Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1383620 | XP_039689637.1 | 98.234 | 623 | 8 | 1 | 1 | 620 | 1 | 623 | 0.0 | 1255 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1383620 | sp|Q9M8Z7|U80A2_ARATH | 72.850 | 593 | 152 | 5 | 36 | 620 | 46 | 637 | 0.0 | 870 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1383620 | G7JVN6 | 98.234 | 623 | 8 | 1 | 1 | 620 | 1 | 623 | 0.0 | 1255 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0671160 | Msa1383620 | 0.992024 | 7.209912e-191 | -8.615850e-47 |
Msa0671200 | Msa1383620 | 0.992152 | 1.319419e-191 | -8.615850e-47 |
Msa0686950 | Msa1383620 | 0.818913 | 1.529486e-52 | -8.615850e-47 |
Msa0827520 | Msa1383620 | 0.821908 | 3.144194e-53 | -8.615850e-47 |
Msa1342960 | Msa1383620 | 0.813575 | 2.387817e-51 | -8.615850e-47 |
Msa0536360 | Msa1383620 | 0.967123 | 7.594394e-127 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1383620 | MtrunA17_Chr4g0010281 | 98.234 | 623 | 8 | 1 | 1 | 620 | 1 | 623 | 0.0 | 1255 |
Msa1383620 | MtrunA17_Chr4g0010291 | 88.406 | 621 | 71 | 1 | 1 | 620 | 1 | 621 | 0.0 | 1114 |
Msa1383620 | MtrunA17_Chr7g0248971 | 69.884 | 518 | 147 | 4 | 109 | 618 | 81 | 597 | 0.0 | 751 |
Msa1383620 | MtrunA17_Chr1g0201761 | 53.093 | 582 | 249 | 7 | 35 | 607 | 30 | 596 | 0.0 | 631 |
Msa1383620 | MtrunA17_Chr0c19g0493781 | 70.382 | 314 | 81 | 2 | 317 | 618 | 3 | 316 | 3.96e-164 | 471 |
Msa1383620 | MtrunA17_Chr7g0224211 | 80.928 | 194 | 36 | 1 | 428 | 620 | 32 | 225 | 4.55e-108 | 324 |
Msa1383620 | MtrunA17_Chr0c19g0493791 | 65.877 | 211 | 68 | 2 | 109 | 316 | 81 | 290 | 4.72e-88 | 275 |
Msa1383620 | MtrunA17_Chr7g0224201 | 97.727 | 44 | 1 | 0 | 395 | 438 | 28 | 71 | 1.49e-26 | 104 |
Msa1383620 | MtrunA17_Chr2g0301441 | 24.286 | 490 | 292 | 14 | 179 | 593 | 9 | 494 | 5.62e-24 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1383620 | AT3G07020.1 | 72.850 | 593 | 152 | 5 | 36 | 620 | 46 | 637 | 0.0 | 870 |
Msa1383620 | AT3G07020.2 | 72.850 | 593 | 152 | 5 | 36 | 620 | 46 | 637 | 0.0 | 870 |
Msa1383620 | AT3G07020.3 | 77.985 | 536 | 111 | 4 | 91 | 620 | 21 | 555 | 0.0 | 857 |
Msa1383620 | AT1G43620.7 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa1383620 | AT1G43620.1 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa1383620 | AT1G43620.3 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa1383620 | AT1G43620.5 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa1383620 | AT1G43620.2 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa1383620 | AT1G43620.6 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa1383620 | AT1G43620.4 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa1383620 | AT1G43620.8 | 61.029 | 408 | 156 | 2 | 199 | 603 | 7 | 414 | 0.0 | 551 |
Msa1383620 | AT5G24750.1 | 22.901 | 524 | 269 | 20 | 179 | 593 | 13 | 510 | 1.74e-20 | 95.9 |
Find 169 sgRNAs with CRISPR-Local
Find 789 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGATTGCATCTGCTTTAA+AGG | 0.106875 | tig0020610:-22803 | None:intergenic |
GGGATCTAGCATAAAATTTA+TGG | 0.155857 | tig0020610:-28760 | None:intergenic |
CACATTTACGCGCAGGATTA+TGG | 0.195776 | tig0020610:+22130 | Msa1383620:intron |
AAATAGTCGACTCGTTAATT+TGG | 0.198468 | tig0020610:+25063 | Msa1383620:CDS |
TAAATTCGTTGCACGGTTAT+AGG | 0.211881 | tig0020610:-18766 | None:intergenic |
TATAACCGTGCAACGAATTT+AGG | 0.222382 | tig0020610:+18768 | Msa1383620:five_prime_UTR |
CTTTCCAACTTAAACTTACT+TGG | 0.226606 | tig0020610:-20696 | None:intergenic |
AAATTCGTTGCACGGTTATA+GGG | 0.247547 | tig0020610:-18765 | None:intergenic |
AGCATCAGGTTCAACATCTA+TGG | 0.265308 | tig0020610:-21288 | None:intergenic |
CGCAATAGGAAAACGCTTAC+AGG | 0.271564 | tig0020610:+21442 | Msa1383620:CDS |
TCAAATATAGCTAGATGTTT+TGG | 0.284083 | tig0020610:+29782 | Msa1383620:CDS |
AATAACATTATTTACATGTT+TGG | 0.295463 | tig0020610:-21324 | None:intergenic |
CTCCCGAGTCTCTTGTAAAA+TGG | 0.296494 | tig0020610:+26575 | Msa1383620:CDS |
ATACATCCAGCAAGGACTTT+TGG | 0.299091 | tig0020610:-22238 | None:intergenic |
ACATTCCTCATGCATATATA+TGG | 0.304700 | tig0020610:+25180 | Msa1383620:CDS |
TAAAGCAACAAGCTGGTTAT+AGG | 0.307719 | tig0020610:+24940 | Msa1383620:CDS |
GAAAGTAGTTCTTCAAAATC+AGG | 0.312165 | tig0020610:+18994 | Msa1383620:CDS |
TTCATTTGATTTCTCTGAAC+AGG | 0.322157 | tig0020610:-22721 | None:intergenic |
AATAAAGGATGGGGAGGTCT+TGG | 0.336180 | tig0020610:+28150 | Msa1383620:CDS |
AAAATTCAAGATAATACTAT+TGG | 0.339192 | tig0020610:+30117 | Msa1383620:three_prime_UTR |
ATGCCAAGTTGGTTTAGTTT+AGG | 0.346975 | tig0020610:+30090 | Msa1383620:three_prime_UTR |
GAAAATGAGGATGGGGTAAC+TGG | 0.354917 | tig0020610:+29680 | Msa1383620:CDS |
GAACCTGATGCTCTTGGTGC+TGG | 0.371885 | tig0020610:+21299 | Msa1383620:CDS |
ATAAAGGATGGGGAGGTCTT+GGG | 0.373464 | tig0020610:+28151 | Msa1383620:CDS |
TCTGTTTCCAATGCTATTAA+CGG | 0.374174 | tig0020610:+18970 | Msa1383620:CDS |
ATGATTGCATCTGCTTTAAA+GGG | 0.375168 | tig0020610:-22802 | None:intergenic |
GTACGACGCGCGCGAGATTC+CGG | 0.376591 | tig0020610:-18800 | None:intergenic |
AATATGAATTGGAATTTGTA+AGG | 0.391265 | tig0020610:-24703 | None:intergenic |
GGAAGCGAAAACTCGTCAAC+TGG | 0.393586 | tig0020610:-28723 | None:intergenic |
TTACATTGGGTTTGGTAGCC+TGG | 0.397683 | tig0020610:+26621 | Msa1383620:CDS |
CGAATTTAGGTCGCATTCAC+CGG | 0.401513 | tig0020610:+18781 | Msa1383620:five_prime_UTR |
GGCGATCCAAAAGTCCTTGC+TGG | 0.401590 | tig0020610:+22232 | Msa1383620:CDS |
GTCGACTCGTTAATTTGGCT+TGG | 0.402916 | tig0020610:+25068 | Msa1383620:CDS |
TAAAGAACCTGATATTGATT+CGG | 0.403186 | tig0020610:+22774 | Msa1383620:CDS |
GGGATTAGACCGCATGTATC+TGG | 0.414358 | tig0020610:-30044 | None:intergenic |
CAGAGAGGCATCATCAATAA+AGG | 0.416569 | tig0020610:+28135 | Msa1383620:CDS |
GTCGTACACGACGGCGGAAA+TGG | 0.420386 | tig0020610:+18816 | Msa1383620:exon |
CTTGGTAGTGCTTTCGCTGT+TGG | 0.421034 | tig0020610:-18926 | None:intergenic |
TGACCAGCTTGCACTGGATC+AGG | 0.421237 | tig0020610:-29810 | None:intergenic |
TAATAACAAAATTCCTGTAC+AGG | 0.421966 | tig0020610:+20773 | Msa1383620:CDS |
AAGCCGATTTACATTGGGTT+TGG | 0.425126 | tig0020610:+26613 | Msa1383620:CDS |
ACTTAATTATAATCAACAAA+AGG | 0.425988 | tig0020610:-30065 | None:intergenic |
GGAGCAGGAACAACAGCTGC+AGG | 0.428556 | tig0020610:+28517 | Msa1383620:CDS |
AAAATTTGTGCTGCATCCTC+AGG | 0.433469 | tig0020610:-20750 | None:intergenic |
TGGATAATGTTCCCCATGAT+TGG | 0.434419 | tig0020610:+28283 | Msa1383620:CDS |
CAAAATTCCTGTACAGGAAA+AGG | 0.437724 | tig0020610:+20779 | Msa1383620:CDS |
AATATAGTGATGCTTATTGT+TGG | 0.439998 | tig0020610:+21392 | Msa1383620:CDS |
AAAGAACCTGATATTGATTC+GGG | 0.440384 | tig0020610:+22775 | Msa1383620:CDS |
ATGTACTCTCTCACCCCAAA+AGG | 0.446704 | tig0020610:-28673 | None:intergenic |
CTTAATTATAATCAACAAAA+GGG | 0.447375 | tig0020610:-30064 | None:intergenic |
CTACCAAACCCAATGTAAAT+CGG | 0.447578 | tig0020610:-26616 | None:intergenic |
AAAGGACTCTATATACTTGT+TGG | 0.449349 | tig0020610:+28263 | Msa1383620:CDS |
TTGTAAGGCCTCTGCGACAT+GGG | 0.451316 | tig0020610:-24688 | None:intergenic |
GGGACACCCGAATCAATATC+AGG | 0.456903 | tig0020610:-22781 | None:intergenic |
GATCCAGCACCAAGAGCATC+AGG | 0.457284 | tig0020610:-21302 | None:intergenic |
AACAAGTATATAGAGTCCTT+TGG | 0.457917 | tig0020610:-28261 | None:intergenic |
TTTATGGCATCAATCAACTT+AGG | 0.459700 | tig0020610:-28744 | None:intergenic |
CAAGAAAGTATACCATATGC+TGG | 0.460319 | tig0020610:-22835 | None:intergenic |
AGTATTATCCACAACTTCCT+TGG | 0.464782 | tig0020610:-18944 | None:intergenic |
ATCTTCTTCAAGCGATCGAT+CGG | 0.466243 | tig0020610:+18879 | Msa1383620:CDS |
ACTTTCACCGTTAATAGCAT+TGG | 0.466940 | tig0020610:-18977 | None:intergenic |
GTGACAAGCCGATTTACATT+GGG | 0.467971 | tig0020610:+26608 | Msa1383620:CDS |
GCGGTCTGACCAGCTTGCAC+TGG | 0.468068 | tig0020610:-29816 | None:intergenic |
TATTTAGGCATTCCGAGCAC+GGG | 0.468115 | tig0020610:+20612 | Msa1383620:intron |
GTACAGCCATTTGTCGCAAT+AGG | 0.469796 | tig0020610:+21428 | Msa1383620:CDS |
GACAGCACGGAAATATAGAT+TGG | 0.471093 | tig0020610:-29864 | None:intergenic |
ACAAATAATTGTAGAAGCAC+TGG | 0.471461 | tig0020610:+28101 | Msa1383620:CDS |
ATATTTGAGAAACAACTAGA+TGG | 0.475374 | tig0020610:-29767 | None:intergenic |
AATAAGGGCTTTCTTCCATC+GGG | 0.477438 | tig0020610:+22685 | Msa1383620:CDS |
CAGAGCGGCAGAGACATCTA+AGG | 0.480999 | tig0020610:+20727 | Msa1383620:CDS |
AAATAAGGGCTTTCTTCCAT+CGG | 0.483407 | tig0020610:+22684 | Msa1383620:CDS |
GAGACATGATTAATGATCTT+CGG | 0.484868 | tig0020610:+25096 | Msa1383620:CDS |
CTTTAAAGCAGATGCAATCA+TGG | 0.486667 | tig0020610:+22804 | Msa1383620:CDS |
ATAAGCATCACTATATTCAA+TGG | 0.493905 | tig0020610:-21386 | None:intergenic |
AGATGGCTCTGTGTTAGTCT+CGG | 0.496643 | tig0020610:-29744 | None:intergenic |
TAATTAAGTGTATGCCAAGT+TGG | 0.497356 | tig0020610:+30079 | Msa1383620:three_prime_UTR |
CATCTTGTTCCTAAACCAAA+AGG | 0.500484 | tig0020610:+25209 | Msa1383620:CDS |
AAGTCCAAGTAAGTTTAAGT+TGG | 0.500706 | tig0020610:+20692 | Msa1383620:CDS |
TGCCAAAGCTATGGAAAATG+AGG | 0.501279 | tig0020610:+29667 | Msa1383620:CDS |
GATGGCTCTGTGTTAGTCTC+GGG | 0.503225 | tig0020610:-29743 | None:intergenic |
CGACCAGTCACATATTTAAG+TGG | 0.511895 | tig0020610:+25137 | Msa1383620:CDS |
GGTGACAAGCCGATTTACAT+TGG | 0.512372 | tig0020610:+26607 | Msa1383620:CDS |
TAGGTGCATCATGGAGGAGC+AGG | 0.514132 | tig0020610:+28502 | Msa1383620:intron |
GAAAACTCGTCAACTGGGAT+AGG | 0.515281 | tig0020610:-28717 | None:intergenic |
TCTCCATGGGATACATCTAC+TGG | 0.517942 | tig0020610:-20657 | None:intergenic |
GGTGAGAGAGTACATGATAG+AGG | 0.520986 | tig0020610:+28681 | Msa1383620:CDS |
AAAAGCATTACACAGGTACA+AGG | 0.521148 | tig0020610:-29973 | None:intergenic |
GTATTTAGGCATTCCGAGCA+CGG | 0.521904 | tig0020610:+20611 | Msa1383620:intron |
TAAAGGATGGGGAGGTCTTG+GGG | 0.523194 | tig0020610:+28152 | Msa1383620:CDS |
TCGTCAACTGGGATAGGTGG+AGG | 0.525360 | tig0020610:-28711 | None:intergenic |
AAGAAAGTATACCATATGCT+GGG | 0.526798 | tig0020610:-22834 | None:intergenic |
CAAGTAAGTTTAAGTTGGAA+AGG | 0.532012 | tig0020610:+20697 | Msa1383620:CDS |
CTTGTAAAATGGCTTGAAGA+TGG | 0.533465 | tig0020610:+26586 | Msa1383620:CDS |
AAAGCAACAAGCTGGTTATA+GGG | 0.535295 | tig0020610:+24941 | Msa1383620:CDS |
AAAAGTGTTGGAATAGTTTG+TGG | 0.536475 | tig0020610:-18709 | None:intergenic |
TTTGTAAGGCCTCTGCGACA+TGG | 0.537363 | tig0020610:-24689 | None:intergenic |
ATACCTAAACTAAACCAACT+TGG | 0.538344 | tig0020610:-30093 | None:intergenic |
AACTCGTCAACTGGGATAGG+TGG | 0.539725 | tig0020610:-28714 | None:intergenic |
TCAATGGAGGGATGTAATCA+AGG | 0.541268 | tig0020610:-21370 | None:intergenic |
AGAGTACATGATAGAGGAGT+CGG | 0.543698 | tig0020610:+28687 | Msa1383620:CDS |
AATAGTTTGTGGGGTGAAGA+AGG | 0.548092 | tig0020610:-18698 | None:intergenic |
ACTTTAGACAACCCCGTGCT+CGG | 0.548450 | tig0020610:-20624 | None:intergenic |
ATATCAGGTTCTTTACATGC+AGG | 0.549794 | tig0020610:-22766 | None:intergenic |
TGTACTCTCTCACCCCAAAA+GGG | 0.555500 | tig0020610:-28672 | None:intergenic |
GCATCAGGTTCAACATCTAT+GGG | 0.555937 | tig0020610:-21287 | None:intergenic |
GATGTTGAACCTGATGCTCT+TGG | 0.556989 | tig0020610:+21293 | Msa1383620:CDS |
GAGGCATCATCAATAAAGGA+TGG | 0.557400 | tig0020610:+28139 | Msa1383620:CDS |
AGGCATCATCAATAAAGGAT+GGG | 0.559831 | tig0020610:+28140 | Msa1383620:CDS |
AATTGAACTTGCCAAAGCTA+TGG | 0.566850 | tig0020610:+29658 | Msa1383620:CDS |
ACCTAGATTACTTACGTCCA+TGG | 0.567184 | tig0020610:-24738 | None:intergenic |
AGCTATGGAAAATGAGGATG+GGG | 0.568155 | tig0020610:+29673 | Msa1383620:CDS |
ATTCCTGATCCAGTGCAAGC+TGG | 0.573829 | tig0020610:+29807 | Msa1383620:exon |
GAAGAACGGCGGCGATTCTG+CGG | 0.575342 | tig0020610:-18847 | None:intergenic |
AGACCGCATGTATCTGGTCA+TGG | 0.577144 | tig0020610:-30038 | None:intergenic |
AAAGTGTTGGAATAGTTTGT+GGG | 0.578068 | tig0020610:-18708 | None:intergenic |
AAAGCTATGGAAAATGAGGA+TGG | 0.580480 | tig0020610:+29671 | Msa1383620:CDS |
AATTCGTTGCACGGTTATAG+GGG | 0.580592 | tig0020610:-18764 | None:intergenic |
GGCATCATCAATAAAGGATG+GGG | 0.581975 | tig0020610:+28141 | Msa1383620:CDS |
ACATATTTAAGTGGCTCACA+AGG | 0.582563 | tig0020610:+25146 | Msa1383620:CDS |
GGATGTGGAAAGTCAGCTGT+TGG | 0.583601 | tig0020610:-24906 | None:intergenic |
AAGCACTACCAAGGAAGTTG+TGG | 0.583970 | tig0020610:+18936 | Msa1383620:CDS |
TCTCGTGTAAAGCAACAAGC+TGG | 0.588206 | tig0020610:+24933 | Msa1383620:CDS |
CTCTGAACAGGTATCTCAGA+GGG | 0.588857 | tig0020610:-22709 | None:intergenic |
AAGCTATGGAAAATGAGGAT+GGG | 0.596673 | tig0020610:+29672 | Msa1383620:CDS |
AGCATCACTATATTCAATGG+AGG | 0.600366 | tig0020610:-21383 | None:intergenic |
AAGATGAACTTGAAGAAGAA+CGG | 0.602390 | tig0020610:-18861 | None:intergenic |
TGCGACCTAAATTCGTTGCA+CGG | 0.605297 | tig0020610:-18773 | None:intergenic |
TGTAGAAGCACTGGAAACCA+CGG | 0.606828 | tig0020610:+28110 | Msa1383620:CDS |
TTTCCCAGTGACAGAACCAA+AGG | 0.607256 | tig0020610:+28245 | Msa1383620:intron |
GCATCACTATATTCAATGGA+GGG | 0.608601 | tig0020610:-21382 | None:intergenic |
TGTTGCTTTACACGAGACAA+AGG | 0.610672 | tig0020610:-24927 | None:intergenic |
GAGAAACAACTAGATGGAGA+TGG | 0.612917 | tig0020610:-29761 | None:intergenic |
TTTACACGAGACAAAGGATG+TGG | 0.614796 | tig0020610:-24921 | None:intergenic |
GAAGCGAAAACTCGTCAACT+GGG | 0.615288 | tig0020610:-28722 | None:intergenic |
AGAAAGTATACCATATGCTG+GGG | 0.621182 | tig0020610:-22833 | None:intergenic |
TTTGGTTTAGGAACAAGATG+AGG | 0.623316 | tig0020610:-25206 | None:intergenic |
TGCTAATATTCTATGTGGTG+CGG | 0.624936 | tig0020610:-18675 | None:intergenic |
ATCATCAATAAAGGATGGGG+AGG | 0.625136 | tig0020610:+28144 | Msa1383620:CDS |
GGTATCTCAGAGGGTCCCGA+TGG | 0.626655 | tig0020610:-22700 | None:intergenic |
TGATTGCATCTGCTTTAAAG+GGG | 0.630864 | tig0020610:-22801 | None:intergenic |
ATTTAGGCATTCCGAGCACG+GGG | 0.632997 | tig0020610:+20613 | Msa1383620:intron |
CGTCAACTGGGATAGGTGGA+GGG | 0.633125 | tig0020610:-28710 | None:intergenic |
GAGCAGGAACAACAGCTGCA+GGG | 0.634133 | tig0020610:+28518 | Msa1383620:CDS |
CTCGCGCGCGTCGTACACGA+CGG | 0.635581 | tig0020610:+18807 | Msa1383620:five_prime_UTR |
GATGATGCCTCTCTGTCCCG+TGG | 0.637290 | tig0020610:-28127 | None:intergenic |
TTGCCAGTAGATGTATCCCA+TGG | 0.638199 | tig0020610:+20654 | Msa1383620:CDS |
GTACACGACGGCGGAAATGG+CGG | 0.638539 | tig0020610:+18819 | Msa1383620:exon |
ATGCTTATTGTTGGTACACG+AGG | 0.640971 | tig0020610:+21401 | Msa1383620:CDS |
GAGCCACTTAAATATGTGAC+TGG | 0.642352 | tig0020610:-25140 | None:intergenic |
GTAGAAGCACTGGAAACCAC+GGG | 0.650496 | tig0020610:+28111 | Msa1383620:CDS |
AAAGAACAAAAGCATTACAC+AGG | 0.650752 | tig0020610:-29980 | None:intergenic |
AAAGCATTACACAGGTACAA+GGG | 0.667107 | tig0020610:-29972 | None:intergenic |
TCACCATGACCAGATACATG+CGG | 0.671918 | tig0020610:+30035 | Msa1383620:three_prime_UTR |
CGTAGTACATACATCCAGCA+AGG | 0.672886 | tig0020610:-22246 | None:intergenic |
CAACAGCGAAAGCACTACCA+AGG | 0.672888 | tig0020610:+18927 | Msa1383620:CDS |
GGACTCCATATATATGCATG+AGG | 0.673554 | tig0020610:-25185 | None:intergenic |
GGATACATCTACTGGCAATG+TGG | 0.682659 | tig0020610:-20649 | None:intergenic |
AGGGCATACCCATGTCGCAG+AGG | 0.684256 | tig0020610:+24680 | Msa1383620:intron |
GAAGGTGCTAATATTCTATG+TGG | 0.684453 | tig0020610:-18680 | None:intergenic |
GCAGAGACATCTAAGGCCTG+AGG | 0.684529 | tig0020610:+20734 | Msa1383620:CDS |
AAGTGTTGGAATAGTTTGTG+GGG | 0.687419 | tig0020610:-18707 | None:intergenic |
GCGCGCGTCGTACACGACGG+CGG | 0.692303 | tig0020610:+18810 | Msa1383620:five_prime_UTR |
CTGGAAACCACGGGACAGAG+AGG | 0.715104 | tig0020610:+28120 | Msa1383620:CDS |
TCTCTGAACAGGTATCTCAG+AGG | 0.717964 | tig0020610:-22710 | None:intergenic |
GAAAGTATACCATATGCTGG+GGG | 0.718769 | tig0020610:-22832 | None:intergenic |
ATAGCTACCGTAAAAGACGA+CGG | 0.733687 | tig0020610:+21245 | Msa1383620:CDS |
AATGTTATTGATGATTCACA+TGG | 0.734188 | tig0020610:+21338 | Msa1383620:CDS |
ATGAACTTGAAGAAGAACGG+CGG | 0.744439 | tig0020610:-18858 | None:intergenic |
GAGTTGCTAATCTAACACGA+TGG | 0.756555 | tig0020610:-22153 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CGATATTTATAAAATTAATT+TGG | + | tig0020610:19401-19420 | Msa1383620:intron | 10.0% |
!! | TATATATAATTTCTTTAATG+AGG | + | tig0020610:19627-19646 | Msa1383620:intron | 10.0% |
!! | CTATTATAAATAAAAAACTT+GGG | - | tig0020610:19966-19985 | None:intergenic | 10.0% |
!! | TCTATTATAAATAAAAAACT+TGG | - | tig0020610:19967-19986 | None:intergenic | 10.0% |
!!! | TAAATAAATTTATTTCTTCA+CGG | - | tig0020610:20356-20375 | None:intergenic | 10.0% |
!!! | TCAATTTTACTAAATTAATA+GGG | - | tig0020610:20461-20480 | None:intergenic | 10.0% |
!!! | ATCAATTTTACTAAATTAAT+AGG | - | tig0020610:20462-20481 | None:intergenic | 10.0% |
!!! | TACTTACATTTTTTATAATA+TGG | + | tig0020610:22859-22878 | Msa1383620:intron | 10.0% |
!! | AATAAATGATTTATATATGT+TGG | + | tig0020610:25411-25430 | Msa1383620:intron | 10.0% |
!!! | TTAATAACTTATATTTTTTG+TGG | + | tig0020610:28610-28629 | Msa1383620:intron | 10.0% |
!!! | ATTAAATTTTTATTTACCTT+GGG | - | tig0020610:28783-28802 | None:intergenic | 10.0% |
!!! | AATTAAATTTTTATTTACCT+TGG | - | tig0020610:28784-28803 | None:intergenic | 10.0% |
!!! | ATGATTTTGTTTTTACTTTT+TGG | + | tig0020610:19205-19224 | Msa1383620:intron | 15.0% |
!!! | AATTAATTTGGTAAAATTAG+CGG | + | tig0020610:19413-19432 | Msa1383620:intron | 15.0% |
!! | GAATTATATTAAAATTCAGA+GGG | - | tig0020610:20496-20515 | None:intergenic | 15.0% |
!! | TGAATTATATTAAAATTCAG+AGG | - | tig0020610:20497-20516 | None:intergenic | 15.0% |
!!! | TACAAATATTTAACACTTTT+AGG | - | tig0020610:20890-20909 | None:intergenic | 15.0% |
!! | TTAAATATTTGTATGTATGT+TGG | + | tig0020610:20897-20916 | Msa1383620:intron | 15.0% |
!!! | AGAATTTTTTATTTCAATTG+GGG | - | tig0020610:20942-20961 | None:intergenic | 15.0% |
!!! | GAGAATTTTTTATTTCAATT+GGG | - | tig0020610:20943-20962 | None:intergenic | 15.0% |
!! | TAATAATTTAACAAAAGCTA+TGG | - | tig0020610:21120-21139 | None:intergenic | 15.0% |
!! | ATTAAAAACAACAATAAAGA+TGG | - | tig0020610:21198-21217 | None:intergenic | 15.0% |
!! | AATAACATTATTTACATGTT+TGG | - | tig0020610:21327-21346 | None:intergenic | 15.0% |
!! | TATTATTGTTAACAAAATTG+AGG | + | tig0020610:22099-22118 | Msa1383620:intron | 15.0% |
!!! | AACTATTTTCAATAACTTAT+TGG | - | tig0020610:22485-22504 | None:intergenic | 15.0% |
!! | AATAAGTTATTGAAAATAGT+TGG | + | tig0020610:22484-22503 | Msa1383620:intron | 15.0% |
!! | ATAAGTTATTGAAAATAGTT+GGG | + | tig0020610:22485-22504 | Msa1383620:intron | 15.0% |
!!! | TACATTTTTTATAATATGGT+TGG | + | tig0020610:22863-22882 | Msa1383620:intron | 15.0% |
!!! | GCAAAATATTTTTTAGATTA+GGG | - | tig0020610:23528-23547 | None:intergenic | 15.0% |
!!! | TGCAAAATATTTTTTAGATT+AGG | - | tig0020610:23529-23548 | None:intergenic | 15.0% |
!! | ATCATAAAAGTAGAAAAAAT+AGG | - | tig0020610:24590-24609 | None:intergenic | 15.0% |
!! | ACTGTTAAATACTTAAAATA+GGG | + | tig0020610:24661-24680 | Msa1383620:intron | 15.0% |
!! | ATTGTGAAAAAAATATGAAT+TGG | - | tig0020610:24717-24736 | None:intergenic | 15.0% |
!!! | TTGTTTACTAATTTTTCTTT+TGG | + | tig0020610:24804-24823 | Msa1383620:intron | 15.0% |
!! | GATCAATATTAAATCAAATA+TGG | - | tig0020610:25017-25036 | None:intergenic | 15.0% |
!!! | ATTGCTGTTTTTATAATTTT+GGG | + | tig0020610:25295-25314 | Msa1383620:intron | 15.0% |
!!! | CAAATTTTAATGGAATAATA+AGG | - | tig0020610:25768-25787 | None:intergenic | 15.0% |
!!! | TTAAAAATATAGTTGATATG+AGG | - | tig0020610:26290-26309 | None:intergenic | 15.0% |
!! | AAAAAACTAATAACAATGAA+GGG | - | tig0020610:26387-26406 | None:intergenic | 15.0% |
!! | TAAAAAACTAATAACAATGA+AGG | - | tig0020610:26388-26407 | None:intergenic | 15.0% |
!!! | TCATTGTTATTAGTTTTTTA+AGG | + | tig0020610:26388-26407 | Msa1383620:intron | 15.0% |
!!! | CATTGTTATTAGTTTTTTAA+GGG | + | tig0020610:26389-26408 | Msa1383620:intron | 15.0% |
!!! | TTATTTTTTTATTTGCAGAT+TGG | + | tig0020610:26494-26513 | Msa1383620:intron | 15.0% |
!!! | TATTTTTTTATTTGCAGATT+GGG | + | tig0020610:26495-26514 | Msa1383620:intron | 15.0% |
!!! | ATATGAATTTATACACATTT+TGG | + | tig0020610:26998-27017 | Msa1383620:intron | 15.0% |
!! | ATTTATAAATGGATATTGTT+TGG | - | tig0020610:27666-27685 | None:intergenic | 15.0% |
!!! | TTTTTTTATGCATTTTTTGT+AGG | + | tig0020610:28483-28502 | Msa1383620:intron | 15.0% |
!!! | TATGTTTGAAACTTATTATT+TGG | + | tig0020610:29448-29467 | Msa1383620:intron | 15.0% |
!!! | ATTATTTGGTTTATATTTGT+TGG | + | tig0020610:29462-29481 | Msa1383620:intron | 15.0% |
!! | CTTAATTATAATCAACAAAA+GGG | - | tig0020610:30067-30086 | None:intergenic | 15.0% |
!! | ACTTAATTATAATCAACAAA+AGG | - | tig0020610:30068-30087 | None:intergenic | 15.0% |
!! | AAAATTCAAGATAATACTAT+TGG | + | tig0020610:30117-30136 | Msa1383620:three_prime_UTR | 15.0% |
!!! | TTGTTTTTACTTTTTGGTTT+TGG | + | tig0020610:19211-19230 | Msa1383620:intron | 20.0% |
!! | CTTTCTTTCACTTATAATTT+AGG | + | tig0020610:19439-19458 | Msa1383620:intron | 20.0% |
!! | TTTCTTTCACTTGTAATTTA+CGG | - | tig0020610:19472-19491 | None:intergenic | 20.0% |
!! | TGATACATTTGCTTATTTAA+CGG | - | tig0020610:19499-19518 | None:intergenic | 20.0% |
!!! | AATTAATTTTGGAAGAATGA+CGG | + | tig0020610:19551-19570 | Msa1383620:intron | 20.0% |
!! | ATAAATAAAAAACTTGGGTT+GGG | - | tig0020610:19961-19980 | None:intergenic | 20.0% |
!! | TATAAATAAAAAACTTGGGT+TGG | - | tig0020610:19962-19981 | None:intergenic | 20.0% |
!! | AACATGTTTATACATGATAA+TGG | - | tig0020610:20134-20153 | None:intergenic | 20.0% |
!! | AATATTATTATTTGCTTCAG+TGG | + | tig0020610:20183-20202 | Msa1383620:intron | 20.0% |
!!! | CGAGAATTTTTTATTTCAAT+TGG | - | tig0020610:20944-20963 | None:intergenic | 20.0% |
!! | TAAAAAATTCTCGTTATGTT+TGG | + | tig0020610:20951-20970 | Msa1383620:intron | 20.0% |
!! | AAGGAAAAGAAAATAAGTTA+TGG | - | tig0020610:21150-21169 | None:intergenic | 20.0% |
!! | ATAAAAACTCAACTAAAGAT+GGG | - | tig0020610:21986-22005 | None:intergenic | 20.0% |
!! | AATAAAAACTCAACTAAAGA+TGG | - | tig0020610:21987-22006 | None:intergenic | 20.0% |
!! | TTTACTCAAATCAAATGATA+TGG | + | tig0020610:22610-22629 | Msa1383620:intron | 20.0% |
!!! | TAATCTCTTATCTTTTTTAC+TGG | - | tig0020610:23269-23288 | None:intergenic | 20.0% |
!!! | AATTTTGTTTTTATCGCTTA+CGG | - | tig0020610:23479-23498 | None:intergenic | 20.0% |
!! | ATGTACTATTAAACTATTCA+TGG | + | tig0020610:23995-24014 | Msa1383620:intron | 20.0% |
!! | CACTGTTAAATACTTAAAAT+AGG | + | tig0020610:24660-24679 | Msa1383620:intron | 20.0% |
!! | AATATGAATTGGAATTTGTA+AGG | - | tig0020610:24706-24725 | None:intergenic | 20.0% |
!! | ATTAGTAAACAAAAGACTTA+AGG | - | tig0020610:24796-24815 | None:intergenic | 20.0% |
!!! | TCTTTTGGTTCTTTTAAAAT+TGG | + | tig0020610:24819-24838 | Msa1383620:intron | 20.0% |
!! | AAATACAAAGAATGAACATT+AGG | - | tig0020610:25248-25267 | None:intergenic | 20.0% |
!!! | CATTGCTGTTTTTATAATTT+TGG | + | tig0020610:25294-25313 | Msa1383620:intron | 20.0% |
!!! | AAAGTATTCTCCTAAATATA+TGG | - | tig0020610:25443-25462 | None:intergenic | 20.0% |
!! | ATTAGTGTTTACAACTTATA+TGG | + | tig0020610:25542-25561 | Msa1383620:intron | 20.0% |
!! | TTAGTGTTTACAACTTATAT+GGG | + | tig0020610:25543-25562 | Msa1383620:intron | 20.0% |
!! | ATTAAAATTTGTCTATGCTT+CGG | + | tig0020610:25777-25796 | Msa1383620:intron | 20.0% |
!! | TATTGAATCTTAATAGAGTT+TGG | + | tig0020610:25808-25827 | Msa1383620:intron | 20.0% |
!! | ATTGAATCTTAATAGAGTTT+GGG | + | tig0020610:25809-25828 | Msa1383620:intron | 20.0% |
!!! | CAACTATATTTTTAACAAGT+TGG | + | tig0020610:26295-26314 | Msa1383620:intron | 20.0% |
!!! | ATTTTTTTATTTGCAGATTG+GGG | + | tig0020610:26496-26515 | Msa1383620:intron | 20.0% |
!! | ATATAACTAACCAAAAATGA+CGG | - | tig0020610:26961-26980 | None:intergenic | 20.0% |
!!! | CAAGTATCTTTAAGTTAATA+AGG | - | tig0020610:27161-27180 | None:intergenic | 20.0% |
!! | CCATATAAGTGATTTATAAA+TGG | - | tig0020610:27677-27696 | None:intergenic | 20.0% |
!! | CCATTTATAAATCACTTATA+TGG | + | tig0020610:27674-27693 | Msa1383620:intron | 20.0% |
!! | ATAAATCACTTATATGGATT+TGG | + | tig0020610:27680-27699 | Msa1383620:intron | 20.0% |
!!! | AGAGAAATTATTTGTTATGT+AGG | - | tig0020610:27992-28011 | None:intergenic | 20.0% |
!! | GTTAAGTATATATAAAGAGA+GGG | - | tig0020610:28040-28059 | None:intergenic | 20.0% |
!! | AGTTAAGTATATATAAAGAG+AGG | - | tig0020610:28041-28060 | None:intergenic | 20.0% |
!!! | ATTATTTGTGTCATCTTTTT+TGG | - | tig0020610:28090-28109 | None:intergenic | 20.0% |
!!! | CTTGGTTCATTATTTTTTAA+AGG | + | tig0020610:28353-28372 | Msa1383620:intron | 20.0% |
!! | AAACGATATCATATTTACTA+GGG | - | tig0020610:28580-28599 | None:intergenic | 20.0% |
!!! | CTGATACACATAAAATTTTA+AGG | - | tig0020610:28808-28827 | None:intergenic | 20.0% |
!!! | TTATGTTAAAGTACTTTTGT+TGG | - | tig0020610:29277-29296 | None:intergenic | 20.0% |
!! | ATTGATCTTGTATTACTAAT+GGG | - | tig0020610:29415-29434 | None:intergenic | 20.0% |
!! | AATTGATCTTGTATTACTAA+TGG | - | tig0020610:29416-29435 | None:intergenic | 20.0% |
!! | TCGAAAAAATGAAAAAGTGT+TGG | - | tig0020610:18724-18743 | None:intergenic | 25.0% |
! | GTTAATGACGTGAAAAAATA+TGG | + | tig0020610:19257-19276 | Msa1383620:intron | 25.0% |
! | ACACTTCAAAATTTATCTTG+TGG | - | tig0020610:19284-19303 | None:intergenic | 25.0% |
! | AATATCGGTATATACATCAT+TGG | - | tig0020610:19388-19407 | None:intergenic | 25.0% |
!!! | GTGTAAAGTAGTTTTACATT+AGG | + | tig0020610:19670-19689 | Msa1383620:intron | 25.0% |
!!! | TAAAGTAGTTTTACATTAGG+CGG | + | tig0020610:19673-19692 | Msa1383620:intron | 25.0% |
! | ATTCTCATATCTATGAGAAT+CGG | - | tig0020610:19706-19725 | None:intergenic | 25.0% |
! | TAGATATGAGAATGTTATGA+TGG | + | tig0020610:19713-19732 | Msa1383620:intron | 25.0% |
! | GATCATTAGAGAGAAAATTA+TGG | + | tig0020610:19774-19793 | Msa1383620:intron | 25.0% |
! | ACTTGCCATTGTAAAAAAAA+CGG | + | tig0020610:19798-19817 | Msa1383620:intron | 25.0% |
!! | AAAAACGGTAGTCTTTTATT+AGG | + | tig0020610:19813-19832 | Msa1383620:intron | 25.0% |
!! | ATTAGGTGGATTTATCATTA+AGG | + | tig0020610:19830-19849 | Msa1383620:intron | 25.0% |
!!! | TGTCTTTTTTCTCATTTTGA+TGG | - | tig0020610:19997-20016 | None:intergenic | 25.0% |
! | AAATGAGAAAAAAGACACTA+AGG | + | tig0020610:20000-20019 | Msa1383620:intron | 25.0% |
! | TCATGTATAAACATGTTCAA+TGG | + | tig0020610:20137-20156 | Msa1383620:intron | 25.0% |
!!! | GTTCTAGAACGAAATTAATT+CGG | - | tig0020610:20243-20262 | None:intergenic | 25.0% |
! | ATTTATTTAAGAGAAACCAG+AGG | + | tig0020610:20367-20386 | Msa1383620:intron | 25.0% |
!! | AATTAATAGGGTTTCACTTT+TGG | - | tig0020610:20449-20468 | None:intergenic | 25.0% |
!!! | AATTTTAGCTCTAACTATGA+TGG | + | tig0020610:20573-20592 | Msa1383620:intron | 25.0% |
! | TAATAACAAAATTCCTGTAC+AGG | + | tig0020610:20773-20792 | Msa1383620:CDS | 25.0% |
!! | AATGTTATTGATGATTCACA+TGG | + | tig0020610:21338-21357 | Msa1383620:CDS | 25.0% |
! | ATAAGCATCACTATATTCAA+TGG | - | tig0020610:21389-21408 | None:intergenic | 25.0% |
! | AATATAGTGATGCTTATTGT+TGG | + | tig0020610:21392-21411 | Msa1383620:CDS | 25.0% |
! | TGAAAAGAGATATACATAAC+AGG | - | tig0020610:21636-21655 | None:intergenic | 25.0% |
! | TTGTTCTAATAAAAGCAACA+AGG | - | tig0020610:21680-21699 | None:intergenic | 25.0% |
!!! | TTGTTGCTTTTATTAGAACA+AGG | + | tig0020610:21679-21698 | Msa1383620:intron | 25.0% |
!!! | ATAATAACTTTGAGGCTTTT+TGG | + | tig0020610:21822-21841 | Msa1383620:intron | 25.0% |
! | CTCTTAGTTTATAAGTTTGA+AGG | - | tig0020610:21908-21927 | None:intergenic | 25.0% |
!!! | ATATCATATGTTTTTGTCAG+AGG | - | tig0020610:22038-22057 | None:intergenic | 25.0% |
!! | AGCAACTCATTCAAATTTTA+AGG | + | tig0020610:22168-22187 | Msa1383620:CDS | 25.0% |
! | ATATTTAATTGCTTAACCAC+TGG | - | tig0020610:22432-22451 | None:intergenic | 25.0% |
! | TGGTTAAGCAATTAAATATG+TGG | + | tig0020610:22433-22452 | Msa1383620:intron | 25.0% |
! | GGTTAAGCAATTAAATATGT+GGG | + | tig0020610:22434-22453 | Msa1383620:intron | 25.0% |
! | AAATCATTTACGTAGTTGTA+GGG | - | tig0020610:22592-22611 | None:intergenic | 25.0% |
! | AAAATCATTTACGTAGTTGT+AGG | - | tig0020610:22593-22612 | None:intergenic | 25.0% |
!! | TTTTTATGCTTTTGCAGATA+TGG | + | tig0020610:22657-22676 | Msa1383620:intron | 25.0% |
! | TGCAGATATGGTTAAAAATA+AGG | + | tig0020610:22669-22688 | Msa1383620:intron | 25.0% |
! | GCAGATATGGTTAAAAATAA+GGG | + | tig0020610:22670-22689 | Msa1383620:intron | 25.0% |
!! | TAAAGAACCTGATATTGATT+CGG | + | tig0020610:22774-22793 | Msa1383620:CDS | 25.0% |
!!! | GTCTGCTCATTTTTAAATTT+TGG | + | tig0020610:23132-23151 | Msa1383620:intron | 25.0% |
!!! | TTTAAATTTTGGAGAAGAGT+TGG | + | tig0020610:23143-23162 | Msa1383620:intron | 25.0% |
! | AAACTTCACTAACCAATAAA+AGG | + | tig0020610:23174-23193 | Msa1383620:intron | 25.0% |
!! | TGTGTATTTCATCCTTTTAT+TGG | - | tig0020610:23189-23208 | None:intergenic | 25.0% |
! | AATACACACATATATATGCA+AGG | + | tig0020610:23201-23220 | Msa1383620:intron | 25.0% |
!! | AGAGTTGGTTAAAAAAATAC+TGG | + | tig0020610:23243-23262 | Msa1383620:intron | 25.0% |
! | GAATCTTGATTACATAGAAT+AGG | + | tig0020610:23361-23380 | Msa1383620:intron | 25.0% |
! | TATTTAACCTGTTTATCTCT+AGG | + | tig0020610:23595-23614 | Msa1383620:intron | 25.0% |
!! | TTTCAAGGCATTTATCTAAA+GGG | - | tig0020610:23677-23696 | None:intergenic | 25.0% |
! | GTGTAATTTATATGCATAGA+AGG | - | tig0020610:23824-23843 | None:intergenic | 25.0% |
! | AGTGTTAATCATTGGAATAT+GGG | + | tig0020610:23867-23886 | Msa1383620:intron | 25.0% |
!! | GTTTTCTCATTTCTCATATT+AGG | + | tig0020610:24530-24549 | Msa1383620:intron | 25.0% |
!!! | TTCTACTTTTATGATGACAT+TGG | + | tig0020610:24595-24614 | Msa1383620:intron | 25.0% |
!!! | ATATTTTTTTCACAATGCCA+TGG | + | tig0020610:24721-24740 | Msa1383620:CDS | 25.0% |
! | AAGACTTAAGGAAAATATGA+AGG | - | tig0020610:24784-24803 | None:intergenic | 25.0% |
! | GTCAGTTCATTAATTAAATC+TGG | + | tig0020610:24963-24982 | Msa1383620:intron | 25.0% |
!!! | TGAACATCACTATTTTTAAG+TGG | + | tig0020610:25361-25380 | Msa1383620:intron | 25.0% |
!!! | TTGGAAAGTACCATATATTT+AGG | + | tig0020610:25430-25449 | Msa1383620:intron | 25.0% |
! | AAGATGAAACTAAGATACAA+AGG | - | tig0020610:25495-25514 | None:intergenic | 25.0% |
! | TAAGTTGTAAACACTAATGA+GGG | - | tig0020610:25540-25559 | None:intergenic | 25.0% |
! | ATAAGTTGTAAACACTAATG+AGG | - | tig0020610:25541-25560 | None:intergenic | 25.0% |
!! | GAAGCATAGACAAATTTTAA+TGG | - | tig0020610:25778-25797 | None:intergenic | 25.0% |
!!! | ATCTCATATCTTTTGAGATA+AGG | - | tig0020610:25906-25925 | None:intergenic | 25.0% |
!! | ACCTATTCTATCTAGAATTT+GGG | + | tig0020610:25984-26003 | Msa1383620:intron | 25.0% |
!!! | CATTTTTTTTGCTACTGTTT+TGG | + | tig0020610:26081-26100 | Msa1383620:intron | 25.0% |
! | AACCACTAATGAGTTTATAT+AGG | - | tig0020610:26199-26218 | None:intergenic | 25.0% |
! | TTCATAATCACTAATCTATG+AGG | + | tig0020610:26263-26282 | Msa1383620:intron | 25.0% |
! | ATTAACACATAGAAATCATG+TGG | - | tig0020610:26682-26701 | None:intergenic | 25.0% |
! | TATGTGTTAATGATAGATGT+AGG | + | tig0020610:26691-26710 | Msa1383620:intron | 25.0% |
!!! | TATACACATTTTGGTATAGT+AGG | + | tig0020610:27007-27026 | Msa1383620:intron | 25.0% |
! | CATTAAAAATGTCCAACTTT+GGG | - | tig0020610:27132-27151 | None:intergenic | 25.0% |
! | ACATTAAAAATGTCCAACTT+TGG | - | tig0020610:27133-27152 | None:intergenic | 25.0% |
! | ATAAAGAAGTTAAGATTCTG+TGG | + | tig0020610:27319-27338 | Msa1383620:intron | 25.0% |
!!! | TAGATGTTTTAGGGTTATTA+CGG | + | tig0020610:27411-27430 | Msa1383620:intron | 25.0% |
! | ATAAATGGATATTGTTTGGT+CGG | - | tig0020610:27662-27681 | None:intergenic | 25.0% |
! | AACAACAACTTATGAAGAAA+TGG | - | tig0020610:27720-27739 | None:intergenic | 25.0% |
! | CGAAATATGATAGAACATTA+TGG | + | tig0020610:27845-27864 | Msa1383620:intron | 25.0% |
! | TTGTAAAAATAGCCAATCAT+GGG | - | tig0020610:28298-28317 | None:intergenic | 25.0% |
! | ATTGTAAAAATAGCCAATCA+TGG | - | tig0020610:28299-28318 | None:intergenic | 25.0% |
!! | ATTTTTACAATGTAAAGCAG+TGG | + | tig0020610:28308-28327 | Msa1383620:CDS | 25.0% |
! | TATTTACTAGGGATTCAAAA+AGG | - | tig0020610:28569-28588 | None:intergenic | 25.0% |
! | CAAACGATATCATATTTACT+AGG | - | tig0020610:28581-28600 | None:intergenic | 25.0% |
! | CTAGTAAATATGATATCGTT+TGG | + | tig0020610:28579-28598 | Msa1383620:intron | 25.0% |
!!! | CATAAGCTTGTTGTATATAA+GGG | - | tig0020610:28946-28965 | None:intergenic | 25.0% |
!!! | TCATAAGCTTGTTGTATATA+AGG | - | tig0020610:28947-28966 | None:intergenic | 25.0% |
!! | GCTTACACATATATTTGTTT+TGG | - | tig0020610:29019-29038 | None:intergenic | 25.0% |
! | AAGCTATACATCTATTCTAT+CGG | + | tig0020610:29035-29054 | Msa1383620:intron | 25.0% |
!!! | TCTCAATTGGAGTATTTTTA+GGG | - | tig0020610:29214-29233 | None:intergenic | 25.0% |
!! | TTTGGTTTATATTTGTTGGA+TGG | + | tig0020610:29466-29485 | Msa1383620:intron | 25.0% |
!! | TTGGTTTATATTTGTTGGAT+GGG | + | tig0020610:29467-29486 | Msa1383620:intron | 25.0% |
! | ATATTTGAGAAACAACTAGA+TGG | - | tig0020610:29770-29789 | None:intergenic | 25.0% |
!! | TCAAATATAGCTAGATGTTT+TGG | + | tig0020610:29782-29801 | Msa1383620:CDS | 25.0% |
!! | AAAGTGTTGGAATAGTTTGT+GGG | - | tig0020610:18711-18730 | None:intergenic | 30.0% |
!! | AAAAGTGTTGGAATAGTTTG+TGG | - | tig0020610:18712-18731 | None:intergenic | 30.0% |
AAGATGAACTTGAAGAAGAA+CGG | - | tig0020610:18864-18883 | None:intergenic | 30.0% | |
TCTGTTTCCAATGCTATTAA+CGG | + | tig0020610:18970-18989 | Msa1383620:CDS | 30.0% | |
GAAAGTAGTTCTTCAAAATC+AGG | + | tig0020610:18994-19013 | Msa1383620:CDS | 30.0% | |
AGCAAATGTATCATGTATTG+CGG | + | tig0020610:19506-19525 | Msa1383620:intron | 30.0% | |
!! | AAAGTAGTTTTACATTAGGC+GGG | + | tig0020610:19674-19693 | Msa1383620:intron | 30.0% |
GTGATTACATAAGTCAATAC+AGG | + | tig0020610:19740-19759 | Msa1383620:intron | 30.0% | |
!!! | GACTACCGTTTTTTTTACAA+TGG | - | tig0020610:19806-19825 | None:intergenic | 30.0% |
ATTAAGGTGAAGTGAATTCT+TGG | + | tig0020610:19846-19865 | Msa1383620:intron | 30.0% | |
ATTCGGTACTTCTCTAATAA+AGG | - | tig0020610:20226-20245 | None:intergenic | 30.0% | |
AGAAGAAATGTCAAGATCAT+AGG | - | tig0020610:20271-20290 | None:intergenic | 30.0% | |
ATTAAAATTCAGAGGGAACA+TGG | - | tig0020610:20489-20508 | None:intergenic | 30.0% | |
!! | TTTGTTTTCTGCCTGTATTT+AGG | + | tig0020610:20597-20616 | Msa1383620:intron | 30.0% |
! | TGACTCTATTTTATCTCCAT+GGG | - | tig0020610:20673-20692 | None:intergenic | 30.0% |
! | TTGACTCTATTTTATCTCCA+TGG | - | tig0020610:20674-20693 | None:intergenic | 30.0% |
AAGTCCAAGTAAGTTTAAGT+TGG | + | tig0020610:20692-20711 | Msa1383620:CDS | 30.0% | |
CTTTCCAACTTAAACTTACT+TGG | - | tig0020610:20699-20718 | None:intergenic | 30.0% | |
!! | CAAGTAAGTTTAAGTTGGAA+AGG | + | tig0020610:20697-20716 | Msa1383620:CDS | 30.0% |
AAACATAAGGGGAAAACAAA+AGG | - | tig0020610:20835-20854 | None:intergenic | 30.0% | |
ACATGTTTCCACAAACATAA+GGG | - | tig0020610:20847-20866 | None:intergenic | 30.0% | |
TTTGTGGAAACATGTCTATA+TGG | + | tig0020610:20852-20871 | Msa1383620:intron | 30.0% | |
AAATTCTCGTTATGTTTGGA+TGG | + | tig0020610:20955-20974 | Msa1383620:intron | 30.0% | |
ATGGTGATAAAACTTTGAGT+GGG | - | tig0020610:21101-21120 | None:intergenic | 30.0% | |
TATGGTGATAAAACTTTGAG+TGG | - | tig0020610:21102-21121 | None:intergenic | 30.0% | |
! | AACAATAAAGATGGTGATGA+TGG | - | tig0020610:21189-21208 | None:intergenic | 30.0% |
AATGTGATGTATGGTCTTTA+TGG | + | tig0020610:21542-21561 | Msa1383620:intron | 30.0% | |
TTCCAACTATTGGACTAATT+GGG | - | tig0020610:21733-21752 | None:intergenic | 30.0% | |
ATTCCAACTATTGGACTAAT+TGG | - | tig0020610:21734-21753 | None:intergenic | 30.0% | |
GAATGCAAAATTCCAACTAT+TGG | - | tig0020610:21743-21762 | None:intergenic | 30.0% | |
!!! | TGCTGTATTTTAAGTTAGCT+TGG | + | tig0020610:21955-21974 | Msa1383620:intron | 30.0% |
TTCTTCTTCTAGTGTTTGAT+TGG | + | tig0020610:22283-22302 | Msa1383620:intron | 30.0% | |
!! | TCTCCAATGTGTTTTTGTTT+GGG | + | tig0020610:22348-22367 | Msa1383620:intron | 30.0% |
TTTCCCAAACAAAAACACAT+TGG | - | tig0020610:22354-22373 | None:intergenic | 30.0% | |
!! | TGTGTTTTTGTTTGGGAAAA+TGG | + | tig0020610:22355-22374 | Msa1383620:intron | 30.0% |
!! | TTTTTGTTTGGGAAAATGGT+AGG | + | tig0020610:22359-22378 | Msa1383620:intron | 30.0% |
! | TTTGCAAGCACAAATTTTTG+TGG | + | tig0020610:22391-22410 | Msa1383620:intron | 30.0% |
GTTAGAAATATTAACTCCAG+TGG | + | tig0020610:22413-22432 | Msa1383620:intron | 30.0% | |
! | TTCATTTGATTTCTCTGAAC+AGG | - | tig0020610:22724-22743 | None:intergenic | 30.0% |
!! | AAAGAACCTGATATTGATTC+GGG | + | tig0020610:22775-22794 | Msa1383620:CDS | 30.0% |
! | ATGATTGCATCTGCTTTAAA+GGG | - | tig0020610:22805-22824 | None:intergenic | 30.0% |
! | AAGAAAGTATACCATATGCT+GGG | - | tig0020610:22837-22856 | None:intergenic | 30.0% |
ATGAAATATTTAGGCAGAGT+TGG | + | tig0020610:23228-23247 | Msa1383620:intron | 30.0% | |
TCTACCCAAACATATCTTAT+GGG | + | tig0020610:23554-23573 | Msa1383620:intron | 30.0% | |
GATTCCCATAAGATATGTTT+GGG | - | tig0020610:23561-23580 | None:intergenic | 30.0% | |
AGATTCCCATAAGATATGTT+TGG | - | tig0020610:23562-23581 | None:intergenic | 30.0% | |
ACATATCTTATGGGAATCTA+TGG | + | tig0020610:23563-23582 | Msa1383620:intron | 30.0% | |
! | TTCAAGGCATTTATCTAAAG+GGG | - | tig0020610:23676-23695 | None:intergenic | 30.0% |
! | GTTTCAAGGCATTTATCTAA+AGG | - | tig0020610:23678-23697 | None:intergenic | 30.0% |
ACATCTATTCAAGTGTTTCA+AGG | - | tig0020610:23692-23711 | None:intergenic | 30.0% | |
AGTAGACAAATTGATATGCT+CGG | + | tig0020610:23724-23743 | Msa1383620:intron | 30.0% | |
AGAACAAACTCTTGAGTTAT+TGG | - | tig0020610:23780-23799 | None:intergenic | 30.0% | |
TGCATATAAATTACACCCTA+AGG | + | tig0020610:23828-23847 | Msa1383620:intron | 30.0% | |
CATTATGCAGTGTTAATCAT+TGG | + | tig0020610:23859-23878 | Msa1383620:intron | 30.0% | |
CAGTGTTAATCATTGGAATA+TGG | + | tig0020610:23866-23885 | Msa1383620:intron | 30.0% | |
AGCAAAACTGAAATTGCATA+TGG | - | tig0020610:23926-23945 | None:intergenic | 30.0% | |
ACTTGCATAAGGACTAATTT+AGG | + | tig0020610:23949-23968 | Msa1383620:intron | 30.0% | |
TAGGGTAAATTTATGGTATC+TGG | - | tig0020610:24111-24130 | None:intergenic | 30.0% | |
TGGATGATAGGGTAAATTTA+TGG | - | tig0020610:24118-24137 | None:intergenic | 30.0% | |
AGTACATAAGTCTTTACAGT+GGG | + | tig0020610:24137-24156 | Msa1383620:intron | 30.0% | |
! | GCAGGCTAAATATTTGAAAT+AGG | + | tig0020610:24177-24196 | Msa1383620:intron | 30.0% |
! | GCTTTATTACCATATAGAGT+TGG | + | tig0020610:24321-24340 | Msa1383620:intron | 30.0% |
ATTACCATATAGAGTTGGAT+AGG | + | tig0020610:24326-24345 | Msa1383620:intron | 30.0% | |
CTAACTAATCTGCTAGAATT+CGG | + | tig0020610:24354-24373 | Msa1383620:intron | 30.0% | |
TAACTAATCTGCTAGAATTC+GGG | + | tig0020610:24355-24374 | Msa1383620:intron | 30.0% | |
CAATAAACTTCAATCACAAG+GGG | - | tig0020610:24860-24879 | None:intergenic | 30.0% | |
GCAATAAACTTCAATCACAA+GGG | - | tig0020610:24861-24880 | None:intergenic | 30.0% | |
TGCAATAAACTTCAATCACA+AGG | - | tig0020610:24862-24881 | None:intergenic | 30.0% | |
!! | GTATTTTATCTTTTTCACCC+AGG | + | tig0020610:24883-24902 | Msa1383620:intron | 30.0% |
TATGGTTGCAAAAAATTAGC+TGG | - | tig0020610:24999-25018 | None:intergenic | 30.0% | |
!! | AAATAGTCGACTCGTTAATT+TGG | + | tig0020610:25063-25082 | Msa1383620:CDS | 30.0% |
GAGACATGATTAATGATCTT+CGG | + | tig0020610:25096-25115 | Msa1383620:CDS | 30.0% | |
ACATTCCTCATGCATATATA+TGG | + | tig0020610:25180-25199 | Msa1383620:CDS | 30.0% | |
AAAACCAGATTATAAGGTGA+AGG | - | tig0020610:25577-25596 | None:intergenic | 30.0% | |
CTCAACAAAACCAGATTATA+AGG | - | tig0020610:25583-25602 | None:intergenic | 30.0% | |
AATCTTAATAGAGTTTGGGT+TGG | + | tig0020610:25813-25832 | Msa1383620:intron | 30.0% | |
! | ATCTTAATAGAGTTTGGGTT+GGG | + | tig0020610:25814-25833 | Msa1383620:intron | 30.0% |
TGAACATAAGTTTACAAGTG+GGG | - | tig0020610:25881-25900 | None:intergenic | 30.0% | |
CTGAACATAAGTTTACAAGT+GGG | - | tig0020610:25882-25901 | None:intergenic | 30.0% | |
TCTGAACATAAGTTTACAAG+TGG | - | tig0020610:25883-25902 | None:intergenic | 30.0% | |
! | GACCTATTCTATCTAGAATT+TGG | + | tig0020610:25983-26002 | Msa1383620:intron | 30.0% |
ACCCAAATTCTAGATAGAAT+AGG | - | tig0020610:25988-26007 | None:intergenic | 30.0% | |
CAGTAGCAAAAAAAATGTTC+TGG | - | tig0020610:26078-26097 | None:intergenic | 30.0% | |
AGCCTATATAAACTCATTAG+TGG | + | tig0020610:26194-26213 | Msa1383620:intron | 30.0% | |
ATAATGCATATACTTCAGCT+TGG | + | tig0020610:26324-26343 | Msa1383620:intron | 30.0% | |
TAATGCATATACTTCAGCTT+GGG | + | tig0020610:26325-26344 | Msa1383620:intron | 30.0% | |
GACCAAAAATTGATGTAGTA+GGG | + | tig0020610:26518-26537 | Msa1383620:CDS | 30.0% | |
! | AACCCTACTACATCAATTTT+TGG | - | tig0020610:26523-26542 | None:intergenic | 30.0% |
TGATGATTACTTATTCCGAA+GGG | - | tig0020610:26847-26866 | None:intergenic | 30.0% | |
ATGATGATTACTTATTCCGA+AGG | - | tig0020610:26848-26867 | None:intergenic | 30.0% | |
TTCGGAATAAGTAATCATCA+TGG | + | tig0020610:26847-26866 | Msa1383620:intron | 30.0% | |
! | AAGTAATCATCATGGCTTTT+TGG | + | tig0020610:26855-26874 | Msa1383620:intron | 30.0% |
! | AACCAAAAATGACGGAAAAA+GGG | - | tig0020610:26953-26972 | None:intergenic | 30.0% |
! | TAACCAAAAATGACGGAAAA+AGG | - | tig0020610:26954-26973 | None:intergenic | 30.0% |
GGTGTATTACAGATTAAGAA+TGG | - | tig0020610:27201-27220 | None:intergenic | 30.0% | |
TTATTTACAGAAAAGTCTCC+AGG | - | tig0020610:27303-27322 | None:intergenic | 30.0% | |
! | AATTTTGTGGTCCTTTTTGT+TGG | + | tig0020610:27359-27378 | Msa1383620:intron | 30.0% |
! | TCAGGATGTTTAGATGTTTT+AGG | + | tig0020610:27401-27420 | Msa1383620:intron | 30.0% |
! | CAGGATGTTTAGATGTTTTA+GGG | + | tig0020610:27402-27421 | Msa1383620:intron | 30.0% |
!!! | AGATGTTTTAGGGTTATTAC+GGG | + | tig0020610:27412-27431 | Msa1383620:intron | 30.0% |
AACTTATGAAGAAATGGTCA+TGG | - | tig0020610:27714-27733 | None:intergenic | 30.0% | |
!! | AGTTTTTGATTGTCAGTTTC+TGG | + | tig0020610:27761-27780 | Msa1383620:intron | 30.0% |
AACTACAATAACGATAACCA+AGG | - | tig0020610:27912-27931 | None:intergenic | 30.0% | |
! | TTATTGTAGTTTTCTTGTCG+AGG | + | tig0020610:27921-27940 | Msa1383620:intron | 30.0% |
AGTATATATAAAGAGAGGGA+GGG | - | tig0020610:28036-28055 | None:intergenic | 30.0% | |
AAGTATATATAAAGAGAGGG+AGG | - | tig0020610:28037-28056 | None:intergenic | 30.0% | |
!!! | ATCTTTTTTGGATCTTGAAC+AGG | - | tig0020610:28078-28097 | None:intergenic | 30.0% |
! | ACAAATAATTGTAGAAGCAC+TGG | + | tig0020610:28101-28120 | Msa1383620:CDS | 30.0% |
AACAAGTATATAGAGTCCTT+TGG | - | tig0020610:28264-28283 | None:intergenic | 30.0% | |
AAAGGACTCTATATACTTGT+TGG | + | tig0020610:28263-28282 | Msa1383620:CDS | 30.0% | |
TGTAAAAATAGCCAATCATG+GGG | - | tig0020610:28297-28316 | None:intergenic | 30.0% | |
! | ATCATCTAGTTCAATACTCT+TGG | + | tig0020610:28335-28354 | Msa1383620:intron | 30.0% |
ATCACCAAAAAAAGGAACTA+TGG | - | tig0020610:28649-28668 | None:intergenic | 30.0% | |
TTTATGGCATCAATCAACTT+AGG | - | tig0020610:28747-28766 | None:intergenic | 30.0% | |
GGGATCTAGCATAAAATTTA+TGG | - | tig0020610:28763-28782 | None:intergenic | 30.0% | |
! | AAATTTTATGCTAGATCCCA+AGG | + | tig0020610:28764-28783 | Msa1383620:CDS | 30.0% |
TGAGATGAAATTCAGTAGTT+CGG | - | tig0020610:28980-28999 | None:intergenic | 30.0% | |
CAAAGACTTCTGACAAATTT+GGG | + | tig0020610:29159-29178 | Msa1383620:intron | 30.0% | |
TGACAAATTTGGGTAAAACA+AGG | + | tig0020610:29169-29188 | Msa1383620:intron | 30.0% | |
!! | CTCTCAATTGGAGTATTTTT+AGG | - | tig0020610:29215-29234 | None:intergenic | 30.0% |
AAAAATACTCCAATTGAGAG+TGG | + | tig0020610:29215-29234 | Msa1383620:intron | 30.0% | |
AGAAATGTAAAGTGACAACA+GGG | - | tig0020610:29310-29329 | None:intergenic | 30.0% | |
TAGAAATGTAAAGTGACAAC+AGG | - | tig0020610:29311-29330 | None:intergenic | 30.0% | |
! | TTGCAGTAGATTTTCTACAA+AGG | + | tig0020610:29333-29352 | Msa1383620:intron | 30.0% |
!! | GGTTTTATATTTACATTGCG+TGG | + | tig0020610:29506-29525 | Msa1383620:intron | 30.0% |
TAACTGCTCATTATACTTCT+AGG | + | tig0020610:29622-29641 | Msa1383620:intron | 30.0% | |
CTCATTATACTTCTAGGTAA+AGG | + | tig0020610:29628-29647 | Msa1383620:intron | 30.0% | |
!! | AAAGAACAAAAGCATTACAC+AGG | - | tig0020610:29983-30002 | None:intergenic | 30.0% |
TAATTAAGTGTATGCCAAGT+TGG | + | tig0020610:30079-30098 | Msa1383620:three_prime_UTR | 30.0% | |
ATACCTAAACTAAACCAACT+TGG | - | tig0020610:30096-30115 | None:intergenic | 30.0% | |
TGCTAATATTCTATGTGGTG+CGG | - | tig0020610:18678-18697 | None:intergenic | 35.0% | |
!! | GAAGGTGCTAATATTCTATG+TGG | - | tig0020610:18683-18702 | None:intergenic | 35.0% |
!! | AAGTGTTGGAATAGTTTGTG+GGG | - | tig0020610:18710-18729 | None:intergenic | 35.0% |
AAATTCGTTGCACGGTTATA+GGG | - | tig0020610:18768-18787 | None:intergenic | 35.0% | |
TAAATTCGTTGCACGGTTAT+AGG | - | tig0020610:18769-18788 | None:intergenic | 35.0% | |
TATAACCGTGCAACGAATTT+AGG | + | tig0020610:18768-18787 | Msa1383620:five_prime_UTR | 35.0% | |
AGTATTATCCACAACTTCCT+TGG | - | tig0020610:18947-18966 | None:intergenic | 35.0% | |
ACTTTCACCGTTAATAGCAT+TGG | - | tig0020610:18980-18999 | None:intergenic | 35.0% | |
GCAAATGTATCATGTATTGC+GGG | + | tig0020610:19507-19526 | Msa1383620:intron | 35.0% | |
! | AACGGTAGTCTTTTATTAGG+TGG | + | tig0020610:19816-19835 | Msa1383620:intron | 35.0% |
ATTTCTTCTGCAACATAAGC+TGG | + | tig0020610:20282-20301 | Msa1383620:intron | 35.0% | |
CAAAATTCCTGTACAGGAAA+AGG | + | tig0020610:20779-20798 | Msa1383620:CDS | 35.0% | |
! | TTGTTTTCCCCTTATGTTTG+TGG | + | tig0020610:20836-20855 | Msa1383620:intron | 35.0% |
CATGTTTCCACAAACATAAG+GGG | - | tig0020610:20846-20865 | None:intergenic | 35.0% | |
GACATGTTTCCACAAACATA+AGG | - | tig0020610:20848-20867 | None:intergenic | 35.0% | |
TGGTCGGTAGAAACAAAAAA+AGG | - | tig0020610:21169-21188 | None:intergenic | 35.0% | |
!! | ATAAAGATGGTGATGATGGT+CGG | - | tig0020610:21185-21204 | None:intergenic | 35.0% |
GCATCACTATATTCAATGGA+GGG | - | tig0020610:21385-21404 | None:intergenic | 35.0% | |
AGCATCACTATATTCAATGG+AGG | - | tig0020610:21386-21405 | None:intergenic | 35.0% | |
AACGCTTACAGGTATAGTAA+TGG | + | tig0020610:21453-21472 | Msa1383620:intron | 35.0% | |
GAAGGACGAAAAGAGATATT+TGG | - | tig0020610:21495-21514 | None:intergenic | 35.0% | |
ATCCCAATTAGTCCAATAGT+TGG | + | tig0020610:21728-21747 | Msa1383620:intron | 35.0% | |
CGCTTGACATAATAACTTTG+AGG | + | tig0020610:21814-21833 | Msa1383620:intron | 35.0% | |
TAGAAGAAGAAACTGCAGTT+GGG | - | tig0020610:22274-22293 | None:intergenic | 35.0% | |
!! | CTCTCCAATGTGTTTTTGTT+TGG | + | tig0020610:22347-22366 | Msa1383620:intron | 35.0% |
CTTAAAAATGTGCTGTGTCA+TGG | + | tig0020610:22524-22543 | Msa1383620:intron | 35.0% | |
AAATAAGGGCTTTCTTCCAT+CGG | + | tig0020610:22684-22703 | Msa1383620:CDS | 35.0% | |
ATATCAGGTTCTTTACATGC+AGG | - | tig0020610:22769-22788 | None:intergenic | 35.0% | |
!! | TGATTGCATCTGCTTTAAAG+GGG | - | tig0020610:22804-22823 | None:intergenic | 35.0% |
CATGATTGCATCTGCTTTAA+AGG | - | tig0020610:22806-22825 | None:intergenic | 35.0% | |
!! | CTTTAAAGCAGATGCAATCA+TGG | + | tig0020610:22804-22823 | Msa1383620:CDS | 35.0% |
! | AGAAAGTATACCATATGCTG+GGG | - | tig0020610:22836-22855 | None:intergenic | 35.0% |
! | CAAGAAAGTATACCATATGC+TGG | - | tig0020610:22838-22857 | None:intergenic | 35.0% |
CACACATATATATGCAAGGA+CGG | + | tig0020610:23205-23224 | Msa1383620:intron | 35.0% | |
CAAGGACGGATGAAATATTT+AGG | + | tig0020610:23219-23238 | Msa1383620:intron | 35.0% | |
! | GTTTTTATCGCTTACGGTAT+AGG | - | tig0020610:23473-23492 | None:intergenic | 35.0% |
CTCTACCCAAACATATCTTA+TGG | + | tig0020610:23553-23572 | Msa1383620:intron | 35.0% | |
GAGATTTCCTAGAGATAAAC+AGG | - | tig0020610:23605-23624 | None:intergenic | 35.0% | |
AAATTACACCCTAAGGAGTA+AGG | + | tig0020610:23835-23854 | Msa1383620:intron | 35.0% | |
CATAATGTCCTTACTCCTTA+GGG | - | tig0020610:23846-23865 | None:intergenic | 35.0% | |
!!! | GTTTTGCTGTTACTTGCATA+AGG | + | tig0020610:23938-23957 | Msa1383620:intron | 35.0% |
AGGACAATCTATCATGTGAT+CGG | + | tig0020610:23969-23988 | Msa1383620:intron | 35.0% | |
TCAGTTTGGTACTAAGAAGA+AGG | + | tig0020610:24027-24046 | Msa1383620:intron | 35.0% | |
CAGTTTGGTACTAAGAAGAA+GGG | + | tig0020610:24028-24047 | Msa1383620:intron | 35.0% | |
GACTTATGTACTGGATGATA+GGG | - | tig0020610:24129-24148 | None:intergenic | 35.0% | |
AGACTTATGTACTGGATGAT+AGG | - | tig0020610:24130-24149 | None:intergenic | 35.0% | |
CACTGTAAAGACTTATGTAC+TGG | - | tig0020610:24138-24157 | None:intergenic | 35.0% | |
CAGTACATAAGTCTTTACAG+TGG | + | tig0020610:24136-24155 | Msa1383620:intron | 35.0% | |
GATTGTAAATGATGAGTTGC+AGG | + | tig0020610:24159-24178 | Msa1383620:intron | 35.0% | |
CTTTCCTATCCAACTCTATA+TGG | - | tig0020610:24333-24352 | None:intergenic | 35.0% | |
ATCTCTTTCACATTTCTTGC+TGG | + | tig0020610:24559-24578 | Msa1383620:intron | 35.0% | |
AGTGTCAGTAGCAAAAACAA+TGG | - | tig0020610:24644-24663 | None:intergenic | 35.0% | |
TAAAGCAACAAGCTGGTTAT+AGG | + | tig0020610:24940-24959 | Msa1383620:CDS | 35.0% | |
AAAGCAACAAGCTGGTTATA+GGG | + | tig0020610:24941-24960 | Msa1383620:CDS | 35.0% | |
ACATATTTAAGTGGCTCACA+AGG | + | tig0020610:25146-25165 | Msa1383620:CDS | 35.0% | |
! | TTTGGTTTAGGAACAAGATG+AGG | - | tig0020610:25209-25228 | None:intergenic | 35.0% |
CATCTTGTTCCTAAACCAAA+AGG | + | tig0020610:25209-25228 | Msa1383620:CDS | 35.0% | |
!!! | AAGTAACCACCTTTTGGTTT+AGG | - | tig0020610:25221-25240 | None:intergenic | 35.0% |
ACAACCTTCACCTTATAATC+TGG | + | tig0020610:25570-25589 | Msa1383620:intron | 35.0% | |
! | AGTCTATCCTCGATTTGTAT+TGG | + | tig0020610:25636-25655 | Msa1383620:intron | 35.0% |
! | GTCTATCCTCGATTTGTATT+GGG | + | tig0020610:25637-25656 | Msa1383620:intron | 35.0% |
TCTTAAGCATGGAGAAATGT+GGG | - | tig0020610:25710-25729 | None:intergenic | 35.0% | |
! | TCCTACAAAACTAGCTTGTA+AGG | + | tig0020610:25846-25865 | Msa1383620:intron | 35.0% |
!!! | ACCTTACAAGCTAGTTTTGT+AGG | - | tig0020610:25850-25869 | None:intergenic | 35.0% |
ATGAGATTTAACTCACGTCT+AGG | + | tig0020610:25919-25938 | Msa1383620:intron | 35.0% | |
AGCCCATTAGTTCATTAATC+AGG | + | tig0020610:26155-26174 | Msa1383620:intron | 35.0% | |
GGCCTGATTAATGAACTAAT+GGG | - | tig0020610:26160-26179 | None:intergenic | 35.0% | |
ATAGGCTATTCTGACCTAAT+GGG | - | tig0020610:26181-26200 | None:intergenic | 35.0% | |
TATAGGCTATTCTGACCTAA+TGG | - | tig0020610:26182-26201 | None:intergenic | 35.0% | |
TAAACTCATTAGTGGTTGAC+TGG | + | tig0020610:26202-26221 | Msa1383620:intron | 35.0% | |
AATGCATATACTTCAGCTTG+GGG | + | tig0020610:26326-26345 | Msa1383620:intron | 35.0% | |
GGACCAAAAATTGATGTAGT+AGG | + | tig0020610:26517-26536 | Msa1383620:CDS | 35.0% | |
!! | AAGCCATTTTACAAGAGACT+CGG | - | tig0020610:26581-26600 | None:intergenic | 35.0% |
CTTGTAAAATGGCTTGAAGA+TGG | + | tig0020610:26586-26605 | Msa1383620:CDS | 35.0% | |
CTACCAAACCCAATGTAAAT+CGG | - | tig0020610:26619-26638 | None:intergenic | 35.0% | |
TGCAAATAAATACACTCACC+AGG | - | tig0020610:26642-26661 | None:intergenic | 35.0% | |
TGTAGTCAATAGCATGCTAT+AGG | + | tig0020610:26729-26748 | Msa1383620:intron | 35.0% | |
! | TAGCATGCTATAGGCTTTAT+CGG | + | tig0020610:26738-26757 | Msa1383620:intron | 35.0% |
TAGACAATAGTAGAGTGGTT+TGG | + | tig0020610:26778-26797 | Msa1383620:intron | 35.0% | |
!! | AATCATCATGGCTTTTTGGT+TGG | + | tig0020610:26859-26878 | Msa1383620:intron | 35.0% |
!!! | ATCATCATGGCTTTTTGGTT+GGG | + | tig0020610:26860-26879 | Msa1383620:intron | 35.0% |
!!! | CTTTTTGGTTGGGGTATTTT+AGG | + | tig0020610:26870-26889 | Msa1383620:intron | 35.0% |
AAAAACACCAAAGCAGTTCT+AGG | + | tig0020610:26906-26925 | Msa1383620:intron | 35.0% | |
AAAACACCAAAGCAGTTCTA+GGG | + | tig0020610:26907-26926 | Msa1383620:intron | 35.0% | |
AGTGTTATCAATCCCCAATA+GGG | - | tig0020610:27078-27097 | None:intergenic | 35.0% | |
GCAAGCTAACAATGAAAAGT+AGG | - | tig0020610:27222-27241 | None:intergenic | 35.0% | |
CAAGTCTGTTAGTTGTTGAT+GGG | + | tig0020610:27254-27273 | Msa1383620:intron | 35.0% | |
!! | TAGTTGTTGATGGGCTATAT+CGG | + | tig0020610:27263-27282 | Msa1383620:intron | 35.0% |
TAAAGATCCTCACATCTCTT+TGG | + | tig0020610:27441-27460 | Msa1383620:intron | 35.0% | |
! | AGTTTTCTTGTCGTAACTCT+CGG | + | tig0020610:27511-27530 | Msa1383620:intron | 35.0% |
! | ACCGACACTTTTATATGGTA+CGG | + | tig0020610:27545-27564 | Msa1383620:intron | 35.0% |
! | TCCGTACCATATAAAAGTGT+CGG | - | tig0020610:27549-27568 | None:intergenic | 35.0% |
! | TTTTATATGGTACGGAGTGT+TGG | + | tig0020610:27553-27572 | Msa1383620:intron | 35.0% |
! | TTTATATGGTACGGAGTGTT+GGG | + | tig0020610:27554-27573 | Msa1383620:intron | 35.0% |
AGATATACAAAAGCAAGGAG+AGG | - | tig0020610:27952-27971 | None:intergenic | 35.0% | |
GCAAGAGATATACAAAAGCA+AGG | - | tig0020610:27957-27976 | None:intergenic | 35.0% | |
TATATATAAAGAGAGGGAGG+GGG | - | tig0020610:28034-28053 | None:intergenic | 35.0% | |
GTATATATAAAGAGAGGGAG+GGG | - | tig0020610:28035-28054 | None:intergenic | 35.0% | |
AGGCATCATCAATAAAGGAT+GGG | + | tig0020610:28140-28159 | Msa1383620:CDS | 35.0% | |
!!! | CATTTTTTGTAGGTGCATCA+TGG | + | tig0020610:28493-28512 | Msa1383620:intron | 35.0% |
AAAAAGGAACTATGGTCGTT+GGG | - | tig0020610:28641-28660 | None:intergenic | 35.0% | |
AAAAAAGGAACTATGGTCGT+TGG | - | tig0020610:28642-28661 | None:intergenic | 35.0% | |
!!! | ACGACCATAGTTCCTTTTTT+TGG | + | tig0020610:28642-28661 | Msa1383620:CDS | 35.0% |
! | AAGGGTTGATCACCAAAAAA+AGG | - | tig0020610:28657-28676 | None:intergenic | 35.0% |
!! | TTTTTGGTGATCAACCCTTT+TGG | + | tig0020610:28658-28677 | Msa1383620:CDS | 35.0% |
!! | TTTTGGTGATCAACCCTTTT+GGG | + | tig0020610:28659-28678 | Msa1383620:CDS | 35.0% |
TGTGTATCAGCCAAATGAAA+CGG | + | tig0020610:28818-28837 | Msa1383620:intron | 35.0% | |
GCTTCTTTCAGAAGTAGATT+CGG | + | tig0020610:28845-28864 | Msa1383620:intron | 35.0% | |
AGATTCGGAGGATAAATTTC+TGG | + | tig0020610:28860-28879 | Msa1383620:intron | 35.0% | |
ACATCTATTCTATCGGCATT+AGG | + | tig0020610:29042-29061 | Msa1383620:intron | 35.0% | |
TTGTCAGAAGTCTTTGGATT+AGG | - | tig0020610:29155-29174 | None:intergenic | 35.0% | |
CCAAATTTGTCAGAAGTCTT+TGG | - | tig0020610:29161-29180 | None:intergenic | 35.0% | |
CCAAAGACTTCTGACAAATT+TGG | + | tig0020610:29158-29177 | Msa1383620:intron | 35.0% | |
!! | TTTCGATGCTGATTTGTCAT+TGG | - | tig0020610:29250-29269 | None:intergenic | 35.0% |
!! | TACAAAGGCAAACTGCTTTT+CGG | + | tig0020610:29348-29367 | Msa1383620:intron | 35.0% |
! | ATGGGCTGATGTATTTAGAT+AGG | + | tig0020610:29485-29504 | Msa1383620:intron | 35.0% |
! | GGTTTACACCTCAAATTTTG+AGG | - | tig0020610:29532-29551 | None:intergenic | 35.0% |
! | GTGTAAACCAATCTCAGTTT+TGG | + | tig0020610:29543-29562 | Msa1383620:intron | 35.0% |
AATGCAACCAAAACTGAGAT+TGG | - | tig0020610:29553-29572 | None:intergenic | 35.0% | |
!!! | GTTTTGGTTGCATTCTTTCT+TGG | + | tig0020610:29559-29578 | Msa1383620:intron | 35.0% |
!! | CATTCTTTCTTGGTTCTGTT+TGG | + | tig0020610:29569-29588 | Msa1383620:intron | 35.0% |
AATTGAACTTGCCAAAGCTA+TGG | + | tig0020610:29658-29677 | Msa1383620:CDS | 35.0% | |
! | ATCCTCATTTTCCATAGCTT+TGG | - | tig0020610:29672-29691 | None:intergenic | 35.0% |
AAAGCTATGGAAAATGAGGA+TGG | + | tig0020610:29671-29690 | Msa1383620:CDS | 35.0% | |
AAGCTATGGAAAATGAGGAT+GGG | + | tig0020610:29672-29691 | Msa1383620:CDS | 35.0% | |
GTACAGAGATTGAAAAACAG+TGG | - | tig0020610:29841-29860 | None:intergenic | 35.0% | |
! | AAAGCATTACACAGGTACAA+GGG | - | tig0020610:29975-29994 | None:intergenic | 35.0% |
!! | AAAAGCATTACACAGGTACA+AGG | - | tig0020610:29976-29995 | None:intergenic | 35.0% |
!! | ATGCCAAGTTGGTTTAGTTT+AGG | + | tig0020610:30090-30109 | Msa1383620:three_prime_UTR | 35.0% |
! | AATAGTTTGTGGGGTGAAGA+AGG | - | tig0020610:18701-18720 | None:intergenic | 40.0% |
AATTCGTTGCACGGTTATAG+GGG | - | tig0020610:18767-18786 | None:intergenic | 40.0% | |
ATGAACTTGAAGAAGAACGG+CGG | - | tig0020610:18861-18880 | None:intergenic | 40.0% | |
ATCTTCTTCAAGCGATCGAT+CGG | + | tig0020610:18879-18898 | Msa1383620:CDS | 40.0% | |
AAGGTGAAGTGAATTCTTGG+AGG | + | tig0020610:19849-19868 | Msa1383620:intron | 40.0% | |
AATTTGCATGTCCGCCAAAA+TGG | + | tig0020610:20025-20044 | Msa1383620:intron | 40.0% | |
! | AATGTCTGCCTTGACCATTT+TGG | - | tig0020610:20042-20061 | None:intergenic | 40.0% |
TATTTCTTCACGGAGAAGCA+TGG | - | tig0020610:20346-20365 | None:intergenic | 40.0% | |
TGGAAAGGTCAAAAACAGAG+CGG | + | tig0020610:20712-20731 | Msa1383620:CDS | 40.0% | |
AAAATTTGTGCTGCATCCTC+AGG | - | tig0020610:20753-20772 | None:intergenic | 40.0% | |
! | TAGCATACCTTTTCCTGTAC+AGG | - | tig0020610:20789-20808 | None:intergenic | 40.0% |
GTGGAAACATGTCTATATGG+TGG | + | tig0020610:20855-20874 | Msa1383620:intron | 40.0% | |
TATGTTTGGATGGAGAGATG+TGG | + | tig0020610:20965-20984 | Msa1383620:intron | 40.0% | |
ATAGCTACCGTAAAAGACGA+CGG | + | tig0020610:21245-21264 | Msa1383620:CDS | 40.0% | |
! | TACAGTTCCGTCGTCTTTTA+CGG | - | tig0020610:21255-21274 | None:intergenic | 40.0% |
GCATCAGGTTCAACATCTAT+GGG | - | tig0020610:21290-21309 | None:intergenic | 40.0% | |
AGCATCAGGTTCAACATCTA+TGG | - | tig0020610:21291-21310 | None:intergenic | 40.0% | |
TCAATGGAGGGATGTAATCA+AGG | - | tig0020610:21373-21392 | None:intergenic | 40.0% | |
ATGCTTATTGTTGGTACACG+AGG | + | tig0020610:21401-21420 | Msa1383620:CDS | 40.0% | |
! | CGTTTTCCTATTGCGACAAA+TGG | - | tig0020610:21437-21456 | None:intergenic | 40.0% |
GCTTACAGGTATAGTAATGG+TGG | + | tig0020610:21456-21475 | Msa1383620:intron | 40.0% | |
GTTCATGGGAATGTGATGTA+TGG | + | tig0020610:21533-21552 | Msa1383620:intron | 40.0% | |
GAGTTGCTAATCTAACACGA+TGG | - | tig0020610:22156-22175 | None:intergenic | 40.0% | |
!!! | AAGGAGTTTGTTTTGACAGC+TGG | + | tig0020610:22187-22206 | Msa1383620:CDS | 40.0% |
!!! | AGGAGTTTGTTTTGACAGCT+GGG | + | tig0020610:22188-22207 | Msa1383620:CDS | 40.0% |
!! | GGTTGGAGTTTTATCCGTTA+GGG | + | tig0020610:22209-22228 | Msa1383620:CDS | 40.0% |
!! | GTTGGAGTTTTATCCGTTAG+GGG | + | tig0020610:22210-22229 | Msa1383620:CDS | 40.0% |
!! | TTGGAGTTTTATCCGTTAGG+GGG | + | tig0020610:22211-22230 | Msa1383620:CDS | 40.0% |
! | ATACATCCAGCAAGGACTTT+TGG | - | tig0020610:22241-22260 | None:intergenic | 40.0% |
CTAGAAGAAGAAACTGCAGT+TGG | - | tig0020610:22275-22294 | None:intergenic | 40.0% | |
TCATTTACGTAGTTGTAGGG+AGG | - | tig0020610:22589-22608 | None:intergenic | 40.0% | |
AATAAGGGCTTTCTTCCATC+GGG | + | tig0020610:22685-22704 | Msa1383620:CDS | 40.0% | |
! | GAAAGTATACCATATGCTGG+GGG | - | tig0020610:22835-22854 | None:intergenic | 40.0% |
GCATAATGTCCTTACTCCTT+AGG | - | tig0020610:23847-23866 | None:intergenic | 40.0% | |
ATATGGGACAGAACCAATTC+CGG | + | tig0020610:23883-23902 | Msa1383620:intron | 40.0% | |
CATGGAGTGTGAATTCAGTT+TGG | + | tig0020610:24013-24032 | Msa1383620:intron | 40.0% | |
! | ATGGCATGATCGTTGTTTCA+AGG | + | tig0020610:24074-24093 | Msa1383620:intron | 40.0% |
! | TGATCGTTGTTTCAAGGTTG+TGG | + | tig0020610:24080-24099 | Msa1383620:intron | 40.0% |
ACCTCAACAAAAGACGATGA+AGG | + | tig0020610:24200-24219 | Msa1383620:intron | 40.0% | |
! | ACCTTCATCGTCTTTTGTTG+AGG | - | tig0020610:24204-24223 | None:intergenic | 40.0% |
ACAAAAGACGATGAAGGTTC+TGG | + | tig0020610:24206-24225 | Msa1383620:intron | 40.0% | |
GCTTTGATCTAGCAACTGTT+AGG | - | tig0020610:24297-24316 | None:intergenic | 40.0% | |
ACAGTTGCTAGATCAAAGCA+CGG | + | tig0020610:24298-24317 | Msa1383620:intron | 40.0% | |
ACCTAGATTACTTACGTCCA+TGG | - | tig0020610:24741-24760 | None:intergenic | 40.0% | |
TTTACACGAGACAAAGGATG+TGG | - | tig0020610:24924-24943 | None:intergenic | 40.0% | |
!! | TGTTGCTTTACACGAGACAA+AGG | - | tig0020610:24930-24949 | None:intergenic | 40.0% |
CGACCAGTCACATATTTAAG+TGG | + | tig0020610:25137-25156 | Msa1383620:CDS | 40.0% | |
GAGCCACTTAAATATGTGAC+TGG | - | tig0020610:25143-25162 | None:intergenic | 40.0% | |
GGACTCCATATATATGCATG+AGG | - | tig0020610:25188-25207 | None:intergenic | 40.0% | |
CTTGTTCCTAAACCAAAAGG+TGG | + | tig0020610:25212-25231 | Msa1383620:intron | 40.0% | |
! | GGATCAAAGTAACCACCTTT+TGG | - | tig0020610:25227-25246 | None:intergenic | 40.0% |
GATTGACCCAATACAAATCG+AGG | - | tig0020610:25646-25665 | None:intergenic | 40.0% | |
CTCTTAAGCATGGAGAAATG+TGG | - | tig0020610:25711-25730 | None:intergenic | 40.0% | |
CACATTTCTCCATGCTTAAG+AGG | + | tig0020610:25709-25728 | Msa1383620:intron | 40.0% | |
AAGACTGAACCTCTTAAGCA+TGG | - | tig0020610:25721-25740 | None:intergenic | 40.0% | |
! | CAAAACTAGCTTGTAAGGTG+AGG | + | tig0020610:25851-25870 | Msa1383620:intron | 40.0% |
ATAGAATAGGTCACCGCTAT+CGG | - | tig0020610:25975-25994 | None:intergenic | 40.0% | |
! | AGAATTTGGGTCCCAAGTTT+TGG | + | tig0020610:25997-26016 | Msa1383620:intron | 40.0% |
CCAACACACTTCCAAAACTT+GGG | - | tig0020610:26011-26030 | None:intergenic | 40.0% | |
TCCAACACACTTCCAAAACT+TGG | - | tig0020610:26012-26031 | None:intergenic | 40.0% | |
!!! | AAGTTTTGGAAGTGTGTTGG+AGG | + | tig0020610:26011-26030 | Msa1383620:intron | 40.0% |
! | TGTTGGAGGTTTCTTGTTGT+GGG | + | tig0020610:26025-26044 | Msa1383620:intron | 40.0% |
ATCACTGTGTTTGTGTCTCA+AGG | + | tig0020610:26114-26133 | Msa1383620:intron | 40.0% | |
GTTTGTGTCTCAAGGTTTGT+TGG | + | tig0020610:26122-26141 | Msa1383620:intron | 40.0% | |
GGGCCTGATTAATGAACTAA+TGG | - | tig0020610:26161-26180 | None:intergenic | 40.0% | |
GTTCATTAATCAGGCCCATT+AGG | + | tig0020610:26164-26183 | Msa1383620:intron | 40.0% | |
ATGCATATACTTCAGCTTGG+GGG | + | tig0020610:26327-26346 | Msa1383620:intron | 40.0% | |
!! | AGCCATTTTACAAGAGACTC+GGG | - | tig0020610:26580-26599 | None:intergenic | 40.0% |
! | GTGACAAGCCGATTTACATT+GGG | + | tig0020610:26608-26627 | Msa1383620:CDS | 40.0% |
! | AAGCCGATTTACATTGGGTT+TGG | + | tig0020610:26613-26632 | Msa1383620:CDS | 40.0% |
!! | ATTGACTACACTGGTTTGGA+AGG | - | tig0020610:26719-26738 | None:intergenic | 40.0% |
! | TGCTATTGACTACACTGGTT+TGG | - | tig0020610:26723-26742 | None:intergenic | 40.0% |
! | TAGCATGCTATTGACTACAC+TGG | - | tig0020610:26728-26747 | None:intergenic | 40.0% |
TACTATTGTCTATCCTGTGG+TGG | - | tig0020610:26770-26789 | None:intergenic | 40.0% | |
CTCTACTATTGTCTATCCTG+TGG | - | tig0020610:26773-26792 | None:intergenic | 40.0% | |
CAGGATAGACAATAGTAGAG+TGG | + | tig0020610:26773-26792 | Msa1383620:intron | 40.0% | |
GCAAATTCCAAAAAGCCCTT+CGG | + | tig0020610:26829-26848 | Msa1383620:intron | 40.0% | |
! | ACTTATTCCGAAGGGCTTTT+TGG | - | tig0020610:26839-26858 | None:intergenic | 40.0% |
!!! | TCATCATGGCTTTTTGGTTG+GGG | + | tig0020610:26861-26880 | Msa1383620:intron | 40.0% |
!! | CTCCCTTTTTCCGTCATTTT+TGG | + | tig0020610:26948-26967 | Msa1383620:intron | 40.0% |
! | AAAACGCTATAGTGGGAACT+GGG | - | tig0020610:27036-27055 | None:intergenic | 40.0% |
! | TTCCCACTATAGCGTTTTCA+GGG | + | tig0020610:27038-27057 | Msa1383620:intron | 40.0% |
GTGTTATCAATCCCCAATAG+GGG | - | tig0020610:27077-27096 | None:intergenic | 40.0% | |
CAGTGTTATCAATCCCCAAT+AGG | - | tig0020610:27079-27098 | None:intergenic | 40.0% | |
ACACTGTTCCAAACCAATCA+TGG | + | tig0020610:27093-27112 | Msa1383620:intron | 40.0% | |
CACTGTTCCAAACCAATCAT+GGG | + | tig0020610:27094-27113 | Msa1383620:intron | 40.0% | |
GCAAGTCTGTTAGTTGTTGA+TGG | + | tig0020610:27253-27272 | Msa1383620:intron | 40.0% | |
!! | AGTTGTTGATGGGCTATATC+GGG | + | tig0020610:27264-27283 | Msa1383620:intron | 40.0% |
! | GTGCTAAGCTCACAATTTTG+TGG | + | tig0020610:27346-27365 | Msa1383620:intron | 40.0% |
! | TTTGTGGTCCTTTTTGTTGG+AGG | + | tig0020610:27362-27381 | Msa1383620:intron | 40.0% |
AGCATTCTCCTCCAACAAAA+AGG | - | tig0020610:27373-27392 | None:intergenic | 40.0% | |
! | TTTTGTTGGAGGAGAATGCT+TGG | + | tig0020610:27373-27392 | Msa1383620:intron | 40.0% |
! | GGAGAATGCTTGGATTTTTC+AGG | + | tig0020610:27383-27402 | Msa1383620:intron | 40.0% |
!!! | GTTTTAGGGTTATTACGGGA+AGG | + | tig0020610:27416-27435 | Msa1383620:intron | 40.0% |
! | AAGCCTTATCCCATTAAGTG+GGG | - | tig0020610:27476-27495 | None:intergenic | 40.0% |
! | GAAGCCTTATCCCATTAAGT+GGG | - | tig0020610:27477-27496 | None:intergenic | 40.0% |
! | TGAAGCCTTATCCCATTAAG+TGG | - | tig0020610:27478-27497 | None:intergenic | 40.0% |
! | GTTTTCTTGTCGTAACTCTC+GGG | + | tig0020610:27512-27531 | Msa1383620:intron | 40.0% |
! | GGAAGACCGACACTTTTATA+TGG | + | tig0020610:27540-27559 | Msa1383620:intron | 40.0% |
CGCTTATGTTATTCTCGTGT+TGG | - | tig0020610:27590-27609 | None:intergenic | 40.0% | |
CGGAAATGACATTGTTGCTA+GGG | + | tig0020610:27613-27632 | Msa1383620:intron | 40.0% | |
GGAAATGACATTGTTGCTAG+GGG | + | tig0020610:27614-27633 | Msa1383620:intron | 40.0% | |
ATATATAAAGAGAGGGAGGG+GGG | - | tig0020610:28033-28052 | None:intergenic | 40.0% | |
!! | CAGAGAGGCATCATCAATAA+AGG | + | tig0020610:28135-28154 | Msa1383620:CDS | 40.0% |
! | GAGGCATCATCAATAAAGGA+TGG | + | tig0020610:28139-28158 | Msa1383620:CDS | 40.0% |
GGCATCATCAATAAAGGATG+GGG | + | tig0020610:28141-28160 | Msa1383620:CDS | 40.0% | |
ATCATCAATAAAGGATGGGG+AGG | + | tig0020610:28144-28163 | Msa1383620:CDS | 40.0% | |
TGGATAATGTTCCCCATGAT+TGG | + | tig0020610:28283-28302 | Msa1383620:CDS | 40.0% | |
! | TTTTTGTAGGTGCATCATGG+AGG | + | tig0020610:28496-28515 | Msa1383620:intron | 40.0% |
!! | TTTGGTGATCAACCCTTTTG+GGG | + | tig0020610:28660-28679 | Msa1383620:CDS | 40.0% |
AGAGTACATGATAGAGGAGT+CGG | + | tig0020610:28687-28706 | Msa1383620:CDS | 40.0% | |
GTGTATCAGCCAAATGAAAC+GGG | + | tig0020610:28819-28838 | Msa1383620:intron | 40.0% | |
TCTTTCAGAAGTAGATTCGG+AGG | + | tig0020610:28848-28867 | Msa1383620:intron | 40.0% | |
CCAATGAGAAAGACTACATC+GGG | - | tig0020610:29117-29136 | None:intergenic | 40.0% | |
GCCAATGAGAAAGACTACAT+CGG | - | tig0020610:29118-29137 | None:intergenic | 40.0% | |
!!! | TGGAGTATTTTTAGGGCATG+TGG | - | tig0020610:29207-29226 | None:intergenic | 40.0% |
!! | ACAAAGGCAAACTGCTTTTC+GGG | + | tig0020610:29349-29368 | Msa1383620:intron | 40.0% |
CTTGTTGAAGCTGCGATAAT+TGG | + | tig0020610:29389-29408 | Msa1383620:intron | 40.0% | |
TGCCAAAGCTATGGAAAATG+AGG | + | tig0020610:29667-29686 | Msa1383620:CDS | 40.0% | |
AGCTATGGAAAATGAGGATG+GGG | + | tig0020610:29673-29692 | Msa1383620:CDS | 40.0% | |
! | TTAGTCTCGGGTTTCTTTTG+AGG | - | tig0020610:29734-29753 | None:intergenic | 40.0% |
GAGAAACAACTAGATGGAGA+TGG | - | tig0020610:29764-29783 | None:intergenic | 40.0% | |
CAGAGATTGAAAAACAGTGG+CGG | - | tig0020610:29838-29857 | None:intergenic | 40.0% | |
GACAGCACGGAAATATAGAT+TGG | - | tig0020610:29867-29886 | None:intergenic | 40.0% | |
TTTGCAATCACATGACAGCA+CGG | - | tig0020610:29880-29899 | None:intergenic | 40.0% | |
TGCGACCTAAATTCGTTGCA+CGG | - | tig0020610:18776-18795 | None:intergenic | 45.0% | |
CGAATTTAGGTCGCATTCAC+CGG | + | tig0020610:18781-18800 | Msa1383620:five_prime_UTR | 45.0% | |
AAGCACTACCAAGGAAGTTG+TGG | + | tig0020610:18936-18955 | Msa1383620:CDS | 45.0% | |
TATCATGTATTGCGGGACAG+AGG | + | tig0020610:19514-19533 | Msa1383620:intron | 45.0% | |
TCTTTGTATGTCTCTGCCTC+TGG | - | tig0020610:20386-20405 | None:intergenic | 45.0% | |
TGCTCGGAATGCCTAAATAC+AGG | - | tig0020610:20611-20630 | None:intergenic | 45.0% | |
GTATTTAGGCATTCCGAGCA+CGG | + | tig0020610:20611-20630 | Msa1383620:intron | 45.0% | |
TATTTAGGCATTCCGAGCAC+GGG | + | tig0020610:20612-20631 | Msa1383620:intron | 45.0% | |
GGATACATCTACTGGCAATG+TGG | - | tig0020610:20652-20671 | None:intergenic | 45.0% | |
TTGCCAGTAGATGTATCCCA+TGG | + | tig0020610:20654-20673 | Msa1383620:CDS | 45.0% | |
TCTCCATGGGATACATCTAC+TGG | - | tig0020610:20660-20679 | None:intergenic | 45.0% | |
TTTGGATGGAGAGATGTGGT+TGG | + | tig0020610:20969-20988 | Msa1383620:intron | 45.0% | |
TTGGATGGAGAGATGTGGTT+GGG | + | tig0020610:20970-20989 | Msa1383620:intron | 45.0% | |
GAGATGTGGTTGGGAAAATG+AGG | + | tig0020610:20979-20998 | Msa1383620:intron | 45.0% | |
TGGTTGGGAAAATGAGGTGT+GGG | + | tig0020610:20985-21004 | Msa1383620:intron | 45.0% | |
GATGTTGAACCTGATGCTCT+TGG | + | tig0020610:21293-21312 | Msa1383620:CDS | 45.0% | |
GTACAGCCATTTGTCGCAAT+AGG | + | tig0020610:21428-21447 | Msa1383620:CDS | 45.0% | |
CGCAATAGGAAAACGCTTAC+AGG | + | tig0020610:21442-21461 | Msa1383620:CDS | 45.0% | |
CAACAACTAGCAGCACATGA+AGG | - | tig0020610:21513-21532 | None:intergenic | 45.0% | |
! | CTTCATGTGCTGCTAGTTGT+TGG | + | tig0020610:21511-21530 | Msa1383620:intron | 45.0% |
!! | TGCTGCTAGTTGTTGGTTCA+TGG | + | tig0020610:21518-21537 | Msa1383620:intron | 45.0% |
!! | GCTGCTAGTTGTTGGTTCAT+GGG | + | tig0020610:21519-21538 | Msa1383620:intron | 45.0% |
CCTGCGCGTAAATGTGAATA+AGG | - | tig0020610:22126-22145 | None:intergenic | 45.0% | |
CCTTATTCACATTTACGCGC+AGG | + | tig0020610:22123-22142 | Msa1383620:intron | 45.0% | |
CACATTTACGCGCAGGATTA+TGG | + | tig0020610:22130-22149 | Msa1383620:intron | 45.0% | |
!!! | GTTTGTTTTGACAGCTGGGT+TGG | + | tig0020610:22192-22211 | Msa1383620:CDS | 45.0% |
!! | GGGTTGGAGTTTTATCCGTT+AGG | + | tig0020610:22208-22227 | Msa1383620:CDS | 45.0% |
CGTAGTACATACATCCAGCA+AGG | - | tig0020610:22249-22268 | None:intergenic | 45.0% | |
CTCTGAACAGGTATCTCAGA+GGG | - | tig0020610:22712-22731 | None:intergenic | 45.0% | |
TCTCTGAACAGGTATCTCAG+AGG | - | tig0020610:22713-22732 | None:intergenic | 45.0% | |
TATACCATATGCTGGGGGAT+TGG | - | tig0020610:22830-22849 | None:intergenic | 45.0% | |
TATGCTCGGCAGATTAGACT+CGG | + | tig0020610:23738-23757 | Msa1383620:intron | 45.0% | |
! | GGCGAAGTACAGTTTTTGCA+TGG | + | tig0020610:24055-24074 | Msa1383620:intron | 45.0% |
! | AAGACGATGAAGGTTCTGGT+TGG | + | tig0020610:24210-24229 | Msa1383620:intron | 45.0% |
!! | TTTCCCTGAAAAGTGCTGCA+AGG | + | tig0020610:24233-24252 | Msa1383620:intron | 45.0% |
!! | TTCCCTGAAAAGTGCTGCAA+GGG | + | tig0020610:24234-24253 | Msa1383620:intron | 45.0% |
CAGTTGCTAGATCAAAGCAC+GGG | + | tig0020610:24299-24318 | Msa1383620:intron | 45.0% | |
GCCATGGACGTAAGTAATCT+AGG | + | tig0020610:24737-24756 | Msa1383620:intron | 45.0% | |
TCTCGTGTAAAGCAACAAGC+TGG | + | tig0020610:24933-24952 | Msa1383620:CDS | 45.0% | |
!! | GTCGACTCGTTAATTTGGCT+TGG | + | tig0020610:25068-25087 | Msa1383620:CDS | 45.0% |
CTCATGTTAATCATTCCCCG+TGG | + | tig0020610:25665-25684 | Msa1383620:intron | 45.0% | |
TCCCCGTGGCATATAAAGAT+TGG | + | tig0020610:25679-25698 | Msa1383620:intron | 45.0% | |
GCCAATCTTTATATGCCACG+GGG | - | tig0020610:25683-25702 | None:intergenic | 45.0% | |
CGCCAATCTTTATATGCCAC+GGG | - | tig0020610:25684-25703 | None:intergenic | 45.0% | |
GCGCCAATCTTTATATGCCA+CGG | - | tig0020610:25685-25704 | None:intergenic | 45.0% | |
AGGTTCAGTCTTGAGTGTGA+GGG | + | tig0020610:25729-25748 | Msa1383620:intron | 45.0% | |
TTGTCTATGCTTCGGATGTG+TGG | + | tig0020610:25785-25804 | Msa1383620:intron | 45.0% | |
CATCTGAAGAGTGACTCTAG+TGG | + | tig0020610:25948-25967 | Msa1383620:intron | 45.0% | |
TAGAATAGGTCACCGCTATC+GGG | - | tig0020610:25974-25993 | None:intergenic | 45.0% | |
!!! | CCCAAGTTTTGGAAGTGTGT+TGG | + | tig0020610:26008-26027 | Msa1383620:intron | 45.0% |
GTGTTGGAGGTTTCTTGTTG+TGG | + | tig0020610:26024-26043 | Msa1383620:intron | 45.0% | |
TGCATATACTTCAGCTTGGG+GGG | + | tig0020610:26328-26347 | Msa1383620:intron | 45.0% | |
! | CATTTTACAAGAGACTCGGG+AGG | - | tig0020610:26577-26596 | None:intergenic | 45.0% |
CTCCCGAGTCTCTTGTAAAA+TGG | + | tig0020610:26575-26594 | Msa1383620:CDS | 45.0% | |
! | GGTGACAAGCCGATTTACAT+TGG | + | tig0020610:26607-26626 | Msa1383620:CDS | 45.0% |
! | TTACATTGGGTTTGGTAGCC+TGG | + | tig0020610:26621-26640 | Msa1383620:CDS | 45.0% |
! | TAGCGGGCACAACTTAGAAT+GGG | + | tig0020610:26803-26822 | Msa1383620:intron | 45.0% |
! | GAAAACGCTATAGTGGGAAC+TGG | - | tig0020610:27037-27056 | None:intergenic | 45.0% |
! | GTTCCCACTATAGCGTTTTC+AGG | + | tig0020610:27037-27056 | Msa1383620:intron | 45.0% |
GTCCCTGAAAACGCTATAGT+GGG | - | tig0020610:27043-27062 | None:intergenic | 45.0% | |
TGTCCCTGAAAACGCTATAG+TGG | - | tig0020610:27044-27063 | None:intergenic | 45.0% | |
ACAGTTGCTACAACCCCTAT+TGG | + | tig0020610:27061-27080 | Msa1383620:intron | 45.0% | |
CAGTTGCTACAACCCCTATT+GGG | + | tig0020610:27062-27081 | Msa1383620:intron | 45.0% | |
AGTTGCTACAACCCCTATTG+GGG | + | tig0020610:27063-27082 | Msa1383620:intron | 45.0% | |
! | CAATCTGCCCATGATTGGTT+TGG | - | tig0020610:27104-27123 | None:intergenic | 45.0% |
TGAAGCAATCTGCCCATGAT+TGG | - | tig0020610:27109-27128 | None:intergenic | 45.0% | |
CAGATTGCTTCACCCAAAGT+TGG | + | tig0020610:27117-27136 | Msa1383620:intron | 45.0% | |
AGAAAAGTCTCCAGGTAGTC+AGG | - | tig0020610:27295-27314 | None:intergenic | 45.0% | |
CGAGAATAACATAAGCGCAG+CGG | + | tig0020610:27593-27612 | Msa1383620:intron | 45.0% | |
GCGGAAATGACATTGTTGCT+AGG | + | tig0020610:27612-27631 | Msa1383620:intron | 45.0% | |
AAGGCTTATCCCACTAAGTG+GGG | - | tig0020610:27893-27912 | None:intergenic | 45.0% | |
CAAGGCTTATCCCACTAAGT+GGG | - | tig0020610:27894-27913 | None:intergenic | 45.0% | |
GGATCTTGAACAGGCTGTAA+CGG | - | tig0020610:28069-28088 | None:intergenic | 45.0% | |
!! | TGTAGAAGCACTGGAAACCA+CGG | + | tig0020610:28110-28129 | Msa1383620:CDS | 45.0% |
AATAAAGGATGGGGAGGTCT+TGG | + | tig0020610:28150-28169 | Msa1383620:CDS | 45.0% | |
ATAAAGGATGGGGAGGTCTT+GGG | + | tig0020610:28151-28170 | Msa1383620:CDS | 45.0% | |
TTTCCCAGTGACAGAACCAA+AGG | + | tig0020610:28245-28264 | Msa1383620:intron | 45.0% | |
!! | AGTCCTTTGGTTCTGTCACT+GGG | - | tig0020610:28251-28270 | None:intergenic | 45.0% |
TGTACTCTCTCACCCCAAAA+GGG | - | tig0020610:28675-28694 | None:intergenic | 45.0% | |
ATGTACTCTCTCACCCCAAA+AGG | - | tig0020610:28676-28695 | None:intergenic | 45.0% | |
! | GGTGAGAGAGTACATGATAG+AGG | + | tig0020610:28681-28700 | Msa1383620:CDS | 45.0% |
GAAAACTCGTCAACTGGGAT+AGG | - | tig0020610:28720-28739 | None:intergenic | 45.0% | |
GAAGCGAAAACTCGTCAACT+GGG | - | tig0020610:28725-28744 | None:intergenic | 45.0% | |
AGAAGCAAGCCCGTTTCATT+TGG | - | tig0020610:28831-28850 | None:intergenic | 45.0% | |
CGGCATTAGGCAATAATAGC+CGG | + | tig0020610:29055-29074 | Msa1383620:intron | 45.0% | |
GGCATTAGGCAATAATAGCC+GGG | + | tig0020610:29056-29075 | Msa1383620:intron | 45.0% | |
CCCGATGTAGTCTTTCTCAT+TGG | + | tig0020610:29114-29133 | Msa1383620:intron | 45.0% | |
GTAGTCTTTCTCATTGGCCA+TGG | + | tig0020610:29120-29139 | Msa1383620:intron | 45.0% | |
! | GGATTAGGTGTTTTCCTCCA+TGG | - | tig0020610:29140-29159 | None:intergenic | 45.0% |
TGGGTAAAACAAGGCTGAAC+AGG | + | tig0020610:29178-29197 | Msa1383620:intron | 45.0% | |
TCTGTCTGTCCACTCTCAAT+TGG | - | tig0020610:29227-29246 | None:intergenic | 45.0% | |
TGTAAAGTGACAACAGGGAG+TGG | - | tig0020610:29305-29324 | None:intergenic | 45.0% | |
TTGCGTGGCCTCAAAATTTG+AGG | + | tig0020610:29521-29540 | Msa1383620:intron | 45.0% | |
GAAAATGAGGATGGGGTAAC+TGG | + | tig0020610:29680-29699 | Msa1383620:CDS | 45.0% | |
! | AGATGGCTCTGTGTTAGTCT+CGG | - | tig0020610:29747-29766 | None:intergenic | 45.0% |
TCACCATGACCAGATACATG+CGG | + | tig0020610:30035-30054 | Msa1383620:three_prime_UTR | 45.0% | |
!!! | CAAATTAATTTTATAAATAT+CGG | - | tig0020610:19403-19422 | None:intergenic | 5.0% |
!!! | TTATTTTACATAATTAATTT+TGG | + | tig0020610:19540-19559 | Msa1383620:intron | 5.0% |
!! | AAAATAAATAAATTATGATA+TGG | - | tig0020610:21078-21097 | None:intergenic | 5.0% |
!! | CTTGGTAGTGCTTTCGCTGT+TGG | - | tig0020610:18929-18948 | None:intergenic | 50.0% |
!! | CAACAGCGAAAGCACTACCA+AGG | + | tig0020610:18927-18946 | Msa1383620:CDS | 50.0% |
TTTGGAAGAATGACGGCGCT+AGG | + | tig0020610:19558-19577 | Msa1383620:intron | 50.0% | |
CATGTCCGCCAAAATGGTCA+AGG | + | tig0020610:20031-20050 | Msa1383620:intron | 50.0% | |
! | GTCTGCCTTGACCATTTTGG+CGG | - | tig0020610:20039-20058 | None:intergenic | 50.0% |
ATTTAGGCATTCCGAGCACG+GGG | + | tig0020610:20613-20632 | Msa1383620:intron | 50.0% | |
ACTTTAGACAACCCCGTGCT+CGG | - | tig0020610:20627-20646 | None:intergenic | 50.0% | |
GTGGTTGGGAAAATGAGGTG+TGG | + | tig0020610:20984-21003 | Msa1383620:intron | 50.0% | |
! | ACTTTTGGATCGCCCCCTAA+CGG | - | tig0020610:22226-22245 | None:intergenic | 50.0% |
GGGACACCCGAATCAATATC+AGG | - | tig0020610:22784-22803 | None:intergenic | 50.0% | |
TTGAAAAGCCAATGCGACCG+TGG | + | tig0020610:22927-22946 | Msa1383620:intron | 50.0% | |
GAGTCAGCACAGTTAGGTGA+AGG | - | tig0020610:23405-23424 | None:intergenic | 50.0% | |
TGTGCTGAGTCAGCACAGTT+AGG | - | tig0020610:23411-23430 | None:intergenic | 50.0% | |
ATGCTCGGCAGATTAGACTC+GGG | + | tig0020610:23739-23758 | Msa1383620:intron | 50.0% | |
ATATGGCCCAGTCTCAGCAA+TGG | - | tig0020610:23909-23928 | None:intergenic | 50.0% | |
GGTACTAAGAAGAAGGGCCA+CGG | + | tig0020610:24034-24053 | Msa1383620:intron | 50.0% | |
GCAAAAACTGTACTTCGCCG+TGG | - | tig0020610:24054-24073 | None:intergenic | 50.0% | |
! | GACCCTTGCAGCACTTTTCA+GGG | - | tig0020610:24239-24258 | None:intergenic | 50.0% |
TTGTAAGGCCTCTGCGACAT+GGG | - | tig0020610:24691-24710 | None:intergenic | 50.0% | |
TTTGTAAGGCCTCTGCGACA+TGG | - | tig0020610:24692-24711 | None:intergenic | 50.0% | |
GGATGTGGAAAGTCAGCTGT+TGG | - | tig0020610:24909-24928 | None:intergenic | 50.0% | |
GAGGTTCAGTCTTGAGTGTG+AGG | + | tig0020610:25728-25747 | Msa1383620:intron | 50.0% | |
! | AGTAGAGTGGTTTGGCGTAG+CGG | + | tig0020610:26786-26805 | Msa1383620:intron | 50.0% |
!! | GTAGCGGGCACAACTTAGAA+TGG | + | tig0020610:26802-26821 | Msa1383620:intron | 50.0% |
AGCGGGCACAACTTAGAATG+GGG | + | tig0020610:26804-26823 | Msa1383620:intron | 50.0% | |
GAGTAGCCCTAGAACTGCTT+TGG | - | tig0020610:26916-26935 | None:intergenic | 50.0% | |
GCTCCCCACTTAATGGGATA+AGG | + | tig0020610:27470-27489 | Msa1383620:intron | 50.0% | |
!! | ATATGGTACGGAGTGTTGGG+CGG | + | tig0020610:27557-27576 | Msa1383620:intron | 50.0% |
! | ATTGTTGCTAGGGGTGTGCA+TGG | + | tig0020610:27623-27642 | Msa1383620:intron | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | - | tig0020610:27889-27908 | None:intergenic | 50.0% | |
CCAAGGCTTATCCCACTAAG+TGG | - | tig0020610:27895-27914 | None:intergenic | 50.0% | |
CCACTTAGTGGGATAAGCCT+TGG | + | tig0020610:27892-27911 | Msa1383620:intron | 50.0% | |
!! | GTAGAAGCACTGGAAACCAC+GGG | + | tig0020610:28111-28130 | Msa1383620:CDS | 50.0% |
TAAAGGATGGGGAGGTCTTG+GGG | + | tig0020610:28152-28171 | Msa1383620:CDS | 50.0% | |
!! | GAGTCCTTTGGTTCTGTCAC+TGG | - | tig0020610:28252-28271 | None:intergenic | 50.0% |
AACTCGTCAACTGGGATAGG+TGG | - | tig0020610:28717-28736 | None:intergenic | 50.0% | |
GGAAGCGAAAACTCGTCAAC+TGG | - | tig0020610:28726-28745 | None:intergenic | 50.0% | |
! | GGCAATAATAGCCGGGTTAG+AGG | + | tig0020610:29063-29082 | Msa1383620:intron | 50.0% |
! | ATAATAGCCGGGTTAGAGGC+TGG | + | tig0020610:29067-29086 | Msa1383620:intron | 50.0% |
!! | CTGGTTGGGCAGCTTTAAGT+TGG | + | tig0020610:29086-29105 | Msa1383620:intron | 50.0% |
GTCTTTCTCATTGGCCATGG+AGG | + | tig0020610:29123-29142 | Msa1383620:intron | 50.0% | |
! | GATGGCTCTGTGTTAGTCTC+GGG | - | tig0020610:29746-29765 | None:intergenic | 50.0% |
ATTCCTGATCCAGTGCAAGC+TGG | + | tig0020610:29807-29826 | Msa1383620:exon | 50.0% | |
AGACCGCATGTATCTGGTCA+TGG | - | tig0020610:30041-30060 | None:intergenic | 50.0% | |
GGGATTAGACCGCATGTATC+TGG | - | tig0020610:30047-30066 | None:intergenic | 50.0% | |
CAGAGCGGCAGAGACATCTA+AGG | + | tig0020610:20727-20746 | Msa1383620:CDS | 55.0% | |
! | GCAGAGACATCTAAGGCCTG+AGG | + | tig0020610:20734-20753 | Msa1383620:CDS | 55.0% |
! | GAACCTGATGCTCTTGGTGC+TGG | + | tig0020610:21299-21318 | Msa1383620:CDS | 55.0% |
!! | GATCCAGCACCAAGAGCATC+AGG | - | tig0020610:21305-21324 | None:intergenic | 55.0% |
GGCGATCCAAAAGTCCTTGC+TGG | + | tig0020610:22232-22251 | Msa1383620:CDS | 55.0% | |
ATGGCCAATCCCCCAGCATA+TGG | + | tig0020610:22823-22842 | Msa1383620:CDS | 55.0% | |
TGCTCGGCAGATTAGACTCG+GGG | + | tig0020610:23740-23759 | Msa1383620:intron | 55.0% | |
AGATTAGACTCGGGGAGGGA+GGG | + | tig0020610:23748-23767 | Msa1383620:intron | 55.0% | |
GTCTCAGCAATGGCCGGAAT+TGG | - | tig0020610:23899-23918 | None:intergenic | 55.0% | |
ATTCCGGCCATTGCTGAGAC+TGG | + | tig0020610:23899-23918 | Msa1383620:intron | 55.0% | |
TTCCGGCCATTGCTGAGACT+GGG | + | tig0020610:23900-23919 | Msa1383620:intron | 55.0% | |
! | CGACCCTTGCAGCACTTTTC+AGG | - | tig0020610:24240-24259 | None:intergenic | 55.0% |
GGTCGTTGTCGTCTTGTCGA+CGG | + | tig0020610:24255-24274 | Msa1383620:intron | 55.0% | |
GTCGTTGTCGTCTTGTCGAC+GGG | + | tig0020610:24256-24275 | Msa1383620:intron | 55.0% | |
! | TGTCGTCTTGTCGACGGGTT+TGG | + | tig0020610:24261-24280 | Msa1383620:intron | 55.0% |
! | GTCGTCTTGTCGACGGGTTT+GGG | + | tig0020610:24262-24281 | Msa1383620:intron | 55.0% |
! | TCGTCTTGTCGACGGGTTTG+GGG | + | tig0020610:24263-24282 | Msa1383620:intron | 55.0% |
! | GGAAAGTCAGCTGTTGGCCT+GGG | - | tig0020610:24903-24922 | None:intergenic | 55.0% |
TGGAAAGTCAGCTGTTGGCC+TGG | - | tig0020610:24904-24923 | None:intergenic | 55.0% | |
TGACTCTAGTGGCCCGATAG+CGG | + | tig0020610:25959-25978 | Msa1383620:intron | 55.0% | |
! | GCTATAGGCTTTATCGGCCC+TGG | + | tig0020610:26744-26763 | Msa1383620:intron | 55.0% |
TGTCTATCCTGTGGTGGCCA+GGG | - | tig0020610:26764-26783 | None:intergenic | 55.0% | |
TTGTCTATCCTGTGGTGGCC+AGG | - | tig0020610:26765-26784 | None:intergenic | 55.0% | |
! | GTAGAGTGGTTTGGCGTAGC+GGG | + | tig0020610:26787-26806 | Msa1383620:intron | 55.0% |
TCGGGTTTGTCCTGACTACC+TGG | + | tig0020610:27282-27301 | Msa1383620:intron | 55.0% | |
CCAAGCGCCAAAGAGATGTG+AGG | - | tig0020610:27451-27470 | None:intergenic | 55.0% | |
CCTCACATCTCTTTGGCGCT+TGG | + | tig0020610:27448-27467 | Msa1383620:intron | 55.0% | |
CGCTTGGCTCCCCACTTAAT+GGG | + | tig0020610:27464-27483 | Msa1383620:intron | 55.0% | |
TGTCGTAACTCTCGGGCAAC+TGG | + | tig0020610:27519-27538 | Msa1383620:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | tig0020610:27881-27900 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | tig0020610:27880-27899 | Msa1383620:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | tig0020610:27881-27900 | Msa1383620:intron | 55.0% | |
TAGGTGCATCATGGAGGAGC+AGG | + | tig0020610:28502-28521 | Msa1383620:intron | 55.0% | |
GAGCAGGAACAACAGCTGCA+GGG | + | tig0020610:28518-28537 | Msa1383620:CDS | 55.0% | |
CGTCAACTGGGATAGGTGGA+GGG | - | tig0020610:28713-28732 | None:intergenic | 55.0% | |
TCGTCAACTGGGATAGGTGG+AGG | - | tig0020610:28714-28733 | None:intergenic | 55.0% | |
TGACCAGCTTGCACTGGATC+AGG | - | tig0020610:29813-29832 | None:intergenic | 55.0% | |
GTCGTACACGACGGCGGAAA+TGG | + | tig0020610:18816-18835 | Msa1383620:exon | 60.0% | |
GTACACGACGGCGGAAATGG+CGG | + | tig0020610:18819-18838 | Msa1383620:exon | 60.0% | |
GAAGAACGGCGGCGATTCTG+CGG | - | tig0020610:18850-18869 | None:intergenic | 60.0% | |
GGAAGAATGACGGCGCTAGG+CGG | + | tig0020610:19561-19580 | Msa1383620:intron | 60.0% | |
GAAGAATGACGGCGCTAGGC+GGG | + | tig0020610:19562-19581 | Msa1383620:intron | 60.0% | |
! | CGGAGAAGCATGGAGAGAGC+AGG | - | tig0020610:20336-20355 | None:intergenic | 60.0% |
GGTATCTCAGAGGGTCCCGA+TGG | - | tig0020610:22703-22722 | None:intergenic | 60.0% | |
GAATAGCTGCCCCAACGCCA+CGG | - | tig0020610:22947-22966 | None:intergenic | 60.0% | |
TCGGCAGATTAGACTCGGGG+AGG | + | tig0020610:23743-23762 | Msa1383620:intron | 60.0% | |
CGGCAGATTAGACTCGGGGA+GGG | + | tig0020610:23744-23763 | Msa1383620:intron | 60.0% | |
CAGATTAGACTCGGGGAGGG+AGG | + | tig0020610:23747-23766 | Msa1383620:intron | 60.0% | |
GATTAGACTCGGGGAGGGAG+GGG | + | tig0020610:23749-23768 | Msa1383620:intron | 60.0% | |
ATTAGACTCGGGGAGGGAGG+GGG | + | tig0020610:23750-23769 | Msa1383620:intron | 60.0% | |
AGGGCATACCCATGTCGCAG+AGG | + | tig0020610:24680-24699 | Msa1383620:intron | 60.0% | |
GCGCTTGGCTCCCCACTTAA+TGG | + | tig0020610:27463-27482 | Msa1383620:intron | 60.0% | |
! | AAAGAGAGGGAGGGGGGCAT+GGG | - | tig0020610:28027-28046 | None:intergenic | 60.0% |
TAAAGAGAGGGAGGGGGGCA+TGG | - | tig0020610:28028-28047 | None:intergenic | 60.0% | |
CTGGAAACCACGGGACAGAG+AGG | + | tig0020610:28120-28139 | Msa1383620:CDS | 60.0% | |
GATGATGCCTCTCTGTCCCG+TGG | - | tig0020610:28130-28149 | None:intergenic | 60.0% | |
GGGAGGTCTTGGGGACTGTA+AGG | + | tig0020610:28161-28180 | Msa1383620:intron | 60.0% | |
GGAGCAGGAACAACAGCTGC+AGG | + | tig0020610:28517-28536 | Msa1383620:CDS | 60.0% | |
! | TAGCCGGGTTAGAGGCTGGT+TGG | + | tig0020610:29071-29090 | Msa1383620:intron | 60.0% |
! | AGCCGGGTTAGAGGCTGGTT+GGG | + | tig0020610:29072-29091 | Msa1383620:intron | 60.0% |
TGCCCAACCAGCCTCTAACC+CGG | - | tig0020610:29077-29096 | None:intergenic | 60.0% | |
GTACGACGCGCGCGAGATTC+CGG | - | tig0020610:18803-18822 | None:intergenic | 65.0% | |
AGCCAATGCGACCGTGGCGT+TGG | + | tig0020610:22933-22952 | Msa1383620:intron | 65.0% | |
GCCAATGCGACCGTGGCGTT+GGG | + | tig0020610:22934-22953 | Msa1383620:intron | 65.0% | |
CCAATGCGACCGTGGCGTTG+GGG | + | tig0020610:22935-22954 | Msa1383620:intron | 65.0% | |
GGCCCAGTCTCAGCAATGGC+CGG | - | tig0020610:23905-23924 | None:intergenic | 65.0% | |
TTATCGGCCCTGGCCACCAC+AGG | + | tig0020610:26754-26773 | Msa1383620:intron | 65.0% | |
GCGGTCTGACCAGCTTGCAC+TGG | - | tig0020610:29819-29838 | None:intergenic | 65.0% | |
CTCGCGCGCGTCGTACACGA+CGG | + | tig0020610:18807-18826 | Msa1383620:five_prime_UTR | 70.0% | |
CCCCAACGCCACGGTCGCAT+TGG | - | tig0020610:22938-22957 | None:intergenic | 70.0% | |
GCGCGCGTCGTACACGACGG+CGG | + | tig0020610:18810-18829 | Msa1383620:five_prime_UTR | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0020610 | gene | 18635 | 30152 | 18635 | ID=Msa1383620;Name=Msa1383620 |
tig0020610 | mRNA | 18635 | 30152 | 18635 | ID=Msa1383620-mRNA-1;Parent=Msa1383620;Name=Msa1383620-mRNA-1;_AED=0.25;_eAED=0.25;_QI=200|1|1|1|0.8|0.75|16|294|620 |
tig0020610 | exon | 18635 | 19015 | 18635 | ID=Msa1383620-mRNA-1:exon:8658;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 20619 | 20800 | 20619 | ID=Msa1383620-mRNA-1:exon:8659;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 21227 | 21463 | 21227 | ID=Msa1383620-mRNA-1:exon:8660;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 22145 | 22256 | 22145 | ID=Msa1383620-mRNA-1:exon:8661;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 22674 | 22844 | 22674 | ID=Msa1383620-mRNA-1:exon:8662;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 24682 | 24745 | 24682 | ID=Msa1383620-mRNA-1:exon:8663;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 24905 | 24962 | 24905 | ID=Msa1383620-mRNA-1:exon:8664;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 25053 | 25230 | 25053 | ID=Msa1383620-mRNA-1:exon:8665;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 26512 | 26642 | 26512 | ID=Msa1383620-mRNA-1:exon:8666;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 28075 | 28177 | 28075 | ID=Msa1383620-mRNA-1:exon:8667;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 28253 | 28329 | 28253 | ID=Msa1383620-mRNA-1:exon:8668;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 28505 | 28552 | 28505 | ID=Msa1383620-mRNA-1:exon:8669;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 28636 | 28785 | 28636 | ID=Msa1383620-mRNA-1:exon:8670;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 29644 | 29874 | 29644 | ID=Msa1383620-mRNA-1:exon:8671;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 29899 | 30001 | 29899 | ID=Msa1383620-mRNA-1:exon:8672;Parent=Msa1383620-mRNA-1 |
tig0020610 | exon | 30022 | 30152 | 30022 | ID=Msa1383620-mRNA-1:exon:8673;Parent=Msa1383620-mRNA-1 |
tig0020610 | five_prime_UTR | 18635 | 18834 | 18635 | ID=Msa1383620-mRNA-1:five_prime_utr;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 18835 | 19015 | 18835 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 20619 | 20800 | 20619 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 21227 | 21463 | 21227 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 22145 | 22256 | 22145 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 22674 | 22844 | 22674 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 24682 | 24745 | 24682 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 24905 | 24962 | 24905 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 25053 | 25230 | 25053 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 26512 | 26642 | 26512 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 28075 | 28177 | 28075 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 28253 | 28329 | 28253 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 28505 | 28552 | 28505 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 28636 | 28785 | 28636 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | CDS | 29644 | 29814 | 29644 | ID=Msa1383620-mRNA-1:cds;Parent=Msa1383620-mRNA-1 |
tig0020610 | three_prime_UTR | 29815 | 29874 | 29815 | ID=Msa1383620-mRNA-1:three_prime_utr;Parent=Msa1383620-mRNA-1 |
tig0020610 | three_prime_UTR | 29899 | 30001 | 29899 | ID=Msa1383620-mRNA-1:three_prime_utr;Parent=Msa1383620-mRNA-1 |
tig0020610 | three_prime_UTR | 30022 | 30152 | 30022 | ID=Msa1383620-mRNA-1:three_prime_utr;Parent=Msa1383620-mRNA-1 |
Gene Sequence |
Protein sequence |