Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373150 | XP_003626259.1 | 96.767 | 433 | 14 | 0 | 1 | 433 | 1 | 433 | 0.0 | 848 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373150 | sp|Q3E6S8|DGP14_ARATH | 60.412 | 437 | 154 | 6 | 1 | 430 | 2 | 426 | 6.25e-180 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373150 | A2Q336 | 96.767 | 433 | 14 | 0 | 1 | 433 | 1 | 433 | 0.0 | 848 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0428150 | Msa1373150 | 0.828108 | 1.079737e-54 | -8.615850e-47 |
| Msa0462500 | Msa1373150 | 0.825359 | 4.894628e-54 | -8.615850e-47 |
| Msa1039370 | Msa1373150 | 0.873610 | 1.287088e-67 | -8.615850e-47 |
| Msa1165110 | Msa1373150 | 0.940278 | 3.067261e-100 | -8.615850e-47 |
| Msa0525900 | Msa1373150 | 0.946920 | 1.831914e-105 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373150 | MtrunA17_Chr7g0272621 | 96.767 | 433 | 14 | 0 | 1 | 433 | 1 | 433 | 0.0 | 848 |
| Msa1373150 | MtrunA17_Chr6g0450671 | 30.293 | 307 | 170 | 10 | 128 | 413 | 128 | 411 | 4.00e-32 | 126 |
| Msa1373150 | MtrunA17_Chr6g0453121 | 28.571 | 308 | 182 | 10 | 147 | 430 | 165 | 458 | 3.54e-30 | 121 |
| Msa1373150 | MtrunA17_Chr2g0285791 | 35.519 | 183 | 108 | 5 | 147 | 320 | 133 | 314 | 2.37e-22 | 97.1 |
| Msa1373150 | MtrunA17_Chr5g0426331 | 27.143 | 280 | 159 | 7 | 167 | 415 | 137 | 402 | 3.47e-19 | 89.4 |
| Msa1373150 | MtrunA17_Chr5g0426381 | 35.135 | 111 | 71 | 1 | 308 | 417 | 1 | 111 | 2.59e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373150 | AT5G27660.2 | 61.327 | 437 | 156 | 5 | 1 | 430 | 2 | 432 | 0.0 | 527 |
| Msa1373150 | AT5G27660.1 | 61.882 | 425 | 143 | 6 | 13 | 430 | 9 | 421 | 1.70e-180 | 510 |
| Msa1373150 | AT3G27925.1 | 31.193 | 327 | 178 | 11 | 128 | 429 | 135 | 439 | 9.02e-34 | 131 |
| Msa1373150 | AT3G27925.2 | 31.193 | 327 | 178 | 11 | 128 | 429 | 135 | 439 | 9.02e-34 | 131 |
| Msa1373150 | AT5G39830.1 | 29.545 | 308 | 179 | 10 | 147 | 430 | 155 | 448 | 4.45e-31 | 124 |
| Msa1373150 | AT5G39830.2 | 28.525 | 305 | 172 | 10 | 147 | 430 | 155 | 434 | 9.24e-27 | 112 |
| Msa1373150 | AT4G18370.1 | 36.458 | 192 | 110 | 6 | 147 | 328 | 131 | 320 | 2.07e-21 | 94.7 |
Find 150 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGAGATCCTCTCCATTT+AGG | 0.184232 | tig0019363:-115069 | None:intergenic |
| CGTTGAAGAGTGTAGAATTT+TGG | 0.246728 | tig0019363:+110097 | Msa1373150:five_prime_UTR |
| GTTGAGATCCTCTCCATTTA+GGG | 0.246868 | tig0019363:-115068 | None:intergenic |
| TTCATTCCCTAATGTCAATA+AGG | 0.269170 | tig0019363:+113446 | Msa1373150:CDS |
| TGTATGGCACAGGGAAATTC+TGG | 0.299439 | tig0019363:+112921 | Msa1373150:intron |
| TCCTTCTTCGGACATGTCTA+AGG | 0.309122 | tig0019363:+110848 | Msa1373150:CDS |
| ATTGGCTTTGTAGATTTCTA+TGG | 0.309418 | tig0019363:+111065 | Msa1373150:intron |
| TGGAGGGCCACTTGTCAATA+TGG | 0.315113 | tig0019363:+112941 | Msa1373150:CDS |
| TCAACGCCAAGGGCCCTAAA+TGG | 0.323892 | tig0019363:+115055 | Msa1373150:three_prime_UTR |
| CTAGGCTTCGTCCCGGGGAT+TGG | 0.328014 | tig0019363:+112497 | Msa1373150:CDS |
| TGACCGTAAAAGCAGTGATT+TGG | 0.333135 | tig0019363:+112746 | Msa1373150:CDS |
| TGCGACTTTAAGTGTGATTC+CGG | 0.337225 | tig0019363:+114795 | Msa1373150:CDS |
| AGAATGCCCTTATTGACATT+AGG | 0.346180 | tig0019363:-113453 | None:intergenic |
| ATCTATCATGAGTTATTTCC+TGG | 0.355463 | tig0019363:+110127 | Msa1373150:exon |
| GGGTCCCCTGGTGATCGTGC+TGG | 0.357975 | tig0019363:+114305 | Msa1373150:CDS |
| GAATGCCCTTATTGACATTA+GGG | 0.359755 | tig0019363:-113452 | None:intergenic |
| AAGCCATCTAAGGATACTTT+TGG | 0.364970 | tig0019363:+110900 | Msa1373150:CDS |
| GACCGTAAAAGCAGTGATTT+GGG | 0.371160 | tig0019363:+112747 | Msa1373150:CDS |
| GACATGTCTAAGGAAACTTC+TGG | 0.371904 | tig0019363:+110858 | Msa1373150:CDS |
| ATCTGTTTGTAAATACTCTC+TGG | 0.378364 | tig0019363:-112784 | None:intergenic |
| TGATGAATCAAAGCCATCTA+AGG | 0.379781 | tig0019363:+110890 | Msa1373150:CDS |
| AGCAGTGATTTGGGATTTAG+TGG | 0.380979 | tig0019363:+112756 | Msa1373150:CDS |
| ATGTGAACAAGTGGTATATT+TGG | 0.386975 | tig0019363:+114908 | Msa1373150:three_prime_UTR |
| GATGTTGTCATTGAATTTGA+TGG | 0.389841 | tig0019363:+114341 | Msa1373150:CDS |
| AAGGAGTGAACGGGAGGAAG+AGG | 0.389975 | tig0019363:-115033 | None:intergenic |
| AGTTAGCCCTGTTCCTTCTT+CGG | 0.392277 | tig0019363:+110836 | Msa1373150:CDS |
| TTGAACACAAACCTTCCCTT+TGG | 0.396372 | tig0019363:-111195 | None:intergenic |
| AAATGATGGTGGACAAAGTT+GGG | 0.397529 | tig0019363:+114731 | Msa1373150:CDS |
| TAGGCTTCGTCCCGGGGATT+GGG | 0.404252 | tig0019363:+112498 | Msa1373150:CDS |
| CAAAGCTTGGTTCTTCAACT+AGG | 0.415056 | tig0019363:+112479 | Msa1373150:CDS |
| TCCTCTCCATTTAGGGCCCT+TGG | 0.417772 | tig0019363:-115061 | None:intergenic |
| CCAAGCTTTGCTTCCGGAAG+TGG | 0.420101 | tig0019363:-112466 | None:intergenic |
| AAATTCTGAAACCCCACTTC+CGG | 0.423531 | tig0019363:+112453 | Msa1373150:CDS |
| CAAGATGGAAGGACATTTGA+GGG | 0.423591 | tig0019363:+112382 | Msa1373150:CDS |
| TTTAGGGCCCTTGGCGTTGA+AGG | 0.425402 | tig0019363:-115052 | None:intergenic |
| CTTCAACTAGGCTTCGTCCC+GGG | 0.427401 | tig0019363:+112491 | Msa1373150:CDS |
| CGGAACCCAGCACGATCACC+AGG | 0.431496 | tig0019363:-114311 | None:intergenic |
| TGCCATTGCAAGATATATCA+TGG | 0.437451 | tig0019363:+110625 | Msa1373150:CDS |
| CTACCAAAAGTATCCTTAGA+TGG | 0.439534 | tig0019363:-110903 | None:intergenic |
| TCATTCCCTAATGTCAATAA+GGG | 0.444524 | tig0019363:+113447 | Msa1373150:CDS |
| GGAATCCAATCTCAGCTTGT+AGG | 0.450834 | tig0019363:+114819 | Msa1373150:CDS |
| AACTAATGACTAAAGTGAAC+GGG | 0.452413 | tig0019363:-115090 | None:intergenic |
| AGTCTCCTACAAGCTGAGAT+TGG | 0.457251 | tig0019363:-114824 | None:intergenic |
| GGTCCCCTGGTGATCGTGCT+GGG | 0.461837 | tig0019363:+114306 | Msa1373150:CDS |
| ACTGGAATTAGTGTGGTTAT+CGG | 0.462039 | tig0019363:-110315 | None:intergenic |
| ACATGTCTAAGGAAACTTCT+GGG | 0.469601 | tig0019363:+110859 | Msa1373150:CDS |
| GAAGAACCAAGCTTTGCTTC+CGG | 0.472595 | tig0019363:-112472 | None:intergenic |
| GTGGACGTAACAAATCAAAC+GGG | 0.472824 | tig0019363:-110662 | None:intergenic |
| TTTGCTACAGGGAAGAGTAT+TGG | 0.475530 | tig0019363:+111089 | Msa1373150:CDS |
| GTTGCAGGTTATTGAAATGA+TGG | 0.475950 | tig0019363:+114717 | Msa1373150:intron |
| TAGGTAACTCCTGGGTCCCC+TGG | 0.475953 | tig0019363:+114293 | Msa1373150:intron |
| AGTGTTGGCTGCTGATGGGT+TGG | 0.476294 | tig0019363:+112995 | Msa1373150:CDS |
| AGGAGTGAACGGGAGGAAGA+GGG | 0.476400 | tig0019363:-115032 | None:intergenic |
| TCCTTAGACATGTCCGAAGA+AGG | 0.477491 | tig0019363:-110849 | None:intergenic |
| ATAGAGCATTTCAAGAAAAG+TGG | 0.478194 | tig0019363:+113053 | Msa1373150:CDS |
| TGTGGACGTAACAAATCAAA+CGG | 0.478244 | tig0019363:-110663 | None:intergenic |
| GTGTTGGCTGCTGATGGGTT+GGG | 0.482417 | tig0019363:+112996 | Msa1373150:CDS |
| GACATGTCCGAAGAAGGAAC+AGG | 0.489693 | tig0019363:-110843 | None:intergenic |
| TACCTCCTTCATGCTTTCCA+CGG | 0.491263 | tig0019363:-114369 | None:intergenic |
| CAAGCTTTGCTTCCGGAAGT+GGG | 0.491393 | tig0019363:-112465 | None:intergenic |
| AGCTCTGCCGTTGGAGCTGT+GGG | 0.496151 | tig0019363:+110260 | Msa1373150:CDS |
| GATCGTGCTGGGTTCCGTCC+TGG | 0.498642 | tig0019363:+114317 | Msa1373150:CDS |
| TTGGCGTTGAAGGAGTGAAC+GGG | 0.499034 | tig0019363:-115042 | None:intergenic |
| GCAAGATGGAAGGACATTTG+AGG | 0.500220 | tig0019363:+112381 | Msa1373150:CDS |
| ATTGAAGTCACTTTGCAAGA+TGG | 0.504105 | tig0019363:+112367 | Msa1373150:CDS |
| CGGGGATTGGGTAATAGCCA+TGG | 0.506433 | tig0019363:+112510 | Msa1373150:CDS |
| ATCGAAATATTAACAACAGC+AGG | 0.506520 | tig0019363:-110960 | None:intergenic |
| CCACTTCCGGAAGCAAAGCT+TGG | 0.510741 | tig0019363:+112466 | Msa1373150:CDS |
| AAGGACATTTGAGGGGAAAG+TGG | 0.512120 | tig0019363:+112390 | Msa1373150:CDS |
| AGAGTGATACGGCCATGGCT+TGG | 0.514213 | tig0019363:+113366 | Msa1373150:CDS |
| GGAACAATCATTAACAAAGA+TGG | 0.515974 | tig0019363:+111116 | Msa1373150:CDS |
| ATGAAAGTGTTGGCTGCTGA+TGG | 0.519245 | tig0019363:+112990 | Msa1373150:CDS |
| TTCAACTAGGCTTCGTCCCG+GGG | 0.519860 | tig0019363:+112492 | Msa1373150:CDS |
| AAGCTCTGCCGTTGGAGCTG+TGG | 0.521174 | tig0019363:+110259 | Msa1373150:CDS |
| GCAAATGCTGCTGCTAAAGT+TGG | 0.521599 | tig0019363:+110936 | Msa1373150:CDS |
| CGTTCACTCCTTCAACGCCA+AGG | 0.524270 | tig0019363:+115044 | Msa1373150:three_prime_UTR |
| GAAATGATGGTGGACAAAGT+TGG | 0.526009 | tig0019363:+114730 | Msa1373150:CDS |
| ACCTCCTTCATGCTTTCCAC+GGG | 0.531605 | tig0019363:-114368 | None:intergenic |
| GCACAAAAGGTTCATCCAAA+GGG | 0.534147 | tig0019363:+111180 | Msa1373150:CDS |
| CATGAAAATCAACGACAACA+TGG | 0.539853 | tig0019363:-111157 | None:intergenic |
| TCTTCAACTAGGCTTCGTCC+CGG | 0.539957 | tig0019363:+112490 | Msa1373150:CDS |
| TCAGGAGAGTGATACGGCCA+TGG | 0.540162 | tig0019363:+113361 | Msa1373150:intron |
| ACAGGGAAGAGTATTGGCTC+TGG | 0.541432 | tig0019363:+111095 | Msa1373150:CDS |
| CTGTCACTGCTGGTATTGTA+AGG | 0.545354 | tig0019363:+112557 | Msa1373150:CDS |
| CATGGCTATTACCCAATCCC+CGG | 0.547015 | tig0019363:-112509 | None:intergenic |
| AAGGGAATGCGGACAACCCA+TGG | 0.551296 | tig0019363:-112527 | None:intergenic |
| GGCACAAAAGGTTCATCCAA+AGG | 0.554675 | tig0019363:+111179 | Msa1373150:CDS |
| TAAGGGCATTCTTGTACCAA+TGG | 0.554993 | tig0019363:+113464 | Msa1373150:CDS |
| TTGAACAGAAGCTCTGCCGT+TGG | 0.555512 | tig0019363:+110251 | Msa1373150:CDS |
| GGGCCACTTGTCAATATGGA+TGG | 0.558327 | tig0019363:+112945 | Msa1373150:CDS |
| GTTCACTCCTTCAACGCCAA+GGG | 0.561597 | tig0019363:+115045 | Msa1373150:three_prime_UTR |
| CTTCAGAATACTGTCACTGC+TGG | 0.562372 | tig0019363:+112547 | Msa1373150:CDS |
| TAGAGCATTTCAAGAAAAGT+GGG | 0.563537 | tig0019363:+113054 | Msa1373150:CDS |
| ACACACAGAGTCGATTGGTA+CGG | 0.565045 | tig0019363:-113024 | None:intergenic |
| AGATATATCATGGTTGACAT+TGG | 0.565755 | tig0019363:+110635 | Msa1373150:CDS |
| AACCATGATATATCTTGCAA+TGG | 0.566757 | tig0019363:-110627 | None:intergenic |
| GATATATCTTGCAATGGCAA+AGG | 0.570631 | tig0019363:-110621 | None:intergenic |
| CAGCAGTGACAGTATTCTGA+AGG | 0.571751 | tig0019363:-112546 | None:intergenic |
| CAAGTTCTAATGTGAACAAG+TGG | 0.573289 | tig0019363:+114899 | Msa1373150:three_prime_UTR |
| TAGGAACGTTCGTACGTGTG+CGG | 0.573882 | tig0019363:+110595 | Msa1373150:intron |
| AATATGGATGGAGAAATTGT+TGG | 0.576439 | tig0019363:+112957 | Msa1373150:CDS |
| TCTGTTTGTAAATACTCTCT+GGG | 0.577942 | tig0019363:-112783 | None:intergenic |
| AACGATACCCACAGCTCCAA+CGG | 0.578717 | tig0019363:-110267 | None:intergenic |
| GCTGTGGGTATCGTTGCTGT+TGG | 0.578767 | tig0019363:+110275 | Msa1373150:CDS |
| AAGCTGAGATTGGATTCCTC+CGG | 0.580230 | tig0019363:-114814 | None:intergenic |
| CACCGAAAAGGTTGTGACAG+TGG | 0.581944 | tig0019363:+110059 | None:intergenic |
| AAGTCACTTTGCAAGATGGA+AGG | 0.582092 | tig0019363:+112371 | Msa1373150:CDS |
| CTTGGCGTTGAAGGAGTGAA+CGG | 0.585542 | tig0019363:-115043 | None:intergenic |
| AAACTAATGACTAAAGTGAA+CGG | 0.587325 | tig0019363:-115091 | None:intergenic |
| GGGGATTGGGTAATAGCCAT+GGG | 0.587526 | tig0019363:+112511 | Msa1373150:CDS |
| ATGAAAATCAACGACAACAT+GGG | 0.587711 | tig0019363:-111156 | None:intergenic |
| AAAAGGTTCATCCAAAGGGA+AGG | 0.590674 | tig0019363:+111184 | Msa1373150:CDS |
| ATGGCTATTACCCAATCCCC+GGG | 0.595774 | tig0019363:-112508 | None:intergenic |
| GGTCAAGTTGGTAGAGCCAG+AGG | 0.599131 | tig0019363:-114955 | None:intergenic |
| TGAAAGTGTTGGCTGCTGAT+GGG | 0.600081 | tig0019363:+112991 | Msa1373150:CDS |
| GAACCCAGCACGATCACCAG+GGG | 0.600193 | tig0019363:-114309 | None:intergenic |
| GCACGATCACCAGGGGACCC+AGG | 0.601429 | tig0019363:-114302 | None:intergenic |
| ATTGCTCACTGGAATTAGTG+TGG | 0.602326 | tig0019363:-110322 | None:intergenic |
| TCTCCATCCATATTGACAAG+TGG | 0.603386 | tig0019363:-112948 | None:intergenic |
| CAAAGTTGGGGTGCCCATGA+AGG | 0.604534 | tig0019363:+114744 | Msa1373150:CDS |
| AACAGATTGTGCAATTAATG+TGG | 0.605597 | tig0019363:+112800 | Msa1373150:CDS |
| CATGTCTAAGGAAACTTCTG+GGG | 0.608468 | tig0019363:+110860 | Msa1373150:CDS |
| TGAATTTGATGGAAAGCCCG+TGG | 0.609844 | tig0019363:+114352 | Msa1373150:CDS |
| TGGTCGAAAGACGACAAATG+TGG | 0.613228 | tig0019363:-110681 | None:intergenic |
| AAAGCCCGTGGAAAGCATGA+AGG | 0.616163 | tig0019363:+114364 | Msa1373150:CDS |
| AAGCTTTGCTTCCGGAAGTG+GGG | 0.621714 | tig0019363:-112464 | None:intergenic |
| TTGTCGTCTTTCGACCAACA+TGG | 0.625198 | tig0019363:+110687 | Msa1373150:CDS |
| AATTCAATGACAACATCACC+AGG | 0.627515 | tig0019363:-114335 | None:intergenic |
| AGCATTCTTAGTCCAAGCCA+TGG | 0.630955 | tig0019363:-113378 | None:intergenic |
| TTGATGGTGTACAACAAAGC+TGG | 0.638889 | tig0019363:-114995 | None:intergenic |
| AGCAGTGACAGTATTCTGAA+GGG | 0.641778 | tig0019363:-112545 | None:intergenic |
| GTTAATATTTCGATTCCACA+AGG | 0.645580 | tig0019363:+110969 | Msa1373150:CDS |
| GCCAAGGGCCCTAAATGGAG+AGG | 0.645596 | tig0019363:+115060 | Msa1373150:three_prime_UTR |
| AGAAAGAGGACAAACCATGT+TGG | 0.646314 | tig0019363:-110701 | None:intergenic |
| GGAACCCAGCACGATCACCA+GGG | 0.647337 | tig0019363:-114310 | None:intergenic |
| GACTTTAAGTGTGATTCCGG+AGG | 0.648706 | tig0019363:+114798 | Msa1373150:CDS |
| ACAGTATTCTGAAGGGAATG+CGG | 0.654266 | tig0019363:-112538 | None:intergenic |
| ATGGCACAGGGAAATTCTGG+AGG | 0.659592 | tig0019363:+112924 | Msa1373150:intron |
| CAATGACAACATCACCAGGA+CGG | 0.663393 | tig0019363:-114331 | None:intergenic |
| GCCCGTGGAAAGCATGAAGG+AGG | 0.665398 | tig0019363:+114367 | Msa1373150:CDS |
| AACTTGTCATCAATGAAACA+AGG | 0.669183 | tig0019363:-114882 | None:intergenic |
| GCAGGTTATTGAAATGATGG+TGG | 0.673889 | tig0019363:+114720 | Msa1373150:intron |
| AGTGAACATCATGAAAGTGT+TGG | 0.676552 | tig0019363:+112980 | Msa1373150:CDS |
| GCGTTGAAGGAGTGAACGGG+AGG | 0.677613 | tig0019363:-115039 | None:intergenic |
| ACATGTCCGAAGAAGGAACA+GGG | 0.682454 | tig0019363:-110842 | None:intergenic |
| TGGCACAGGGAAATTCTGGA+GGG | 0.686679 | tig0019363:+112925 | Msa1373150:intron |
| AAGATGGAAGGACATTTGAG+GGG | 0.693003 | tig0019363:+112383 | Msa1373150:CDS |
| AATGATGGTGGACAAAGTTG+GGG | 0.709009 | tig0019363:+114732 | Msa1373150:CDS |
| ATGTCTAAGGAAACTTCTGG+GGG | 0.710738 | tig0019363:+110861 | Msa1373150:CDS |
| TGGACGTAACAAATCAAACG+GGG | 0.745894 | tig0019363:-110661 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAGTAAAAGAAAAT+AGG | - | tig0019363:112630-112649 | None:intergenic | 10.0% |
| !!! | TTTTTTTATAACAATAACAA+CGG | + | tig0019363:114030-114049 | Msa1373150:intron | 10.0% |
| !! | TAATCTTGAAATAAAGTTAA+TGG | + | tig0019363:110371-110390 | Msa1373150:intron | 15.0% |
| !!! | TATTTTCAGAATAATTTTCT+AGG | - | tig0019363:113799-113818 | None:intergenic | 15.0% |
| !! | TAAGATAAAATAAAATGATC+TGG | + | tig0019363:114456-114475 | Msa1373150:intron | 15.0% |
| !! | AAGATAAAATAAAATGATCT+GGG | + | tig0019363:114457-114476 | Msa1373150:intron | 15.0% |
| !! | AATAATCAATTCATCTAACA+TGG | + | tig0019363:110563-110582 | Msa1373150:intron | 20.0% |
| !!! | ATTTAGAACTGAAAATTTGT+AGG | + | tig0019363:110789-110808 | Msa1373150:intron | 20.0% |
| !!! | TTTAGAACTGAAAATTTGTA+GGG | + | tig0019363:110790-110809 | Msa1373150:intron | 20.0% |
| !! | AAGAAATATATCTTGAATTG+TGG | - | tig0019363:111742-111761 | None:intergenic | 20.0% |
| !! | TGTTAAATCTAACATTGAAA+TGG | - | tig0019363:112656-112675 | None:intergenic | 20.0% |
| !!! | CTGATTTTTTAAATGTCTTT+TGG | + | tig0019363:112680-112699 | Msa1373150:intron | 20.0% |
| !!! | TTCATGTATTGTATGATTTT+TGG | + | tig0019363:112712-112731 | Msa1373150:intron | 20.0% |
| !! | GATCATAATATATCCATAAA+AGG | - | tig0019363:113243-113262 | None:intergenic | 20.0% |
| !!! | AGTAAACTTTTTTTCTTTTC+AGG | + | tig0019363:113343-113362 | Msa1373150:intron | 20.0% |
| !! | AAAATTACACAAAACATAAG+CGG | - | tig0019363:114110-114129 | None:intergenic | 20.0% |
| !!! | AAATTTAAACGTTTTTGACT+AGG | + | tig0019363:114274-114293 | Msa1373150:intron | 20.0% |
| !! | AGATAAAATAAAATGATCTG+GGG | + | tig0019363:114458-114477 | Msa1373150:intron | 20.0% |
| !! | CAAACTTATACTAATCTTTA+GGG | + | tig0019363:114527-114546 | Msa1373150:intron | 20.0% |
| ! | AGAAAGAATTAACAAATACC+AGG | - | tig0019363:110148-110167 | None:intergenic | 25.0% |
| ! | GATGTATTTGTGAAAAACTA+AGG | - | tig0019363:111627-111646 | None:intergenic | 25.0% |
| ! | TGGTATATACTAACTAGTTA+TGG | - | tig0019363:111722-111741 | None:intergenic | 25.0% |
| ! | AATTCAATTGTTAGAGTGAT+AGG | - | tig0019363:111860-111879 | None:intergenic | 25.0% |
| ! | TATTAAAAGTGAATGTGGAA+AGG | - | tig0019363:111892-111911 | None:intergenic | 25.0% |
| !!! | TCCACATTCACTTTTAATAA+TGG | + | tig0019363:111893-111912 | Msa1373150:intron | 25.0% |
| !!! | CCACATTCACTTTTAATAAT+GGG | + | tig0019363:111894-111913 | Msa1373150:intron | 25.0% |
| ! | AGGATGTTAAGAAAGATAAA+GGG | - | tig0019363:111958-111977 | None:intergenic | 25.0% |
| ! | TCTTGATATTCTTATGTTGT+AGG | + | tig0019363:112123-112142 | Msa1373150:intron | 25.0% |
| !! | TTGAGTCTTAAATGATTTTC+AGG | - | tig0019363:112232-112251 | None:intergenic | 25.0% |
| ! | AAAGAAAATAGGTTAAAACC+AGG | - | tig0019363:112619-112638 | None:intergenic | 25.0% |
| ! | TTCAGATTGTCACATATAAA+CGG | - | tig0019363:113164-113183 | None:intergenic | 25.0% |
| !! | CTTACAATTTTCACCTTTTA+TGG | + | tig0019363:113227-113246 | Msa1373150:intron | 25.0% |
| ! | GTCAATCAAAATTGTTTATG+CGG | - | tig0019363:113265-113284 | None:intergenic | 25.0% |
| !! | TTGATTGACATACTTTTATG+TGG | + | tig0019363:113276-113295 | Msa1373150:intron | 25.0% |
| ! | CATCTAAAGATCGATTAATT+GGG | - | tig0019363:113496-113515 | None:intergenic | 25.0% |
| !! | ATACTTGTTACTATCATACT+TGG | + | tig0019363:113741-113760 | Msa1373150:intron | 25.0% |
| ! | TTTGATCTATCAATAAGATG+AGG | - | tig0019363:113824-113843 | None:intergenic | 25.0% |
| ! | ATTACAAATCAAAGAGAAGA+TGG | + | tig0019363:113918-113937 | Msa1373150:intron | 25.0% |
| ! | GATAAAATAAAATGATCTGG+GGG | + | tig0019363:114459-114478 | Msa1373150:intron | 25.0% |
| ! | CCTAAAGATTAGTATAAGTT+TGG | - | tig0019363:114529-114548 | None:intergenic | 25.0% |
| ! | CCAAACTTATACTAATCTTT+AGG | + | tig0019363:114526-114545 | Msa1373150:intron | 25.0% |
| ! | CATAATGAAGAATAATCTCA+CGG | - | tig0019363:114651-114670 | None:intergenic | 25.0% |
| ! | AAACTAATGACTAAAGTGAA+CGG | - | tig0019363:115094-115113 | None:intergenic | 25.0% |
| ! | ATCTATCATGAGTTATTTCC+TGG | + | tig0019363:110127-110146 | Msa1373150:exon | 30.0% |
| ! | TTGAAGAATCTCTCTGATTT+TGG | + | tig0019363:110194-110213 | Msa1373150:intron | 30.0% |
| ! | TGAAGAATCTCTCTGATTTT+GGG | + | tig0019363:110195-110214 | Msa1373150:intron | 30.0% |
| AGATTTAGTTAATTGCTCAC+TGG | - | tig0019363:110336-110355 | None:intergenic | 30.0% | |
| ! | TTAATGGCATGCTTTTCAAT+TGG | + | tig0019363:110387-110406 | Msa1373150:intron | 30.0% |
| AATATTGACGATGCATACAA+AGG | + | tig0019363:110527-110546 | Msa1373150:intron | 30.0% | |
| TCTAACATGGCTTCAAATTT+AGG | + | tig0019363:110576-110595 | Msa1373150:intron | 30.0% | |
| AACCATGATATATCTTGCAA+TGG | - | tig0019363:110630-110649 | None:intergenic | 30.0% | |
| AGATATATCATGGTTGACAT+TGG | + | tig0019363:110635-110654 | Msa1373150:CDS | 30.0% | |
| TAAAAGTTCAAACCAGAAAG+AGG | - | tig0019363:110718-110737 | None:intergenic | 30.0% | |
| ATCGAAATATTAACAACAGC+AGG | - | tig0019363:110963-110982 | None:intergenic | 30.0% | |
| GTTAATATTTCGATTCCACA+AGG | + | tig0019363:110969-110988 | Msa1373150:CDS | 30.0% | |
| AACGATTCATTCAGATGAAA+AGG | - | tig0019363:111003-111022 | None:intergenic | 30.0% | |
| !! | ATTGGCTTTGTAGATTTCTA+TGG | + | tig0019363:111065-111084 | Msa1373150:intron | 30.0% |
| !! | ATTTCTATGGTTTTGCTACA+GGG | + | tig0019363:111078-111097 | Msa1373150:CDS | 30.0% |
| GGAACAATCATTAACAAAGA+TGG | + | tig0019363:111116-111135 | Msa1373150:CDS | 30.0% | |
| ATGAAAATCAACGACAACAT+GGG | - | tig0019363:111159-111178 | None:intergenic | 30.0% | |
| TTCAAGACAGTGTACATATT+TGG | - | tig0019363:111237-111256 | None:intergenic | 30.0% | |
| ATATAACTGTAGCTTGATAC+TGG | - | tig0019363:111371-111390 | None:intergenic | 30.0% | |
| CTACATGAGTTAGAATAAGA+CGG | + | tig0019363:111694-111713 | Msa1373150:intron | 30.0% | |
| GAAAGAAAGTTCAACTGTTA+GGG | - | tig0019363:111819-111838 | None:intergenic | 30.0% | |
| TGAAAGAAAGTTCAACTGTT+AGG | - | tig0019363:111820-111839 | None:intergenic | 30.0% | |
| CCCATTATTAAAAGTGAATG+TGG | - | tig0019363:111897-111916 | None:intergenic | 30.0% | |
| CAAGATTAGAGAGAAAATTG+TGG | - | tig0019363:111925-111944 | None:intergenic | 30.0% | |
| GAGGATGTTAAGAAAGATAA+AGG | - | tig0019363:111959-111978 | None:intergenic | 30.0% | |
| CTTGTAATGAGCTTATGTAT+GGG | - | tig0019363:112012-112031 | None:intergenic | 30.0% | |
| ACTTGTAATGAGCTTATGTA+TGG | - | tig0019363:112013-112032 | None:intergenic | 30.0% | |
| ATGATAGTTTATCATGCTGT+AGG | + | tig0019363:112037-112056 | Msa1373150:intron | 30.0% | |
| ATATCAAGAACCAATTGTTC+TGG | - | tig0019363:112112-112131 | None:intergenic | 30.0% | |
| ATATTGAGAACCAATTGATC+CGG | - | tig0019363:112170-112189 | None:intergenic | 30.0% | |
| TCTGTTTGTAAATACTCTCT+GGG | - | tig0019363:112786-112805 | None:intergenic | 30.0% | |
| ATCTGTTTGTAAATACTCTC+TGG | - | tig0019363:112787-112806 | None:intergenic | 30.0% | |
| AACAGATTGTGCAATTAATG+TGG | + | tig0019363:112800-112819 | Msa1373150:CDS | 30.0% | |
| ATAAACTACCCAAGTAGATA+TGG | + | tig0019363:112849-112868 | Msa1373150:intron | 30.0% | |
| TCCATATTCCATATCTACTT+GGG | - | tig0019363:112860-112879 | None:intergenic | 30.0% | |
| ATCCATATTCCATATCTACT+TGG | - | tig0019363:112861-112880 | None:intergenic | 30.0% | |
| GTAGATATGGAATATGGATT+TGG | + | tig0019363:112862-112881 | Msa1373150:intron | 30.0% | |
| AATATGGATGGAGAAATTGT+TGG | + | tig0019363:112957-112976 | Msa1373150:CDS | 30.0% | |
| ! | ATAGAGCATTTCAAGAAAAG+TGG | + | tig0019363:113053-113072 | Msa1373150:CDS | 30.0% |
| ! | TAGAGCATTTCAAGAAAAGT+GGG | + | tig0019363:113054-113073 | Msa1373150:CDS | 30.0% |
| TCCAAGCAGAAAGTTTAATT+AGG | + | tig0019363:113198-113217 | Msa1373150:intron | 30.0% | |
| TGGTTAATACTTGAGTAGTT+AGG | + | tig0019363:113296-113315 | Msa1373150:intron | 30.0% | |
| TTCATTCCCTAATGTCAATA+AGG | + | tig0019363:113446-113465 | Msa1373150:CDS | 30.0% | |
| TCATTCCCTAATGTCAATAA+GGG | + | tig0019363:113447-113466 | Msa1373150:CDS | 30.0% | |
| ATTAATTGGGAACATACCAT+TGG | - | tig0019363:113483-113502 | None:intergenic | 30.0% | |
| GCATCTAAAGATCGATTAAT+TGG | - | tig0019363:113497-113516 | None:intergenic | 30.0% | |
| ! | TTTTCAGAATCTAGATTCAC+AGG | + | tig0019363:113529-113548 | Msa1373150:intron | 30.0% |
| TTCAAAGTTGTTTGCAAAGT+TGG | + | tig0019363:113599-113618 | Msa1373150:intron | 30.0% | |
| TTATTATGTTAGTGAAGCCA+TGG | + | tig0019363:113701-113720 | Msa1373150:intron | 30.0% | |
| TATTATGTTAGTGAAGCCAT+GGG | + | tig0019363:113702-113721 | Msa1373150:intron | 30.0% | |
| TGTTACTATCATACTTGGAT+AGG | + | tig0019363:113746-113765 | Msa1373150:intron | 30.0% | |
| GTTACTATCATACTTGGATA+GGG | + | tig0019363:113747-113766 | Msa1373150:intron | 30.0% | |
| CTAGGATTCTCACTTTAATA+GGG | - | tig0019363:113781-113800 | None:intergenic | 30.0% | |
| ! | TCTAGGATTCTCACTTTAAT+AGG | - | tig0019363:113782-113801 | None:intergenic | 30.0% |
| AAGTGAACACAAAAACAAAG+AGG | + | tig0019363:113842-113861 | Msa1373150:intron | 30.0% | |
| CGTAACTATCACAATTAGAT+AGG | - | tig0019363:113996-114015 | None:intergenic | 30.0% | |
| AATGTTGTCTAATCAGAAAG+AGG | - | tig0019363:114066-114085 | None:intergenic | 30.0% | |
| GAAATAATGTGTTTGTCACA+AGG | + | tig0019363:114251-114270 | Msa1373150:intron | 30.0% | |
| GATGTTGTCATTGAATTTGA+TGG | + | tig0019363:114341-114360 | Msa1373150:CDS | 30.0% | |
| !!! | TCGATTTTTTTTACTGTCTG+TGG | - | tig0019363:114628-114647 | None:intergenic | 30.0% |
| CATAGATGTAAAATTGTTGC+AGG | + | tig0019363:114702-114721 | Msa1373150:intron | 30.0% | |
| !! | CTTTTAACTACAACCTTCAT+GGG | - | tig0019363:114760-114779 | None:intergenic | 30.0% |
| !! | TCTTTTAACTACAACCTTCA+TGG | - | tig0019363:114761-114780 | None:intergenic | 30.0% |
| AACTTGTCATCAATGAAACA+AGG | - | tig0019363:114885-114904 | None:intergenic | 30.0% | |
| ATGTGAACAAGTGGTATATT+TGG | + | tig0019363:114908-114927 | Msa1373150:three_prime_UTR | 30.0% | |
| !!! | CCTTTATTTTTTGGTCAAGT+TGG | - | tig0019363:114970-114989 | None:intergenic | 30.0% |
| CCAACTTGACCAAAAAATAA+AGG | + | tig0019363:114967-114986 | Msa1373150:three_prime_UTR | 30.0% | |
| !!! | CTGGTAGAACCTTTATTTTT+TGG | - | tig0019363:114979-114998 | None:intergenic | 30.0% |
| ! | GGAGAAAAATTTAGTGTTGA+TGG | - | tig0019363:115014-115033 | None:intergenic | 30.0% |
| AACTAATGACTAAAGTGAAC+GGG | - | tig0019363:115093-115112 | None:intergenic | 30.0% | |
| !! | CGTTGAAGAGTGTAGAATTT+TGG | + | tig0019363:110097-110116 | Msa1373150:five_prime_UTR | 35.0% |
| ! | GAAGAATCTCTCTGATTTTG+GGG | + | tig0019363:110196-110215 | Msa1373150:intron | 35.0% |
| ! | AAGAATCTCTCTGATTTTGG+GGG | + | tig0019363:110197-110216 | Msa1373150:intron | 35.0% |
| ACTGGAATTAGTGTGGTTAT+CGG | - | tig0019363:110318-110337 | None:intergenic | 35.0% | |
| GATATATCTTGCAATGGCAA+AGG | - | tig0019363:110624-110643 | None:intergenic | 35.0% | |
| TGCCATTGCAAGATATATCA+TGG | + | tig0019363:110625-110644 | Msa1373150:CDS | 35.0% | |
| TGTGGACGTAACAAATCAAA+CGG | - | tig0019363:110666-110685 | None:intergenic | 35.0% | |
| CACATACATCTAAACATGCA+TGG | - | tig0019363:110765-110784 | None:intergenic | 35.0% | |
| ACATGTCTAAGGAAACTTCT+GGG | + | tig0019363:110859-110878 | Msa1373150:CDS | 35.0% | |
| TGATGAATCAAAGCCATCTA+AGG | + | tig0019363:110890-110909 | Msa1373150:CDS | 35.0% | |
| ! | AAGCCATCTAAGGATACTTT+TGG | + | tig0019363:110900-110919 | Msa1373150:CDS | 35.0% |
| !! | CTACCAAAAGTATCCTTAGA+TGG | - | tig0019363:110906-110925 | None:intergenic | 35.0% |
| GAAAAGGTAGAAAAACCTTG+TGG | - | tig0019363:110987-111006 | None:intergenic | 35.0% | |
| !!! | CTCTTTTGAGATTATGCTGA+TGG | + | tig0019363:111034-111053 | Msa1373150:intron | 35.0% |
| TTGAGATTATGCTGATGGTT+TGG | + | tig0019363:111039-111058 | Msa1373150:intron | 35.0% | |
| !! | GATTTCTATGGTTTTGCTAC+AGG | + | tig0019363:111077-111096 | Msa1373150:intron | 35.0% |
| CATGAAAATCAACGACAACA+TGG | - | tig0019363:111160-111179 | None:intergenic | 35.0% | |
| !!! | CATGTTGTCGTTGATTTTCA+TGG | + | tig0019363:111158-111177 | Msa1373150:CDS | 35.0% |
| !! | GTTGATTTTCATGGCACAAA+AGG | + | tig0019363:111167-111186 | Msa1373150:CDS | 35.0% |
| GAAGGTTTGTGTTCAAGAAA+GGG | + | tig0019363:111202-111221 | Msa1373150:intron | 35.0% | |
| AGTTCTCTGTGATGTAAATG+TGG | + | tig0019363:111288-111307 | Msa1373150:intron | 35.0% | |
| ! | TGCAAACGAAACATGCTTTT+GGG | - | tig0019363:111337-111356 | None:intergenic | 35.0% |
| ! | ATGCAAACGAAACATGCTTT+TGG | - | tig0019363:111338-111357 | None:intergenic | 35.0% |
| CTTTGTATGACTCAAAGCTA+GGG | + | tig0019363:111447-111466 | Msa1373150:intron | 35.0% | |
| GTACTTTCTGAGTCATGATT+TGG | + | tig0019363:111496-111515 | Msa1373150:intron | 35.0% | |
| TGATCCATTCCCAACAAAAT+AGG | + | tig0019363:111527-111546 | Msa1373150:intron | 35.0% | |
| GATCCATTCCCAACAAAATA+GGG | + | tig0019363:111528-111547 | Msa1373150:intron | 35.0% | |
| ! | AAGCAATGCCCTATTTTGTT+GGG | - | tig0019363:111539-111558 | None:intergenic | 35.0% |
| ! | TAAGCAATGCCCTATTTTGT+TGG | - | tig0019363:111540-111559 | None:intergenic | 35.0% |
| ! | TCGTTTTCATTCAGTTCTGT+AGG | - | tig0019363:111582-111601 | None:intergenic | 35.0% |
| ACTGTAACAACCAAACCTTT+AGG | + | tig0019363:111662-111681 | Msa1373150:intron | 35.0% | |
| AGTTCAACTGTTAGGGTAAA+AGG | - | tig0019363:111812-111831 | None:intergenic | 35.0% | |
| AAAAGTGAATGTGGAAAGGA+AGG | - | tig0019363:111888-111907 | None:intergenic | 35.0% | |
| GCTAAATGAGCTACTATACA+AGG | - | tig0019363:112063-112082 | None:intergenic | 35.0% | |
| ATAGTAGCTCATTTAGCTGT+AGG | + | tig0019363:112066-112085 | Msa1373150:intron | 35.0% | |
| ! | ATTGAAGTCACTTTGCAAGA+TGG | + | tig0019363:112367-112386 | Msa1373150:CDS | 35.0% |
| !! | ATCCCAAATCACTGCTTTTA+CGG | - | tig0019363:112752-112771 | None:intergenic | 35.0% |
| ATCTACTTGGGTAGTTTATG+CGG | - | tig0019363:112848-112867 | None:intergenic | 35.0% | |
| ACCCAAGTAGATATGGAATA+TGG | + | tig0019363:112856-112875 | Msa1373150:intron | 35.0% | |
| TTGCATGTTATCTGCTTGTA+TGG | + | tig0019363:112905-112924 | Msa1373150:intron | 35.0% | |
| ! | AGTGAACATCATGAAAGTGT+TGG | + | tig0019363:112980-112999 | Msa1373150:CDS | 35.0% |
| ! | ATTTTACACACAGAGTCGAT+TGG | - | tig0019363:113032-113051 | None:intergenic | 35.0% |
| AAGAAAAGTGGGTATGTTTC+TGG | + | tig0019363:113065-113084 | Msa1373150:intron | 35.0% | |
| GCCTAATTAAACTTTCTGCT+TGG | - | tig0019363:113202-113221 | None:intergenic | 35.0% | |
| !! | TTCTTTTCAGGAGAGTGATA+CGG | + | tig0019363:113355-113374 | Msa1373150:intron | 35.0% |
| GAATGCCCTTATTGACATTA+GGG | - | tig0019363:113455-113474 | None:intergenic | 35.0% | |
| AGAATGCCCTTATTGACATT+AGG | - | tig0019363:113456-113475 | None:intergenic | 35.0% | |
| !! | TGCTTTCTTTTGCTATGCTT+TGG | + | tig0019363:113661-113680 | Msa1373150:intron | 35.0% |
| TAATCAGAAAGAGGAGTAAG+GGG | - | tig0019363:114057-114076 | None:intergenic | 35.0% | |
| CTAATCAGAAAGAGGAGTAA+GGG | - | tig0019363:114058-114077 | None:intergenic | 35.0% | |
| TCTAATCAGAAAGAGGAGTA+AGG | - | tig0019363:114059-114078 | None:intergenic | 35.0% | |
| TACACAAAACATAAGCGGAA+TGG | - | tig0019363:114105-114124 | None:intergenic | 35.0% | |
| GAGCAACACAATGCATATTA+TGG | - | tig0019363:114204-114223 | None:intergenic | 35.0% | |
| !! | TTTTTGACTAGGTAACTCCT+GGG | + | tig0019363:114285-114304 | Msa1373150:intron | 35.0% |
| AATTCAATGACAACATCACC+AGG | - | tig0019363:114338-114357 | None:intergenic | 35.0% | |
| GTTGCAGGTTATTGAAATGA+TGG | + | tig0019363:114717-114736 | Msa1373150:intron | 35.0% | |
| !! | AAATGATGGTGGACAAAGTT+GGG | + | tig0019363:114731-114750 | Msa1373150:CDS | 35.0% |
| ! | CAAGTTCTAATGTGAACAAG+TGG | + | tig0019363:114899-114918 | Msa1373150:three_prime_UTR | 35.0% |
| !!! | GCACAAGTTTTTTTAACCTC+TGG | + | tig0019363:114939-114958 | Msa1373150:three_prime_UTR | 35.0% |
| ATTGCTCACTGGAATTAGTG+TGG | - | tig0019363:110325-110344 | None:intergenic | 40.0% | |
| TGGACGTAACAAATCAAACG+GGG | - | tig0019363:110664-110683 | None:intergenic | 40.0% | |
| GTGGACGTAACAAATCAAAC+GGG | - | tig0019363:110665-110684 | None:intergenic | 40.0% | |
| AGAAAGAGGACAAACCATGT+TGG | - | tig0019363:110704-110723 | None:intergenic | 40.0% | |
| ! | AACATGGTTTGTCCTCTTTC+TGG | + | tig0019363:110703-110722 | Msa1373150:intron | 40.0% |
| GACATGTCTAAGGAAACTTC+TGG | + | tig0019363:110858-110877 | Msa1373150:CDS | 40.0% | |
| CATGTCTAAGGAAACTTCTG+GGG | + | tig0019363:110860-110879 | Msa1373150:CDS | 40.0% | |
| ATGTCTAAGGAAACTTCTGG+GGG | + | tig0019363:110861-110880 | Msa1373150:CDS | 40.0% | |
| ! | ATGCTGATGGTTTGGAGTAT+TGG | + | tig0019363:111047-111066 | Msa1373150:intron | 40.0% |
| ! | TTTGCTACAGGGAAGAGTAT+TGG | + | tig0019363:111089-111108 | Msa1373150:CDS | 40.0% |
| GCACAAAAGGTTCATCCAAA+GGG | + | tig0019363:111180-111199 | Msa1373150:CDS | 40.0% | |
| AAAAGGTTCATCCAAAGGGA+AGG | + | tig0019363:111184-111203 | Msa1373150:CDS | 40.0% | |
| TTGAACACAAACCTTCCCTT+TGG | - | tig0019363:111198-111217 | None:intergenic | 40.0% | |
| GGAAGGTTTGTGTTCAAGAA+AGG | + | tig0019363:111201-111220 | Msa1373150:intron | 40.0% | |
| ! | ATGTGGTAGAAGAGTACAGT+TGG | + | tig0019363:111305-111324 | Msa1373150:intron | 40.0% |
| GCTTTGTATGACTCAAAGCT+AGG | + | tig0019363:111446-111465 | Msa1373150:intron | 40.0% | |
| ! | ATGCCCTATTTTGTTGGGAA+TGG | - | tig0019363:111534-111553 | None:intergenic | 40.0% |
| AACGACGATTCTGTGAATTC+TGG | + | tig0019363:111597-111616 | Msa1373150:intron | 40.0% | |
| AACAACCAAACCTTTAGGTG+AGG | + | tig0019363:111667-111686 | Msa1373150:intron | 40.0% | |
| ATGTAGTTGACCTCACCTAA+AGG | - | tig0019363:111680-111699 | None:intergenic | 40.0% | |
| ATCTAAATCCCTGCTAACGT+TGG | + | tig0019363:111764-111783 | Msa1373150:intron | 40.0% | |
| GACAGCAAAAAGGCAAAATG+AGG | - | tig0019363:111978-111997 | None:intergenic | 40.0% | |
| CTGAAAACTCGACAGCAAAA+AGG | - | tig0019363:111988-112007 | None:intergenic | 40.0% | |
| !! | TTGTATAGTAGCTTGCTTGC+CGG | + | tig0019363:112148-112167 | Msa1373150:intron | 40.0% |
| ! | AAGTCACTTTGCAAGATGGA+AGG | + | tig0019363:112371-112390 | Msa1373150:CDS | 40.0% |
| CAAGATGGAAGGACATTTGA+GGG | + | tig0019363:112382-112401 | Msa1373150:CDS | 40.0% | |
| AAGATGGAAGGACATTTGAG+GGG | + | tig0019363:112383-112402 | Msa1373150:CDS | 40.0% | |
| !! | AAATTCTGAAACCCCACTTC+CGG | + | tig0019363:112453-112472 | Msa1373150:CDS | 40.0% |
| ! | CAAAGCTTGGTTCTTCAACT+AGG | + | tig0019363:112479-112498 | Msa1373150:CDS | 40.0% |
| ! | ACAGTATTCTGAAGGGAATG+CGG | - | tig0019363:112541-112560 | None:intergenic | 40.0% |
| AGCAGTGACAGTATTCTGAA+GGG | - | tig0019363:112548-112567 | None:intergenic | 40.0% | |
| GGTGCGAAGATAAAACTTTC+TGG | + | tig0019363:112578-112597 | Msa1373150:intron | 40.0% | |
| TGACCGTAAAAGCAGTGATT+TGG | + | tig0019363:112746-112765 | Msa1373150:CDS | 40.0% | |
| GACCGTAAAAGCAGTGATTT+GGG | + | tig0019363:112747-112766 | Msa1373150:CDS | 40.0% | |
| ! | AGCAGTGATTTGGGATTTAG+TGG | + | tig0019363:112756-112775 | Msa1373150:CDS | 40.0% |
| TCTACTTGGGTAGTTTATGC+GGG | - | tig0019363:112847-112866 | None:intergenic | 40.0% | |
| TTATCTGCTTGTATGGCACA+GGG | + | tig0019363:112912-112931 | Msa1373150:intron | 40.0% | |
| TCTCCATCCATATTGACAAG+TGG | - | tig0019363:112951-112970 | None:intergenic | 40.0% | |
| !! | TAAGGGCATTCTTGTACCAA+TGG | + | tig0019363:113464-113483 | Msa1373150:CDS | 40.0% |
| TTCACAGGACAGTATCTTCA+TGG | + | tig0019363:113544-113563 | Msa1373150:intron | 40.0% | |
| TTGTGATAGTTACGTGTAGC+AGG | + | tig0019363:114002-114021 | Msa1373150:intron | 40.0% | |
| CACAATGCATATTATGGCAG+AGG | - | tig0019363:114198-114217 | None:intergenic | 40.0% | |
| !! | GTTTTTGACTAGGTAACTCC+TGG | + | tig0019363:114284-114303 | Msa1373150:intron | 40.0% |
| GCAGGTTATTGAAATGATGG+TGG | + | tig0019363:114720-114739 | Msa1373150:intron | 40.0% | |
| !! | GAAATGATGGTGGACAAAGT+TGG | + | tig0019363:114730-114749 | Msa1373150:CDS | 40.0% |
| !! | AATGATGGTGGACAAAGTTG+GGG | + | tig0019363:114732-114751 | Msa1373150:CDS | 40.0% |
| TGCGACTTTAAGTGTGATTC+CGG | + | tig0019363:114795-114814 | Msa1373150:CDS | 40.0% | |
| !! | TTGATGGTGTACAACAAAGC+TGG | - | tig0019363:114998-115017 | None:intergenic | 40.0% |
| GTTGAGATCCTCTCCATTTA+GGG | - | tig0019363:115071-115090 | None:intergenic | 40.0% | |
| TGGTCGAAAGACGACAAATG+TGG | - | tig0019363:110684-110703 | None:intergenic | 45.0% | |
| TTGTCGTCTTTCGACCAACA+TGG | + | tig0019363:110687-110706 | Msa1373150:CDS | 45.0% | |
| AGTTAGCCCTGTTCCTTCTT+CGG | + | tig0019363:110836-110855 | Msa1373150:CDS | 45.0% | |
| ACATGTCCGAAGAAGGAACA+GGG | - | tig0019363:110845-110864 | None:intergenic | 45.0% | |
| TCCTTCTTCGGACATGTCTA+AGG | + | tig0019363:110848-110867 | Msa1373150:CDS | 45.0% | |
| TCCTTAGACATGTCCGAAGA+AGG | - | tig0019363:110852-110871 | None:intergenic | 45.0% | |
| GCAAATGCTGCTGCTAAAGT+TGG | + | tig0019363:110936-110955 | Msa1373150:CDS | 45.0% | |
| GGCACAAAAGGTTCATCCAA+AGG | + | tig0019363:111179-111198 | Msa1373150:CDS | 45.0% | |
| TGTATGACTCAAAGCTAGGG+TGG | + | tig0019363:111450-111469 | Msa1373150:intron | 45.0% | |
| TAGGGTGGCTTAAGATCTGA+TGG | + | tig0019363:111465-111484 | Msa1373150:intron | 45.0% | |
| AGGGTGGCTTAAGATCTGAT+GGG | + | tig0019363:111466-111485 | Msa1373150:intron | 45.0% | |
| GTTGACCTCACCTAAAGGTT+TGG | - | tig0019363:111675-111694 | None:intergenic | 45.0% | |
| CTCAAAGTCCAACGTTAGCA+GGG | - | tig0019363:111775-111794 | None:intergenic | 45.0% | |
| ACTCAAAGTCCAACGTTAGC+AGG | - | tig0019363:111776-111795 | None:intergenic | 45.0% | |
| AGTGAATGTGGAAAGGAAGG+AGG | - | tig0019363:111885-111904 | None:intergenic | 45.0% | |
| ! | AGCTTGCTTGCCAGAACAAT+TGG | + | tig0019363:112099-112118 | Msa1373150:intron | 45.0% |
| GGCAAGCAAGCTACTATACA+AGG | - | tig0019363:112149-112168 | None:intergenic | 45.0% | |
| TCTGATGTCTTCATTGCACG+AGG | - | tig0019363:112317-112336 | None:intergenic | 45.0% | |
| GCAAGATGGAAGGACATTTG+AGG | + | tig0019363:112381-112400 | Msa1373150:CDS | 45.0% | |
| AAGGACATTTGAGGGGAAAG+TGG | + | tig0019363:112390-112409 | Msa1373150:CDS | 45.0% | |
| GAAGAACCAAGCTTTGCTTC+CGG | - | tig0019363:112475-112494 | None:intergenic | 45.0% | |
| CAGCAGTGACAGTATTCTGA+AGG | - | tig0019363:112549-112568 | None:intergenic | 45.0% | |
| CTTCAGAATACTGTCACTGC+TGG | + | tig0019363:112547-112566 | Msa1373150:CDS | 45.0% | |
| CTGTCACTGCTGGTATTGTA+AGG | + | tig0019363:112557-112576 | Msa1373150:CDS | 45.0% | |
| TGGCTGTAAAAGATGTCTCC+TGG | + | tig0019363:112598-112617 | Msa1373150:intron | 45.0% | |
| TGGGTAGTTTATGCGGGAAA+AGG | - | tig0019363:112841-112860 | None:intergenic | 45.0% | |
| GTTATCTGCTTGTATGGCAC+AGG | + | tig0019363:112911-112930 | Msa1373150:intron | 45.0% | |
| TGTATGGCACAGGGAAATTC+TGG | + | tig0019363:112921-112940 | Msa1373150:intron | 45.0% | |
| !! | ATGAAAGTGTTGGCTGCTGA+TGG | + | tig0019363:112990-113009 | Msa1373150:CDS | 45.0% |
| !! | TGAAAGTGTTGGCTGCTGAT+GGG | + | tig0019363:112991-113010 | Msa1373150:CDS | 45.0% |
| ACACACAGAGTCGATTGGTA+CGG | - | tig0019363:113027-113046 | None:intergenic | 45.0% | |
| AGCATTCTTAGTCCAAGCCA+TGG | - | tig0019363:113381-113400 | None:intergenic | 45.0% | |
| TATGTTAGTGAAGCCATGGG+CGG | + | tig0019363:113705-113724 | Msa1373150:intron | 45.0% | |
| ! | CATTGTGTTGCTCAAATGCG+AGG | + | tig0019363:114211-114230 | Msa1373150:intron | 45.0% |
| CAATGACAACATCACCAGGA+CGG | - | tig0019363:114334-114353 | None:intergenic | 45.0% | |
| TGAATTTGATGGAAAGCCCG+TGG | + | tig0019363:114352-114371 | Msa1373150:CDS | 45.0% | |
| TACCTCCTTCATGCTTTCCA+CGG | - | tig0019363:114372-114391 | None:intergenic | 45.0% | |
| ATCTGGGGGAGCAAAACAAT+TGG | + | tig0019363:114473-114492 | Msa1373150:intron | 45.0% | |
| GACTTTAAGTGTGATTCCGG+AGG | + | tig0019363:114798-114817 | Msa1373150:CDS | 45.0% | |
| AAGCTGAGATTGGATTCCTC+CGG | - | tig0019363:114817-114836 | None:intergenic | 45.0% | |
| GGAATCCAATCTCAGCTTGT+AGG | + | tig0019363:114819-114838 | Msa1373150:CDS | 45.0% | |
| AGTCTCCTACAAGCTGAGAT+TGG | - | tig0019363:114827-114846 | None:intergenic | 45.0% | |
| GGTTGAGATCCTCTCCATTT+AGG | - | tig0019363:115072-115091 | None:intergenic | 45.0% | |
| TTGAACAGAAGCTCTGCCGT+TGG | + | tig0019363:110251-110270 | Msa1373150:CDS | 50.0% | |
| AACGATACCCACAGCTCCAA+CGG | - | tig0019363:110270-110289 | None:intergenic | 50.0% | |
| TAGGAACGTTCGTACGTGTG+CGG | + | tig0019363:110595-110614 | Msa1373150:intron | 50.0% | |
| GACATGTCCGAAGAAGGAAC+AGG | - | tig0019363:110846-110865 | None:intergenic | 50.0% | |
| !! | ACAGGGAAGAGTATTGGCTC+TGG | + | tig0019363:111095-111114 | Msa1373150:CDS | 50.0% |
| ! | GAAGTGCTACTGTTCCTGCT+TGG | + | tig0019363:111417-111436 | Msa1373150:intron | 50.0% |
| TACTGTTCCTGCTTGGTCTG+TGG | + | tig0019363:111424-111443 | Msa1373150:intron | 50.0% | |
| TACAAAGCCACAGACCAAGC+AGG | - | tig0019363:111434-111453 | None:intergenic | 50.0% | |
| ! | AGCTTGCTTGCCGGATCAAT+TGG | + | tig0019363:112157-112176 | Msa1373150:intron | 50.0% |
| AAGCTTTGCTTCCGGAAGTG+GGG | - | tig0019363:112467-112486 | None:intergenic | 50.0% | |
| CAAGCTTTGCTTCCGGAAGT+GGG | - | tig0019363:112468-112487 | None:intergenic | 50.0% | |
| TCTTCAACTAGGCTTCGTCC+CGG | + | tig0019363:112490-112509 | Msa1373150:CDS | 50.0% | |
| ATGGCTATTACCCAATCCCC+GGG | - | tig0019363:112511-112530 | None:intergenic | 50.0% | |
| CATGGCTATTACCCAATCCC+CGG | - | tig0019363:112512-112531 | None:intergenic | 50.0% | |
| GGGGATTGGGTAATAGCCAT+GGG | + | tig0019363:112511-112530 | Msa1373150:CDS | 50.0% | |
| ATGGCACAGGGAAATTCTGG+AGG | + | tig0019363:112924-112943 | Msa1373150:intron | 50.0% | |
| TGGCACAGGGAAATTCTGGA+GGG | + | tig0019363:112925-112944 | Msa1373150:intron | 50.0% | |
| TGGAGGGCCACTTGTCAATA+TGG | + | tig0019363:112941-112960 | Msa1373150:CDS | 50.0% | |
| GGGCCACTTGTCAATATGGA+TGG | + | tig0019363:112945-112964 | Msa1373150:CDS | 50.0% | |
| GTAGAAGTTTGAACCGCCCA+TGG | - | tig0019363:113721-113740 | None:intergenic | 50.0% | |
| ! | AAAGCCCGTGGAAAGCATGA+AGG | + | tig0019363:114364-114383 | Msa1373150:CDS | 50.0% |
| ACCTCCTTCATGCTTTCCAC+GGG | - | tig0019363:114371-114390 | None:intergenic | 50.0% | |
| ! | TTGGCGTTGAAGGAGTGAAC+GGG | - | tig0019363:115045-115064 | None:intergenic | 50.0% |
| ! | CTTGGCGTTGAAGGAGTGAA+CGG | - | tig0019363:115046-115065 | None:intergenic | 50.0% |
| GTTCACTCCTTCAACGCCAA+GGG | + | tig0019363:115045-115064 | Msa1373150:three_prime_UTR | 50.0% | |
| ! | GCTGTGGGTATCGTTGCTGT+TGG | + | tig0019363:110275-110294 | Msa1373150:CDS | 55.0% |
| CCAAGCTTTGCTTCCGGAAG+TGG | - | tig0019363:112469-112488 | None:intergenic | 55.0% | |
| CCACTTCCGGAAGCAAAGCT+TGG | + | tig0019363:112466-112485 | Msa1373150:CDS | 55.0% | |
| CTTCAACTAGGCTTCGTCCC+GGG | + | tig0019363:112491-112510 | Msa1373150:CDS | 55.0% | |
| TTCAACTAGGCTTCGTCCCG+GGG | + | tig0019363:112492-112511 | Msa1373150:CDS | 55.0% | |
| CGGGGATTGGGTAATAGCCA+TGG | + | tig0019363:112510-112529 | Msa1373150:CDS | 55.0% | |
| AAGGGAATGCGGACAACCCA+TGG | - | tig0019363:112530-112549 | None:intergenic | 55.0% | |
| !! | AGTGTTGGCTGCTGATGGGT+TGG | + | tig0019363:112995-113014 | Msa1373150:CDS | 55.0% |
| !! | GTGTTGGCTGCTGATGGGTT+GGG | + | tig0019363:112996-113015 | Msa1373150:CDS | 55.0% |
| TCAGGAGAGTGATACGGCCA+TGG | + | tig0019363:113361-113380 | Msa1373150:intron | 55.0% | |
| AGAGTGATACGGCCATGGCT+TGG | + | tig0019363:113366-113385 | Msa1373150:CDS | 55.0% | |
| ! | CAAAGTTGGGGTGCCCATGA+AGG | + | tig0019363:114744-114763 | Msa1373150:CDS | 55.0% |
| !! | GGTCAAGTTGGTAGAGCCAG+AGG | - | tig0019363:114958-114977 | None:intergenic | 55.0% |
| AGGAGTGAACGGGAGGAAGA+GGG | - | tig0019363:115035-115054 | None:intergenic | 55.0% | |
| AAGGAGTGAACGGGAGGAAG+AGG | - | tig0019363:115036-115055 | None:intergenic | 55.0% | |
| CGTTCACTCCTTCAACGCCA+AGG | + | tig0019363:115044-115063 | Msa1373150:three_prime_UTR | 55.0% | |
| ! | TTTAGGGCCCTTGGCGTTGA+AGG | - | tig0019363:115055-115074 | None:intergenic | 55.0% |
| TCAACGCCAAGGGCCCTAAA+TGG | + | tig0019363:115055-115074 | Msa1373150:three_prime_UTR | 55.0% | |
| ! | TCCTCTCCATTTAGGGCCCT+TGG | - | tig0019363:115064-115083 | None:intergenic | 55.0% |
| AAGCTCTGCCGTTGGAGCTG+TGG | + | tig0019363:110259-110278 | Msa1373150:CDS | 60.0% | |
| AGCTCTGCCGTTGGAGCTGT+GGG | + | tig0019363:110260-110279 | Msa1373150:CDS | 60.0% | |
| TAGGCTTCGTCCCGGGGATT+GGG | + | tig0019363:112498-112517 | Msa1373150:CDS | 60.0% | |
| TAGGTAACTCCTGGGTCCCC+TGG | + | tig0019363:114293-114312 | Msa1373150:intron | 60.0% | |
| GAACCCAGCACGATCACCAG+GGG | - | tig0019363:114312-114331 | None:intergenic | 60.0% | |
| GGAACCCAGCACGATCACCA+GGG | - | tig0019363:114313-114332 | None:intergenic | 60.0% | |
| ! | GCCCGTGGAAAGCATGAAGG+AGG | + | tig0019363:114367-114386 | Msa1373150:CDS | 60.0% |
| GCGTTGAAGGAGTGAACGGG+AGG | - | tig0019363:115042-115061 | None:intergenic | 60.0% | |
| GCCAAGGGCCCTAAATGGAG+AGG | + | tig0019363:115060-115079 | Msa1373150:three_prime_UTR | 60.0% | |
| CTAGGCTTCGTCCCGGGGAT+TGG | + | tig0019363:112497-112516 | Msa1373150:CDS | 65.0% | |
| GGTCCCCTGGTGATCGTGCT+GGG | + | tig0019363:114306-114325 | Msa1373150:CDS | 65.0% | |
| CGGAACCCAGCACGATCACC+AGG | - | tig0019363:114314-114333 | None:intergenic | 65.0% | |
| GATCGTGCTGGGTTCCGTCC+TGG | + | tig0019363:114317-114336 | Msa1373150:CDS | 65.0% | |
| GCACGATCACCAGGGGACCC+AGG | - | tig0019363:114305-114324 | None:intergenic | 70.0% | |
| GGGTCCCCTGGTGATCGTGC+TGG | + | tig0019363:114305-114324 | Msa1373150:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019363 | gene | 110062 | 115142 | 110062 | ID=Msa1373150;Name=Msa1373150 |
| tig0019363 | mRNA | 110062 | 115142 | 110062 | ID=Msa1373150-mRNA-1;Parent=Msa1373150;Name=Msa1373150-mRNA-1;_AED=0.23;_eAED=0.23;_QI=72|1|1|1|0.8|0.72|11|302|433 |
| tig0019363 | exon | 110062 | 110148 | 110062 | ID=Msa1373150-mRNA-1:exon:3087;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 110236 | 110335 | 110236 | ID=Msa1373150-mRNA-1:exon:3088;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 110598 | 110708 | 110598 | ID=Msa1373150-mRNA-1:exon:3089;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 110811 | 110990 | 110811 | ID=Msa1373150-mRNA-1:exon:3090;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 111078 | 111205 | 111078 | ID=Msa1373150-mRNA-1:exon:3091;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 112367 | 112578 | 112367 | ID=Msa1373150-mRNA-1:exon:3092;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 112740 | 112821 | 112740 | ID=Msa1373150-mRNA-1:exon:3093;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 112933 | 113075 | 112933 | ID=Msa1373150-mRNA-1:exon:3094;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 113365 | 113485 | 113365 | ID=Msa1373150-mRNA-1:exon:3095;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 114296 | 114388 | 114296 | ID=Msa1373150-mRNA-1:exon:3096;Parent=Msa1373150-mRNA-1 |
| tig0019363 | exon | 114724 | 115142 | 114724 | ID=Msa1373150-mRNA-1:exon:3097;Parent=Msa1373150-mRNA-1 |
| tig0019363 | five_prime_UTR | 110062 | 110133 | 110062 | ID=Msa1373150-mRNA-1:five_prime_utr;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 110134 | 110148 | 110134 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 110236 | 110335 | 110236 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 110598 | 110708 | 110598 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 110811 | 110990 | 110811 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 111078 | 111205 | 111078 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 112367 | 112578 | 112367 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 112740 | 112821 | 112740 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 112933 | 113075 | 112933 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 113365 | 113485 | 113365 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 114296 | 114388 | 114296 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | CDS | 114724 | 114840 | 114724 | ID=Msa1373150-mRNA-1:cds;Parent=Msa1373150-mRNA-1 |
| tig0019363 | three_prime_UTR | 114841 | 115142 | 114841 | ID=Msa1373150-mRNA-1:three_prime_utr;Parent=Msa1373150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
