Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1393900 | XP_014517622.1 | 78.448 | 464 | 62 | 2 | 12 | 438 | 6 | 468 | 0.0 | 745 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1393900 | sp|Q3ECP6|GDL22_ARATH | 59.911 | 449 | 102 | 2 | 16 | 438 | 12 | 408 | 0.0 | 554 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1393900 | A0A1S3VHD5 | 78.448 | 464 | 62 | 2 | 12 | 438 | 6 | 468 | 0.0 | 745 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0193850 | Msa1393900 | 0.826074 | 3.311218e-54 | -8.615850e-47 |
Msa0235710 | Msa1393900 | 0.821022 | 5.035391e-53 | -8.615850e-47 |
Msa1039000 | Msa1393900 | 0.911300 | 7.104089e-83 | -8.615850e-47 |
Msa0267250 | Msa1393900 | 0.854627 | 1.085345e-61 | -8.615850e-47 |
Msa0274440 | Msa1393900 | 0.804792 | 1.822063e-49 | -8.615850e-47 |
Msa0314170 | Msa1393900 | 0.808766 | 2.635632e-50 | -8.615850e-47 |
Msa1128750 | Msa1393900 | 0.965104 | 3.564940e-124 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1393900 | MtrunA17_Chr7g0273101 | 98.596 | 356 | 5 | 0 | 83 | 438 | 25 | 380 | 0.0 | 727 |
Msa1393900 | MtrunA17_Chr1g0191461 | 65.871 | 419 | 86 | 5 | 11 | 427 | 7 | 370 | 0.0 | 541 |
Msa1393900 | MtrunA17_Chr8g0381581 | 48.857 | 350 | 169 | 7 | 84 | 427 | 37 | 382 | 2.70e-110 | 330 |
Msa1393900 | MtrunA17_Chr1g0160101 | 47.875 | 353 | 172 | 8 | 84 | 430 | 39 | 385 | 3.82e-106 | 320 |
Msa1393900 | MtrunA17_Chr1g0159971 | 48.011 | 352 | 172 | 7 | 84 | 430 | 44 | 389 | 1.49e-105 | 318 |
Msa1393900 | MtrunA17_Chr7g0271551 | 46.839 | 348 | 160 | 7 | 87 | 432 | 36 | 360 | 5.27e-103 | 310 |
Msa1393900 | MtrunA17_Chr1g0159981 | 47.293 | 351 | 172 | 9 | 81 | 425 | 40 | 383 | 5.41e-100 | 304 |
Msa1393900 | MtrunA17_Chr7g0254461 | 44.193 | 353 | 186 | 7 | 85 | 430 | 41 | 389 | 1.92e-99 | 302 |
Msa1393900 | MtrunA17_Chr1g0160031 | 46.857 | 350 | 171 | 9 | 84 | 427 | 36 | 376 | 2.19e-97 | 297 |
Msa1393900 | MtrunA17_Chr1g0159991 | 46.839 | 348 | 172 | 9 | 84 | 425 | 33 | 373 | 7.12e-97 | 295 |
Msa1393900 | MtrunA17_Chr1g0160011 | 46.571 | 350 | 172 | 9 | 84 | 427 | 37 | 377 | 2.73e-95 | 291 |
Msa1393900 | MtrunA17_Chr7g0226941 | 42.939 | 347 | 186 | 7 | 84 | 424 | 30 | 370 | 1.11e-94 | 290 |
Msa1393900 | MtrunA17_Chr6g0450701 | 44.540 | 348 | 177 | 6 | 85 | 427 | 37 | 373 | 3.01e-94 | 288 |
Msa1393900 | MtrunA17_Chr7g0226931 | 42.936 | 361 | 179 | 7 | 85 | 424 | 36 | 390 | 1.98e-90 | 280 |
Msa1393900 | MtrunA17_Chr6g0450711 | 44.380 | 347 | 175 | 7 | 85 | 425 | 120 | 454 | 2.57e-88 | 276 |
Msa1393900 | MtrunA17_Chr7g0226911 | 42.450 | 351 | 186 | 7 | 85 | 425 | 33 | 377 | 3.20e-88 | 273 |
Msa1393900 | MtrunA17_Chr8g0352901 | 41.144 | 367 | 187 | 11 | 73 | 427 | 18 | 367 | 6.52e-83 | 259 |
Msa1393900 | MtrunA17_Chr7g0275291 | 39.316 | 351 | 194 | 6 | 84 | 426 | 30 | 369 | 1.12e-80 | 254 |
Msa1393900 | MtrunA17_Chr6g0450721 | 42.486 | 346 | 168 | 8 | 85 | 424 | 31 | 351 | 1.29e-80 | 253 |
Msa1393900 | MtrunA17_Chr6g0450731 | 42.274 | 343 | 177 | 9 | 85 | 425 | 31 | 354 | 9.05e-79 | 248 |
Msa1393900 | MtrunA17_Chr8g0347751 | 39.385 | 358 | 188 | 9 | 84 | 426 | 33 | 376 | 7.12e-75 | 239 |
Msa1393900 | MtrunA17_Chr8g0339251 | 40.303 | 330 | 168 | 11 | 73 | 397 | 18 | 323 | 3.80e-65 | 212 |
Msa1393900 | MtrunA17_Chr7g0273111 | 94.048 | 84 | 5 | 0 | 1 | 84 | 1 | 84 | 1.33e-50 | 166 |
Msa1393900 | MtrunA17_Chr4g0057991 | 32.787 | 366 | 207 | 11 | 85 | 437 | 37 | 376 | 3.35e-49 | 172 |
Msa1393900 | MtrunA17_Chr2g0283501 | 31.044 | 364 | 206 | 10 | 85 | 427 | 29 | 368 | 5.61e-47 | 166 |
Msa1393900 | MtrunA17_Chr2g0283531 | 31.742 | 356 | 211 | 9 | 85 | 426 | 29 | 366 | 1.10e-45 | 162 |
Msa1393900 | MtrunA17_Chr2g0283481 | 32.133 | 361 | 209 | 12 | 84 | 428 | 44 | 384 | 1.64e-45 | 162 |
Msa1393900 | MtrunA17_Chr3g0112821 | 33.241 | 361 | 192 | 15 | 83 | 424 | 26 | 356 | 2.96e-45 | 160 |
Msa1393900 | MtrunA17_Chr3g0104821 | 32.123 | 358 | 208 | 11 | 83 | 424 | 40 | 378 | 6.66e-45 | 160 |
Msa1393900 | MtrunA17_Chr2g0301581 | 33.702 | 362 | 186 | 14 | 81 | 425 | 28 | 352 | 8.90e-45 | 159 |
Msa1393900 | MtrunA17_Chr2g0283511 | 30.726 | 358 | 204 | 12 | 92 | 428 | 36 | 370 | 1.14e-44 | 160 |
Msa1393900 | MtrunA17_Chr2g0317271 | 31.755 | 359 | 193 | 10 | 83 | 424 | 26 | 349 | 9.07e-44 | 157 |
Msa1393900 | MtrunA17_Chr2g0317261 | 31.755 | 359 | 193 | 10 | 83 | 424 | 26 | 349 | 1.08e-43 | 156 |
Msa1393900 | MtrunA17_Chr3g0093031 | 32.603 | 365 | 194 | 15 | 83 | 424 | 26 | 361 | 1.99e-43 | 156 |
Msa1393900 | MtrunA17_Chr2g0301541 | 33.149 | 362 | 188 | 14 | 81 | 425 | 28 | 352 | 3.89e-43 | 155 |
Msa1393900 | MtrunA17_Chr0c01g0489581 | 31.755 | 359 | 193 | 10 | 83 | 424 | 26 | 349 | 5.34e-43 | 154 |
Msa1393900 | MtrunA17_Chr0c01g0489571 | 31.755 | 359 | 193 | 10 | 83 | 424 | 26 | 349 | 1.31e-42 | 154 |
Msa1393900 | MtrunA17_Chr3g0112691 | 32.698 | 367 | 189 | 17 | 83 | 424 | 26 | 359 | 7.87e-39 | 144 |
Msa1393900 | MtrunA17_Chr3g0096551 | 31.217 | 378 | 194 | 15 | 83 | 424 | 25 | 372 | 5.66e-37 | 139 |
Msa1393900 | MtrunA17_Chr4g0068441 | 29.261 | 352 | 210 | 11 | 84 | 423 | 32 | 356 | 2.34e-36 | 137 |
Msa1393900 | MtrunA17_Chr2g0294311 | 28.767 | 365 | 199 | 12 | 86 | 423 | 31 | 361 | 2.07e-34 | 132 |
Msa1393900 | MtrunA17_Chr4g0027521 | 29.428 | 367 | 199 | 14 | 86 | 433 | 26 | 351 | 2.05e-32 | 125 |
Msa1393900 | MtrunA17_Chr5g0405821 | 28.571 | 350 | 212 | 12 | 86 | 423 | 42 | 365 | 2.29e-32 | 126 |
Msa1393900 | MtrunA17_Chr3g0131321 | 30.747 | 348 | 202 | 11 | 85 | 419 | 32 | 353 | 1.07e-31 | 124 |
Msa1393900 | MtrunA17_Chr5g0396511 | 27.746 | 346 | 210 | 11 | 89 | 422 | 48 | 365 | 2.08e-31 | 124 |
Msa1393900 | MtrunA17_Chr8g0344931 | 29.429 | 350 | 189 | 10 | 87 | 419 | 37 | 345 | 3.25e-31 | 122 |
Msa1393900 | MtrunA17_Chr8g0344941 | 30.145 | 345 | 200 | 14 | 87 | 418 | 41 | 357 | 3.67e-31 | 123 |
Msa1393900 | MtrunA17_Chr8g0374101 | 29.396 | 364 | 198 | 14 | 87 | 424 | 37 | 367 | 7.11e-31 | 122 |
Msa1393900 | MtrunA17_Chr1g0156901 | 29.360 | 344 | 206 | 12 | 84 | 417 | 47 | 363 | 1.29e-30 | 121 |
Msa1393900 | MtrunA17_Chr8g0341001 | 29.651 | 344 | 203 | 13 | 86 | 417 | 31 | 347 | 1.35e-30 | 120 |
Msa1393900 | MtrunA17_Chr3g0120861 | 27.826 | 345 | 207 | 12 | 86 | 417 | 37 | 352 | 2.35e-30 | 120 |
Msa1393900 | MtrunA17_Chr2g0301641 | 28.406 | 345 | 215 | 10 | 87 | 422 | 43 | 364 | 2.51e-30 | 121 |
Msa1393900 | MtrunA17_Chr8g0371471 | 29.379 | 354 | 206 | 14 | 84 | 423 | 38 | 361 | 4.55e-30 | 119 |
Msa1393900 | MtrunA17_Chr1g0156891 | 26.230 | 366 | 227 | 13 | 73 | 423 | 26 | 363 | 8.29e-30 | 119 |
Msa1393900 | MtrunA17_Chr8g0349341 | 28.655 | 342 | 206 | 13 | 87 | 419 | 37 | 349 | 1.14e-29 | 118 |
Msa1393900 | MtrunA17_Chr3g0142921 | 27.381 | 336 | 208 | 9 | 83 | 408 | 32 | 341 | 2.27e-29 | 117 |
Msa1393900 | MtrunA17_Chr2g0330781 | 29.513 | 349 | 199 | 15 | 86 | 418 | 30 | 347 | 2.92e-29 | 117 |
Msa1393900 | MtrunA17_Chr7g0275021 | 29.132 | 357 | 201 | 14 | 87 | 424 | 34 | 357 | 7.80e-29 | 116 |
Msa1393900 | MtrunA17_Chr1g0156911 | 26.765 | 340 | 214 | 11 | 84 | 414 | 34 | 347 | 9.96e-29 | 115 |
Msa1393900 | MtrunA17_Chr2g0283191 | 28.286 | 350 | 206 | 13 | 86 | 415 | 37 | 361 | 1.60e-28 | 115 |
Msa1393900 | MtrunA17_Chr8g0371481 | 28.451 | 355 | 209 | 13 | 84 | 423 | 38 | 362 | 2.80e-28 | 114 |
Msa1393900 | MtrunA17_Chr2g0294301 | 28.099 | 363 | 194 | 12 | 87 | 423 | 35 | 356 | 4.52e-28 | 114 |
Msa1393900 | MtrunA17_Chr3g0142941 | 28.448 | 348 | 206 | 12 | 83 | 417 | 43 | 360 | 4.82e-28 | 114 |
Msa1393900 | MtrunA17_Chr2g0301591 | 32.384 | 281 | 139 | 9 | 81 | 342 | 28 | 276 | 5.13e-28 | 112 |
Msa1393900 | MtrunA17_Chr5g0432101 | 29.888 | 358 | 183 | 13 | 84 | 414 | 30 | 346 | 8.82e-28 | 113 |
Msa1393900 | MtrunA17_Chr5g0438621 | 26.957 | 345 | 214 | 12 | 84 | 417 | 27 | 344 | 1.02e-27 | 112 |
Msa1393900 | MtrunA17_Chr5g0438631 | 27.405 | 343 | 212 | 11 | 86 | 417 | 27 | 343 | 1.39e-27 | 112 |
Msa1393900 | MtrunA17_Chr8g0371491 | 27.714 | 350 | 213 | 13 | 86 | 423 | 35 | 356 | 1.97e-27 | 112 |
Msa1393900 | MtrunA17_Chr2g0301551 | 29.221 | 308 | 170 | 11 | 133 | 426 | 36 | 309 | 2.29e-27 | 111 |
Msa1393900 | MtrunA17_Chr3g0105401 | 27.246 | 345 | 210 | 11 | 86 | 417 | 27 | 343 | 2.32e-27 | 112 |
Msa1393900 | MtrunA17_Chr8g0380041 | 26.975 | 367 | 219 | 12 | 86 | 436 | 30 | 363 | 3.98e-27 | 111 |
Msa1393900 | MtrunA17_Chr1g0156931 | 27.874 | 348 | 207 | 14 | 83 | 417 | 37 | 353 | 5.40e-27 | 111 |
Msa1393900 | MtrunA17_Chr2g0283541 | 29.075 | 227 | 149 | 6 | 204 | 427 | 76 | 293 | 5.95e-26 | 107 |
Msa1393900 | MtrunA17_Chr8g0349321 | 26.420 | 352 | 207 | 12 | 87 | 422 | 37 | 352 | 8.53e-26 | 107 |
Msa1393900 | MtrunA17_Chr4g0046151 | 27.666 | 347 | 208 | 15 | 87 | 415 | 36 | 357 | 1.10e-25 | 107 |
Msa1393900 | MtrunA17_Chr2g0301571 | 28.571 | 308 | 172 | 11 | 133 | 426 | 36 | 309 | 1.90e-25 | 105 |
Msa1393900 | MtrunA17_Chr1g0156921 | 26.361 | 349 | 213 | 12 | 83 | 417 | 38 | 356 | 2.60e-25 | 106 |
Msa1393900 | MtrunA17_Chr7g0275011 | 28.857 | 350 | 199 | 13 | 87 | 419 | 34 | 350 | 2.78e-25 | 106 |
Msa1393900 | MtrunA17_Chr3g0104831 | 27.645 | 293 | 180 | 9 | 145 | 424 | 24 | 297 | 5.58e-25 | 104 |
Msa1393900 | MtrunA17_Chr2g0320671 | 28.000 | 350 | 210 | 14 | 86 | 422 | 29 | 349 | 5.70e-25 | 105 |
Msa1393900 | MtrunA17_Chr8g0349301 | 28.716 | 296 | 186 | 9 | 87 | 378 | 37 | 311 | 7.44e-25 | 104 |
Msa1393900 | MtrunA17_Chr3g0092131 | 27.326 | 344 | 204 | 13 | 89 | 417 | 25 | 337 | 9.20e-25 | 104 |
Msa1393900 | MtrunA17_Chr8g0349331 | 26.979 | 341 | 189 | 11 | 87 | 422 | 35 | 320 | 1.57e-24 | 103 |
Msa1393900 | MtrunA17_Chr1g0157001 | 30.060 | 336 | 197 | 15 | 92 | 417 | 41 | 348 | 3.86e-24 | 103 |
Msa1393900 | MtrunA17_Chr2g0285061 | 25.485 | 361 | 221 | 11 | 86 | 432 | 31 | 357 | 5.98e-24 | 102 |
Msa1393900 | MtrunA17_Chr5g0438641 | 25.287 | 348 | 212 | 12 | 86 | 417 | 31 | 346 | 7.41e-24 | 102 |
Msa1393900 | MtrunA17_Chr4g0008851 | 26.705 | 352 | 206 | 11 | 87 | 419 | 32 | 350 | 1.46e-23 | 101 |
Msa1393900 | MtrunA17_Chr5g0405831 | 26.361 | 349 | 222 | 12 | 85 | 423 | 41 | 364 | 4.19e-23 | 100 |
Msa1393900 | MtrunA17_Chr1g0189901 | 27.401 | 354 | 211 | 11 | 87 | 424 | 31 | 354 | 1.14e-22 | 99.0 |
Msa1393900 | MtrunA17_Chr7g0274991 | 25.843 | 356 | 214 | 12 | 87 | 424 | 33 | 356 | 2.66e-22 | 97.8 |
Msa1393900 | MtrunA17_Chr5g0420811 | 27.195 | 353 | 214 | 13 | 86 | 430 | 32 | 349 | 2.92e-22 | 97.4 |
Msa1393900 | MtrunA17_Chr4g0060811 | 27.273 | 341 | 208 | 12 | 89 | 417 | 29 | 341 | 3.63e-22 | 97.4 |
Msa1393900 | MtrunA17_Chr4g0017431 | 24.207 | 347 | 229 | 9 | 86 | 423 | 30 | 351 | 8.57e-22 | 96.3 |
Msa1393900 | MtrunA17_Chr5g0434621 | 27.114 | 343 | 202 | 12 | 91 | 418 | 29 | 338 | 1.10e-21 | 95.9 |
Msa1393900 | MtrunA17_Chr5g0444401 | 26.050 | 357 | 216 | 11 | 86 | 424 | 27 | 353 | 1.38e-21 | 95.5 |
Msa1393900 | MtrunA17_Chr3g0099161 | 25.915 | 355 | 219 | 10 | 86 | 424 | 91 | 417 | 1.58e-21 | 96.3 |
Msa1393900 | MtrunA17_Chr3g0077581 | 26.575 | 365 | 222 | 13 | 86 | 433 | 35 | 370 | 2.10e-21 | 95.1 |
Msa1393900 | MtrunA17_Chr7g0275001 | 27.299 | 348 | 208 | 11 | 87 | 419 | 25 | 342 | 2.71e-21 | 94.7 |
Msa1393900 | MtrunA17_Chr3g0085881 | 28.909 | 339 | 184 | 13 | 86 | 410 | 32 | 327 | 2.89e-21 | 94.7 |
Msa1393900 | MtrunA17_Chr1g0189891 | 27.429 | 350 | 199 | 14 | 87 | 419 | 29 | 340 | 3.74e-21 | 94.4 |
Msa1393900 | MtrunA17_Chr3g0086641 | 23.944 | 355 | 233 | 8 | 86 | 432 | 37 | 362 | 6.50e-21 | 94.0 |
Msa1393900 | MtrunA17_Chr1g0189931 | 26.724 | 348 | 209 | 12 | 87 | 419 | 32 | 348 | 9.38e-21 | 93.2 |
Msa1393900 | MtrunA17_Chr7g0215961 | 26.136 | 352 | 205 | 13 | 87 | 424 | 33 | 343 | 1.03e-20 | 93.2 |
Msa1393900 | MtrunA17_Chr3g0077571 | 26.377 | 345 | 217 | 8 | 84 | 420 | 27 | 342 | 6.73e-20 | 90.5 |
Msa1393900 | MtrunA17_Chr5g0437421 | 26.567 | 335 | 207 | 12 | 86 | 406 | 31 | 340 | 1.14e-19 | 90.1 |
Msa1393900 | MtrunA17_Chr3g0099231 | 24.370 | 357 | 221 | 12 | 86 | 424 | 27 | 352 | 1.23e-19 | 90.1 |
Msa1393900 | MtrunA17_Chr3g0099151 | 24.860 | 358 | 220 | 12 | 86 | 424 | 86 | 413 | 1.46e-19 | 90.5 |
Msa1393900 | MtrunA17_Chr6g0457921 | 26.420 | 352 | 210 | 13 | 91 | 424 | 33 | 353 | 2.84e-19 | 89.0 |
Msa1393900 | MtrunA17_Chr2g0284951 | 26.549 | 339 | 200 | 13 | 86 | 413 | 32 | 332 | 4.06e-17 | 82.8 |
Msa1393900 | MtrunA17_Chr1g0191501 | 80.488 | 41 | 8 | 0 | 356 | 396 | 1 | 41 | 4.22e-17 | 76.3 |
Msa1393900 | MtrunA17_Chr8g0380031 | 25.291 | 344 | 200 | 13 | 86 | 414 | 83 | 384 | 4.74e-17 | 82.8 |
Msa1393900 | MtrunA17_Chr2g0284991 | 23.167 | 341 | 219 | 9 | 86 | 416 | 32 | 339 | 1.52e-16 | 80.9 |
Msa1393900 | MtrunA17_Chr8g0370961 | 25.714 | 245 | 143 | 6 | 182 | 419 | 17 | 229 | 4.20e-16 | 77.8 |
Msa1393900 | MtrunA17_Chr8g0370951 | 25.815 | 368 | 202 | 15 | 83 | 420 | 27 | 353 | 5.48e-16 | 79.3 |
Msa1393900 | MtrunA17_Chr3g0104801 | 48.387 | 93 | 41 | 3 | 83 | 170 | 40 | 130 | 2.28e-15 | 73.9 |
Msa1393900 | MtrunA17_Chr2g0285001 | 25.294 | 340 | 210 | 11 | 86 | 414 | 32 | 338 | 4.43e-15 | 76.6 |
Msa1393900 | MtrunA17_Chr2g0284921 | 24.501 | 351 | 206 | 13 | 81 | 413 | 28 | 337 | 1.80e-14 | 74.7 |
Msa1393900 | MtrunA17_Chr2g0301561 | 27.826 | 230 | 143 | 7 | 133 | 350 | 36 | 254 | 1.89e-14 | 73.2 |
Msa1393900 | MtrunA17_Chr1g0191491 | 69.048 | 42 | 13 | 0 | 259 | 300 | 50 | 91 | 5.40e-14 | 67.4 |
Msa1393900 | MtrunA17_Chr4g0027571 | 25.837 | 209 | 134 | 4 | 213 | 417 | 23 | 214 | 1.26e-13 | 70.1 |
Msa1393900 | MtrunA17_Chr1g0178941 | 24.576 | 354 | 209 | 15 | 83 | 416 | 34 | 349 | 6.84e-13 | 69.7 |
Msa1393900 | MtrunA17_Chr7g0229581 | 28.395 | 162 | 99 | 3 | 261 | 422 | 8 | 152 | 1.91e-12 | 65.1 |
Msa1393900 | MtrunA17_Chr8g0370981 | 24.416 | 385 | 216 | 14 | 86 | 419 | 43 | 403 | 1.34e-11 | 66.2 |
Msa1393900 | MtrunA17_Chr1g0178931 | 23.055 | 347 | 215 | 13 | 83 | 416 | 31 | 338 | 8.21e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1393900 | AT1G54790.3 | 75.000 | 356 | 89 | 0 | 83 | 438 | 28 | 383 | 0.0 | 585 |
Msa1393900 | AT1G54790.1 | 63.593 | 423 | 102 | 1 | 16 | 438 | 12 | 382 | 0.0 | 568 |
Msa1393900 | AT1G54790.2 | 59.911 | 449 | 102 | 2 | 16 | 438 | 12 | 408 | 0.0 | 554 |
Msa1393900 | AT3G05180.1 | 64.327 | 342 | 118 | 4 | 84 | 423 | 33 | 372 | 9.56e-156 | 446 |
Msa1393900 | AT1G09390.1 | 49.123 | 342 | 156 | 6 | 86 | 425 | 36 | 361 | 2.37e-107 | 322 |
Msa1393900 | AT1G56670.1 | 48.387 | 341 | 160 | 6 | 86 | 425 | 39 | 364 | 7.06e-106 | 318 |
Msa1393900 | AT3G26430.1 | 46.023 | 352 | 180 | 7 | 84 | 429 | 28 | 375 | 8.79e-102 | 308 |
Msa1393900 | AT5G14450.1 | 43.804 | 347 | 183 | 7 | 85 | 425 | 39 | 379 | 8.76e-98 | 298 |
Msa1393900 | AT3G62280.1 | 45.161 | 341 | 167 | 6 | 86 | 424 | 35 | 357 | 9.60e-97 | 295 |
Msa1393900 | AT1G67830.1 | 42.690 | 342 | 186 | 7 | 84 | 419 | 27 | 364 | 3.37e-93 | 286 |
Msa1393900 | AT3G27950.1 | 46.286 | 350 | 167 | 7 | 84 | 426 | 29 | 364 | 6.23e-91 | 280 |
Msa1393900 | AT4G01130.1 | 41.026 | 351 | 192 | 6 | 84 | 426 | 31 | 374 | 1.56e-81 | 256 |
Msa1393900 | AT1G56670.2 | 48.699 | 269 | 124 | 7 | 86 | 350 | 39 | 297 | 1.15e-74 | 236 |
Msa1393900 | AT3G62280.2 | 43.173 | 271 | 142 | 4 | 86 | 354 | 35 | 295 | 3.54e-68 | 219 |
Msa1393900 | AT4G01130.3 | 37.586 | 290 | 175 | 4 | 141 | 426 | 1 | 288 | 5.18e-60 | 198 |
Msa1393900 | AT2G27360.1 | 34.530 | 362 | 199 | 12 | 84 | 427 | 30 | 371 | 1.01e-53 | 184 |
Msa1393900 | AT1G28610.2 | 33.520 | 358 | 204 | 10 | 84 | 426 | 28 | 366 | 3.75e-50 | 174 |
Msa1393900 | AT1G31550.2 | 34.160 | 363 | 195 | 14 | 84 | 426 | 33 | 371 | 5.27e-50 | 174 |
Msa1393900 | AT4G01130.2 | 38.909 | 275 | 153 | 6 | 84 | 350 | 31 | 298 | 1.07e-49 | 172 |
Msa1393900 | AT1G28600.1 | 32.603 | 365 | 198 | 14 | 84 | 426 | 28 | 366 | 6.05e-49 | 172 |
Msa1393900 | AT1G28580.1 | 33.062 | 369 | 192 | 14 | 84 | 426 | 34 | 373 | 2.28e-47 | 167 |
Msa1393900 | AT1G28590.1 | 32.873 | 362 | 202 | 13 | 84 | 426 | 33 | 372 | 5.73e-47 | 167 |
Msa1393900 | AT1G31550.1 | 33.425 | 362 | 196 | 15 | 84 | 426 | 33 | 368 | 9.30e-47 | 166 |
Msa1393900 | AT3G48460.1 | 32.787 | 366 | 195 | 13 | 85 | 428 | 36 | 372 | 2.02e-46 | 164 |
Msa1393900 | AT1G28650.1 | 32.213 | 357 | 209 | 11 | 85 | 426 | 35 | 373 | 5.92e-46 | 164 |
Msa1393900 | AT1G28570.1 | 32.410 | 361 | 205 | 14 | 84 | 426 | 31 | 370 | 7.48e-46 | 163 |
Msa1393900 | AT1G28640.1 | 31.956 | 363 | 204 | 11 | 84 | 426 | 32 | 371 | 6.31e-43 | 155 |
Msa1393900 | AT1G28670.1 | 32.312 | 359 | 209 | 11 | 84 | 426 | 32 | 372 | 1.29e-41 | 152 |
Msa1393900 | AT5G45910.1 | 31.016 | 374 | 202 | 13 | 83 | 427 | 26 | 372 | 3.45e-41 | 150 |
Msa1393900 | AT1G28660.1 | 32.329 | 365 | 200 | 13 | 84 | 426 | 32 | 371 | 1.82e-39 | 146 |
Msa1393900 | AT1G28660.2 | 31.868 | 364 | 202 | 13 | 84 | 426 | 32 | 370 | 6.28e-39 | 144 |
Msa1393900 | AT4G10950.2 | 26.273 | 373 | 225 | 10 | 68 | 423 | 52 | 391 | 4.55e-32 | 126 |
Msa1393900 | AT2G40250.1 | 28.696 | 345 | 200 | 10 | 87 | 414 | 36 | 351 | 5.92e-32 | 125 |
Msa1393900 | AT3G16370.1 | 28.324 | 346 | 215 | 10 | 86 | 422 | 29 | 350 | 7.66e-32 | 124 |
Msa1393900 | AT1G28580.2 | 30.769 | 312 | 176 | 13 | 131 | 426 | 5 | 292 | 2.21e-31 | 122 |
Msa1393900 | AT2G23540.1 | 29.330 | 358 | 194 | 15 | 87 | 419 | 48 | 371 | 3.88e-31 | 123 |
Msa1393900 | AT5G22810.1 | 30.286 | 350 | 205 | 13 | 86 | 422 | 33 | 356 | 1.59e-30 | 121 |
Msa1393900 | AT5G15720.1 | 29.609 | 358 | 202 | 13 | 86 | 424 | 29 | 355 | 7.34e-30 | 119 |
Msa1393900 | AT4G10950.1 | 25.587 | 383 | 228 | 12 | 58 | 423 | 45 | 387 | 7.86e-29 | 117 |
Msa1393900 | AT5G42170.1 | 28.363 | 342 | 212 | 12 | 83 | 417 | 46 | 361 | 1.53e-28 | 115 |
Msa1393900 | AT5G03810.1 | 27.299 | 348 | 206 | 12 | 86 | 417 | 29 | 345 | 3.48e-28 | 114 |
Msa1393900 | AT2G04570.1 | 27.066 | 351 | 210 | 13 | 86 | 421 | 27 | 346 | 5.27e-28 | 114 |
Msa1393900 | AT1G28570.2 | 31.304 | 230 | 140 | 9 | 204 | 426 | 80 | 298 | 7.47e-28 | 113 |
Msa1393900 | AT1G20120.1 | 27.920 | 351 | 201 | 12 | 85 | 417 | 76 | 392 | 1.06e-27 | 114 |
Msa1393900 | AT3G14225.1 | 30.526 | 380 | 201 | 17 | 84 | 438 | 34 | 375 | 1.17e-27 | 113 |
Msa1393900 | AT4G26790.1 | 26.957 | 345 | 212 | 10 | 85 | 417 | 27 | 343 | 1.27e-27 | 113 |
Msa1393900 | AT4G26790.2 | 26.957 | 345 | 212 | 10 | 85 | 417 | 27 | 343 | 1.27e-27 | 113 |
Msa1393900 | AT3G14225.2 | 30.851 | 376 | 201 | 15 | 84 | 438 | 34 | 371 | 2.56e-27 | 112 |
Msa1393900 | AT1G20132.1 | 28.653 | 349 | 206 | 12 | 86 | 421 | 60 | 378 | 3.29e-27 | 112 |
Msa1393900 | AT5G08460.1 | 29.444 | 360 | 200 | 13 | 85 | 423 | 47 | 373 | 4.54e-27 | 112 |
Msa1393900 | AT1G28570.3 | 32.075 | 212 | 127 | 8 | 221 | 426 | 7 | 207 | 1.51e-26 | 107 |
Msa1393900 | AT3G14820.1 | 27.941 | 340 | 213 | 10 | 84 | 417 | 29 | 342 | 2.10e-26 | 109 |
Msa1393900 | AT1G53940.2 | 31.054 | 351 | 200 | 14 | 84 | 419 | 36 | 359 | 2.47e-26 | 110 |
Msa1393900 | AT3G50400.1 | 28.291 | 357 | 200 | 14 | 87 | 419 | 34 | 358 | 3.15e-26 | 109 |
Msa1393900 | AT1G71120.1 | 25.507 | 345 | 214 | 10 | 86 | 419 | 30 | 342 | 5.37e-26 | 108 |
Msa1393900 | AT1G29670.1 | 26.667 | 360 | 216 | 12 | 86 | 432 | 31 | 355 | 6.82e-26 | 108 |
Msa1393900 | AT4G28780.1 | 28.249 | 354 | 208 | 14 | 87 | 424 | 31 | 354 | 1.90e-25 | 107 |
Msa1393900 | AT1G20130.2 | 27.011 | 348 | 222 | 11 | 85 | 421 | 182 | 508 | 2.04e-25 | 108 |
Msa1393900 | AT1G29670.2 | 26.667 | 360 | 216 | 12 | 86 | 432 | 99 | 423 | 2.17e-25 | 108 |
Msa1393900 | AT1G20130.1 | 27.011 | 348 | 222 | 11 | 85 | 421 | 202 | 528 | 2.28e-25 | 108 |
Msa1393900 | AT1G59406.1 | 28.655 | 342 | 205 | 13 | 86 | 417 | 29 | 341 | 2.84e-25 | 106 |
Msa1393900 | AT1G59030.1 | 28.655 | 342 | 205 | 13 | 86 | 417 | 29 | 341 | 2.84e-25 | 106 |
Msa1393900 | AT1G58725.1 | 28.655 | 342 | 205 | 13 | 86 | 417 | 29 | 341 | 2.84e-25 | 106 |
Msa1393900 | AT5G63170.1 | 28.152 | 341 | 195 | 10 | 79 | 408 | 20 | 321 | 3.19e-25 | 106 |
Msa1393900 | AT5G03820.1 | 26.496 | 351 | 206 | 14 | 86 | 417 | 32 | 349 | 4.32e-25 | 105 |
Msa1393900 | AT5G45950.1 | 25.364 | 343 | 216 | 10 | 84 | 417 | 37 | 348 | 6.19e-25 | 105 |
Msa1393900 | AT2G42990.1 | 28.280 | 343 | 204 | 12 | 86 | 415 | 27 | 340 | 6.54e-25 | 105 |
Msa1393900 | AT5G03820.2 | 26.420 | 352 | 207 | 14 | 86 | 418 | 60 | 378 | 9.15e-25 | 105 |
Msa1393900 | AT3G53100.1 | 26.979 | 341 | 215 | 12 | 86 | 417 | 28 | 343 | 1.25e-24 | 104 |
Msa1393900 | AT5G40990.1 | 29.396 | 364 | 222 | 13 | 84 | 438 | 34 | 371 | 1.32e-24 | 105 |
Msa1393900 | AT1G75890.2 | 27.353 | 340 | 212 | 12 | 86 | 415 | 46 | 360 | 1.33e-24 | 104 |
Msa1393900 | AT1G53920.1 | 27.247 | 356 | 207 | 11 | 84 | 421 | 45 | 366 | 2.16e-24 | 104 |
Msa1393900 | AT4G18970.1 | 24.722 | 360 | 231 | 11 | 86 | 435 | 27 | 356 | 2.31e-24 | 103 |
Msa1393900 | AT1G75890.3 | 27.353 | 340 | 212 | 12 | 86 | 415 | 75 | 389 | 2.78e-24 | 104 |
Msa1393900 | AT4G18970.2 | 24.722 | 360 | 231 | 11 | 86 | 435 | 27 | 356 | 3.61e-24 | 104 |
Msa1393900 | AT1G75880.2 | 27.485 | 342 | 212 | 12 | 86 | 417 | 51 | 366 | 4.95e-24 | 103 |
Msa1393900 | AT3G04290.1 | 26.496 | 351 | 218 | 10 | 87 | 424 | 29 | 352 | 6.32e-24 | 102 |
Msa1393900 | AT1G71691.2 | 26.608 | 342 | 215 | 10 | 86 | 419 | 54 | 367 | 6.40e-24 | 103 |
Msa1393900 | AT1G71250.1 | 26.462 | 359 | 222 | 10 | 78 | 423 | 32 | 361 | 9.62e-24 | 102 |
Msa1393900 | AT1G75900.1 | 27.557 | 352 | 204 | 13 | 83 | 417 | 39 | 356 | 1.31e-23 | 102 |
Msa1393900 | AT1G29660.1 | 26.301 | 365 | 224 | 12 | 86 | 436 | 31 | 364 | 1.70e-23 | 101 |
Msa1393900 | AT1G75890.1 | 27.168 | 346 | 218 | 13 | 86 | 415 | 46 | 373 | 1.75e-23 | 101 |
Msa1393900 | AT2G30220.1 | 28.286 | 350 | 201 | 13 | 85 | 416 | 31 | 348 | 1.98e-23 | 101 |
Msa1393900 | AT1G75880.1 | 27.405 | 343 | 212 | 13 | 86 | 417 | 51 | 367 | 3.30e-23 | 100 |
Msa1393900 | AT1G73610.1 | 27.941 | 340 | 198 | 9 | 87 | 417 | 35 | 336 | 3.68e-23 | 100 |
Msa1393900 | AT5G18430.1 | 26.611 | 357 | 212 | 14 | 87 | 424 | 28 | 353 | 1.25e-22 | 99.0 |
Msa1393900 | AT1G33811.1 | 27.299 | 348 | 225 | 12 | 86 | 424 | 33 | 361 | 1.81e-22 | 98.6 |
Msa1393900 | AT2G30310.1 | 26.629 | 353 | 199 | 12 | 85 | 414 | 32 | 347 | 5.46e-22 | 97.1 |
Msa1393900 | AT5G15720.3 | 28.094 | 299 | 176 | 10 | 139 | 424 | 52 | 324 | 8.31e-22 | 96.3 |
Msa1393900 | AT1G06990.1 | 25.298 | 336 | 212 | 10 | 85 | 408 | 35 | 343 | 8.74e-22 | 96.7 |
Msa1393900 | AT5G33370.1 | 26.849 | 365 | 217 | 13 | 78 | 424 | 21 | 353 | 1.16e-21 | 96.3 |
Msa1393900 | AT5G45670.1 | 23.757 | 362 | 232 | 11 | 86 | 435 | 28 | 357 | 1.25e-21 | 96.3 |
Msa1393900 | AT1G58520.3 | 28.035 | 346 | 197 | 15 | 85 | 417 | 28 | 334 | 1.40e-21 | 95.9 |
Msa1393900 | AT1G58525.1 | 28.035 | 346 | 197 | 15 | 85 | 417 | 28 | 334 | 1.40e-21 | 95.9 |
Msa1393900 | AT1G74460.1 | 27.299 | 348 | 199 | 14 | 89 | 417 | 25 | 337 | 2.27e-21 | 95.5 |
Msa1393900 | AT5G45960.1 | 25.378 | 331 | 213 | 13 | 87 | 406 | 47 | 354 | 2.66e-21 | 95.5 |
Msa1393900 | AT5G41890.1 | 25.205 | 365 | 201 | 13 | 89 | 419 | 33 | 359 | 1.90e-20 | 92.8 |
Msa1393900 | AT5G15720.2 | 29.433 | 282 | 164 | 10 | 86 | 350 | 29 | 292 | 2.46e-20 | 91.7 |
Msa1393900 | AT2G31540.1 | 25.479 | 365 | 207 | 14 | 85 | 422 | 33 | 359 | 3.24e-20 | 92.0 |
Msa1393900 | AT1G23500.1 | 27.457 | 346 | 197 | 11 | 87 | 419 | 35 | 339 | 3.56e-20 | 91.7 |
Msa1393900 | AT1G20135.1 | 27.003 | 337 | 200 | 9 | 85 | 412 | 27 | 326 | 4.55e-20 | 91.3 |
Msa1393900 | AT1G54030.1 | 27.711 | 332 | 189 | 11 | 88 | 412 | 53 | 340 | 1.33e-19 | 90.9 |
Msa1393900 | AT2G19060.1 | 25.745 | 369 | 212 | 14 | 71 | 424 | 20 | 341 | 1.51e-19 | 90.1 |
Msa1393900 | AT2G03980.2 | 31.679 | 262 | 152 | 10 | 84 | 336 | 40 | 283 | 1.99e-19 | 89.7 |
Msa1393900 | AT2G03980.3 | 31.679 | 262 | 152 | 10 | 84 | 336 | 40 | 283 | 1.99e-19 | 89.7 |
Msa1393900 | AT2G03980.1 | 31.679 | 262 | 152 | 10 | 84 | 336 | 40 | 283 | 1.99e-19 | 89.7 |
Msa1393900 | AT2G03980.4 | 31.679 | 262 | 152 | 10 | 84 | 336 | 40 | 283 | 1.99e-19 | 89.7 |
Msa1393900 | AT2G19050.1 | 26.124 | 356 | 201 | 13 | 86 | 424 | 30 | 340 | 2.45e-19 | 89.4 |
Msa1393900 | AT1G58430.1 | 24.069 | 349 | 209 | 11 | 85 | 412 | 33 | 346 | 3.45e-19 | 89.0 |
Msa1393900 | AT1G75910.1 | 24.784 | 347 | 212 | 10 | 84 | 417 | 25 | 335 | 4.88e-19 | 88.2 |
Msa1393900 | AT1G75930.1 | 27.526 | 287 | 184 | 9 | 84 | 359 | 26 | 299 | 1.81e-18 | 86.7 |
Msa1393900 | AT2G24560.1 | 24.490 | 343 | 215 | 12 | 85 | 412 | 32 | 345 | 2.30e-18 | 86.7 |
Msa1393900 | AT1G75920.2 | 24.855 | 346 | 212 | 11 | 84 | 417 | 26 | 335 | 2.61e-18 | 86.3 |
Msa1393900 | AT1G54020.2 | 25.291 | 344 | 207 | 10 | 84 | 417 | 28 | 331 | 3.46e-18 | 86.3 |
Msa1393900 | AT5G55050.1 | 28.533 | 375 | 217 | 16 | 69 | 424 | 25 | 367 | 9.32e-18 | 85.1 |
Msa1393900 | AT1G53990.1 | 27.807 | 374 | 210 | 15 | 84 | 436 | 32 | 366 | 1.24e-17 | 84.3 |
Msa1393900 | AT3G14220.1 | 26.211 | 351 | 198 | 15 | 86 | 419 | 31 | 337 | 3.48e-17 | 83.2 |
Msa1393900 | AT1G28600.2 | 33.684 | 190 | 98 | 9 | 84 | 258 | 28 | 204 | 4.46e-17 | 80.5 |
Msa1393900 | AT1G71691.1 | 25.170 | 294 | 172 | 10 | 139 | 419 | 8 | 266 | 4.80e-17 | 81.6 |
Msa1393900 | AT1G71691.3 | 27.106 | 273 | 176 | 8 | 86 | 350 | 54 | 311 | 7.60e-17 | 81.6 |
Msa1393900 | AT1G54010.1 | 26.765 | 340 | 198 | 14 | 84 | 410 | 31 | 332 | 1.79e-16 | 81.3 |
Msa1393900 | AT5G03980.1 | 23.599 | 339 | 201 | 13 | 87 | 418 | 29 | 316 | 8.40e-16 | 78.6 |
Msa1393900 | AT4G16233.1 | 34.400 | 125 | 70 | 2 | 299 | 423 | 6 | 118 | 1.10e-15 | 73.9 |
Msa1393900 | AT1G28610.1 | 32.086 | 187 | 105 | 5 | 84 | 258 | 28 | 204 | 1.27e-15 | 76.6 |
Msa1393900 | AT1G54000.1 | 26.023 | 342 | 196 | 14 | 87 | 413 | 36 | 335 | 1.73e-15 | 78.2 |
Msa1393900 | AT1G53940.1 | 30.142 | 282 | 162 | 11 | 84 | 350 | 36 | 297 | 1.93e-15 | 77.0 |
Msa1393900 | AT5G03610.1 | 24.706 | 340 | 206 | 11 | 88 | 414 | 44 | 346 | 2.19e-15 | 77.8 |
Msa1393900 | AT2G19050.2 | 27.206 | 272 | 153 | 10 | 86 | 340 | 30 | 273 | 9.14e-15 | 74.7 |
Msa1393900 | AT5G37690.1 | 24.837 | 306 | 186 | 11 | 122 | 416 | 66 | 338 | 1.07e-14 | 75.5 |
Msa1393900 | AT2G04020.1 | 32.258 | 217 | 117 | 9 | 84 | 286 | 40 | 240 | 2.49e-13 | 70.1 |
Msa1393900 | AT2G04020.2 | 32.258 | 217 | 117 | 9 | 84 | 286 | 40 | 240 | 3.83e-13 | 70.5 |
Msa1393900 | AT2G31550.1 | 23.497 | 183 | 106 | 5 | 250 | 422 | 60 | 218 | 6.11e-13 | 68.2 |
Msa1393900 | AT3G09930.2 | 23.684 | 342 | 208 | 12 | 88 | 414 | 40 | 343 | 1.76e-12 | 68.9 |
Msa1393900 | AT3G09930.1 | 23.684 | 342 | 208 | 12 | 88 | 414 | 40 | 343 | 1.76e-12 | 68.9 |
Msa1393900 | AT5G37690.2 | 24.354 | 271 | 162 | 10 | 156 | 416 | 93 | 330 | 2.23e-12 | 68.6 |
Msa1393900 | AT5G03600.1 | 24.852 | 338 | 204 | 15 | 86 | 414 | 13 | 309 | 8.38e-12 | 66.6 |
Msa1393900 | AT5G03600.2 | 24.852 | 338 | 204 | 15 | 86 | 414 | 48 | 344 | 1.08e-11 | 66.6 |
Find 124 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTTCTCCTTTGGGATTC+AGG | 0.044235 | tig0021765:-61378 | Msa1393900:CDS |
GCCATTCTTAAATGCATATT+TGG | 0.136590 | tig0021765:-61489 | Msa1393900:CDS |
TTACAACCTTTCCTAAAATT+TGG | 0.148502 | tig0021765:+61452 | None:intergenic |
CCCTCTGCCCTTTCTCCTTT+GGG | 0.151136 | tig0021765:-61385 | Msa1393900:CDS |
AATAAGCACATTATTATTCT+TGG | 0.193684 | tig0021765:+63098 | None:intergenic |
TGATGGATCAGTTCCAAATT+TGG | 0.197023 | tig0021765:+60857 | None:intergenic |
GCTCAGAATGTAGCCAAATT+TGG | 0.208634 | tig0021765:-60870 | Msa1393900:CDS |
TCCCTCTGCCCTTTCTCCTT+TGG | 0.229352 | tig0021765:-61386 | Msa1393900:CDS |
AGAATTTGAATCTGGAATTA+AGG | 0.237994 | tig0021765:-61068 | Msa1393900:intron |
TTTCAGCTTGTTCCACCTTA+TGG | 0.261204 | tig0021765:-62949 | Msa1393900:CDS |
AGCATGAAGTTGTAGGTTAA+AGG | 0.261879 | tig0021765:+60785 | None:intergenic |
CCTAGTTCATCAAGCTTTGA+TGG | 0.273723 | tig0021765:+60840 | None:intergenic |
CGCGCTCTTGAATTGCTTGC+AGG | 0.276885 | tig0021765:-61329 | Msa1393900:CDS |
TACGTATCCGCCACTTAATT+TGG | 0.306008 | tig0021765:-63182 | Msa1393900:five_prime_UTR |
AAATGCATATTTGGATTCAT+TGG | 0.318406 | tig0021765:-61480 | Msa1393900:CDS |
TAGTATAGTATAAATATAAA+AGG | 0.319886 | tig0021765:-63240 | Msa1393900:five_prime_UTR |
TGCTCTGTGTAGTAAATTGC+AGG | 0.331048 | tig0021765:-60766 | Msa1393900:CDS |
TATCCACAACATGCCATAAT+AGG | 0.340753 | tig0021765:+60362 | None:intergenic |
TCAAATTCTAAAAGAATTGT+TGG | 0.351758 | tig0021765:+61082 | None:intergenic |
ATTTGTACATTAATACATTC+AGG | 0.356143 | tig0021765:-59934 | Msa1393900:three_prime_UTR |
TGTAATTGTCGTTCCATTGA+AGG | 0.359086 | tig0021765:+60286 | None:intergenic |
CAACTTAGGTGATTCAAATT+CGG | 0.362793 | tig0021765:-63001 | Msa1393900:CDS |
CCATCACATGCCCTTCCATT+TGG | 0.365221 | tig0021765:+62907 | None:intergenic |
ATTATGGCATGTTGTGGATA+TGG | 0.374728 | tig0021765:-60359 | Msa1393900:CDS |
CACTTAATTTGGTTGATAGT+TGG | 0.375833 | tig0021765:-63171 | Msa1393900:five_prime_UTR |
AATACATTCAGGAGGCTTCA+TGG | 0.378589 | tig0021765:-59923 | Msa1393900:three_prime_UTR |
AGGGTTTGAACAACCTATTA+TGG | 0.383539 | tig0021765:-60375 | Msa1393900:CDS |
CTTTATGTGCTTGTATTGTA+TGG | 0.384323 | tig0021765:-60063 | Msa1393900:three_prime_UTR |
AATGCATATTTGGATTCATT+GGG | 0.397716 | tig0021765:-61479 | Msa1393900:CDS |
ATGCACCAGCAAGATCATTC+TGG | 0.412020 | tig0021765:+61143 | None:intergenic |
CTTGAATTGCTTGCAGGAAA+AGG | 0.426571 | tig0021765:-61323 | Msa1393900:intron |
TTGAAGTAGTTCTGTCCATA+AGG | 0.431121 | tig0021765:+62934 | None:intergenic |
TTTGAAAGTATGAGATGAGT+TGG | 0.433100 | tig0021765:+63143 | None:intergenic |
ACATATGTGACATTTGAATC+TGG | 0.436387 | tig0021765:+60735 | None:intergenic |
GGTTGTAACTTTGCAGCAGC+TGG | 0.442366 | tig0021765:-61437 | Msa1393900:CDS |
TCACCTAAGTTGAAAACTGC+TGG | 0.446971 | tig0021765:+63012 | None:intergenic |
AACTACTTCAAAACTCCAAA+TGG | 0.448519 | tig0021765:-62922 | Msa1393900:CDS |
CCATCAAAGCTTGATGAACT+AGG | 0.448934 | tig0021765:-60840 | Msa1393900:CDS |
GATACACAATACAGGTCCTC+TGG | 0.451058 | tig0021765:-60901 | Msa1393900:CDS |
TACAGGTCCTCTGGGATGCT+TGG | 0.454524 | tig0021765:-60892 | Msa1393900:CDS |
TCCAAATATGCATTTAAGAA+TGG | 0.454805 | tig0021765:+61488 | None:intergenic |
TGTGTCCATTTGGTGGGTAA+AGG | 0.455139 | tig0021765:+61676 | None:intergenic |
ACAGTTCTGAGTATATCAAC+TGG | 0.456549 | tig0021765:-60247 | Msa1393900:CDS |
TACACAGAGCATGAAGTTGT+AGG | 0.457023 | tig0021765:+60778 | None:intergenic |
ACTTACTTTCATCTACCATC+AGG | 0.459639 | tig0021765:-61654 | Msa1393900:CDS |
CATCTCATACTTTCAAACTA+AGG | 0.459964 | tig0021765:-63137 | Msa1393900:five_prime_UTR |
GGGAACACAAAGACCTTCAA+TGG | 0.460647 | tig0021765:-60299 | Msa1393900:CDS |
GGTGAACTTACAGTTGGGTT+GGG | 0.464328 | tig0021765:-62973 | Msa1393900:CDS |
ATTGCAAATTATTCTAGATA+CGG | 0.471729 | tig0021765:-60684 | Msa1393900:intron |
GGAACGACAATTACAGCAAA+AGG | 0.471811 | tig0021765:-60278 | Msa1393900:CDS |
ACCGGCACCCTTGTTACCGC+TGG | 0.474165 | tig0021765:-61708 | Msa1393900:CDS |
CAGAGGGATGATGCAGTGGC+TGG | 0.475339 | tig0021765:+61401 | None:intergenic |
GAAAGCCTTTACCCACCAAA+TGG | 0.484566 | tig0021765:-61681 | Msa1393900:CDS |
ACCTGAATCCCAAAGGAGAA+AGG | 0.487971 | tig0021765:+61377 | None:intergenic |
TTGGAATGGAGGCAAGTACT+TGG | 0.488366 | tig0021765:+61101 | None:intergenic |
ATTGGCCAGAATGATCTTGC+TGG | 0.494393 | tig0021765:-61148 | Msa1393900:CDS |
TGAAAGTAAGTGTGTCCATT+TGG | 0.496953 | tig0021765:+61666 | None:intergenic |
GTTGTTTGCAGTGGATGCAT+TGG | 0.498025 | tig0021765:-61516 | Msa1393900:intron |
TGGTTCACATGTCTATGATA+AGG | 0.501007 | tig0021765:-59903 | Msa1393900:three_prime_UTR |
TTTCAAAACCAGCGGTAACA+AGG | 0.504824 | tig0021765:+61700 | None:intergenic |
GACACAGGTGAACTTACAGT+TGG | 0.510158 | tig0021765:-62979 | Msa1393900:CDS |
GAGCGCGAGCTTTGAACTTG+AGG | 0.512637 | tig0021765:+61345 | None:intergenic |
AACTTGAGCTTGAGAAGGAA+TGG | 0.518487 | tig0021765:+60131 | None:intergenic |
CCTGAATCCCAAAGGAGAAA+GGG | 0.521210 | tig0021765:+61378 | None:intergenic |
CAACTATCAACCAAATTAAG+TGG | 0.523169 | tig0021765:+63172 | None:intergenic |
AGGTGAACTTACAGTTGGGT+TGG | 0.523219 | tig0021765:-62974 | Msa1393900:CDS |
GGATTATACATGTTTGACAT+TGG | 0.523669 | tig0021765:-61166 | Msa1393900:CDS |
GATGAACTAGGATGTGTTAG+TGG | 0.524106 | tig0021765:-60828 | Msa1393900:CDS |
TCATGTTACAATTGAGCTTG+AGG | 0.527883 | tig0021765:+59846 | None:intergenic |
TTCTAAAAGAATTGTTGGAA+TGG | 0.529731 | tig0021765:+61087 | None:intergenic |
TAAAAGAATTGTTGGAATGG+AGG | 0.531513 | tig0021765:+61090 | None:intergenic |
ATCTCATACTTTCAAACTAA+GGG | 0.533073 | tig0021765:-63136 | Msa1393900:five_prime_UTR |
GGTAACAAGGGTGCCGGTGT+CGG | 0.536645 | tig0021765:+61713 | None:intergenic |
ACTCTACTGTCATAGTTCAA+TGG | 0.536947 | tig0021765:+60329 | None:intergenic |
ATGACAGTAGAGTGACTTGT+GGG | 0.545670 | tig0021765:-60319 | Msa1393900:CDS |
TATTTCTGGATACACAATAC+AGG | 0.545778 | tig0021765:-60909 | Msa1393900:CDS |
GTTGCATCACAGATTCTCAC+TGG | 0.548587 | tig0021765:-60188 | Msa1393900:CDS |
ATCTAGAATAATTTGCAATG+AGG | 0.555564 | tig0021765:+60688 | None:intergenic |
TTTAGAACTTGAGCTTGAGA+AGG | 0.563689 | tig0021765:+60126 | None:intergenic |
ACACAGGTGAACTTACAGTT+GGG | 0.567683 | tig0021765:-62978 | Msa1393900:CDS |
TCTGAGTATATCAACTGGGA+TGG | 0.570331 | tig0021765:-60242 | Msa1393900:CDS |
ACCAGCGGTAACAAGGGTGC+CGG | 0.574854 | tig0021765:+61707 | None:intergenic |
TTCAAACTAAGGGCCATGGC+GGG | 0.575921 | tig0021765:-63126 | Msa1393900:exon |
TGATAGAGACTATATGATGA+GGG | 0.576750 | tig0021765:-60939 | Msa1393900:intron |
GGGATGATGCAGTGGCTGGA+AGG | 0.577213 | tig0021765:+61405 | None:intergenic |
TAAGAAAATCAATGATGAGA+CGG | 0.581207 | tig0021765:+61616 | None:intergenic |
ACTTCAAAACTCCAAATGGA+AGG | 0.581393 | tig0021765:-62918 | Msa1393900:CDS |
GGTGATTCAAATTCCGACAC+CGG | 0.586621 | tig0021765:-61726 | Msa1393900:CDS |
CTTACTTTCATCTACCATCA+GGG | 0.587988 | tig0021765:-61653 | Msa1393900:CDS |
AAGTAGTTCTGTCCATAAGG+TGG | 0.589355 | tig0021765:+62937 | None:intergenic |
GGTGATTCAAATTCGGACAC+AGG | 0.594936 | tig0021765:-62994 | Msa1393900:CDS |
TTGATAGAGACTATATGATG+AGG | 0.597221 | tig0021765:-60940 | Msa1393900:intron |
ATTCTTGGAATCACCCGCCA+TGG | 0.603699 | tig0021765:+63113 | None:intergenic |
CCATCAGAGTATCTCCCTGA+TGG | 0.606295 | tig0021765:+61639 | None:intergenic |
ATATATGAATATGATGCTCA+AGG | 0.606900 | tig0021765:+63262 | None:intergenic |
CCAAATGGAAGGGCATGTGA+TGG | 0.608534 | tig0021765:-62907 | Msa1393900:CDS |
TACTTTCAAACTAAGGGCCA+TGG | 0.609071 | tig0021765:-63130 | Msa1393900:exon |
CAACCTATTATGGCATGTTG+TGG | 0.613380 | tig0021765:-60365 | Msa1393900:CDS |
AAGTAAGTGTGTCCATTTGG+TGG | 0.613467 | tig0021765:+61669 | None:intergenic |
CAGTTCTGAGTATATCAACT+GGG | 0.617548 | tig0021765:-60246 | Msa1393900:CDS |
ATACACAATACAGGTCCTCT+GGG | 0.618984 | tig0021765:-60900 | Msa1393900:CDS |
CCCAAAGGAGAAAGGGCAGA+GGG | 0.623206 | tig0021765:+61385 | None:intergenic |
AGGGCAGAGGGATGATGCAG+TGG | 0.626862 | tig0021765:+61397 | None:intergenic |
TTCAAAACCAGCGGTAACAA+GGG | 0.628966 | tig0021765:+61701 | None:intergenic |
TCCCAAAGGAGAAAGGGCAG+AGG | 0.629994 | tig0021765:+61384 | None:intergenic |
ATAGAGACTATATGATGAGG+GGG | 0.637313 | tig0021765:-60937 | Msa1393900:intron |
AGTAAGTGTGTCCATTTGGT+GGG | 0.637897 | tig0021765:+61670 | None:intergenic |
TGTACATTAATACATTCAGG+AGG | 0.638548 | tig0021765:-59931 | Msa1393900:three_prime_UTR |
CTTCAAAACTCCAAATGGAA+GGG | 0.639200 | tig0021765:-62917 | Msa1393900:CDS |
TTTCAAACTAAGGGCCATGG+CGG | 0.642095 | tig0021765:-63127 | Msa1393900:exon |
CCATCAGGGAGATACTCTGA+TGG | 0.649316 | tig0021765:-61639 | Msa1393900:CDS |
CTACTGTCATAGTTCAATGG+TGG | 0.651617 | tig0021765:+60332 | None:intergenic |
GATAGAGACTATATGATGAG+GGG | 0.655430 | tig0021765:-60938 | Msa1393900:intron |
CTATCAACCAAATTAAGTGG+CGG | 0.658914 | tig0021765:+63175 | None:intergenic |
TATGACAGTAGAGTGACTTG+TGG | 0.659401 | tig0021765:-60320 | Msa1393900:CDS |
GCTCTGTGTAGTAAATTGCA+GGG | 0.661282 | tig0021765:-60765 | Msa1393900:CDS |
CTGAGACACCTGAATCCCAA+AGG | 0.666075 | tig0021765:+61370 | None:intergenic |
ATGAACTAGGATGTGTTAGT+GGG | 0.666553 | tig0021765:-60827 | Msa1393900:CDS |
TTAGGAAGTCAACAATGAGA+CGG | 0.673079 | tig0021765:+62884 | None:intergenic |
ATGGCATGTTGTGGATATGG+AGG | 0.676401 | tig0021765:-60356 | Msa1393900:CDS |
TCACTAATGTCAAATTGACA+TGG | 0.677077 | tig0021765:-59986 | Msa1393900:three_prime_UTR |
AATTCTTTAACATCATCACA+CGG | 0.695860 | tig0021765:+59954 | None:intergenic |
TTCTGAGCCAAGCATCCCAG+AGG | 0.701144 | tig0021765:+60885 | None:intergenic |
GTAAAGGCTTTCAAAACCAG+CGG | 0.702326 | tig0021765:+61692 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTTATTTATTTTTTA+AGG | + | tig0021765:60772-60791 | None:intergenic | 0.0% |
!! | TAGTATAGTATAAATATAAA+AGG | - | tig0021765:59889-59908 | Msa1393900:three_prime_UTR | 10.0% |
!!! | TTTTTTTTTCTTTTTCTTTT+TGG | - | tig0021765:60470-60489 | Msa1393900:intron | 10.0% |
!!! | AATTAATGTATTTTTTTTAC+AGG | - | tig0021765:60728-60747 | Msa1393900:CDS | 10.0% |
!! | TAAAAGTAAAATATATTTGT+AGG | - | tig0021765:60790-60809 | Msa1393900:CDS | 10.0% |
!!! | ATCTTATTTAAATATGTTTT+TGG | + | tig0021765:60817-60836 | None:intergenic | 10.0% |
!! | TAAATATCATAACATAAATA+AGG | - | tig0021765:60956-60975 | Msa1393900:intron | 10.0% |
!!! | AAAAAACATATTTCTTTTAC+TGG | + | tig0021765:60438-60457 | None:intergenic | 15.0% |
!! | TACAATGTAAAATATATTTC+AGG | + | tig0021765:60517-60536 | None:intergenic | 15.0% |
!! | ATATTACACACATTATAAAT+TGG | - | tig0021765:60596-60615 | Msa1393900:intron | 15.0% |
!! | TTTAGGTAAGTATAATAATT+TGG | - | tig0021765:60993-61012 | Msa1393900:intron | 15.0% |
!! | ATTGTTAGATAGAAAAATAA+TGG | - | tig0021765:61179-61198 | Msa1393900:CDS | 15.0% |
!!! | AATGCAAACTTTTTAATTTA+CGG | + | tig0021765:61554-61573 | None:intergenic | 15.0% |
!! | AAAATTCAAAACTAAATTAG+TGG | + | tig0021765:61841-61860 | None:intergenic | 15.0% |
!!! | TATTACATTTATCTTTTTCA+CGG | - | tig0021765:62482-62501 | Msa1393900:intron | 15.0% |
!! | TGTAATATTTATATATTTGC+AGG | - | tig0021765:62734-62753 | Msa1393900:intron | 15.0% |
!! | GTAATATTTATATATTTGCA+GGG | - | tig0021765:62735-62754 | Msa1393900:intron | 15.0% |
!! | TACCATAAAAAAAAGTAAGT+TGG | - | tig0021765:59924-59943 | Msa1393900:three_prime_UTR | 20.0% |
!!! | TACCAACTTACTTTTTTTTA+TGG | + | tig0021765:59929-59948 | None:intergenic | 20.0% |
!! | AATAAGCACATTATTATTCT+TGG | + | tig0021765:60034-60053 | None:intergenic | 20.0% |
!! | AAAGAAAAAAAAAAGTTGCA+AGG | + | tig0021765:60463-60482 | None:intergenic | 20.0% |
!!! | TTCATTTTAGTCATTATGTT+TGG | + | tig0021765:60577-60596 | None:intergenic | 20.0% |
!! | AAGTATAATAATTTGGACAA+AGG | - | tig0021765:61000-61019 | Msa1393900:intron | 20.0% |
!! | AATAATCAATTAATTAGCCA+TGG | - | tig0021765:61285-61304 | Msa1393900:intron | 20.0% |
!! | TATGCAAATTATAGATATGA+TGG | + | tig0021765:61314-61333 | None:intergenic | 20.0% |
!!! | TGCATTTTATTCAAAAACTT+TGG | - | tig0021765:62004-62023 | Msa1393900:intron | 20.0% |
!!! | TCAAATTCTAAAAGAATTGT+TGG | + | tig0021765:62050-62069 | None:intergenic | 20.0% |
!!! | ATTCTTTTAGAATTTGAATC+TGG | - | tig0021765:62053-62072 | Msa1393900:intron | 20.0% |
!!! | GCTTTCATTTTGTTTATTTT+TGG | - | tig0021765:62101-62120 | Msa1393900:intron | 20.0% |
!!! | TGAGAATTCTTTTATGTTAA+TGG | + | tig0021765:62153-62172 | None:intergenic | 20.0% |
!! | ATTGCAAATTATTCTAGATA+CGG | - | tig0021765:62445-62464 | Msa1393900:intron | 20.0% |
!!! | ATTACATTTATCTTTTTCAC+GGG | - | tig0021765:62483-62502 | Msa1393900:intron | 20.0% |
!! | AATCATAATACAAACTCTAA+AGG | + | tig0021765:62514-62533 | None:intergenic | 20.0% |
!! | ATTACAAATTTAACAACTCT+TGG | + | tig0021765:62720-62739 | None:intergenic | 20.0% |
!! | ATTTGTACATTAATACATTC+AGG | - | tig0021765:63195-63214 | Msa1393900:five_prime_UTR | 20.0% |
! | ATATATGAATATGATGCTCA+AGG | + | tig0021765:59870-59889 | None:intergenic | 25.0% |
! | ATCTCATACTTTCAAACTAA+GGG | - | tig0021765:59993-60012 | Msa1393900:three_prime_UTR | 25.0% |
!! | TTTTAGTCATTATGTTTGGA+AGG | + | tig0021765:60573-60592 | None:intergenic | 25.0% |
!! | CAACATGAACAAATTTTACA+AGG | - | tig0021765:60626-60645 | Msa1393900:intron | 25.0% |
! | ACCAATACTTTCAATTTGAT+TGG | - | tig0021765:60666-60685 | Msa1393900:intron | 25.0% |
! | CCAATACTTTCAATTTGATT+GGG | - | tig0021765:60667-60686 | Msa1393900:intron | 25.0% |
!!! | CAAGTTTTATTCCATTAAGT+AGG | + | tig0021765:60906-60925 | None:intergenic | 25.0% |
! | CTACTTAATGGAATAAAACT+TGG | - | tig0021765:60904-60923 | Msa1393900:CDS | 25.0% |
! | CATAAATAAGGACATATGAT+AGG | - | tig0021765:60968-60987 | Msa1393900:intron | 25.0% |
! | TTGATGTTTCTTTGTATGTT+TGG | + | tig0021765:61160-61179 | None:intergenic | 25.0% |
!! | AAAATCTAAATGGATGGATT+CGG | + | tig0021765:61365-61384 | None:intergenic | 25.0% |
! | TAAGAAAATCAATGATGAGA+CGG | + | tig0021765:61516-61535 | None:intergenic | 25.0% |
! | TCCAAATATGCATTTAAGAA+TGG | + | tig0021765:61644-61663 | None:intergenic | 25.0% |
! | AAATGCATATTTGGATTCAT+TGG | - | tig0021765:61649-61668 | Msa1393900:CDS | 25.0% |
! | AATGCATATTTGGATTCATT+GGG | - | tig0021765:61650-61669 | Msa1393900:CDS | 25.0% |
! | TTACAACCTTTCCTAAAATT+TGG | + | tig0021765:61680-61699 | None:intergenic | 25.0% |
!! | TTCTAAAAGAATTGTTGGAA+TGG | + | tig0021765:62045-62064 | None:intergenic | 25.0% |
!! | AGAATTTGAATCTGGAATTA+AGG | - | tig0021765:62061-62080 | Msa1393900:intron | 25.0% |
!! | ATCTAGAATAATTTGCAATG+AGG | + | tig0021765:62444-62463 | None:intergenic | 25.0% |
! | TACATATACATATACATCGT+CGG | - | tig0021765:62537-62556 | Msa1393900:intron | 25.0% |
! | AATTCTTTAACATCATCACA+CGG | + | tig0021765:63178-63197 | None:intergenic | 25.0% |
CAACTATCAACCAAATTAAG+TGG | + | tig0021765:59960-59979 | None:intergenic | 30.0% | |
!! | CACTTAATTTGGTTGATAGT+TGG | - | tig0021765:59958-59977 | Msa1393900:three_prime_UTR | 30.0% |
! | TTTGAAAGTATGAGATGAGT+TGG | + | tig0021765:59989-60008 | None:intergenic | 30.0% |
CATCTCATACTTTCAAACTA+AGG | - | tig0021765:59992-60011 | Msa1393900:three_prime_UTR | 30.0% | |
!!! | TGTGTTATTTTGCACATGTT+TGG | - | tig0021765:60065-60084 | Msa1393900:three_prime_UTR | 30.0% |
CAACTTAGGTGATTCAAATT+CGG | - | tig0021765:60128-60147 | Msa1393900:CDS | 30.0% | |
AACTACTTCAAAACTCCAAA+TGG | - | tig0021765:60207-60226 | Msa1393900:CDS | 30.0% | |
ACAAGGACTAAAAAACATCA+AGG | - | tig0021765:60643-60662 | Msa1393900:intron | 30.0% | |
! | CCCAATCAAATTGAAAGTAT+TGG | + | tig0021765:60670-60689 | None:intergenic | 30.0% |
TTCAACAACATTGCACTATT+TGG | + | tig0021765:61085-61104 | None:intergenic | 30.0% | |
TGTTTCTTTGTATGTTTGGT+GGG | + | tig0021765:61156-61175 | None:intergenic | 30.0% | |
ATGTTTCTTTGTATGTTTGG+TGG | + | tig0021765:61157-61176 | None:intergenic | 30.0% | |
GCAAATTATAGATATGATGG+TGG | + | tig0021765:61311-61330 | None:intergenic | 30.0% | |
AAACTGCTGGAAAATCTAAA+TGG | + | tig0021765:61375-61394 | None:intergenic | 30.0% | |
!!! | TTTCCAGCAGTTTTTAACTT+TGG | - | tig0021765:61382-61401 | Msa1393900:CDS | 30.0% |
! | TTTTCCTAATGATGTTGTCT+TGG | - | tig0021765:61588-61607 | Msa1393900:intron | 30.0% |
GCCATTCTTAAATGCATATT+TGG | - | tig0021765:61640-61659 | Msa1393900:CDS | 30.0% | |
TTCATTCTTTCAAGCATTTC+AGG | - | tig0021765:61894-61913 | Msa1393900:intron | 30.0% | |
TTCTCAAAAATATCTTCGCT+CGG | + | tig0021765:61942-61961 | None:intergenic | 30.0% | |
!! | AGCGAAGATATTTTTGAGAA+AGG | - | tig0021765:61942-61961 | Msa1393900:intron | 30.0% |
GGATTATACATGTTTGACAT+TGG | - | tig0021765:61963-61982 | Msa1393900:intron | 30.0% | |
TAAAAGAATTGTTGGAATGG+AGG | + | tig0021765:62042-62061 | None:intergenic | 30.0% | |
! | TTTGAATCTGGAATTAAGGT+TGG | - | tig0021765:62065-62084 | Msa1393900:intron | 30.0% |
TTGATAGAGACTATATGATG+AGG | - | tig0021765:62189-62208 | Msa1393900:intron | 30.0% | |
TGATAGAGACTATATGATGA+GGG | - | tig0021765:62190-62209 | Msa1393900:intron | 30.0% | |
!! | TATTTCTGGATACACAATAC+AGG | - | tig0021765:62220-62239 | Msa1393900:intron | 30.0% |
ACATATGTGACATTTGAATC+TGG | + | tig0021765:62397-62416 | None:intergenic | 30.0% | |
CTTTATGTGCTTGTATTGTA+TGG | - | tig0021765:63066-63085 | Msa1393900:CDS | 30.0% | |
TCACTAATGTCAAATTGACA+TGG | - | tig0021765:63143-63162 | Msa1393900:five_prime_UTR | 30.0% | |
TGTACATTAATACATTCAGG+AGG | - | tig0021765:63198-63217 | Msa1393900:five_prime_UTR | 30.0% | |
CTATCAACCAAATTAAGTGG+CGG | + | tig0021765:59957-59976 | None:intergenic | 35.0% | |
! | ATTTTGCACATGTTTGGAAG+TGG | - | tig0021765:60071-60090 | Msa1393900:three_prime_UTR | 35.0% |
! | TTTCCAGCAGTTTTCAACTT+AGG | - | tig0021765:60114-60133 | Msa1393900:exon | 35.0% |
! | TTGAAGTAGTTCTGTCCATA+AGG | + | tig0021765:60198-60217 | None:intergenic | 35.0% |
ACTTCAAAACTCCAAATGGA+AGG | - | tig0021765:60211-60230 | Msa1393900:CDS | 35.0% | |
CTTCAAAACTCCAAATGGAA+GGG | - | tig0021765:60212-60231 | Msa1393900:CDS | 35.0% | |
TTAGGAAGTCAACAATGAGA+CGG | + | tig0021765:60248-60267 | None:intergenic | 35.0% | |
GGAACTAAAAGATACACAGA+GGG | + | tig0021765:60496-60515 | None:intergenic | 35.0% | |
AGGAACTAAAAGATACACAG+AGG | + | tig0021765:60497-60516 | None:intergenic | 35.0% | |
ATGTAGCTGATCCTACTTAA+TGG | - | tig0021765:60892-60911 | Msa1393900:CDS | 35.0% | |
AGGACATATGATAGGAGTTT+AGG | - | tig0021765:60976-60995 | Msa1393900:intron | 35.0% | |
ACAACATTGCACTATTTGGA+TGG | + | tig0021765:61081-61100 | None:intergenic | 35.0% | |
TTTCAAAAACAAGCAAACCC+TGG | - | tig0021765:61233-61252 | Msa1393900:intron | 35.0% | |
!! | TATGTGTTTTAAGCCTTCCA+GGG | + | tig0021765:61253-61272 | None:intergenic | 35.0% |
GGCACAAGGTAATAAGAATA+TGG | + | tig0021765:61344-61363 | None:intergenic | 35.0% | |
TGCTGGAAAATCTAAATGGA+TGG | + | tig0021765:61371-61390 | None:intergenic | 35.0% | |
TCACCAAAGTTAAAAACTGC+TGG | + | tig0021765:61388-61407 | None:intergenic | 35.0% | |
TGAAAGTAAGTGTGTCCATT+TGG | + | tig0021765:61466-61485 | None:intergenic | 35.0% | |
ACTTACTTTCATCTACCATC+AGG | - | tig0021765:61475-61494 | Msa1393900:CDS | 35.0% | |
CTTACTTTCATCTACCATCA+GGG | - | tig0021765:61476-61495 | Msa1393900:CDS | 35.0% | |
ACAACCAAGACAACATCATT+AGG | + | tig0021765:61595-61614 | None:intergenic | 35.0% | |
! | CATTGGGTTTGCCAAATTTT+AGG | - | tig0021765:61666-61685 | Msa1393900:CDS | 35.0% |
!! | GGTTTGCCAAATTTTAGGAA+AGG | - | tig0021765:61671-61690 | Msa1393900:CDS | 35.0% |
TCTCAAAAATATCTTCGCTC+GGG | + | tig0021765:61941-61960 | None:intergenic | 35.0% | |
GATAGAGACTATATGATGAG+GGG | - | tig0021765:62191-62210 | Msa1393900:intron | 35.0% | |
ATAGAGACTATATGATGAGG+GGG | - | tig0021765:62192-62211 | Msa1393900:intron | 35.0% | |
! | TGATGGATCAGTTCCAAATT+TGG | + | tig0021765:62275-62294 | None:intergenic | 35.0% |
ATGAACTAGGATGTGTTAGT+GGG | - | tig0021765:62302-62321 | Msa1393900:intron | 35.0% | |
AGCATGAAGTTGTAGGTTAA+AGG | + | tig0021765:62347-62366 | None:intergenic | 35.0% | |
TCTAGATACGGTTAGTAACT+TGG | - | tig0021765:62457-62476 | Msa1393900:intron | 35.0% | |
AGGGTTTGAACAACCTATTA+TGG | - | tig0021765:62754-62773 | Msa1393900:intron | 35.0% | |
TATCCACAACATGCCATAAT+AGG | + | tig0021765:62770-62789 | None:intergenic | 35.0% | |
ATTATGGCATGTTGTGGATA+TGG | - | tig0021765:62770-62789 | Msa1393900:intron | 35.0% | |
ACTCTACTGTCATAGTTCAA+TGG | + | tig0021765:62803-62822 | None:intergenic | 35.0% | |
TGTAATTGTCGTTCCATTGA+AGG | + | tig0021765:62846-62865 | None:intergenic | 35.0% | |
!! | ACAGTTCTGAGTATATCAAC+TGG | - | tig0021765:62882-62901 | Msa1393900:intron | 35.0% |
!! | CAGTTCTGAGTATATCAACT+GGG | - | tig0021765:62883-62902 | Msa1393900:intron | 35.0% |
! | AATGGCATTTTGTCTGAGAA+AGG | + | tig0021765:62983-63002 | None:intergenic | 35.0% |
! | TTTAGAACTTGAGCTTGAGA+AGG | + | tig0021765:63006-63025 | None:intergenic | 35.0% |
TGGTTCACATGTCTATGATA+AGG | - | tig0021765:63226-63245 | Msa1393900:five_prime_UTR | 35.0% | |
TACGTATCCGCCACTTAATT+TGG | - | tig0021765:59947-59966 | Msa1393900:three_prime_UTR | 40.0% | |
TACTTTCAAACTAAGGGCCA+TGG | - | tig0021765:59999-60018 | Msa1393900:three_prime_UTR | 40.0% | |
! | TCACCTAAGTTGAAAACTGC+TGG | + | tig0021765:60120-60139 | None:intergenic | 40.0% |
ACACAGGTGAACTTACAGTT+GGG | - | tig0021765:60151-60170 | Msa1393900:CDS | 40.0% | |
! | TTTCAGCTTGTTCCACCTTA+TGG | - | tig0021765:60180-60199 | Msa1393900:CDS | 40.0% |
! | AAGTAGTTCTGTCCATAAGG+TGG | + | tig0021765:60195-60214 | None:intergenic | 40.0% |
ATCTTGCTTCTCTCTAGATC+AGG | - | tig0021765:61024-61043 | Msa1393900:intron | 40.0% | |
TAAAAGTGAGTCATGCGACA+AGG | - | tig0021765:61050-61069 | Msa1393900:intron | 40.0% | |
AAAAACAAGCAAACCCTGGA+AGG | - | tig0021765:61237-61256 | Msa1393900:intron | 40.0% | |
!! | GTATGTGTTTTAAGCCTTCC+AGG | + | tig0021765:61254-61273 | None:intergenic | 40.0% |
!! | TATAGATATGATGGTGGCCA+TGG | + | tig0021765:61305-61324 | None:intergenic | 40.0% |
TTCAAAACCAGCGGTAACAA+GGG | + | tig0021765:61431-61450 | None:intergenic | 40.0% | |
TTTCAAAACCAGCGGTAACA+AGG | + | tig0021765:61432-61451 | None:intergenic | 40.0% | |
GTAAAGGCTTTCAAAACCAG+CGG | + | tig0021765:61440-61459 | None:intergenic | 40.0% | |
AGTAAGTGTGTCCATTTGGT+GGG | + | tig0021765:61462-61481 | None:intergenic | 40.0% | |
AAGTAAGTGTGTCCATTTGG+TGG | + | tig0021765:61463-61482 | None:intergenic | 40.0% | |
CTTGAATTGCTTGCAGGAAA+AGG | - | tig0021765:61806-61825 | Msa1393900:intron | 40.0% | |
ATACACAATACAGGTCCTCT+GGG | - | tig0021765:62229-62248 | Msa1393900:intron | 40.0% | |
GCTCAGAATGTAGCCAAATT+TGG | - | tig0021765:62259-62278 | Msa1393900:intron | 40.0% | |
! | CCTAGTTCATCAAGCTTTGA+TGG | + | tig0021765:62292-62311 | None:intergenic | 40.0% |
CCATCAAAGCTTGATGAACT+AGG | - | tig0021765:62289-62308 | Msa1393900:intron | 40.0% | |
GATGAACTAGGATGTGTTAG+TGG | - | tig0021765:62301-62320 | Msa1393900:intron | 40.0% | |
!! | GGTTAAAGGTTTTAGCAGCT+TGG | + | tig0021765:62333-62352 | None:intergenic | 40.0% |
TACACAGAGCATGAAGTTGT+AGG | + | tig0021765:62354-62373 | None:intergenic | 40.0% | |
TGCTCTGTGTAGTAAATTGC+AGG | - | tig0021765:62363-62382 | Msa1393900:intron | 40.0% | |
GCTCTGTGTAGTAAATTGCA+GGG | - | tig0021765:62364-62383 | Msa1393900:intron | 40.0% | |
CAACCTATTATGGCATGTTG+TGG | - | tig0021765:62764-62783 | Msa1393900:intron | 40.0% | |
CTACTGTCATAGTTCAATGG+TGG | + | tig0021765:62800-62819 | None:intergenic | 40.0% | |
TATGACAGTAGAGTGACTTG+TGG | - | tig0021765:62809-62828 | Msa1393900:intron | 40.0% | |
! | ATGACAGTAGAGTGACTTGT+GGG | - | tig0021765:62810-62829 | Msa1393900:intron | 40.0% |
GGAACGACAATTACAGCAAA+AGG | - | tig0021765:62851-62870 | Msa1393900:intron | 40.0% | |
TCTGAGTATATCAACTGGGA+TGG | - | tig0021765:62887-62906 | Msa1393900:CDS | 40.0% | |
! | GCATTTTGTCTGAGAAAGGA+GGG | + | tig0021765:62979-62998 | None:intergenic | 40.0% |
AACTTGAGCTTGAGAAGGAA+TGG | + | tig0021765:63001-63020 | None:intergenic | 40.0% | |
AATACATTCAGGAGGCTTCA+TGG | - | tig0021765:63206-63225 | Msa1393900:five_prime_UTR | 40.0% | |
TTTCAAACTAAGGGCCATGG+CGG | - | tig0021765:60002-60021 | Msa1393900:three_prime_UTR | 45.0% | |
GGTGATTCAAATTCGGACAC+AGG | - | tig0021765:60135-60154 | Msa1393900:CDS | 45.0% | |
GACACAGGTGAACTTACAGT+TGG | - | tig0021765:60150-60169 | Msa1393900:CDS | 45.0% | |
AGGTGAACTTACAGTTGGGT+TGG | - | tig0021765:60155-60174 | Msa1393900:CDS | 45.0% | |
GGTGAACTTACAGTTGGGTT+GGG | - | tig0021765:60156-60175 | Msa1393900:CDS | 45.0% | |
! | AAATGGATGGATTCGGCACA+AGG | + | tig0021765:61358-61377 | None:intergenic | 45.0% |
GGTGATTCAAATTCCGACAC+CGG | - | tig0021765:61403-61422 | Msa1393900:CDS | 45.0% | |
GAAAGCCTTTACCCACCAAA+TGG | - | tig0021765:61448-61467 | Msa1393900:CDS | 45.0% | |
! | TGTGTCCATTTGGTGGGTAA+AGG | + | tig0021765:61456-61475 | None:intergenic | 45.0% |
!! | GTCTTGGTTGTTGTTTGCAG+TGG | - | tig0021765:61604-61623 | Msa1393900:intron | 45.0% |
GTTGTTTGCAGTGGATGCAT+TGG | - | tig0021765:61613-61632 | Msa1393900:intron | 45.0% | |
CCTGAATCCCAAAGGAGAAA+GGG | + | tig0021765:61754-61773 | None:intergenic | 45.0% | |
ACCTGAATCCCAAAGGAGAA+AGG | + | tig0021765:61755-61774 | None:intergenic | 45.0% | |
ATTGGCCAGAATGATCTTGC+TGG | - | tig0021765:61981-62000 | Msa1393900:intron | 45.0% | |
ATGCACCAGCAAGATCATTC+TGG | + | tig0021765:61989-62008 | None:intergenic | 45.0% | |
TTGGAATGGAGGCAAGTACT+TGG | + | tig0021765:62031-62050 | None:intergenic | 45.0% | |
ATGAGGGGGCTAGATATTTC+TGG | - | tig0021765:62206-62225 | Msa1393900:intron | 45.0% | |
GATACACAATACAGGTCCTC+TGG | - | tig0021765:62228-62247 | Msa1393900:intron | 45.0% | |
ATGGCATGTTGTGGATATGG+AGG | - | tig0021765:62773-62792 | Msa1393900:intron | 45.0% | |
GGGAACACAAAGACCTTCAA+TGG | - | tig0021765:62830-62849 | Msa1393900:intron | 45.0% | |
GTTGCATCACAGATTCTCAC+TGG | - | tig0021765:62941-62960 | Msa1393900:CDS | 45.0% | |
! | GGCATTTTGTCTGAGAAAGG+AGG | + | tig0021765:62980-62999 | None:intergenic | 45.0% |
!! | ATAAAATAAAAATTATACTT+AGG | + | tig0021765:60266-60285 | None:intergenic | 5.0% |
!! | TAATATTAATAATCTATAAA+AGG | + | tig0021765:60341-60360 | None:intergenic | 5.0% |
!! | GTTAATAATTATAAATATAA+AGG | - | tig0021765:60368-60387 | Msa1393900:CDS | 5.0% |
!!! | TAACTTTTTTTTTTAAATAA+AGG | - | tig0021765:60397-60416 | Msa1393900:intron | 5.0% |
!! | TAATTTATGATATAATATTA+TGG | - | tig0021765:60856-60875 | Msa1393900:CDS | 5.0% |
TTCAAACTAAGGGCCATGGC+GGG | - | tig0021765:60003-60022 | Msa1393900:three_prime_UTR | 50.0% | |
ATTCTTGGAATCACCCGCCA+TGG | + | tig0021765:60019-60038 | None:intergenic | 50.0% | |
CCATCACATGCCCTTCCATT+TGG | + | tig0021765:60225-60244 | None:intergenic | 50.0% | |
! | CCAAATGGAAGGGCATGTGA+TGG | - | tig0021765:60222-60241 | Msa1393900:CDS | 50.0% |
! | CCATCAGAGTATCTCCCTGA+TGG | + | tig0021765:61493-61512 | None:intergenic | 50.0% |
CCATCAGGGAGATACTCTGA+TGG | - | tig0021765:61490-61509 | Msa1393900:CDS | 50.0% | |
GGTTGTAACTTTGCAGCAGC+TGG | - | tig0021765:61692-61711 | Msa1393900:CDS | 50.0% | |
!! | CCCTTTCTCCTTTGGGATTC+AGG | - | tig0021765:61751-61770 | Msa1393900:CDS | 50.0% |
CTGAGACACCTGAATCCCAA+AGG | + | tig0021765:61762-61781 | None:intergenic | 50.0% | |
TCCCTCTGCCCTTTCTCCTT+TGG | - | tig0021765:61743-61762 | Msa1393900:CDS | 55.0% | |
CCCAAAGGAGAAAGGGCAGA+GGG | + | tig0021765:61747-61766 | None:intergenic | 55.0% | |
CCCTCTGCCCTTTCTCCTTT+GGG | - | tig0021765:61744-61763 | Msa1393900:CDS | 55.0% | |
TCCCAAAGGAGAAAGGGCAG+AGG | + | tig0021765:61748-61767 | None:intergenic | 55.0% | |
!! | GAGCGCGAGCTTTGAACTTG+AGG | + | tig0021765:61787-61806 | None:intergenic | 55.0% |
CGCGCTCTTGAATTGCTTGC+AGG | - | tig0021765:61800-61819 | Msa1393900:intron | 55.0% | |
!! | TACAGGTCCTCTGGGATGCT+TGG | - | tig0021765:62237-62256 | Msa1393900:intron | 55.0% |
TTCTGAGCCAAGCATCCCAG+AGG | + | tig0021765:62247-62266 | None:intergenic | 55.0% | |
!! | GGTAACAAGGGTGCCGGTGT+CGG | + | tig0021765:61419-61438 | None:intergenic | 60.0% |
! | ACCAGCGGTAACAAGGGTGC+CGG | + | tig0021765:61425-61444 | None:intergenic | 60.0% |
GGGATGATGCAGTGGCTGGA+AGG | + | tig0021765:61727-61746 | None:intergenic | 60.0% | |
CAGAGGGATGATGCAGTGGC+TGG | + | tig0021765:61731-61750 | None:intergenic | 60.0% | |
AGGGCAGAGGGATGATGCAG+TGG | + | tig0021765:61735-61754 | None:intergenic | 60.0% | |
ACCGGCACCCTTGTTACCGC+TGG | - | tig0021765:61421-61440 | Msa1393900:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0021765 | gene | 59847 | 63304 | 59847 | ID=Msa1393900;Name=Msa1393900 |
tig0021765 | mRNA | 59847 | 63304 | 59847 | ID=Msa1393900-mRNA-1;Parent=Msa1393900;Name=Msa1393900-mRNA-1;_AED=0.28;_eAED=0.28;_QI=171|0.8|0.83|1|1|1|6|280|438 |
tig0021765 | exon | 59847 | 60395 | 59847 | ID=Msa1393900-mRNA-1:exon:14125;Parent=Msa1393900-mRNA-1 |
tig0021765 | exon | 60685 | 60955 | 60685 | ID=Msa1393900-mRNA-1:exon:14124;Parent=Msa1393900-mRNA-1 |
tig0021765 | exon | 61069 | 61235 | 61069 | ID=Msa1393900-mRNA-1:exon:14123;Parent=Msa1393900-mRNA-1 |
tig0021765 | exon | 61324 | 61527 | 61324 | ID=Msa1393900-mRNA-1:exon:14122;Parent=Msa1393900-mRNA-1 |
tig0021765 | exon | 61616 | 61771 | 61616 | ID=Msa1393900-mRNA-1:exon:14121;Parent=Msa1393900-mRNA-1 |
tig0021765 | exon | 62884 | 63304 | 62884 | ID=Msa1393900-mRNA-1:exon:14120;Parent=Msa1393900-mRNA-1 |
tig0021765 | five_prime_UTR | 63134 | 63304 | 63134 | ID=Msa1393900-mRNA-1:five_prime_utr;Parent=Msa1393900-mRNA-1 |
tig0021765 | CDS | 62884 | 63133 | 62884 | ID=Msa1393900-mRNA-1:cds;Parent=Msa1393900-mRNA-1 |
tig0021765 | CDS | 61616 | 61771 | 61616 | ID=Msa1393900-mRNA-1:cds;Parent=Msa1393900-mRNA-1 |
tig0021765 | CDS | 61324 | 61527 | 61324 | ID=Msa1393900-mRNA-1:cds;Parent=Msa1393900-mRNA-1 |
tig0021765 | CDS | 61069 | 61235 | 61069 | ID=Msa1393900-mRNA-1:cds;Parent=Msa1393900-mRNA-1 |
tig0021765 | CDS | 60685 | 60955 | 60685 | ID=Msa1393900-mRNA-1:cds;Parent=Msa1393900-mRNA-1 |
tig0021765 | CDS | 60127 | 60395 | 60127 | ID=Msa1393900-mRNA-1:cds;Parent=Msa1393900-mRNA-1 |
tig0021765 | three_prime_UTR | 59847 | 60126 | 59847 | ID=Msa1393900-mRNA-1:three_prime_utr;Parent=Msa1393900-mRNA-1 |
Gene Sequence |
Protein sequence |