-94070 | Msa1370980:intron | 30.0% | |
| ! | AAAAATAAGATGGACTTGGT+GGG | - | tig0019144:94160-94179 | None:intergenic | 30.0% |
| ! | TAAAAATAAGATGGACTTGG+TGG | - | tig0019144:94161-94180 | None:intergenic | 30.0% |
| ! | CTGTAAAAATAAGATGGACT+TGG | - | tig0019144:94164-94183 | None:intergenic | 30.0% |
| GGACAACTGTAAAAATAAGA+TGG | - | tig0019144:94170-94189 | None:intergenic | 30.0% | |
| TATCCAACACTAAGAATAAC+TGG | - | tig0019144:94236-94255 | None:intergenic | 30.0% | |
| ! | GTTATTCTTAGTGTTGGATA+CGG | + | tig0019144:94236-94255 | Msa1370980:intron | 30.0% |
| ! | TTATTCTTAGTGTTGGATAC+GGG | + | tig0019144:94237-94256 | Msa1370980:intron | 30.0% |
| AATTACTAACTGGACCATAT+AGG | - | tig0019144:94326-94345 | None:intergenic | 30.0% | |
| !! | CTTTTTGAAAGTAGTGAATG+AGG | + | tig0019144:94366-94385 | Msa1370980:intron | 30.0% |
| TAACTACATAAGACAGAGTT+TGG | - | tig0019144:94469-94488 | None:intergenic | 30.0% | |
| AATGGTATTCTATATCAGCA+TGG | + | tig0019144:94670-94689 | Msa1370980:intron | 30.0% | |
| ATGGTATTCTATATCAGCAT+GGG | + | tig0019144:94671-94690 | Msa1370980:intron | 30.0% | |
| ! | ACAGATAATACGAGCATTTT+GGG | + | tig0019144:94771-94790 | Msa1370980:CDS | 30.0% |
| ! | TTGGGTCTTACTATTGATTA+TGG | + | tig0019144:94789-94808 | Msa1370980:CDS | 30.0% |
| ! | ACTATTGATTATGGTCCATT+TGG | + | tig0019144:94798-94817 | Msa1370980:CDS | 30.0% |
| ! | CTATTGATTATGGTCCATTT+GGG | + | tig0019144:94799-94818 | Msa1370980:CDS | 30.0% |
| TAGGAGAAAAATTCACCTTA+TGG | + | tig0019144:95037-95056 | Msa1370980:intron | 30.0% | |
| AGAAAAATTCACCTTATGGT+TGG | + | tig0019144:95041-95060 | Msa1370980:intron | 30.0% | |
| GATATAATGACCAAAAAGCT+TGG | + | tig0019144:95105-95124 | Msa1370980:CDS | 30.0% | |
| CACACTCTCAAATATTAAAG+CGG | + | tig0019144:95212-95231 | Msa1370980:intron | 30.0% | |
| !! | TCTAATAGCACTGACTTTAA+TGG | - | tig0019144:95270-95289 | None:intergenic | 30.0% |
| ! | AAGTCAGTGCTATTAGATAT+TGG | + | tig0019144:95273-95292 | Msa1370980:intron | 30.0% |
| GTTGAAAACCTATATATACG+AGG | + | tig0019144:95326-95345 | Msa1370980:intron | 30.0% | |
| ! | ATTATTTTCTACAAGTGCCT+TGG | - | tig0019144:95381-95400 | None:intergenic | 30.0% |
| !!! | AATCGGTGTCATAAAGTTTT+TGG | + | tig0019144:95421-95440 | Msa1370980:intron | 30.0% |
| TTGAAGATGCATACTATCAT+TGG | + | tig0019144:95472-95491 | Msa1370980:intron | 30.0% | |
| CAACCAAGCAAAATTTCAAA+AGG | - | tig0019144:95600-95619 | None:intergenic | 30.0% | |
| !!! | CTTTTGAAATTTTGCTTGGT+TGG | + | tig0019144:95598-95617 | Msa1370980:intron | 30.0% |
| ACAATTTGTGAAAAGGGAAA+AGG | - | tig0019144:95660-95679 | None:intergenic | 30.0% | |
| TAAATCAATTGTGACCAAGA+TGG | + | tig0019144:95740-95759 | Msa1370980:intron | 30.0% | |
| TCGTAGGTTACTTAAATTAG+TGG | + | tig0019144:95938-95957 | Msa1370980:CDS | 30.0% | |
| AAGTTGAAGATTCAGAAACT+AGG | + | tig0019144:96122-96141 | Msa1370980:three_prime_UTR | 30.0% | |
| TTGTACTAGTATAGATGAGT+TGG | + | tig0019144:96183-96202 | Msa1370980:three_prime_UTR | 30.0% | |
| ATTTCATCAAATCTTCGGTC+GGG | - | tig0019144:90198-90217 | None:intergenic | 35.0% | |
| GATTTCATCAAATCTTCGGT+CGG | - | tig0019144:90199-90218 | None:intergenic | 35.0% | |
| GTTTCTTCTTCTGATGAACA+AGG | - | tig0019144:90463-90482 | None:intergenic | 35.0% | |
| !! | GTCTTTGAAATCTGAAATGG+AGG | - | tig0019144:90893-90912 | None:intergenic | 35.0% |
| !! | CAGGTCTTTGAAATCTGAAA+TGG | - | tig0019144:90896-90915 | None:intergenic | 35.0% |
| TGGACATCAATTTGGTATGT+GGG | + | tig0019144:90983-91002 | Msa1370980:CDS | 35.0% | |
| TCAATTCTAACTCTCAAAGG+TGG | + | tig0019144:91051-91070 | Msa1370980:CDS | 35.0% | |
| CAATTCTAACTCTCAAAGGT+GGG | + | tig0019144:91052-91071 | Msa1370980:CDS | 35.0% | |
| TTGTGACACATAGTAGGAAA+AGG | - | tig0019144:91280-91299 | None:intergenic | 35.0% | |
| TGTAAGTTGTGACACATAGT+AGG | - | tig0019144:91286-91305 | None:intergenic | 35.0% | |
| ! | GTAATGGCTAAGTTCTAGTA+TGG | - | tig0019144:91405-91424 | None:intergenic | 35.0% |
| TGTTAATATCACACATGCAG+TGG | + | tig0019144:91511-91530 | Msa1370980:intron | 35.0% | |
| GTTAATATCACACATGCAGT+GGG | + | tig0019144:91512-91531 | Msa1370980:intron | 35.0% | |
| ! | CTCAATCTTTTCTGCGTTTT+GGG | + | tig0019144:91575-91594 | Msa1370980:CDS | 35.0% |
| TGTTCTCAATATGAGGAAAG+TGG | - | tig0019144:91681-91700 | None:intergenic | 35.0% | |
| CTTACATCAAACAAGTATGC+AGG | + | tig0019144:91760-91779 | Msa1370980:CDS | 35.0% | |
| CTGACTGATATTTAAGCTGA+AGG | - | tig0019144:91901-91920 | None:intergenic | 35.0% | |
| ! | AATGAGGAAATTAGGGCATT+AGG | - | tig0019144:91924-91943 | None:intergenic | 35.0% |
| TACACAGACAAGAATGAATG+AGG | - | tig0019144:91940-91959 | None:intergenic | 35.0% | |
| TGAATTCAGTAGCTGAAACA+CGG | + | tig0019144:91971-91990 | Msa1370980:intron | 35.0% | |
| TACTAGTACTACCATTGTCT+AGG | - | tig0019144:92113-92132 | None:intergenic | 35.0% | |
| GTACCCAATGTTATGAATGA+CGG | + | tig0019144:92130-92149 | Msa1370980:intron | 35.0% | |
| !! | AATGACGGATTAGCAGTTTA+TGG | + | tig0019144:92145-92164 | Msa1370980:intron | 35.0% |
| TAACCGTGAAAAAGGATGAA+GGG | - | tig0019144:92560-92579 | None:intergenic | 35.0% | |
| TTAACCGTGAAAAAGGATGA+AGG | - | tig0019144:92561-92580 | None:intergenic | 35.0% | |
| TCTTCTCTTAACCGTGAAAA+AGG | - | tig0019144:92568-92587 | None:intergenic | 35.0% | |
| ACTGAGAAGAAGTGAATGAA+AGG | + | tig0019144:92633-92652 | Msa1370980:intron | 35.0% | |
| ! | ACTCTCGGGTTGTTTAAATA+TGG | - | tig0019144:92735-92754 | None:intergenic | 35.0% |
| ! | TAAACAACCCGAGAGTATAA+TGG | + | tig0019144:92739-92758 | Msa1370980:intron | 35.0% |
| ! | AAACAACCCGAGAGTATAAT+GGG | + | tig0019144:92740-92759 | Msa1370980:intron | 35.0% |
| TTTAAGCCCATTATACTCTC+GGG | - | tig0019144:92749-92768 | None:intergenic | 35.0% | |
| CTAATTAGGCTCACAAAATC+AGG | - | tig0019144:93204-93223 | None:intergenic | 35.0% | |
| TAACTGTAGGACGGAAAATA+TGG | + | tig0019144:93236-93255 | Msa1370980:intron | 35.0% | |
| ! | GTTTCACTAGTTTGTGTGTT+GGG | - | tig0019144:93463-93482 | None:intergenic | 35.0% |
| ! | AGTTTCACTAGTTTGTGTGT+TGG | - | tig0019144:93464-93483 | None:intergenic | 35.0% |
| AATTGTTTGGTATCTCCTTC+TGG | + | tig0019144:93609-93628 | Msa1370980:intron | 35.0% | |
| ATTGTTTGGTATCTCCTTCT+GGG | + | tig0019144:93610-93629 | Msa1370980:intron | 35.0% | |
| ACACTAATGACAAAAACAGG+AGG | - | tig0019144:93645-93664 | None:intergenic | 35.0% | |
| GCACCTTATATTTCAGTGTT+TGG | + | tig0019144:93714-93733 | Msa1370980:intron | 35.0% | |
| !! | ATCTGCTGTCTGAGTTTTAA+AGG | - | tig0019144:93869-93888 | None:intergenic | 35.0% |
| AAATCGGTGTGTTTAGACTA+TGG | + | tig0019144:94016-94035 | Msa1370980:intron | 35.0% | |
| CCTTTATATGTGAAGAGTTG+GGG | + | tig0019144:94052-94071 | Msa1370980:intron | 35.0% | |
| ACTTAATGCAGAGATACACT+TGG | - | tig0019144:94191-94210 | None:intergenic | 35.0% | |
| ! | TCACTACTTTCAAAAAGTGC+TGG | - | tig0019144:94363-94382 | None:intergenic | 35.0% |
| ! | GATTTTGTAATGTGGCAGTA+AGG | + | tig0019144:94404-94423 | Msa1370980:intron | 35.0% |
| TTGCGTAAGTTATAATCGAG+AGG | - | tig0019144:94513-94532 | None:intergenic | 35.0% | |
| CTCGATTATAACTTACGCAA+TGG | + | tig0019144:94513-94532 | Msa1370980:intron | 35.0% | |
| ! | CACAGATAATACGAGCATTT+TGG | + | tig0019144:94770-94789 | Msa1370980:CDS | 35.0% |
| !! | TTATGGTCCATTTGGGTTTT+TGG | + | tig0019144:94806-94825 | Msa1370980:CDS | 35.0% |
| ! | AAAGCATCCAAAAACCCAAA+TGG | - | tig0019144:94816-94835 | None:intergenic | 35.0% |
| ! | GTGGTATTTGGGGTAAATTT+AGG | - | tig0019144:94843-94862 | None:intergenic | 35.0% |
| TTTCTCCTATAAAGAGGAGT+GGG | - | tig0019144:95026-95045 | None:intergenic | 35.0% | |
| ! | TTTTCTCCTATAAAGAGGAG+TGG | - | tig0019144:95027-95046 | None:intergenic | 35.0% |
| GCTGTTTATTATACTTAGGG+AGG | - | tig0019144:95131-95150 | None:intergenic | 35.0% | |
| ! | TGTTTTTCTTTAGTCGTCCA+AGG | + | tig0019144:95361-95380 | Msa1370980:intron | 35.0% |
| CTCATAGTTTAACTAGCTGA+AGG | + | tig0019144:95528-95547 | Msa1370980:intron | 35.0% | |
| !! | CTGAAGGCTTTGAATATTAC+TGG | + | tig0019144:95544-95563 | Msa1370980:intron | 35.0% |
| ACAGACACTGATATATCACA+TGG | - | tig0019144:95636-95655 | None:intergenic | 35.0% | |
| CTGCAACTTATGCATCAAAA+GGG | - | tig0019144:95702-95721 | None:intergenic | 35.0% | |
| ACTGCAACTTATGCATCAAA+AGG | - | tig0019144:95703-95722 | None:intergenic | 35.0% | |
| ! | ATAGAGATGTCAAAAGCACA+GGG | - | tig0019144:95766-95785 | None:intergenic | 35.0% |
| TGACATCTCTATCATTGCTT+TGG | + | tig0019144:95774-95793 | Msa1370980:intron | 35.0% | |
| GACATCTCTATCATTGCTTT+GGG | + | tig0019144:95775-95794 | Msa1370980:intron | 35.0% | |
| AGGATTTACCATATTCATGG+TGG | - | tig0019144:95847-95866 | None:intergenic | 35.0% | |
| TTCCAAATAGCAGCAGAAAT+AGG | + | tig0019144:96084-96103 | Msa1370980:three_prime_UTR | 35.0% | |
| TTCCATTTATACCCTCGTAG+TGG | + | tig0019144:90347-90366 | Msa1370980:CDS | 40.0% | |
| !! | AATGATGGATTCAGCAGAGA+AGG | + | tig0019144:90385-90404 | Msa1370980:CDS | 40.0% |
| !! | ATGATGGATTCAGCAGAGAA+GGG | + | tig0019144:90386-90405 | Msa1370980:CDS | 40.0% |
| TGAGTTACAGAGTCAAGCAA+CGG | - | tig0019144:90422-90441 | None:intergenic | 40.0% | |
| ATGATCCACAACTCGTTGTA+TGG | + | tig0019144:90734-90753 | Msa1370980:CDS | 40.0% | |
| GAGAAGAAAAGGGGAAAATC+AGG | - | tig0019144:90915-90934 | None:intergenic | 40.0% | |
| ! | GATTTTCCCCTTTTCTTCTC+TGG | + | tig0019144:90915-90934 | Msa1370980:CDS | 40.0% |
| TGATGCACCAGAGAAGAAAA+GGG | - | tig0019144:90925-90944 | None:intergenic | 40.0% | |
| TTGCCTTATGCTCAATGCTA+TGG | + | tig0019144:90960-90979 | Msa1370980:CDS | 40.0% | |
| !! | TGCTATGGTGGACATCAATT+TGG | + | tig0019144:90975-90994 | Msa1370980:CDS | 40.0% |
| GTGGACATCAATTTGGTATG+TGG | + | tig0019144:90982-91001 | Msa1370980:CDS | 40.0% | |
| ATGGTAGAGCAATCACTCTT+GGG | + | tig0019144:91021-91040 | Msa1370980:CDS | 40.0% | |
| ATCTCGAGTAACCAACTTTC+CGG | - | tig0019144:91228-91247 | None:intergenic | 40.0% | |
| ! | TGGCTAAGTTCTAGTATGGA+TGG | - | tig0019144:91401-91420 | None:intergenic | 40.0% |
| ! | GCTCAATCTTTTCTGCGTTT+TGG | + | tig0019144:91574-91593 | Msa1370980:CDS | 40.0% |
| CCAAAACACGAACAATTTCC+AGG | - | tig0019144:91639-91658 | None:intergenic | 40.0% | |
| ! | CCTGGAAATTGTTCGTGTTT+TGG | + | tig0019144:91636-91655 | Msa1370980:CDS | 40.0% |
| TGAGAGCTTATCTTTCAGCA+CGG | + | tig0019144:91711-91730 | Msa1370980:CDS | 40.0% | |
| TGAAGAAGATCATTCTGTCG+TGG | + | tig0019144:91735-91754 | Msa1370980:CDS | 40.0% | |
| ! | TGACAATGTTTGGGGTGAAA+AGG | - | tig0019144:91812-91831 | None:intergenic | 40.0% |
| AGAGTGAGTGACAATGTTTG+GGG | - | tig0019144:91820-91839 | None:intergenic | 40.0% | |
| GAGAGTGAGTGACAATGTTT+GGG | - | tig0019144:91821-91840 | None:intergenic | 40.0% | |
| TGAGAGTGAGTGACAATGTT+TGG | - | tig0019144:91822-91841 | None:intergenic | 40.0% | |
| GAATTCAGTAGCTGAAACAC+GGG | + | tig0019144:91972-91991 | Msa1370980:intron | 40.0% | |
| AAAATCCCTTGCCTAGACAA+TGG | + | tig0019144:92099-92118 | Msa1370980:intron | 40.0% | |
| TACTACCATTGTCTAGGCAA+GGG | - | tig0019144:92107-92126 | None:intergenic | 40.0% | |
| GATTAGCAGTTTATGGCAGA+GGG | + | tig0019144:92152-92171 | Msa1370980:intron | 40.0% | |
| ACAATTCAGCCATATAAGCG+TGG | + | tig0019144:92177-92196 | Msa1370980:intron | 40.0% | |
| CAATTCAGCCATATAAGCGT+GGG | + | tig0019144:92178-92197 | Msa1370980:intron | 40.0% | |
| ATGCTCTCATAAATTGCCCA+TGG | + | tig0019144:92232-92251 | Msa1370980:intron | 40.0% | |
| TGCTCTCATAAATTGCCCAT+GGG | + | tig0019144:92233-92252 | Msa1370980:intron | 40.0% | |
| ! | CATTTTGTGTCAATCCCCAT+GGG | - | tig0019144:92251-92270 | None:intergenic | 40.0% |
| ! | ACATTTTGTGTCAATCCCCA+TGG | - | tig0019144:92252-92271 | None:intergenic | 40.0% |
| ! | AAATAGCAATCGTGACGGAA+TGG | - | tig0019144:92281-92300 | None:intergenic | 40.0% |
| !! | CGATTGCTATTTAACAACGC+TGG | + | tig0019144:92289-92308 | Msa1370980:intron | 40.0% |
| ! | GGTAGTTCTGTTGTCAATAG+CGG | + | tig0019144:92310-92329 | Msa1370980:intron | 40.0% |
| TAGGGTCAAAATCGTACGAT+CGG | + | tig0019144:92498-92517 | Msa1370980:intron | 40.0% | |
| !! | GTACCCTTCATCCTTTTTCA+CGG | + | tig0019144:92554-92573 | Msa1370980:intron | 40.0% |
| AAAGGAGATTGTTTATGCGG+CGG | + | tig0019144:92651-92670 | Msa1370980:intron | 40.0% | |
| TCCATGCACAAAATTAGGTC+TGG | + | tig0019144:92675-92694 | Msa1370980:intron | 40.0% | |
| CCATGCACAAAATTAGGTCT+GGG | + | tig0019144:92676-92695 | Msa1370980:intron | 40.0% | |
| CATGCACAAAATTAGGTCTG+GGG | + | tig0019144:92677-92696 | Msa1370980:intron | 40.0% | |
| TAGTGAAGATTTATGTGGGC+TGG | + | tig0019144:92709-92728 | Msa1370980:intron | 40.0% | |
| AATAACCACATCCAAGCACA+AGG | - | tig0019144:93383-93402 | None:intergenic | 40.0% | |
| ! | GCGGTCAAGTTTATGTTTTC+TGG | + | tig0019144:93498-93517 | Msa1370980:intron | 40.0% |
| AGCCAAATGACCCTTCTTTA+CGG | - | tig0019144:93846-93865 | None:intergenic | 40.0% | |
| GGAAAAGTAACTGAATGTCG+TGG | - | tig0019144:93939-93958 | None:intergenic | 40.0% | |
| TTTCCTGCCTAAGACTATGA+AGG | + | tig0019144:93954-93973 | Msa1370980:intron | 40.0% | |
| TATGGAGCCTTCATAGTCTT+AGG | - | tig0019144:93964-93983 | None:intergenic | 40.0% | |
| AAGACTATGAAGGCTCCATA+AGG | + | tig0019144:93964-93983 | Msa1370980:intron | 40.0% | |
| AGACTATGAAGGCTCCATAA+GGG | + | tig0019144:93965-93984 | Msa1370980:intron | 40.0% | |
| ! | TTTCTCAGTCTCCCTGTTTT+GGG | - | tig0019144:93999-94018 | None:intergenic | 40.0% |
| ! | ATTTCTCAGTCTCCCTGTTT+TGG | - | tig0019144:94000-94019 | None:intergenic | 40.0% |
| AAACAGGGAGACTGAGAAAT+CGG | + | tig0019144:94000-94019 | Msa1370980:intron | 40.0% | |
| CCCCAACTCTTCACATATAA+AGG | - | tig0019144:94055-94074 | None:intergenic | 40.0% | |
| TTATATGTGAAGAGTTGGGG+TGG | + | tig0019144:94055-94074 | Msa1370980:intron | 40.0% | |
| TCCAGTCAATTAAGTTAGCC+AGG | + | tig0019144:94210-94229 | Msa1370980:intron | 40.0% | |
| AACACTAAGAATAACTGGCC+TGG | - | tig0019144:94231-94250 | None:intergenic | 40.0% | |
| AGGCCAGTTATTCTTAGTGT+TGG | + | tig0019144:94230-94249 | Msa1370980:intron | 40.0% | |
| GTATTCTATATCAGCATGGG+CGG | + | tig0019144:94674-94693 | Msa1370980:intron | 40.0% | |
| TTTGCAAACCAACCTGACAT+TGG | + | tig0019144:94888-94907 | Msa1370980:CDS | 40.0% | |
| AGATTCCACAAACCAATGTC+AGG | - | tig0019144:94903-94922 | None:intergenic | 40.0% | |
| CAAAGAGGCTAACTATGCAT+TGG | + | tig0019144:94968-94987 | Msa1370980:CDS | 40.0% | |
| AGGCTAACTATGCATTGGAA+AGG | + | tig0019144:94973-94992 | Msa1370980:CDS | 40.0% | |
| TTCTCCTATAAAGAGGAGTG+GGG | - | tig0019144:95025-95044 | None:intergenic | 40.0% | |
| ! | TCTGAAACAGACCAACCATA+AGG | - | tig0019144:95055-95074 | None:intergenic | 40.0% |
| !! | TGGTTGGTCTGTTTCAGATA+TGG | + | tig0019144:95057-95076 | Msa1370980:intron | 40.0% |
| GGCACTAACAATTCATCATC+TGG | - | tig0019144:95249-95268 | None:intergenic | 40.0% | |
| TCCAAGTAGTGACATGGATT+TGG | + | tig0019144:95571-95590 | Msa1370980:intron | 40.0% | |
| TCCAAATCCATGTCACTACT+TGG | - | tig0019144:95575-95594 | None:intergenic | 40.0% | |
| ! | GATAGAGATGTCAAAAGCAC+AGG | - | tig0019144:95767-95786 | None:intergenic | 40.0% |
| ! | TTTTTGCAGCTCTCTACAAG+TGG | + | tig0019144:95798-95817 | Msa1370980:intron | 40.0% |
| GCAATTGATGCTGCAGAAAT+CGG | + | tig0019144:95900-95919 | Msa1370980:CDS | 40.0% | |
| !! | GTGATTTTGGAGAAGTTCGT+AGG | + | tig0019144:95922-95941 | Msa1370980:CDS | 40.0% |
| !! | CTCCTATTTCTGCTGCTATT+TGG | - | tig0019144:96089-96108 | None:intergenic | 40.0% |
| CAATTGTGTCTAACTGGAGA+TGG | - | tig0019144:96227-96246 | None:intergenic | 40.0% | |
| CATCTCCAGTTAGACACAAT+TGG | + | tig0019144:96225-96244 | Msa1370980:three_prime_UTR | 40.0% | |
| TGCATCCAATTGTGTCTAAC+TGG | - | tig0019144:96233-96252 | None:intergenic | 40.0% | |
| CATGCATAGAAGTTCTCTCA+TGG | - | tig0019144:96318-96337 | None:intergenic | 40.0% | |
| GATACAACGACAACAGACGA+GGG | - | tig0019144:90286-90305 | None:intergenic | 45.0% | |
| ! | TGCCACTACGAGGGTATAAA+TGG | - | tig0019144:90352-90371 | None:intergenic | 45.0% |
| CATCGTTGGATGCAGAATGA+TGG | + | tig0019144:90370-90389 | Msa1370980:CDS | 45.0% | |
| AGAGGGTAAGTCTCTCACAA+AGG | - | tig0019144:90519-90538 | None:intergenic | 45.0% | |
| TGAATGACTCTCACCTCTCT+TGG | - | tig0019144:90563-90582 | None:intergenic | 45.0% | |
| GGATCATCTACTGCAACTGA+TGG | - | tig0019144:90721-90740 | None:intergenic | 45.0% | |
| TCAGACCATACAACGAGTTG+TGG | - | tig0019144:90742-90761 | None:intergenic | 45.0% | |
| CAAGTCAAGTAAGTCGGCAA+CGG | - | tig0019144:90767-90786 | None:intergenic | 45.0% | |
| GATGCACCAGAGAAGAAAAG+GGG | - | tig0019144:90924-90943 | None:intergenic | 45.0% | |
| GTGATGCACCAGAGAAGAAA+AGG | - | tig0019144:90926-90945 | None:intergenic | 45.0% | |
| ! | CCACCATAGCATTGAGCATA+AGG | - | tig0019144:90966-90985 | None:intergenic | 45.0% |
| CCTTATGCTCAATGCTATGG+TGG | + | tig0019144:90963-90982 | Msa1370980:CDS | 45.0% | |
| CATCAATTTGGTATGTGGGC+TGG | + | tig0019144:90987-91006 | Msa1370980:CDS | 45.0% | |
| GATGGTAGAGCAATCACTCT+TGG | + | tig0019144:91020-91039 | Msa1370980:CDS | 45.0% | |
| TGGTAGAGCAATCACTCTTG+GGG | + | tig0019144:91022-91041 | Msa1370980:CDS | 45.0% | |
| !! | AGCTACAGCTTAAAGGTGCT+GGG | + | tig0019144:91075-91094 | Msa1370980:CDS | 45.0% |
| GATGCATTGCTTCACTGCAA+AGG | - | tig0019144:91163-91182 | None:intergenic | 45.0% | |
| AGTGAAGCAATGCATCACCT+TGG | + | tig0019144:91167-91186 | Msa1370980:CDS | 45.0% | |
| GTGAAGCAATGCATCACCTT+GGG | + | tig0019144:91168-91187 | Msa1370980:CDS | 45.0% | |
| TGGTGACAAGAGAAAGAGCA+CGG | - | tig0019144:91205-91224 | None:intergenic | 45.0% | |
| TGGGAATCCAAAGGAAGAAC+AGG | + | tig0019144:91531-91550 | Msa1370980:CDS | 45.0% | |
| GGGAATCCAAAGGAAGAACA+GGG | + | tig0019144:91532-91551 | Msa1370980:CDS | 45.0% | |
| ATTGCACCCTGTTCTTCCTT+TGG | - | tig0019144:91541-91560 | None:intergenic | 45.0% | |
| GAGAGCTTATCTTTCAGCAC+GGG | + | tig0019144:91712-91731 | Msa1370980:CDS | 45.0% | |
| GCATTAAGCTCGGGATTACT+TGG | - | tig0019144:92000-92019 | None:intergenic | 45.0% | |
| GTACTACCATTGTCTAGGCA+AGG | - | tig0019144:92108-92127 | None:intergenic | 45.0% | |
| ! | GGATTAGCAGTTTATGGCAG+AGG | + | tig0019144:92151-92170 | Msa1370980:intron | 45.0% |
| GTTGCAATCCCACGCTTATA+TGG | - | tig0019144:92189-92208 | None:intergenic | 45.0% | |
| GCTCTCATAAATTGCCCATG+GGG | + | tig0019144:92234-92253 | Msa1370980:intron | 45.0% | |
| !!! | GCGTCGCGTTTTGTCATTTT+TGG | - | tig0019144:92367-92386 | None:intergenic | 45.0% |
| TTTGGAGAAAGTGGGTGAAG+CGG | + | tig0019144:92406-92425 | Msa1370980:intron | 45.0% | |
| ! | CCCAGACCTAATTTTGTGCA+TGG | - | tig0019144:92679-92698 | None:intergenic | 45.0% |
| TGTATAAACCTACCGTGTGC+AGG | + | tig0019144:93565-93584 | Msa1370980:intron | 45.0% | |
| ATAACAGCCATACCTGCACA+CGG | - | tig0019144:93580-93599 | None:intergenic | 45.0% | |
| TATCTCCTTCTGGGTCTTCA+CGG | + | tig0019144:93619-93638 | Msa1370980:intron | 45.0% | |
| AGGCTATACAGCTTCCAACT+TGG | + | tig0019144:93667-93686 | Msa1370980:intron | 45.0% | |
| GGCTATACAGCTTCCAACTT+GGG | + | tig0019144:93668-93687 | Msa1370980:intron | 45.0% | |
| TATTCCCAGTCAACCCAAGT+TGG | - | tig0019144:93684-93703 | None:intergenic | 45.0% | |
| ATACTCACGTGCCGTAAAGA+AGG | + | tig0019144:93832-93851 | Msa1370980:intron | 45.0% | |
| TACTCACGTGCCGTAAAGAA+GGG | + | tig0019144:93833-93852 | Msa1370980:intron | 45.0% | |
| TGCCGTAAAGAAGGGTCATT+TGG | + | tig0019144:93841-93860 | Msa1370980:intron | 45.0% | |
| ! | TTTGGGCGTTGTTTCCCTTA+TGG | - | tig0019144:93982-94001 | None:intergenic | 45.0% |
| TCTGCACTACCATGCAACAA+GGG | - | tig0019144:94089-94108 | None:intergenic | 45.0% | |
| ATCTGCACTACCATGCAACA+AGG | - | tig0019144:94090-94109 | None:intergenic | 45.0% | |
| GAATCATCTCTGTCATGGTC+AGG | + | tig0019144:94118-94137 | Msa1370980:intron | 45.0% | |
| GCCTGGCTAACTTAATTGAC+TGG | - | tig0019144:94214-94233 | None:intergenic | 45.0% | |
| CTTGGTCAAGTAGGCCTATA+TGG | + | tig0019144:94309-94328 | Msa1370980:intron | 45.0% | |
| CTGCTTCCATGATTGCTAGA+TGG | + | tig0019144:94715-94734 | Msa1370980:CDS | 45.0% | |
| TTCCATGATTGCTAGATGGC+AGG | + | tig0019144:94719-94738 | Msa1370980:CDS | 45.0% | |
| TCCATGATTGCTAGATGGCA+GGG | + | tig0019144:94720-94739 | Msa1370980:CDS | 45.0% | |
| TGGAAGGTCTGTGGTATTTG+GGG | - | tig0019144:94853-94872 | None:intergenic | 45.0% | |
| CTGGAAGGTCTGTGGTATTT+GGG | - | tig0019144:94854-94873 | None:intergenic | 45.0% | |
| AACAGTACCTTCTACCTGGA+AGG | - | tig0019144:94869-94888 | None:intergenic | 45.0% | |
| GCAAAACAGTACCTTCTACC+TGG | - | tig0019144:94873-94892 | None:intergenic | 45.0% | |
| !! | ACCAACCTGACATTGGTTTG+TGG | + | tig0019144:94895-94914 | Msa1370980:CDS | 45.0% |
| TCCACAAACCAATGTCAGGT+TGG | - | tig0019144:94899-94918 | None:intergenic | 45.0% | |
| TCTCCTATAAAGAGGAGTGG+GGG | - | tig0019144:95024-95043 | None:intergenic | 45.0% | |
| ! | GTAAAGAAGCGTGGACAAGT+TGG | + | tig0019144:95304-95323 | Msa1370980:intron | 45.0% |
| GGTGTTTCCAAGTAGTGACA+TGG | + | tig0019144:95565-95584 | Msa1370980:intron | 45.0% | |
| GTGGCATTTCTGATGATCAG+AGG | + | tig0019144:95817-95836 | Msa1370980:CDS | 45.0% | |
| GAGGAAGACCACCATGAATA+TGG | + | tig0019144:95836-95855 | Msa1370980:CDS | 45.0% | |
| ! | GCTGCAGAAATCGGTGATTT+TGG | + | tig0019144:95909-95928 | Msa1370980:CDS | 45.0% |
| ATTCCTGGCTGCTCATCAAA+AGG | - | tig0019144:95969-95988 | None:intergenic | 45.0% | |
| ! | TTTTGATGAGCAGCCAGGAA+TGG | + | tig0019144:95968-95987 | Msa1370980:CDS | 45.0% |
| ! | CGAGCATACTTTTCCATTCC+TGG | - | tig0019144:95984-96003 | None:intergenic | 45.0% |
| ! | CAAGAAAGCATGCATACACC+TGG | - | tig0019144:96032-96051 | None:intergenic | 45.0% |
| AGCAGCAGAAATAGGAGAGA+AGG | + | tig0019144:96092-96111 | Msa1370980:three_prime_UTR | 45.0% | |
| !! | ATAATGATTATAAAAAATAA+TGG | + | tig0019144:92944-92963 | Msa1370980:intron | 5.0% |
| !! | ATATATGAAAATAAATATAT+CGG | - | tig0019144:96364-96383 | None:intergenic | 5.0% |
| !!! | TTATTTTCATATATAATAAT+TGG | + | tig0019144:96370-96389 | Msa1370980:three_prime_UTR | 5.0% |
| CATCAAATCTTCGGTCGGGT+GGG | - | tig0019144:90194-90213 | None:intergenic | 50.0% | |
| TCATCAAATCTTCGGTCGGG+TGG | - | tig0019144:90195-90214 | None:intergenic | 50.0% | |
| ! | CAGACGAGGGAAAGAAGTAC+AGG | - | tig0019144:90273-90292 | None:intergenic | 50.0% |
| GGATACAACGACAACAGACG+AGG | - | tig0019144:90287-90306 | None:intergenic | 50.0% | |
| ATCCAACGATGCCACTACGA+GGG | - | tig0019144:90361-90380 | None:intergenic | 50.0% | |
| ! | GGATCGGTTCTTGGATCAGA+GGG | - | tig0019144:90536-90555 | None:intergenic | 50.0% |
| ACTCTCACCTCTCTTGGAAG+GGG | - | tig0019144:90557-90576 | None:intergenic | 50.0% | |
| GACTCTCACCTCTCTTGGAA+GGG | - | tig0019144:90558-90577 | None:intergenic | 50.0% | |
| TGACTCTCACCTCTCTTGGA+AGG | - | tig0019144:90559-90578 | None:intergenic | 50.0% | |
| !! | CGTTGCCGACTTACTTGACT+TGG | + | tig0019144:90765-90784 | Msa1370980:CDS | 50.0% |
| TCTGGTGCATCACCTTTGCT+TGG | + | tig0019144:90933-90952 | Msa1370980:CDS | 50.0% | |
| TAAGGCAACGCTCCAAGCAA+AGG | - | tig0019144:90948-90967 | None:intergenic | 50.0% | |
| TTGCTCTACCATCACCCAAC+TGG | - | tig0019144:91013-91032 | None:intergenic | 50.0% | |
| AGGTGGGAGCTACAGCTTAA+AGG | + | tig0019144:91068-91087 | Msa1370980:CDS | 50.0% | |
| ! | GAGCTACAGCTTAAAGGTGC+TGG | + | tig0019144:91074-91093 | Msa1370980:CDS | 50.0% |
| ACGTAGCACTGCAAGACCAT+CGG | - | tig0019144:91123-91142 | None:intergenic | 50.0% | |
| AGTGCTACGTAGCAGCATCA+GGG | + | tig0019144:91133-91152 | Msa1370980:CDS | 50.0% | |
| ! | AGAGAAAGAGCACGGGTTGT+TGG | - | tig0019144:91197-91216 | None:intergenic | 50.0% |
| ! | GGTGACAAGAGAAAGAGCAC+GGG | - | tig0019144:91204-91223 | None:intergenic | 50.0% |
| GCTCTTTCTCTTGTCACCAC+CGG | + | tig0019144:91206-91225 | Msa1370980:CDS | 50.0% | |
| TCTTGTCACCACCGGAAAGT+TGG | + | tig0019144:91214-91233 | Msa1370980:CDS | 50.0% | |
| TCGAGTAACCAACTTTCCGG+TGG | - | tig0019144:91225-91244 | None:intergenic | 50.0% | |
| CACATGCAGTGGGAATCCAA+AGG | + | tig0019144:91522-91541 | Msa1370980:intron | 50.0% | |
| TACCAACTACATGCCTCCAG+AGG | + | tig0019144:91601-91620 | Msa1370980:CDS | 50.0% | |
| ! | TACCTCTGGAGGCATGTAGT+TGG | - | tig0019144:91606-91625 | None:intergenic | 50.0% |
| TGCCTCCAGAGGTAGTAATG+AGG | + | tig0019144:91612-91631 | Msa1370980:CDS | 50.0% | |
| GTCCTCATTACTACCTCTGG+AGG | - | tig0019144:91617-91636 | None:intergenic | 50.0% | |
| CAGGTCCTCATTACTACCTC+TGG | - | tig0019144:91620-91639 | None:intergenic | 50.0% | |
| CAGAGGTAGTAATGAGGACC+TGG | + | tig0019144:91618-91637 | Msa1370980:CDS | 50.0% | |
| !! | GAGAGCATCACCTGCCATTA+CGG | - | tig0019144:92220-92239 | None:intergenic | 50.0% |
| TTGTCAATAGCGGCTGCTAC+CGG | + | tig0019144:92320-92339 | Msa1370980:intron | 50.0% | |
| ! | TGGTCGCTTTGACCCGAATT+TGG | - | tig0019144:92456-92475 | None:intergenic | 50.0% |
| AATCGTACGATCGGAACAGC+TGG | + | tig0019144:92507-92526 | Msa1370980:intron | 50.0% | |
| CAGCTGGATCTGAGTTTACG+CGG | + | tig0019144:92523-92542 | Msa1370980:intron | 50.0% | |
| AGCTGGATCTGAGTTTACGC+GGG | + | tig0019144:92524-92543 | Msa1370980:intron | 50.0% | |
| GCGGCTCCATGCACAAAATT+AGG | + | tig0019144:92670-92689 | Msa1370980:intron | 50.0% | |
| ACCAGCGTCTGTTGTCAATG+CGG | - | tig0019144:93177-93196 | None:intergenic | 50.0% | |
| TTCCTTGCACACCTTGTGCT+TGG | + | tig0019144:93369-93388 | Msa1370980:intron | 50.0% | |
| ATCCAAGCACAAGGTGTGCA+AGG | - | tig0019144:93374-93393 | None:intergenic | 50.0% | |
| AAACCTACCGTGTGCAGGTA+TGG | + | tig0019144:93570-93589 | Msa1370980:intron | 50.0% | |
| !! | AGCTTCCAACTTGGGTTGAC+TGG | + | tig0019144:93676-93695 | Msa1370980:intron | 50.0% |
| !! | GCTTCCAACTTGGGTTGACT+GGG | + | tig0019144:93677-93696 | Msa1370980:intron | 50.0% |
| ! | GAGCCTTCATAGTCTTAGGC+AGG | - | tig0019144:93960-93979 | None:intergenic | 50.0% |
| AGGGAAACAACGCCCAAAAC+AGG | + | tig0019144:93984-94003 | Msa1370980:intron | 50.0% | |
| GGGAAACAACGCCCAAAACA+GGG | + | tig0019144:93985-94004 | Msa1370980:intron | 50.0% | |
| GCATTGTTCCCCTTGTTGCA+TGG | + | tig0019144:94077-94096 | Msa1370980:intron | 50.0% | |
| CTGCACTACCATGCAACAAG+GGG | - | tig0019144:94088-94107 | None:intergenic | 50.0% | |
| ! | AGTGTTGGATACGGGTAACC+TGG | + | tig0019144:94245-94264 | Msa1370980:intron | 50.0% |
| TTGGATACGGGTAACCTGGA+TGG | + | tig0019144:94249-94268 | Msa1370980:intron | 50.0% | |
| TGGATACGGGTAACCTGGAT+GGG | + | tig0019144:94250-94269 | Msa1370980:intron | 50.0% | |
| !! | TCGCAATAGGGTTGGTTTGG+TGG | + | tig0019144:94274-94293 | Msa1370980:intron | 50.0% |
| !! | AATAGGGTTGGTTTGGTGGC+AGG | + | tig0019144:94278-94297 | Msa1370980:intron | 50.0% |
| !! | TTGGTTTGGTGGCAGGATGT+TGG | + | tig0019144:94285-94304 | Msa1370980:intron | 50.0% |
| !! | TGGTTTGGTGGCAGGATGTT+GGG | + | tig0019144:94286-94305 | Msa1370980:intron | 50.0% |
| ! | GATGTTGGGCTTGGTCAAGT+AGG | + | tig0019144:94300-94319 | Msa1370980:intron | 50.0% |
| CCATGATTGCTAGATGGCAG+GGG | + | tig0019144:94721-94740 | Msa1370980:CDS | 50.0% | |
| CATGATTGCTAGATGGCAGG+GGG | + | tig0019144:94722-94741 | Msa1370980:CDS | 50.0% | |
| CCTGGAAGGTCTGTGGTATT+TGG | - | tig0019144:94855-94874 | None:intergenic | 50.0% | |
| CCAAATACCACAGACCTTCC+AGG | + | tig0019144:94852-94871 | Msa1370980:CDS | 50.0% | |
| CTATAAAGAGGAGTGGGGGA+AGG | - | tig0019144:95020-95039 | None:intergenic | 50.0% | |
| CTTCCCCCACTCCTCTTTAT+AGG | + | tig0019144:95018-95037 | Msa1370980:intron | 50.0% | |
| ! | CTTAGGGAGGCCAAGCTTTT+TGG | - | tig0019144:95118-95137 | None:intergenic | 50.0% |
| ! | GTCAAGAGCGTAAAGAAGCG+TGG | + | tig0019144:95295-95314 | Msa1370980:intron | 50.0% |
| ! | TCAAAAGCACAGGGCCATCT+TGG | - | tig0019144:95757-95776 | None:intergenic | 50.0% |
| CTGCAGCATCAATTGCAGTC+TGG | - | tig0019144:95896-95915 | None:intergenic | 50.0% | |
| ! | CATCCTTTTGATGAGCAGCC+AGG | + | tig0019144:95963-95982 | Msa1370980:CDS | 50.0% |
| TCCTCATGAGTTGCCTGCTT+AGG | + | tig0019144:96053-96072 | Msa1370980:exon | 50.0% | |
| ACCTAAGCAGGCAACTCATG+AGG | - | tig0019144:96057-96076 | None:intergenic | 50.0% | |
| CATGAGTTGCCTGCTTAGGT+AGG | + | tig0019144:96057-96076 | Msa1370980:exon | 50.0% | |
| TGGAATACGCCTACCTAAGC+AGG | - | tig0019144:96069-96088 | None:intergenic | 50.0% | |
| AAATCTTCGGTCGGGTGGGT+GGG | - | tig0019144:90190-90209 | None:intergenic | 55.0% | |
| TACCCTCGTAGTGGCATCGT+TGG | + | tig0019144:90356-90375 | Msa1370980:CDS | 55.0% | |
| CATCCAACGATGCCACTACG+AGG | - | tig0019144:90362-90381 | None:intergenic | 55.0% | |
| ! | GGGATCGGTTCTTGGATCAG+AGG | - | tig0019144:90537-90556 | None:intergenic | 55.0% |
| ! | CTTGGAAGGGGATCGGTTCT+TGG | - | tig0019144:90545-90564 | None:intergenic | 55.0% |
| AACCGATCCCCTTCCAAGAG+AGG | + | tig0019144:90547-90566 | Msa1370980:CDS | 55.0% | |
| CACCTCTCTTGGAAGGGGAT+CGG | - | tig0019144:90552-90571 | None:intergenic | 55.0% | |
| CCATCGGCAAAGCGACTGTA+AGG | - | tig0019144:91107-91126 | None:intergenic | 55.0% | |
| ! | CCTTACAGTCGCTTTGCCGA+TGG | + | tig0019144:91104-91123 | Msa1370980:CDS | 55.0% |
| CAGTGCTACGTAGCAGCATC+AGG | + | tig0019144:91132-91151 | Msa1370980:CDS | 55.0% | |
| ! | CACGGGTTGTTGGAATCCCA+AGG | - | tig0019144:91187-91206 | None:intergenic | 55.0% |
| AAGCGTGGGATTGCAACCTG+TGG | + | tig0019144:92192-92211 | Msa1370980:intron | 55.0% | |
| TGCAACCTGTGGCACCGTAA+TGG | + | tig0019144:92203-92222 | Msa1370980:intron | 55.0% | |
| ! | GCGGAGCGTTTGGAGAAAGT+GGG | + | tig0019144:92398-92417 | Msa1370980:intron | 55.0% |
| TGGGTGAAGCGGCCGATATT+CGG | + | tig0019144:92417-92436 | Msa1370980:intron | 55.0% | |
| CACCCTGCTCCACCGAATAT+CGG | - | tig0019144:92432-92451 | None:intergenic | 55.0% | |
| TGGAGCAGGGTGGCCAAATT+CGG | + | tig0019144:92440-92459 | Msa1370980:intron | 55.0% | |
| GGCCAACCCAAAAATTGGCG+CGG | - | tig0019144:93143-93162 | None:intergenic | 55.0% | |
| AGCGCGGCCAACCCAAAAAT+TGG | - | tig0019144:93148-93167 | None:intergenic | 55.0% | |
| GTCAATGCGGAAATGCAGCG+CGG | - | tig0019144:93164-93183 | None:intergenic | 55.0% | |
| ! | TCCGCATTGACAACAGACGC+TGG | + | tig0019144:93173-93192 | Msa1370980:intron | 55.0% |
| GCACACCTTGTGCTTGGATG+TGG | + | tig0019144:93375-93394 | Msa1370980:intron | 55.0% | |
| GGATACGGGTAACCTGGATG+GGG | + | tig0019144:94251-94270 | Msa1370980:intron | 55.0% | |
| AACCTGGATGGGGTCGCAAT+AGG | + | tig0019144:94261-94280 | Msa1370980:intron | 55.0% | |
| ACCTGGATGGGGTCGCAATA+GGG | + | tig0019144:94262-94281 | Msa1370980:intron | 55.0% | |
| !! | GGGTCGCAATAGGGTTGGTT+TGG | + | tig0019144:94271-94290 | Msa1370980:intron | 55.0% |
| CCCCTGCCATCTAGCAATCA+TGG | - | tig0019144:94724-94743 | None:intergenic | 55.0% | |
| ATTGCTAGATGGCAGGGGGT+TGG | + | tig0019144:94726-94745 | Msa1370980:CDS | 55.0% | |
| !! | CAGGGGGTTGGTTTCACTCA+TGG | + | tig0019144:94738-94757 | Msa1370980:CDS | 55.0% |
| CCTTCTACCTGGAAGGTCTG+TGG | - | tig0019144:94862-94881 | None:intergenic | 55.0% | |
| CCACAGACCTTCCAGGTAGA+AGG | + | tig0019144:94859-94878 | Msa1370980:CDS | 55.0% | |
| TGGTCGATATGCCCATGCTG+GGG | - | tig0019144:96012-96031 | None:intergenic | 55.0% | |
| CTGGTCGATATGCCCATGCT+GGG | - | tig0019144:96013-96032 | None:intergenic | 55.0% | |
| CAAATCTTCGGTCGGGTGGG+TGG | - | tig0019144:90191-90210 | None:intergenic | 60.0% | |
| CCAAACTCACTCCTCCGACG+CGG | + | tig0019144:90305-90324 | Msa1370980:CDS | 60.0% | |
| !! | TGGTATGTGGGCTGGCCAGT+TGG | + | tig0019144:90995-91014 | Msa1370980:CDS | 60.0% |
| !! | GGTATGTGGGCTGGCCAGTT+GGG | + | tig0019144:90996-91015 | Msa1370980:CDS | 60.0% |
| ACCTGTGGCACCGTAATGGC+AGG | + | tig0019144:92207-92226 | Msa1370980:intron | 60.0% | |
| !! | ACCTGCCATTACGGTGCCAC+AGG | - | tig0019144:92211-92230 | None:intergenic | 60.0% |
| AAACGCGACGCAGCGCTACA+AGG | + | tig0019144:92376-92395 | Msa1370980:intron | 60.0% | |
| ! | GGCGGAGCGTTTGGAGAAAG+TGG | + | tig0019144:92397-92416 | Msa1370980:intron | 60.0% |
| GTGAAGCGGCCGATATTCGG+TGG | + | tig0019144:92420-92439 | Msa1370980:intron | 60.0% | |
| ! | GGCCGATATTCGGTGGAGCA+GGG | + | tig0019144:92427-92446 | Msa1370980:intron | 60.0% |
| ! | CGATATTCGGTGGAGCAGGG+TGG | + | tig0019144:92430-92449 | Msa1370980:intron | 60.0% |
| GGAGCAGGGTGGCCAAATTC+GGG | + | tig0019144:92441-92460 | Msa1370980:intron | 60.0% | |
| !!! | CGTAGCGGGCGCTATTTTGG+CGG | - | tig0019144:93106-93125 | None:intergenic | 60.0% |
| !!! | GTGCGTAGCGGGCGCTATTT+TGG | - | tig0019144:93109-93128 | None:intergenic | 60.0% |
| ACCCAAAAATTGGCGCGGCG+CGG | - | tig0019144:93138-93157 | None:intergenic | 60.0% | |
| !!! | CGCCGCGCCAATTTTTGGGT+TGG | + | tig0019144:93138-93157 | Msa1370980:intron | 60.0% |
| CAGCCATACCTGCACACGGT+AGG | - | tig0019144:93576-93595 | None:intergenic | 60.0% | |
| ACCCTATTGCGACCCCATCC+AGG | - | tig0019144:94266-94285 | None:intergenic | 60.0% | |
| GGATGGGGTCGCAATAGGGT+TGG | + | tig0019144:94266-94285 | Msa1370980:intron | 60.0% | |
| TGGTGGCAGGATGTTGGGCT+TGG | + | tig0019144:94291-94310 | Msa1370980:intron | 60.0% | |
| ATGCTCGCTTACCCCCAGCA+TGG | + | tig0019144:95997-96016 | Msa1370980:CDS | 60.0% | |
| TGCTCGCTTACCCCCAGCAT+GGG | + | tig0019144:95998-96017 | Msa1370980:CDS | 60.0% | |
| GGTCGATATGCCCATGCTGG+GGG | - | tig0019144:96011-96030 | None:intergenic | 60.0% | |
| CCTGGTCGATATGCCCATGC+TGG | - | tig0019144:96014-96033 | None:intergenic | 60.0% | |
| CCAGCATGGGCATATCGACC+AGG | + | tig0019144:96011-96030 | Msa1370980:CDS | 60.0% | |
| CCGCGTCGGAGGAGTGAGTT+TGG | - | tig0019144:90308-90327 | None:intergenic | 65.0% | |
| AACTCACTCCTCCGACGCGG+CGG | + | tig0019144:90308-90327 | Msa1370980:CDS | 65.0% | |
| !! | TGGGCTGGCCAGTTGGGTGA+TGG | + | tig0019144:91002-91021 | Msa1370980:CDS | 65.0% |
| ! | GCGCTACAAGGCGGAGCGTT+TGG | + | tig0019144:92388-92407 | Msa1370980:intron | 65.0% |
| ! | CGGCCGATATTCGGTGGAGC+AGG | + | tig0019144:92426-92445 | Msa1370980:intron | 65.0% |
| !!! | CGGGCGCTATTTTGGCGGTG+CGG | - | tig0019144:93101-93120 | None:intergenic | 65.0% |
| ! | TCCCGCGCCGCGCCAATTTT+TGG | + | tig0019144:93133-93152 | Msa1370980:intron | 65.0% |
| CCCAAAAATTGGCGCGGCGC+GGG | - | tig0019144:93137-93156 | None:intergenic | 65.0% | |
| ! | CCCGCGCCGCGCCAATTTTT+GGG | + | tig0019144:93134-93153 | Msa1370980:intron | 65.0% |
| GGAGGCCGTGAAGACCCAGA+AGG | - | tig0019144:93627-93646 | None:intergenic | 65.0% | |
| GGCTGCTACCGGCGCTATCG+TGG | + | tig0019144:92331-92350 | Msa1370980:intron | 70.0% | |
| CTACCGGCGCTATCGTGGCG+CGG | + | tig0019144:92336-92355 | Msa1370980:intron | 70.0% | |
| ACTCCGCGCCACGATAGCGC+CGG | - | tig0019144:92342-92361 | None:intergenic | 70.0% | |
| CGCGACGCAGCGCTACAAGG+CGG | + | tig0019144:92379-92398 | Msa1370980:intron | 70.0% | |
| AAATTGGCGCGGCGCGGGAG+CGG | - | tig0019144:93132-93151 | None:intergenic | 70.0% | |
| TCACTCCTCCGACGCGGCGG+CGG | + | tig0019144:90311-90330 | Msa1370980:CDS | 75.0% | |
| TTATGCCGCCGCCGCCGCGT+CGG | - | tig0019144:90322-90341 | None:intergenic | 75.0% | |
| GGCGCTATCGTGGCGCGGAG+TGG | + | tig0019144:92341-92360 | Msa1370980:intron | 75.0% | |
| AATTGGCGCGGCGCGGGAGC+GGG | - | tig0019144:93131-93150 | None:intergenic | 75.0% | |
| ! | GACGCGGCGGCGGCGGCATA+AGG | + | tig0019144:90321-90340 | Msa1370980:CDS | 80.0% |
| ! | CGCGGGAGCGGGTGCGTAGC+GGG | - | tig0019144:93120-93139 | None:intergenic | 80.0% |
| ! | GCGCGGGAGCGGGTGCGTAG+CGG | - | tig0019144:93121-93140 | None:intergenic | 80.0% |
| ! | CTCCTCCGACGCGGCGGCGG+CGG | + | tig0019144:90314-90333 | Msa1370980:CDS | 85.0% |
| ! | TGCCGCCGCCGCCGCGTCGG+AGG | - | tig0019144:90319-90338 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019144 | gene | 90117 | 96393 | 90117 | ID=Msa1370980;Name=Msa1370980 |
| tig0019144 | mRNA | 90117 | 96393 | 90117 | ID=Msa1370980-mRNA-1;Parent=Msa1370980;Name=Msa1370980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=134|0.83|0.85|1|1|1|7|332|570 |
| tig0019144 | exon | 90117 | 90568 | 90117 | ID=Msa1370980-mRNA-1:exon:1939;Parent=Msa1370980-mRNA-1 |
| tig0019144 | exon | 90688 | 90797 | 90688 | ID=Msa1370980-mRNA-1:exon:1940;Parent=Msa1370980-mRNA-1 |
| tig0019144 | exon | 90902 | 91258 | 90902 | ID=Msa1370980-mRNA-1:exon:1941;Parent=Msa1370980-mRNA-1 |
| tig0019144 | exon | 91531 | 91781 | 91531 | ID=Msa1370980-mRNA-1:exon:1942;Parent=Msa1370980-mRNA-1 |
| tig0019144 | exon | 94688 | 94994 | 94688 | ID=Msa1370980-mRNA-1:exon:1943;Parent=Msa1370980-mRNA-1 |
| tig0019144 | exon | 95074 | 95188 | 95074 | ID=Msa1370980-mRNA-1:exon:1944;Parent=Msa1370980-mRNA-1 |
| tig0019144 | exon | 95807 | 96393 | 95807 | ID=Msa1370980-mRNA-1:exon:1945;Parent=Msa1370980-mRNA-1 |
| tig0019144 | five_prime_UTR | 90117 | 90250 | 90117 | ID=Msa1370980-mRNA-1:five_prime_utr;Parent=Msa1370980-mRNA-1 |
| tig0019144 | CDS | 90251 | 90568 | 90251 | ID=Msa1370980-mRNA-1:cds;Parent=Msa1370980-mRNA-1 |
| tig0019144 | CDS | 90688 | 90797 | 90688 | ID=Msa1370980-mRNA-1:cds;Parent=Msa1370980-mRNA-1 |
| tig0019144 | CDS | 90902 | 91258 | 90902 | ID=Msa1370980-mRNA-1:cds;Parent=Msa1370980-mRNA-1 |
| tig0019144 | CDS | 91531 | 91781 | 91531 | ID=Msa1370980-mRNA-1:cds;Parent=Msa1370980-mRNA-1 |
| tig0019144 | CDS | 94688 | 94994 | 94688 | ID=Msa1370980-mRNA-1:cds;Parent=Msa1370980-mRNA-1 |
| tig0019144 | CDS | 95074 | 95188 | 95074 | ID=Msa1370980-mRNA-1:cds;Parent=Msa1370980-mRNA-1 |
| tig0019144 | CDS | 95807 | 96061 | 95807 | ID=Msa1370980-mRNA-1:cds;Parent=Msa1370980-mRNA-1 |
| tig0019144 | three_prime_UTR | 96062 | 96393 | 96062 | ID=Msa1370980-mRNA-1:three_prime_utr;Parent=Msa1370980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
