AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0314170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0314170 MtrunA17_Chr2g0284211 99.285 979 5 1 1 977 1 979 0.0 2017
Msa0314170 MtrunA17_Chr8g0379241 81.964 998 152 8 1 977 1 991 0.0 1652
Msa0314170 MtrunA17_Chr2g0296991 65.098 1020 293 14 3 970 31 1039 0.0 1325
Msa0314170 MtrunA17_Chr4g0073711 63.221 1006 303 8 9 963 37 1026 0.0 1310
Msa0314170 MtrunA17_Chr3g0088821 66.060 934 277 12 75 977 154 1078 0.0 1262
Msa0314170 MtrunA17_Chr3g0137951 66.702 931 282 13 70 977 162 1087 0.0 1258
Msa0314170 MtrunA17_Chr8g0383701 66.936 865 273 5 110 962 220 1083 0.0 1244
Msa0314170 MtrunA17_Chr1g0201731 67.396 868 261 6 110 964 228 1086 0.0 1236
Msa0314170 MtrunA17_Chr8g0352231 67.749 893 264 11 101 977 194 1078 0.0 1231
Msa0314170 MtrunA17_Chr1g0183381 66.994 815 250 5 158 970 102 899 0.0 1169
Msa0314170 MtrunA17_Chr3g0078671 55.294 1020 396 10 9 977 39 1049 0.0 1158
Msa0314170 MtrunA17_Chr7g0267731 64.719 873 280 7 110 963 111 974 0.0 1149
Msa0314170 MtrunA17_Chr8g0364641 54.462 975 404 14 9 974 37 980 0.0 1124
Msa0314170 MtrunA17_Chr4g0039801 45.437 1030 446 21 12 958 132 1128 0.0 858
Msa0314170 MtrunA17_Chr5g0410641 44.104 1043 446 18 10 958 108 1107 0.0 848
Msa0314170 MtrunA17_Chr7g0269741 48.594 889 359 16 151 958 285 1156 0.0 817
Msa0314170 MtrunA17_Chr1g0165411 43.457 1024 455 21 7 958 118 1089 0.0 808
Msa0314170 MtrunA17_Chr1g0165421 43.528 1043 466 20 7 967 125 1126 0.0 803
Msa0314170 MtrunA17_Chr2g0297351 46.871 879 359 16 162 958 158 1010 0.0 782
Msa0314170 MtrunA17_Chr7g0274751 42.353 850 307 17 162 966 95 806 0.0 607
Msa0314170 MtrunA17_Chr2g0322361 33.771 761 413 15 208 949 52 740 7.90e-130 410
Msa0314170 MtrunA17_Chr3g0102531 34.588 691 359 14 178 859 21 627 1.05e-128 406
Msa0314170 MtrunA17_Chr2g0322371 33.595 765 410 17 208 954 47 731 4.90e-127 402
Msa0314170 MtrunA17_Chr3g0102541 34.421 674 350 13 195 859 38 628 3.48e-125 397
Msa0314170 MtrunA17_Chr4g0046401 32.579 795 442 17 170 949 15 730 8.93e-125 396
Msa0314170 MtrunA17_Chr2g0322351 34.383 762 422 18 195 949 37 727 9.09e-124 394
Msa0314170 MtrunA17_Chr1g0186381 31.158 812 449 17 155 944 2 725 3.40e-120 384
Msa0314170 MtrunA17_Chr4g0025201 32.710 749 415 17 195 928 37 711 1.59e-118 380
Msa0314170 MtrunA17_Chr3g0095791 28.794 771 447 14 172 933 12 689 9.76e-107 347
Msa0314170 MtrunA17_Chr2g0307191 29.188 764 442 13 179 934 19 691 3.48e-104 340
Msa0314170 MtrunA17_Chr2g0298581 29.528 762 440 14 179 933 19 690 4.00e-103 337
Msa0314170 MtrunA17_Chr3g0077511 27.451 765 456 12 179 934 19 693 2.15e-95 317
Msa0314170 MtrunA17_Chr3g0102551 39.552 402 208 10 166 547 7 393 2.26e-88 299
Msa0314170 MtrunA17_Chr3g0102551 30.719 306 195 7 653 946 429 729 9.19e-35 142
Msa0314170 MtrunA17_Chr2g0322341 42.006 319 171 6 195 513 39 343 9.90e-78 258
Msa0314170 MtrunA17_Chr2g0322331 30.163 368 241 7 594 949 8 371 6.32e-48 175
Msa0314170 MtrunA17_Chr3g0126641 43.318 217 92 5 489 686 6 210 1.31e-45 163
Msa0314170 MtrunA17_Chr0c03g0490021 63.934 122 43 1 806 926 1 122 9.28e-44 155
Msa0314170 MtrunA17_Chr2g0307241 33.163 196 111 3 179 374 19 194 5.10e-29 115
Msa0314170 MtrunA17_Chr7g0252781 60.000 85 33 1 893 977 6 89 3.21e-27 106
Msa0314170 MtrunA17_Chr8g0355061 77.778 54 12 0 806 859 1 54 2.48e-24 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0314170 AT4G18780.1 82.234 985 167 3 1 977 1 985 0.0 1675
Msa0314170 AT5G44030.1 63.163 1037 304 13 9 977 23 1049 0.0 1321
Msa0314170 AT5G17420.1 63.101 1019 297 11 7 974 35 1025 0.0 1311
Msa0314170 AT5G44030.2 61.568 1059 314 10 9 977 23 1078 0.0 1311
Msa0314170 AT5G05170.1 61.296 1049 319 14 9 974 20 1064 0.0 1290
Msa0314170 AT2G25540.1 61.569 1020 319 15 9 961 33 1046 0.0 1287
Msa0314170 AT4G32410.1 61.628 1032 311 13 9 960 39 1065 0.0 1285
Msa0314170 AT5G64740.1 57.613 1064 337 14 9 977 39 1083 0.0 1252
Msa0314170 AT2G21770.1 66.402 881 277 9 110 977 212 1086 0.0 1235
Msa0314170 AT5G09870.1 65.006 883 279 9 110 977 201 1068 0.0 1225
Msa0314170 AT4G39350.1 66.282 866 276 5 110 962 208 1070 0.0 1206
Msa0314170 AT5G44030.3 72.021 772 174 6 245 977 2 770 0.0 1158
Msa0314170 AT5G16910.1 44.831 1035 447 21 12 958 133 1131 0.0 836
Msa0314170 AT3G03050.1 44.306 1045 436 21 12 958 135 1131 0.0 835
Msa0314170 AT1G02730.1 44.553 1019 460 19 30 964 177 1174 0.0 813
Msa0314170 AT4G38190.1 43.520 1034 438 22 11 958 119 1092 0.0 806
Msa0314170 AT2G33100.2 47.026 891 368 16 162 969 166 1035 0.0 795
Msa0314170 AT2G33100.1 47.026 891 368 16 162 969 166 1035 0.0 795
Msa0314170 AT1G32180.1 47.586 870 369 16 164 956 107 966 0.0 783
Msa0314170 AT1G32180.2 47.586 870 369 16 164 956 107 966 0.0 783
Msa0314170 AT2G32530.1 33.043 805 416 24 183 949 24 743 1.55e-118 380
Msa0314170 AT2G32610.1 32.120 797 437 23 186 949 27 752 3.62e-118 380
Msa0314170 AT2G32540.1 32.010 781 421 18 207 954 50 753 4.90e-116 374
Msa0314170 AT2G32620.1 32.979 752 405 17 207 930 50 730 1.92e-115 372
Msa0314170 AT4G15320.3 32.950 783 415 22 179 927 23 729 8.43e-114 368
Msa0314170 AT4G15320.5 32.950 783 415 22 179 927 23 729 1.02e-113 368
Msa0314170 AT4G15320.4 32.456 798 414 23 179 927 23 744 1.30e-109 357
Msa0314170 AT2G32620.3 36.034 580 302 12 207 781 50 565 8.67e-109 350
Msa0314170 AT4G15290.1 32.357 751 409 20 206 928 49 728 4.77e-107 350
Msa0314170 AT2G32620.4 33.143 700 371 17 261 930 2 634 6.67e-104 339
Msa0314170 AT4G15320.2 32.297 740 359 20 179 863 23 675 4.72e-102 337
Msa0314170 AT2G32620.2 35.379 554 287 11 207 755 50 537 1.74e-99 323
Msa0314170 AT4G15320.1 30.612 784 357 22 179 863 23 718 1.03e-93 316
Msa0314170 AT1G55850.1 40.547 402 219 8 150 547 6 391 1.08e-84 289
Msa0314170 AT1G55850.1 31.098 328 197 9 634 946 406 719 3.95e-34 141
Msa0314170 AT4G24010.1 39.594 394 204 11 177 558 25 396 1.64e-78 272
Msa0314170 AT4G24010.1 34.831 267 166 2 647 907 419 683 5.30e-40 159
Msa0314170 AT4G24000.1 37.330 442 235 15 152 581 1 412 2.91e-76 265
Msa0314170 AT4G24000.1 31.013 316 204 5 643 950 405 714 1.67e-40 160
Msa0314170 AT4G23990.1 37.949 390 216 8 177 558 44 415 4.57e-74 259
Msa0314170 AT4G23990.1 32.258 310 196 4 628 930 419 721 1.50e-41 164
Msa0314170 AT4G23990.2 32.258 310 196 4 628 930 205 507 1.20e-41 161
Msa0314170 AT4G23990.2 42.857 203 105 5 363 558 3 201 3.31e-38 151
Msa0314170 AT4G24000.2 42.544 228 112 8 363 581 3 220 1.78e-41 160
Msa0314170 AT4G24000.2 32.740 281 178 3 643 917 213 488 7.18e-41 159

Find 243 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCGACAAGCGCTTTA+TGG 0.152250 2_4:-9810642 Msa0314170:CDS
TCCATTCCTTAAGGGTCTTA+TGG 0.193420 2_4:-9809047 Msa0314170:CDS
GTTAAGGGTCATAGAGTTTA+TGG 0.197162 2_4:-9814351 Msa0314170:five_prime_UTR
TCAACACAAGCCTTACAAAT+TGG 0.207367 2_4:+9814204 None:intergenic
ATCTATAACCAGTCAATTAT+TGG 0.214723 2_4:+9808672 None:intergenic
CTTCTGTCTTCTCACTTGTT+TGG 0.216156 2_4:-9808973 Msa0314170:CDS
AATCATGCGGCTCGTAATAT+TGG 0.216166 2_4:-9812570 Msa0314170:CDS
CAACAACAAGATGAAGATTT+TGG 0.225152 2_4:+9810591 None:intergenic
TTTGATCATATGTTATGATA+TGG 0.240907 2_4:-9808841 Msa0314170:three_prime_UTR
TATTCTTTGGTCAGTGCTTT+TGG 0.244414 2_4:-9808996 Msa0314170:CDS
GTGTTACCATAGAAGATTTA+TGG 0.252451 2_4:-9809381 Msa0314170:CDS
TTCTGTCTTCTCACTTGTTT+GGG 0.253330 2_4:-9808972 Msa0314170:CDS
CTCCAACCATTGTTATTCTT+TGG 0.254720 2_4:-9809009 Msa0314170:CDS
CCTCTTTGGTATGGATTTGC+TGG 0.259446 2_4:-9809873 Msa0314170:CDS
GAGTATAGTTTGAGAAGTTA+AGG 0.269367 2_4:-9814367 Msa0314170:five_prime_UTR
CATCCAGTTGATAGTGCTTT+TGG 0.274318 2_4:-9812521 Msa0314170:CDS
CAATGGTTGGAGTACGGTTT+TGG 0.275754 2_4:+9809020 None:intergenic
GATCAATACCATCAAATCTT+TGG 0.280002 2_4:+9810891 None:intergenic
TATGGCGTAACGAGCAGTTC+TGG 0.280519 2_4:-9809363 Msa0314170:CDS
ATTCAGATTGGTTGGATATA+TGG 0.285850 2_4:-9810077 Msa0314170:intron
TTAGTAGACATTGTCCTCTT+TGG 0.288789 2_4:-9809887 Msa0314170:CDS
CTATTGATAGGAGACCATTT+AGG 0.297079 2_4:+9812434 None:intergenic
AACGAGCAGTTCTGGGTAAT+TGG 0.298572 2_4:-9809355 Msa0314170:CDS
CCATTCCTTAAGGGTCTTAT+GGG 0.301598 2_4:-9809046 Msa0314170:CDS
ATCAATACCATCAAATCTTT+GGG 0.308914 2_4:+9810892 None:intergenic
TCATCTTTATCCATTCCTTA+AGG 0.313408 2_4:-9809056 Msa0314170:CDS
CAACACCTGCTAACATCTTT+AGG 0.317097 2_4:+9809293 None:intergenic
CGACCATCCTGGCATGATTC+AGG 0.317609 2_4:-9811505 Msa0314170:intron
TTTCATTGAATCTACACTAA+TGG 0.318286 2_4:-9810303 Msa0314170:CDS
CATCTTTATCCATTCCTTAA+GGG 0.318968 2_4:-9809055 Msa0314170:CDS
CTGGATGTGTAACTCTATAA+TGG 0.320127 2_4:+9812537 None:intergenic
GTAGAATTAAATGATGAGTC+TGG 0.321242 2_4:-9813146 Msa0314170:intron
CTAAATGGTCTCCTATCAAT+AGG 0.324805 2_4:-9812433 Msa0314170:CDS
ATAAAGCTCTGAGACATCTT+TGG 0.326451 2_4:+9810548 None:intergenic
CTTATCATTATTAACCTTGT+TGG 0.328983 2_4:-9809172 Msa0314170:CDS
CCCTTTGAATGCAGGCCTTA+AGG 0.329006 2_4:+9809983 None:intergenic
CCTTTGAATGCAGGCCTTAA+GGG 0.330367 2_4:+9809984 None:intergenic
TCCAACTAATTCTTCCCTTA+AGG 0.333169 2_4:-9814435 Msa0314170:five_prime_UTR
ATGAGTCTGGGAATCCTATC+TGG 0.333861 2_4:-9813133 Msa0314170:CDS
TATTGATAGGAGACCATTTA+GGG 0.334357 2_4:+9812435 None:intergenic
GCTGCTGATGATGCAGAATT+TGG 0.338469 2_4:-9809244 Msa0314170:CDS
TGTTAGATCAGTTCCCTAAA+TGG 0.342957 2_4:-9812448 Msa0314170:CDS
CAAGTTCTTCGATGGGCTCT+TGG 0.344057 2_4:-9809927 Msa0314170:CDS
CAATTTATTGCATGCCCTTA+AGG 0.345404 2_4:-9809998 Msa0314170:CDS
CTGGGTAATTGGAGGTGTTT+CGG 0.353068 2_4:-9809344 Msa0314170:CDS
TGGTCGCGTGAATTATTTCC+TGG 0.359437 2_4:+9811522 None:intergenic
GTTGTTGTGGATTGATTTGC+AGG 0.367203 2_4:+9813660 None:intergenic
GTTACGCCATAAATCTTCTA+TGG 0.368229 2_4:+9809375 None:intergenic
GTCAATGAAGCAATCCTTAA+GGG 0.371344 2_4:+9814421 None:intergenic
AGTATAGTTTGAGAAGTTAA+GGG 0.375942 2_4:-9814366 Msa0314170:five_prime_UTR
TTTGTTTATGTCCAACTTCA+AGG 0.377580 2_4:+9814327 None:intergenic
CTATCAACTTTGCTCACAAA+TGG 0.379764 2_4:+9808938 None:intergenic
AGGTTACCAACACCACAAAA+AGG 0.388733 2_4:-9811169 Msa0314170:CDS
CCTGTGAGTAGGCAAATTGC+AGG 0.391040 2_4:+9809759 None:intergenic
TGGTGAAGGTGATTGTAGTA+TGG 0.392162 2_4:+9814478 None:intergenic
TTAATAATGATAAGACTTGT+TGG 0.397569 2_4:+9809181 None:intergenic
CTAACATCTTTAGGAATCCT+TGG 0.400962 2_4:+9809302 None:intergenic
TCAGAAGATTGACTATTTGA+AGG 0.405314 2_4:-9811933 Msa0314170:CDS
TGCATAGTCCACCCTTCATC+TGG 0.405419 2_4:+9811561 None:intergenic
AGCAGCTGCAGCCTCAGAGG+AGG 0.406357 2_4:+9812655 None:intergenic
ATCTGCTGTTCATGTGGAAC+TGG 0.406720 2_4:+9813029 None:intergenic
TAATGGTGGATATGAATCTT+GGG 0.406813 2_4:-9809122 Msa0314170:CDS
GTGACTGAGGATATCTTAAC+GGG 0.408774 2_4:-9810050 Msa0314170:CDS
AGTCAATGAAGCAATCCTTA+AGG 0.413983 2_4:+9814420 None:intergenic
CAACACAAGCCTTACAAATT+GGG 0.414895 2_4:+9814205 None:intergenic
AACCTTGTTGGTGTTGTAGC+TGG 0.415993 2_4:-9809160 Msa0314170:CDS
ATCATGCGGCTCGTAATATT+GGG 0.418633 2_4:-9812569 Msa0314170:CDS
TCTGAAACTGCTGCAGAGAC+TGG 0.423797 2_4:-9809844 Msa0314170:CDS
CATCTATCATCTGTGAGATC+TGG 0.425614 2_4:-9812487 Msa0314170:CDS
CAAGGTAGATAACATGAGTA+TGG 0.425707 2_4:+9808572 None:intergenic
GTGTTATTTCCCAATTTGTA+AGG 0.426117 2_4:-9814214 Msa0314170:CDS
TTAATGGTGGATATGAATCT+TGG 0.430333 2_4:-9809123 Msa0314170:CDS
AGACATTGTCCTCTTTGGTA+TGG 0.435333 2_4:-9809882 Msa0314170:CDS
CAAACATCTCTACCAACTAC+TGG 0.436494 2_4:+9810929 None:intergenic
TCCTTAAGGGAAGAATTAGT+TGG 0.438851 2_4:+9814434 None:intergenic
GAATCTTGGGGACCACTCAT+TGG 0.440256 2_4:-9809109 Msa0314170:CDS
GCCTCCTTGATCAGCATTGA+GGG 0.442247 2_4:+9810251 None:intergenic
CCAGTCTCAAAATCGAAACT+TGG 0.446012 2_4:-9812611 Msa0314170:CDS
GGCGACCCATAAGACCCTTA+AGG 0.446918 2_4:+9809041 None:intergenic
TACAATAAGCAACGAGGGGA+AGG 0.448543 2_4:+9809787 None:intergenic
CTACGTTCCTTCACAAAAGA+AGG 0.451548 2_4:+9811899 None:intergenic
GGAGTCTCATTTCCAGCCTT+AGG 0.452035 2_4:+9813050 None:intergenic
GGCGCTGACCCTTTGAATGC+AGG 0.456625 2_4:+9809975 None:intergenic
GTGAACTATATATGATCAAA+TGG 0.460410 2_4:-9809222 Msa0314170:CDS
AAGGAGGCCATTCATGTAAT+CGG 0.462285 2_4:-9810236 Msa0314170:CDS
CTCAGCAGCTGCAGCCTCAG+AGG 0.463990 2_4:+9812652 None:intergenic
TGCTAATGGAGAGGTGTTTG+TGG 0.464871 2_4:-9814247 Msa0314170:CDS
CCCTTAAGGCCTGCATTCAA+AGG 0.466918 2_4:-9809984 Msa0314170:CDS
AGACCAAAAGCACTATCAAC+TGG 0.467986 2_4:+9812518 None:intergenic
CATCCAGTCCCCACATATAC+AGG 0.468316 2_4:+9810669 None:intergenic
AAAGGACTTGACGGCATTCA+AGG 0.471693 2_4:-9810693 Msa0314170:CDS
GTAAAAGCAACCCTATTGAT+AGG 0.471729 2_4:+9812422 None:intergenic
TGCACAGATCAGCACTTCTC+AGG 0.471880 2_4:-9813634 Msa0314170:intron
ATAACATATGATCAAAACTT+TGG 0.473160 2_4:+9808848 None:intergenic
ATGGCGTAACGAGCAGTTCT+GGG 0.474093 2_4:-9809362 Msa0314170:CDS
CAAGTTGGAGTTGATGCTAA+TGG 0.475260 2_4:-9814261 Msa0314170:CDS
ATCAACGGCGGTTCTTTCAA+CGG 0.476719 2_4:+9812148 None:intergenic
ACCTTGTCAGCTTGCTCCTG+TGG 0.476795 2_4:-9812194 Msa0314170:CDS
TATTGTGTATTCAGATTGGT+TGG 0.477209 2_4:-9810085 Msa0314170:intron
CAGCTGACTTTGCAAGAAAG+TGG 0.477475 2_4:-9812012 Msa0314170:CDS
GTTTGCACCAAGTTCTTCGA+TGG 0.479288 2_4:-9809935 Msa0314170:CDS
AGTGGTGCTCACGACATAGA+AGG 0.480957 2_4:-9811237 Msa0314170:CDS
CAAGAGCCCATCGAAGAACT+TGG 0.484396 2_4:+9809928 None:intergenic
TAGAATTAAATGATGAGTCT+GGG 0.484813 2_4:-9813145 Msa0314170:CDS
ACTTTGGCAAGCACAATTGT+TGG 0.485186 2_4:+9808864 None:intergenic
GCCATTCATGTAATCGGTTG+TGG 0.485828 2_4:-9810230 Msa0314170:CDS
CATCGAAGAAAACTGTGTTC+CGG 0.486357 2_4:+9810849 None:intergenic
TAAATGGTCTCCTATCAATA+GGG 0.487621 2_4:-9812432 Msa0314170:CDS
AAACGATCGGAAAGATTGAT+TGG 0.491570 2_4:+9809954 None:intergenic
GAGTTTATGGTCCTTGAAGT+TGG 0.492514 2_4:-9814338 Msa0314170:five_prime_UTR
GTTTCCAGAGAGAAAAGGCC+AGG 0.493523 2_4:-9811189 Msa0314170:CDS
CAGTCAAGATTGAGAATGTA+GGG 0.493558 2_4:+9811010 None:intergenic
GCAGCTGCAGCCTCAGAGGA+GGG 0.494418 2_4:+9812656 None:intergenic
AGTGGAAAGTTGGAAGGAGA+AGG 0.496844 2_4:-9813102 Msa0314170:CDS
TCATGTTATGTTTCAGATGA+TGG 0.497524 2_4:-9812070 Msa0314170:CDS
GTTAATATGAAAGGACTTGA+CGG 0.500626 2_4:-9810702 Msa0314170:CDS
GACCAAAGAATAACAATGGT+TGG 0.504983 2_4:+9809007 None:intergenic
CATTCAAGGACCTGTATATG+TGG 0.505545 2_4:-9810679 Msa0314170:CDS
AGTTAATGCTTTGGTAGCTA+AGG 0.507653 2_4:-9811595 Msa0314170:CDS
GGATCCCTCAATGCTGATCA+AGG 0.508828 2_4:-9810255 Msa0314170:CDS
GGATTGATTTGCAGGAACTT+TGG 0.512377 2_4:+9813668 None:intergenic
AATAATTCACGCGACCATCC+TGG 0.512735 2_4:-9811516 Msa0314170:CDS
TTTCTGATGGATCCAGTAGT+TGG 0.512742 2_4:-9810941 Msa0314170:CDS
TAAAGTCAGAGTTAATGCTT+TGG 0.514285 2_4:-9811604 Msa0314170:CDS
AGTGACTGAGGATATCTTAA+CGG 0.514913 2_4:-9810051 Msa0314170:CDS
AATTGAAATATTATTGGTGA+AGG 0.515318 2_4:+9814464 None:intergenic
CCAGTGTTCTTGAGCTGAGG+TGG 0.517435 2_4:-9809408 Msa0314170:CDS
CCTGCAATTTGCCTACTCAC+AGG 0.518245 2_4:-9809759 Msa0314170:CDS
GAATAACAATGGTTGGAGTA+CGG 0.518540 2_4:+9809014 None:intergenic
TGTAGATAGAACAAGAGGTA+AGG 0.518619 2_4:-9813697 Msa0314170:intron
TGAAGGTGATTGTAGTATGG+TGG 0.519367 2_4:+9814481 None:intergenic
AAGAACTTGGTGCAAACGAT+CGG 0.519660 2_4:+9809941 None:intergenic
ACAGTCAAGATTGAGAATGT+AGG 0.519877 2_4:+9811009 None:intergenic
AAAGAGGACAATGTCTACTA+AGG 0.520358 2_4:+9809889 None:intergenic
GCTCAGAAAACACCAGATGA+AGG 0.520957 2_4:-9811573 Msa0314170:CDS
CAAGATGGAACCTCTTGGCC+AGG 0.521330 2_4:-9811540 Msa0314170:CDS
AGCTCTGAGACATCTTTGGC+AGG 0.529462 2_4:+9810552 None:intergenic
ATGATTATAACAGTTCTGTA+TGG 0.530674 2_4:+9812587 None:intergenic
CCATGTCAGGTTTGAAAGAG+AGG 0.530844 2_4:-9812221 Msa0314170:intron
TCATCCATCTGCTGTTCATG+TGG 0.531385 2_4:+9813023 None:intergenic
GCCACAACCGATTACATGAA+TGG 0.535283 2_4:+9810229 None:intergenic
CTGGAAACATAGACCAACCT+TGG 0.535961 2_4:+9811204 None:intergenic
CCCATAAGACCCTTAAGGAA+TGG 0.536403 2_4:+9809046 None:intergenic
GGATTCCTAAAGATGTTAGC+AGG 0.539539 2_4:-9809298 Msa0314170:CDS
TTTGCACCAAGTTCTTCGAT+GGG 0.539861 2_4:-9809934 Msa0314170:CDS
AAAGACAGCATGGGGAAAAG+AGG 0.541039 2_4:-9810198 Msa0314170:intron
CTTTGGCAGGCTTCTTTGAG+CGG 0.542540 2_4:+9810565 None:intergenic
CTATGCAAGATGGAACCTCT+TGG 0.544549 2_4:-9811545 Msa0314170:CDS
CGTGAGCACCACTGTGTCCA+AGG 0.546803 2_4:+9811247 None:intergenic
TCAAGATGCAATGTCGTGGA+TGG 0.547900 2_4:-9810025 Msa0314170:CDS
AGATGTGGCAATCCCTATGC+TGG 0.550041 2_4:-9814147 Msa0314170:intron
GAATCTACACTAATGGAGAA+TGG 0.550905 2_4:-9810296 Msa0314170:CDS
TAAAGAGACCAATAATTGAC+TGG 0.552549 2_4:-9808680 Msa0314170:three_prime_UTR
TAGTGTTACCATACCAGCAT+AGG 0.558357 2_4:+9814134 None:intergenic
AAATAGAGTGGAAAGTTGGA+AGG 0.558941 2_4:-9813108 Msa0314170:CDS
CAAAGTCAGCTGTCTCCACA+AGG 0.559322 2_4:+9812023 None:intergenic
AGCTGACTTTGCAAGAAAGT+GGG 0.560279 2_4:-9812011 Msa0314170:CDS
CCTTAAGGCCTGCATTCAAA+GGG 0.561090 2_4:-9809983 Msa0314170:CDS
CGAGGGGAAGGGATGTGAAA+GGG 0.562379 2_4:+9809799 None:intergenic
GGCTGGTGCTGAAAATGCAC+TGG 0.563372 2_4:-9811148 Msa0314170:intron
GGCCTCCTTGATCAGCATTG+AGG 0.563747 2_4:+9810250 None:intergenic
ACATTTCAGGTTAATATGAA+AGG 0.564196 2_4:-9810711 Msa0314170:intron
GCTTTATAAAGATGCAAAGA+GGG 0.565584 2_4:-9810532 Msa0314170:CDS
ACGAGGGGAAGGGATGTGAA+AGG 0.568075 2_4:+9809798 None:intergenic
AGGAAACGAACTTCCAAGGT+TGG 0.569266 2_4:-9811217 Msa0314170:CDS
CTTTGGTATGGATTTGCTGG+TGG 0.569669 2_4:-9809870 Msa0314170:CDS
AGATATACCTGAATCATGCC+AGG 0.571408 2_4:+9811498 None:intergenic
TAGAAGGAAACGAACTTCCA+AGG 0.571501 2_4:-9811221 Msa0314170:CDS
GTAGTGATCGATATGCCAAC+CGG 0.572003 2_4:-9810868 Msa0314170:CDS
GAAGGTGATTGTAGTATGGT+GGG 0.574818 2_4:+9814482 None:intergenic
ACTGGAATTATCACTGAAAG+TGG 0.576761 2_4:+9812629 None:intergenic
TCCACAGGAGCAAGCTGACA+AGG 0.577378 2_4:+9812193 None:intergenic
AGATGCAATGTCGTGGATGG+AGG 0.581673 2_4:-9810022 Msa0314170:CDS
AGTTCCACATGAACAGCAGA+TGG 0.583014 2_4:-9813027 Msa0314170:CDS
AACTCTTGTGGTGAACAAGT+TGG 0.583291 2_4:-9814276 Msa0314170:CDS
CTCAGAAAACACCAGATGAA+GGG 0.585547 2_4:-9811572 Msa0314170:CDS
GAGCAGTTCTGGGTAATTGG+AGG 0.587105 2_4:-9809352 Msa0314170:CDS
TTACGGACAGGCTCTCGGCA+AGG 0.587814 2_4:-9812403 Msa0314170:intron
ATTCAAGGACCTGTATATGT+GGG 0.589043 2_4:-9810678 Msa0314170:CDS
AGGACGTTGGACTCCATGCT+AGG 0.589336 2_4:-9813283 Msa0314170:CDS
GATCTGTGCAGCCGTTGTTG+TGG 0.589939 2_4:+9813647 None:intergenic
GGACCTGTATATGTGGGGAC+TGG 0.590486 2_4:-9810672 Msa0314170:CDS
CATGTCAGGTTTGAAAGAGA+GGG 0.592103 2_4:-9812220 Msa0314170:intron
TCTATGTTTCCAGAGAGAAA+AGG 0.594564 2_4:-9811194 Msa0314170:CDS
TTCTGAGAGAAGTAAAACTC+AGG 0.597805 2_4:+9811950 None:intergenic
ATAATGATAAGACTTGTTGG+AGG 0.598030 2_4:+9809184 None:intergenic
GCAAACACTACGTCCCTCAC+TGG 0.600483 2_4:+9814173 None:intergenic
AGTTCTTTCTATCCTTGCCG+TGG 0.604170 2_4:-9812113 Msa0314170:CDS
CAGTACTGATATGCCTAGCA+TGG 0.605414 2_4:+9813270 None:intergenic
AGTGTTACCATACCAGCATA+GGG 0.606549 2_4:+9814135 None:intergenic
GCTTGCATTATGTAGGACGT+TGG 0.606637 2_4:-9813296 Msa0314170:intron
GCTACGAAGAAAAGACAGCA+TGG 0.608415 2_4:-9810208 Msa0314170:CDS
CTACGAAGAAAAGACAGCAT+GGG 0.610425 2_4:-9810207 Msa0314170:CDS
CCACCTCAGCTCAAGAACAC+TGG 0.612331 2_4:+9809408 None:intergenic
CAAAGTACAATAAGCAACGA+GGG 0.616695 2_4:+9809782 None:intergenic
CCTTGCCGTGGACTATCCTG+TGG 0.617307 2_4:-9812101 Msa0314170:CDS
ACAATAAGCAACGAGGGGAA+GGG 0.618532 2_4:+9809788 None:intergenic
GAAGAAAACTGTGTTCCGGT+TGG 0.618594 2_4:+9810853 None:intergenic
GAAGGGTGGACTATGCAAGA+TGG 0.623650 2_4:-9811555 Msa0314170:CDS
CGTAGTGTTTGCTTGAGATG+TGG 0.626438 2_4:-9814162 Msa0314170:CDS
CAGACTATGATGAGTATGAG+AGG 0.626804 2_4:-9810379 Msa0314170:CDS
GTACTGACAAAGAAATCCAC+AGG 0.626913 2_4:+9812178 None:intergenic
AAGTAAAACTCAGGTGCACG+TGG 0.627075 2_4:+9811959 None:intergenic
AGGAAAATTCATCATACCAA+CGG 0.627464 2_4:-9809739 Msa0314170:intron
TTGATGATGATTCAATTGCA+AGG 0.628156 2_4:-9808802 Msa0314170:three_prime_UTR
AGCTTTATAAAGATGCAAAG+AGG 0.631014 2_4:-9810533 Msa0314170:CDS
GATATATGGTTCAGTGACTG+AGG 0.631286 2_4:-9810063 Msa0314170:CDS
TACGAAGAAAAGACAGCATG+GGG 0.632594 2_4:-9810206 Msa0314170:CDS
GGGTTCAAGATGCAATGTCG+TGG 0.634201 2_4:-9810029 Msa0314170:CDS
TGAATTATTTCCTGGCCAAG+AGG 0.637280 2_4:+9811530 None:intergenic
ATACCTGAATCATGCCAGGA+TGG 0.638411 2_4:+9811502 None:intergenic
ACTGTGTTAGCTGTGATCAA+CGG 0.640138 2_4:+9812133 None:intergenic
CCAGCAAATCCATACCAAAG+AGG 0.645200 2_4:+9809873 None:intergenic
AATGGTGGATATGAATCTTG+GGG 0.645925 2_4:-9809121 Msa0314170:CDS
GCTGACATTTGAATCCCTTG+TGG 0.648985 2_4:-9812038 Msa0314170:CDS
CCACAGGATAGTCCACGGCA+AGG 0.649649 2_4:+9812101 None:intergenic
TGGTGGTGTGTCTGAATCTG+CGG 0.650585 2_4:-9810276 Msa0314170:CDS
AGAAAACACCAGATGAAGGG+TGG 0.652717 2_4:-9811569 Msa0314170:CDS
TCATTATGTTAACAATAGCA+AGG 0.652996 2_4:-9810984 Msa0314170:CDS
TGTAGATTCAATGAAAACAG+TGG 0.654650 2_4:+9810310 None:intergenic
TGCAAATCAATCCACAACAA+CGG 0.656384 2_4:-9813658 Msa0314170:CDS
TCAATACCATCAAATCTTTG+GGG 0.656574 2_4:+9810893 None:intergenic
CACTGACCAAAGAATAACAA+TGG 0.657457 2_4:+9809003 None:intergenic
ACAGAACTGTTATAATCATG+CGG 0.661205 2_4:-9812583 Msa0314170:CDS
TGACCAGTGTTCTTGAGCTG+AGG 0.662591 2_4:-9809411 Msa0314170:CDS
TTCAAGGACCTGTATATGTG+GGG 0.662756 2_4:-9810677 Msa0314170:CDS
GTTCTTGAGCTGAGGTGGAG+CGG 0.667058 2_4:-9809403 Msa0314170:CDS
TATCAGTACTGTGTCAACAG+TGG 0.667329 2_4:-9813258 Msa0314170:CDS
ATCCAGCTACAACACCAACA+AGG 0.679092 2_4:+9809158 None:intergenic
TGGAGTTGATGCTAATGGAG+AGG 0.686489 2_4:-9814256 Msa0314170:CDS
CAATACCATCAAATCTTTGG+GGG 0.690770 2_4:+9810894 None:intergenic
GGATGTGAAAGGGTAAACGA+TGG 0.692923 2_4:+9809809 None:intergenic
AAAGTACAATAAGCAACGAG+GGG 0.696943 2_4:+9809783 None:intergenic
AAAGTCAGCTGTCTCCACAA+GGG 0.704045 2_4:+9812024 None:intergenic
GTGTTAGCTGTGATCAACGG+CGG 0.713429 2_4:+9812136 None:intergenic
AGGGAACTGATCTAACACCC+AGG 0.715025 2_4:+9812454 None:intergenic
GTTGATTATGAGACCAGTGA+GGG 0.718162 2_4:-9814186 Msa0314170:CDS
ACTGTGTCAACAGTGGACAG+TGG 0.722721 2_4:-9813251 Msa0314170:intron
GCAAAGTACAATAAGCAACG+AGG 0.722782 2_4:+9809781 None:intergenic
TCCCTCAATGCTGATCAAGG+AGG 0.726123 2_4:-9810252 Msa0314170:CDS
TGTTGATTATGAGACCAGTG+AGG 0.750754 2_4:-9814187 Msa0314170:CDS
TCTACACTAATGGAGAATGG+TGG 0.757581 2_4:-9810293 Msa0314170:CDS
TGACTGAGGATATCTTAACG+GGG 0.810778 2_4:-9810049 Msa0314170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTTATATTTCCAATATA+TGG - chr2_4:9809051-9809070 Msa0314170:CDS 15.0%
!!! TGGGAAAATATAAATTTTTA+AGG - chr2_4:9809732-9809751 Msa0314170:intron 15.0%
!!! TATAAATTTTTAAGGACAAT+AGG - chr2_4:9809740-9809759 Msa0314170:CDS 15.0%
!! CAAAAAAAAAAAGAAGAAAA+AGG - chr2_4:9810058-9810077 Msa0314170:CDS 15.0%
!!! CATTTTATATAATTTTGTTC+AGG + chr2_4:9810174-9810193 None:intergenic 15.0%
!!! TTTAGAAGTATTTATGATTA+AGG - chr2_4:9810236-9810255 Msa0314170:CDS 15.0%
!! ATGAAAAATCAACAATATTA+TGG + chr2_4:9810343-9810362 None:intergenic 15.0%
!! TTCATATAAAATGAATTGTA+CGG - chr2_4:9811323-9811342 Msa0314170:intron 15.0%
!!! TAATTTTCTCATCTTTATTT+TGG - chr2_4:9813420-9813439 Msa0314170:intron 15.0%
!!! CTTAGTTTTTTATTAGTTAT+TGG + chr2_4:9813568-9813587 None:intergenic 15.0%
!! AATTGAAAAATCATATAACA+AGG + chr2_4:9814585-9814604 None:intergenic 15.0%
!! AATTGAAATATTATTGGTGA+AGG + chr2_4:9808675-9808694 None:intergenic 20.0%
!! TGTACAATCTAATTAAAAAG+AGG - chr2_4:9809264-9809283 Msa0314170:CDS 20.0%
!! ATTATTTGTTTCATTCACTT+AGG - chr2_4:9809355-9809374 Msa0314170:CDS 20.0%
!! TAACATTAGTACATTACAAT+AGG - chr2_4:9809539-9809558 Msa0314170:intron 20.0%
!!! ATTTATATTTTCCCAAAAAC+TGG + chr2_4:9809727-9809746 None:intergenic 20.0%
!!! GATTTTTCATCAACATATTA+TGG - chr2_4:9810353-9810372 Msa0314170:CDS 20.0%
!!! CACTTGTTTATTATTTTTGT+TGG - chr2_4:9810422-9810441 Msa0314170:intron 20.0%
!!! ATTCATTTTCTTGAAGTATA+AGG + chr2_4:9810786-9810805 None:intergenic 20.0%
!! ACAGTAAAGTAATATCTAAA+TGG - chr2_4:9810819-9810838 Msa0314170:intron 20.0%
!! GTGACATCATTATAATTAAT+TGG - chr2_4:9811777-9811796 Msa0314170:intron 20.0%
!! TATTAAAATGAAAGCTGAAT+CGG + chr2_4:9811847-9811866 None:intergenic 20.0%
!! ACTTTATAGACTCATTAATA+AGG - chr2_4:9812706-9812725 Msa0314170:intron 20.0%
!! TTAATAATGATAAGACTTGT+TGG + chr2_4:9813958-9813977 None:intergenic 20.0%
!! ATAACATATGATCAAAACTT+TGG + chr2_4:9814291-9814310 None:intergenic 20.0%
!! TTTGATCATATGTTATGATA+TGG - chr2_4:9814295-9814314 Msa0314170:CDS 20.0%
!!! TGTAAGCATTTTGAATTATA+AGG - chr2_4:9814393-9814412 Msa0314170:five_prime_UTR 20.0%
!! AGATATCAATGTAAAAATAG+TGG - chr2_4:9814483-9814502 Msa0314170:five_prime_UTR 20.0%
!! TCTCAAACTATACTCTTTTA+TGG + chr2_4:9808764-9808783 None:intergenic 25.0%
! AGTATAGTTTGAGAAGTTAA+GGG - chr2_4:9808770-9808789 Msa0314170:three_prime_UTR 25.0%
! TTGGACATAAACAAAAATGA+TGG - chr2_4:9808817-9808836 Msa0314170:three_prime_UTR 25.0%
!! TAAACAAAAATGATGGAATC+AGG - chr2_4:9808824-9808843 Msa0314170:three_prime_UTR 25.0%
! TGCAAAATGAAACAAACTTT+AGG + chr2_4:9809414-9809433 None:intergenic 25.0%
!! TATTTTGTAGATAGAACAAG+AGG - chr2_4:9809434-9809453 Msa0314170:CDS 25.0%
!!! TAACCTTAGTTTTTGAGATT+TGG - chr2_4:9809575-9809594 Msa0314170:intron 25.0%
! TAACTGTTAGATGAAAAGAT+CGG + chr2_4:9809668-9809687 None:intergenic 25.0%
! TAGAATTAAATGATGAGTCT+GGG - chr2_4:9809991-9810010 Msa0314170:CDS 25.0%
!!! TTAAGGTCAAACGTTTTTTA+TGG - chr2_4:9810253-9810272 Msa0314170:CDS 25.0%
! ATCAGAATAAATATTGAGCA+AGG + chr2_4:9810448-9810467 None:intergenic 25.0%
!! TTTATTCTGATCTATTTTGC+AGG - chr2_4:9810457-9810476 Msa0314170:intron 25.0%
! ATGATTATAACAGTTCTGTA+TGG + chr2_4:9810552-9810571 None:intergenic 25.0%
! ACTTCAAGAAAATGAATCAA+TGG - chr2_4:9810789-9810808 Msa0314170:intron 25.0%
!! ATCTCAAACTTTTTGCAAAA+TGG + chr2_4:9811153-9811172 None:intergenic 25.0%
! TTGGCTATAGAATTATTGAA+AGG - chr2_4:9811734-9811753 Msa0314170:intron 25.0%
! TCACATACATCAACAATATT+TGG + chr2_4:9811761-9811780 None:intergenic 25.0%
! ACGCTTATTTCGATTATTAT+AGG - chr2_4:9812074-9812093 Msa0314170:CDS 25.0%
! TCATTATGTTAACAATAGCA+AGG - chr2_4:9812152-9812171 Msa0314170:CDS 25.0%
! ATCAATACCATCAAATCTTT+GGG + chr2_4:9812247-9812266 None:intergenic 25.0%
!!! CATTGACTTTAACAATTATG+AGG - chr2_4:9812358-9812377 Msa0314170:intron 25.0%
!!! ACATTTCAGGTTAATATGAA+AGG - chr2_4:9812425-9812444 Msa0314170:CDS 25.0%
!!! AAGATGAAGATTTTGGTAAT+GGG + chr2_4:9812541-9812560 None:intergenic 25.0%
! CATTAATAAGGCATATCTTT+CGG - chr2_4:9812718-9812737 Msa0314170:intron 25.0%
!!! CTTAGCTTTGAAAAAACATT+TGG - chr2_4:9812798-9812817 Msa0314170:intron 25.0%
! TTTCATTGAATCTACACTAA+TGG - chr2_4:9812833-9812852 Msa0314170:intron 25.0%
! GTGAACTATATATGATCAAA+TGG - chr2_4:9813914-9813933 Msa0314170:intron 25.0%
! CTTATCATTATTAACCTTGT+TGG - chr2_4:9813964-9813983 Msa0314170:intron 25.0%
!! AAAAGTTTTCTTCGCATTTT+GGG - chr2_4:9814050-9814069 Msa0314170:intron 25.0%
! ATCTATAACCAGTCAATTAT+TGG + chr2_4:9814467-9814486 None:intergenic 25.0%
! ATTTTCAGAAGTTAAGTGGT+TGG + chr2_4:9808631-9808650 None:intergenic 30.0%
! GTTCATTTTCAGAAGTTAAG+TGG + chr2_4:9808635-9808654 None:intergenic 30.0%
GAGTATAGTTTGAGAAGTTA+AGG - chr2_4:9808769-9808788 Msa0314170:three_prime_UTR 30.0%
TTTGTTTATGTCCAACTTCA+AGG + chr2_4:9808812-9808831 None:intergenic 30.0%
!! GTGTTATTTCCCAATTTGTA+AGG - chr2_4:9808922-9808941 Msa0314170:CDS 30.0%
TAGAATTAGAGTGTACAGTT+AGG + chr2_4:9809030-9809049 None:intergenic 30.0%
GAAGTTACAGATCCATATAT+TGG + chr2_4:9809066-9809085 None:intergenic 30.0%
AGTCCAAATCTCAAAAACTA+AGG + chr2_4:9809581-9809600 None:intergenic 30.0%
TTCACCAAACTTTGATATCT+GGG + chr2_4:9809628-9809647 None:intergenic 30.0%
ACAAACTGATAGTCATAAGT+TGG - chr2_4:9809959-9809978 Msa0314170:CDS 30.0%
GTAGAATTAAATGATGAGTC+TGG - chr2_4:9809990-9810009 Msa0314170:CDS 30.0%
ACAGAACTGTTATAATCATG+CGG - chr2_4:9810553-9810572 Msa0314170:CDS 30.0%
TATTGATAGGAGACCATTTA+GGG + chr2_4:9810704-9810723 None:intergenic 30.0%
TAAATGGTCTCCTATCAATA+GGG - chr2_4:9810704-9810723 Msa0314170:CDS 30.0%
!!! TATCAATAGGGTTGCTTTTA+CGG - chr2_4:9810716-9810735 Msa0314170:intron 30.0%
AAACTTTATATTGCCATGTC+AGG - chr2_4:9810902-9810921 Msa0314170:CDS 30.0%
!!! TAACATGATACTTTTTCCAC+AGG + chr2_4:9811054-9811073 None:intergenic 30.0%
TCATGTTATGTTTCAGATGA+TGG - chr2_4:9811066-9811085 Msa0314170:intron 30.0%
TCAGAAGATTGACTATTTGA+AGG - chr2_4:9811203-9811222 Msa0314170:CDS 30.0%
AATACTGAATGTCAGAAACA+AGG + chr2_4:9811456-9811475 None:intergenic 30.0%
TAAAGTCAGAGTTAATGCTT+TGG - chr2_4:9811532-9811551 Msa0314170:CDS 30.0%
AATCAAATCTCAATGATGAG+AGG - chr2_4:9811676-9811695 Msa0314170:intron 30.0%
TAATATCTGTTATCATCGTC+AGG - chr2_4:9811862-9811881 Msa0314170:intron 30.0%
TCAATACCATCAAATCTTTG+GGG + chr2_4:9812246-9812265 None:intergenic 30.0%
GATCAATACCATCAAATCTT+TGG + chr2_4:9812248-9812267 None:intergenic 30.0%
GTTAATATGAAAGGACTTGA+CGG - chr2_4:9812434-9812453 Msa0314170:CDS 30.0%
!!! AGATGAAGATTTTGGTAATG+GGG + chr2_4:9812540-9812559 None:intergenic 30.0%
!! CAAGATGAAGATTTTGGTAA+TGG + chr2_4:9812542-9812561 None:intergenic 30.0%
! CAACAACAAGATGAAGATTT+TGG + chr2_4:9812548-9812567 None:intergenic 30.0%
! AGCTTTATAAAGATGCAAAG+AGG - chr2_4:9812603-9812622 Msa0314170:CDS 30.0%
GCTTTATAAAGATGCAAAGA+GGG - chr2_4:9812604-9812623 Msa0314170:CDS 30.0%
!!! ATGCTGCTATTTTTAATCTC+AGG - chr2_4:9812636-9812655 Msa0314170:CDS 30.0%
!!! TGCTGCTATTTTTAATCTCA+GGG - chr2_4:9812637-9812656 Msa0314170:CDS 30.0%
TGTAGATTCAATGAAAACAG+TGG + chr2_4:9812829-9812848 None:intergenic 30.0%
TTATCTTACAAGACACTGAA+AGG + chr2_4:9813000-9813019 None:intergenic 30.0%
TATTGTGTATTCAGATTGGT+TGG - chr2_4:9813051-9813070 Msa0314170:CDS 30.0%
! ATTCAGATTGGTTGGATATA+TGG - chr2_4:9813059-9813078 Msa0314170:CDS 30.0%
AGGAAAATTCATCATACCAA+CGG - chr2_4:9813397-9813416 Msa0314170:intron 30.0%
AAAGATGAGAAAATTACCGT+TGG + chr2_4:9813416-9813435 None:intergenic 30.0%
GTTCTTACATCAAATTGTTG+TGG - chr2_4:9813636-9813655 Msa0314170:CDS 30.0%
GTGTTACCATAGAAGATTTA+TGG - chr2_4:9813755-9813774 Msa0314170:intron 30.0%
!! ATAATGATAAGACTTGTTGG+AGG + chr2_4:9813955-9813974 None:intergenic 30.0%
!! TTAATGGTGGATATGAATCT+TGG - chr2_4:9814013-9814032 Msa0314170:intron 30.0%
!! TAATGGTGGATATGAATCTT+GGG - chr2_4:9814014-9814033 Msa0314170:intron 30.0%
! AAGAAAACTTTTCCAATGAG+TGG + chr2_4:9814042-9814061 None:intergenic 30.0%
! GAAAAGTTTTCTTCGCATTT+TGG - chr2_4:9814049-9814068 Msa0314170:intron 30.0%
TCATCTTTATCCATTCCTTA+AGG - chr2_4:9814080-9814099 Msa0314170:intron 30.0%
CATCTTTATCCATTCCTTAA+GGG - chr2_4:9814081-9814100 Msa0314170:intron 30.0%
!! TTGATGATGATTCAATTGCA+AGG - chr2_4:9814334-9814353 Msa0314170:five_prime_UTR 30.0%
! TGTACTTTTATTCCATGCTT+TGG - chr2_4:9814419-9814438 Msa0314170:five_prime_UTR 30.0%
TAAAGAGACCAATAATTGAC+TGG - chr2_4:9814456-9814475 Msa0314170:five_prime_UTR 30.0%
TCCAACTAATTCTTCCCTTA+AGG - chr2_4:9808701-9808720 Msa0314170:three_prime_UTR 35.0%
TCCTTAAGGGAAGAATTAGT+TGG + chr2_4:9808705-9808724 None:intergenic 35.0%
GTCAATGAAGCAATCCTTAA+GGG + chr2_4:9808718-9808737 None:intergenic 35.0%
AGTCAATGAAGCAATCCTTA+AGG + chr2_4:9808719-9808738 None:intergenic 35.0%
GTTAAGGGTCATAGAGTTTA+TGG - chr2_4:9808785-9808804 Msa0314170:three_prime_UTR 35.0%
!!! GTTAGCTTTTGTAACTCTTG+TGG - chr2_4:9808848-9808867 Msa0314170:three_prime_UTR 35.0%
CAACACAAGCCTTACAAATT+GGG + chr2_4:9808934-9808953 None:intergenic 35.0%
TCAACACAAGCCTTACAAAT+TGG + chr2_4:9808935-9808954 None:intergenic 35.0%
!!! ACTTTTCCTTCTAGTTTTCG+TGG - chr2_4:9809092-9809111 Msa0314170:CDS 35.0%
GAATGCTTCAAATCGTTGAA+TGG + chr2_4:9809322-9809341 None:intergenic 35.0%
TGTAGATAGAACAAGAGGTA+AGG - chr2_4:9809439-9809458 Msa0314170:CDS 35.0%
TGCAAATCAATCCACAACAA+CGG - chr2_4:9809478-9809497 Msa0314170:intron 35.0%
CTTCACCAAACTTTGATATC+TGG + chr2_4:9809629-9809648 None:intergenic 35.0%
! AGAATCTAGGTCCAGTTTTT+GGG - chr2_4:9809713-9809732 Msa0314170:intron 35.0%
TCCTATCTGGAAAAATAGAG+TGG - chr2_4:9810016-9810035 Msa0314170:CDS 35.0%
!! TCCACTCTATTTTTCCAGAT+AGG + chr2_4:9810020-9810039 None:intergenic 35.0%
GGAAAAATAGAGTGGAAAGT+TGG - chr2_4:9810024-9810043 Msa0314170:CDS 35.0%
AAATAGAGTGGAAAGTTGGA+AGG - chr2_4:9810028-9810047 Msa0314170:CDS 35.0%
TGCAGTAAGTTCATTGAGAA+AGG - chr2_4:9810138-9810157 Msa0314170:intron 35.0%
ATCACATCGTTGTAATTGCA+CGG - chr2_4:9810376-9810395 Msa0314170:CDS 35.0%
ACTGGAATTATCACTGAAAG+TGG + chr2_4:9810510-9810529 None:intergenic 35.0%
CTGGATGTGTAACTCTATAA+TGG + chr2_4:9810602-9810621 None:intergenic 35.0%
TGTTAGATCAGTTCCCTAAA+TGG - chr2_4:9810688-9810707 Msa0314170:CDS 35.0%
CTATTGATAGGAGACCATTT+AGG + chr2_4:9810705-9810724 None:intergenic 35.0%
CTAAATGGTCTCCTATCAAT+AGG - chr2_4:9810703-9810722 Msa0314170:CDS 35.0%
GTAAAAGCAACCCTATTGAT+AGG + chr2_4:9810717-9810736 None:intergenic 35.0%
CAAGGTAATTGGAAGCTATT+TGG - chr2_4:9810751-9810770 Msa0314170:intron 35.0%
! TTCTGAGAGAAGTAAAACTC+AGG + chr2_4:9811189-9811208 None:intergenic 35.0%
! AGTTCAACCTTCTTTTGTGA+AGG - chr2_4:9811230-9811249 Msa0314170:CDS 35.0%
! AGTTAATGCTTTGGTAGCTA+AGG - chr2_4:9811541-9811560 Msa0314170:CDS 35.0%
TCTATGTTTCCAGAGAGAAA+AGG - chr2_4:9811942-9811961 Msa0314170:CDS 35.0%
! TAAGCTCGTCAAGATTTTGT+AGG - chr2_4:9812046-9812065 Msa0314170:CDS 35.0%
! AAGCTCGTCAAGATTTTGTA+GGG - chr2_4:9812047-9812066 Msa0314170:CDS 35.0%
CAGTCAAGATTGAGAATGTA+GGG + chr2_4:9812129-9812148 None:intergenic 35.0%
ACAGTCAAGATTGAGAATGT+AGG + chr2_4:9812130-9812149 None:intergenic 35.0%
CAATACCATCAAATCTTTGG+GGG + chr2_4:9812245-9812264 None:intergenic 35.0%
CAATTATGAGGCGAAAATCA+TGG - chr2_4:9812370-9812389 Msa0314170:intron 35.0%
TATTAACCTGAAATGTGTCG+AGG + chr2_4:9812421-9812440 None:intergenic 35.0%
ATTCAAGGACCTGTATATGT+GGG - chr2_4:9812458-9812477 Msa0314170:CDS 35.0%
!!! GATGAAGATTTTGGTAATGG+GGG + chr2_4:9812539-9812558 None:intergenic 35.0%
!! ATAAAGCTCTGAGACATCTT+TGG + chr2_4:9812591-9812610 None:intergenic 35.0%
GAATCTACACTAATGGAGAA+TGG - chr2_4:9812840-9812859 Msa0314170:intron 35.0%
TCTGAATACACAATACAGCA+AGG + chr2_4:9813046-9813065 None:intergenic 35.0%
GCTGTATTGTGTATTCAGAT+TGG - chr2_4:9813047-9813066 Msa0314170:CDS 35.0%
AGTGACTGAGGATATCTTAA+CGG - chr2_4:9813085-9813104 Msa0314170:CDS 35.0%
CAATTTATTGCATGCCCTTA+AGG - chr2_4:9813138-9813157 Msa0314170:CDS 35.0%
AAACGATCGGAAAGATTGAT+TGG + chr2_4:9813185-9813204 None:intergenic 35.0%
AAAGAGGACAATGTCTACTA+AGG + chr2_4:9813250-9813269 None:intergenic 35.0%
TTAGTAGACATTGTCCTCTT+TGG - chr2_4:9813249-9813268 Msa0314170:intron 35.0%
AAAGTACAATAAGCAACGAG+GGG + chr2_4:9813356-9813375 None:intergenic 35.0%
CAAAGTACAATAAGCAACGA+GGG + chr2_4:9813357-9813376 None:intergenic 35.0%
! TGATGAATTTTCCTGTGAGT+AGG + chr2_4:9813391-9813410 None:intergenic 35.0%
!!! ATTGCAAGTGCACTTTTTCT+TGG - chr2_4:9813682-9813701 Msa0314170:CDS 35.0%
GTTACGCCATAAATCTTCTA+TGG + chr2_4:9813764-9813783 None:intergenic 35.0%
! CTAACATCTTTAGGAATCCT+TGG + chr2_4:9813837-9813856 None:intergenic 35.0%
! GGATTTTCTGATGCACTTAA+TGG - chr2_4:9813997-9814016 Msa0314170:intron 35.0%
! TTTTCTGATGCACTTAATGG+TGG - chr2_4:9814000-9814019 Msa0314170:intron 35.0%
!! AATGGTGGATATGAATCTTG+GGG - chr2_4:9814015-9814034 Msa0314170:intron 35.0%
GAATAACAATGGTTGGAGTA+CGG + chr2_4:9814125-9814144 None:intergenic 35.0%
! CTCCAACCATTGTTATTCTT+TGG - chr2_4:9814127-9814146 Msa0314170:intron 35.0%
GACCAAAGAATAACAATGGT+TGG + chr2_4:9814132-9814151 None:intergenic 35.0%
CACTGACCAAAGAATAACAA+TGG + chr2_4:9814136-9814155 None:intergenic 35.0%
! TATTCTTTGGTCAGTGCTTT+TGG - chr2_4:9814140-9814159 Msa0314170:intron 35.0%
TTCTGTCTTCTCACTTGTTT+GGG - chr2_4:9814164-9814183 Msa0314170:CDS 35.0%
CTATCAACTTTGCTCACAAA+TGG + chr2_4:9814201-9814220 None:intergenic 35.0%
CAGAAAAATTGTCCAAAGCA+TGG + chr2_4:9814434-9814453 None:intergenic 35.0%
CAAGGTAGATAACATGAGTA+TGG + chr2_4:9814567-9814586 None:intergenic 35.0%
GAAGGTGATTGTAGTATGGT+GGG + chr2_4:9808657-9808676 None:intergenic 40.0%
TGAAGGTGATTGTAGTATGG+TGG + chr2_4:9808658-9808677 None:intergenic 40.0%
TGGTGAAGGTGATTGTAGTA+TGG + chr2_4:9808661-9808680 None:intergenic 40.0%
GAGTTTATGGTCCTTGAAGT+TGG - chr2_4:9808798-9808817 Msa0314170:three_prime_UTR 40.0%
AACTCTTGTGGTGAACAAGT+TGG - chr2_4:9808860-9808879 Msa0314170:three_prime_UTR 40.0%
!! CAAGTTGGAGTTGATGCTAA+TGG - chr2_4:9808875-9808894 Msa0314170:three_prime_UTR 40.0%
! TGTTGATTATGAGACCAGTG+AGG - chr2_4:9808949-9808968 Msa0314170:CDS 40.0%
GTTGATTATGAGACCAGTGA+GGG - chr2_4:9808950-9808969 Msa0314170:CDS 40.0%
AGTGTTACCATACCAGCATA+GGG + chr2_4:9809004-9809023 None:intergenic 40.0%
TAGTGTTACCATACCAGCAT+AGG + chr2_4:9809005-9809024 None:intergenic 40.0%
TGGCATGGTTGTATTTGACT+TGG - chr2_4:9809112-9809131 Msa0314170:CDS 40.0%
!! GGATTGATTTGCAGGAACTT+TGG + chr2_4:9809471-9809490 None:intergenic 40.0%
!! GTTGTTGTGGATTGATTTGC+AGG + chr2_4:9809479-9809498 None:intergenic 40.0%
CGATCCCAGATATCAAAGTT+TGG - chr2_4:9809621-9809640 Msa0314170:intron 40.0%
AAGATCGGATGACTCATACT+AGG + chr2_4:9809653-9809672 None:intergenic 40.0%
! GAGAATCTAGGTCCAGTTTT+TGG - chr2_4:9809712-9809731 Msa0314170:intron 40.0%
AACCTCTGCTTGCATTATGT+AGG - chr2_4:9809833-9809852 Msa0314170:CDS 40.0%
TATCAGTACTGTGTCAACAG+TGG - chr2_4:9809878-9809897 Msa0314170:CDS 40.0%
!! GAAGAAAAAGGAAGCACCTA+AGG - chr2_4:9810070-9810089 Msa0314170:CDS 40.0%
!!! CCAAGTTTCGATTTTGAGAC+TGG + chr2_4:9810528-9810547 None:intergenic 40.0%
CCAGTCTCAAAATCGAAACT+TGG - chr2_4:9810525-9810544 Msa0314170:CDS 40.0%
AATCATGCGGCTCGTAATAT+TGG - chr2_4:9810566-9810585 Msa0314170:CDS 40.0%
ATCATGCGGCTCGTAATATT+GGG - chr2_4:9810567-9810586 Msa0314170:CDS 40.0%
!!! CATCCAGTTGATAGTGCTTT+TGG - chr2_4:9810615-9810634 Msa0314170:CDS 40.0%
!! AGACCAAAAGCACTATCAAC+TGG + chr2_4:9810621-9810640 None:intergenic 40.0%
!!! TTGATAGTGCTTTTGGTCTG+TGG - chr2_4:9810622-9810641 Msa0314170:CDS 40.0%
CATCTATCATCTGTGAGATC+TGG - chr2_4:9810649-9810668 Msa0314170:CDS 40.0%
!!! AGATCTGGTTTGCTTTTTCC+TGG - chr2_4:9810664-9810683 Msa0314170:CDS 40.0%
!!! GATCTGGTTTGCTTTTTCCT+GGG - chr2_4:9810665-9810684 Msa0314170:CDS 40.0%
CATGTCAGGTTTGAAAGAGA+GGG - chr2_4:9810916-9810935 Msa0314170:CDS 40.0%
! GTACTGACAAAGAAATCCAC+AGG + chr2_4:9810961-9810980 None:intergenic 40.0%
ACTGTGTTAGCTGTGATCAA+CGG + chr2_4:9811006-9811025 None:intergenic 40.0%
! TTTTTCCACAGGATAGTCCA+CGG + chr2_4:9811043-9811062 None:intergenic 40.0%
! AGCTGACTTTGCAAGAAAGT+GGG - chr2_4:9811125-9811144 Msa0314170:intron 40.0%
CTACGTTCCTTCACAAAAGA+AGG + chr2_4:9811240-9811259 None:intergenic 40.0%
ACTGAATGTCAGAAACAAGG+TGG + chr2_4:9811453-9811472 None:intergenic 40.0%
CTCAGAAAACACCAGATGAA+GGG - chr2_4:9811564-9811583 Msa0314170:CDS 40.0%
TGAATTATTTCCTGGCCAAG+AGG + chr2_4:9811609-9811628 None:intergenic 40.0%
AGATATACCTGAATCATGCC+AGG + chr2_4:9811641-9811660 None:intergenic 40.0%
! GATACCTAGTTTGTGCAACT+TGG - chr2_4:9811715-9811734 Msa0314170:intron 40.0%
ATAGCCAAGTTGCACAAACT+AGG + chr2_4:9811722-9811741 None:intergenic 40.0%
! TATCATCGTCAGGTTTTCCT+TGG - chr2_4:9811872-9811891 Msa0314170:intron 40.0%
TAGAAGGAAACGAACTTCCA+AGG - chr2_4:9811915-9811934 Msa0314170:CDS 40.0%
!!! TTTTTGTGGTGTTGGTAACC+TGG + chr2_4:9811968-9811987 None:intergenic 40.0%
AGGTTACCAACACCACAAAA+AGG - chr2_4:9811967-9811986 Msa0314170:CDS 40.0%
! AGAAGCGATGTGTTTTCTGA+TGG - chr2_4:9812182-9812201 Msa0314170:CDS 40.0%
! TTTCTGATGGATCCAGTAGT+TGG - chr2_4:9812195-9812214 Msa0314170:CDS 40.0%
CAAACATCTCTACCAACTAC+TGG + chr2_4:9812210-9812229 None:intergenic 40.0%
CATCGAAGAAAACTGTGTTC+CGG + chr2_4:9812290-9812309 None:intergenic 40.0%
TTCTAACCTCGACACATTTC+AGG - chr2_4:9812412-9812431 Msa0314170:CDS 40.0%
CATTCAAGGACCTGTATATG+TGG - chr2_4:9812457-9812476 Msa0314170:CDS 40.0%
TTCAAGGACCTGTATATGTG+GGG - chr2_4:9812459-9812478 Msa0314170:CDS 40.0%
TTCAATCGACAAGCGCTTTA+TGG - chr2_4:9812494-9812513 Msa0314170:CDS 40.0%
CAGACTATGATGAGTATGAG+AGG - chr2_4:9812757-9812776 Msa0314170:intron 40.0%
TCTACACTAATGGAGAATGG+TGG - chr2_4:9812843-9812862 Msa0314170:intron 40.0%
AAGGAGGCCATTCATGTAAT+CGG - chr2_4:9812900-9812919 Msa0314170:intron 40.0%
CTACGAAGAAAAGACAGCAT+GGG - chr2_4:9812929-9812948 Msa0314170:intron 40.0%
TACGAAGAAAAGACAGCATG+GGG - chr2_4:9812930-9812949 Msa0314170:intron 40.0%
GATATATGGTTCAGTGACTG+AGG - chr2_4:9813073-9813092 Msa0314170:CDS 40.0%
GTGACTGAGGATATCTTAAC+GGG - chr2_4:9813086-9813105 Msa0314170:CDS 40.0%
TGACTGAGGATATCTTAACG+GGG - chr2_4:9813087-9813106 Msa0314170:CDS 40.0%
!! AAGAACTTGGTGCAAACGAT+CGG + chr2_4:9813198-9813217 None:intergenic 40.0%
TTTGCACCAAGTTCTTCGAT+GGG - chr2_4:9813202-9813221 Msa0314170:intron 40.0%
AGACATTGTCCTCTTTGGTA+TGG - chr2_4:9813254-9813273 Msa0314170:CDS 40.0%
GCAAAGTACAATAAGCAACG+AGG + chr2_4:9813358-9813377 None:intergenic 40.0%
!! CATCTTTTTGCTGTCTTCCA+AGG - chr2_4:9813817-9813836 Msa0314170:intron 40.0%
GGATTCCTAAAGATGTTAGC+AGG - chr2_4:9813838-9813857 Msa0314170:intron 40.0%
CAACACCTGCTAACATCTTT+AGG + chr2_4:9813846-9813865 None:intergenic 40.0%
TCCATTCCTTAAGGGTCTTA+TGG - chr2_4:9814089-9814108 Msa0314170:intron 40.0%
! CCATTCCTTAAGGGTCTTAT+GGG - chr2_4:9814090-9814109 Msa0314170:intron 40.0%
CTTCTGTCTTCTCACTTGTT+TGG - chr2_4:9814163-9814182 Msa0314170:CDS 40.0%
ACTTTGGCAAGCACAATTGT+TGG + chr2_4:9814275-9814294 None:intergenic 40.0%
!! TGGAGTTGATGCTAATGGAG+AGG - chr2_4:9808880-9808899 Msa0314170:exon 45.0%
!! TGCTAATGGAGAGGTGTTTG+TGG - chr2_4:9808889-9808908 Msa0314170:exon 45.0%
CGTAGTGTTTGCTTGAGATG+TGG - chr2_4:9808974-9808993 Msa0314170:CDS 45.0%
!!! TCCTTCTAGTTTTCGTGGCA+TGG - chr2_4:9809097-9809116 Msa0314170:CDS 45.0%
ACCATGCCACGAAAACTAGA+AGG + chr2_4:9809101-9809120 None:intergenic 45.0%
TACAGCACTGCAGAGAATCT+AGG - chr2_4:9809700-9809719 Msa0314170:intron 45.0%
GTCCTACATAATGCAAGCAG+AGG + chr2_4:9809838-9809857 None:intergenic 45.0%
GCTTGCATTATGTAGGACGT+TGG - chr2_4:9809840-9809859 Msa0314170:CDS 45.0%
!! CAGTACTGATATGCCTAGCA+TGG + chr2_4:9809869-9809888 None:intergenic 45.0%
ATGAGTCTGGGAATCCTATC+TGG - chr2_4:9810003-9810022 Msa0314170:CDS 45.0%
AGTGGAAAGTTGGAAGGAGA+AGG - chr2_4:9810034-9810053 Msa0314170:CDS 45.0%
!! AAAAAGGAAGCACCTAAGGC+TGG - chr2_4:9810074-9810093 Msa0314170:CDS 45.0%
ATCTGCTGTTCATGTGGAAC+TGG + chr2_4:9810110-9810129 None:intergenic 45.0%
AGTTCCACATGAACAGCAGA+TGG - chr2_4:9810109-9810128 Msa0314170:intron 45.0%
TCATCCATCTGCTGTTCATG+TGG + chr2_4:9810116-9810135 None:intergenic 45.0%
!!! ATAGGGTTGCTTTTACGGAC+AGG - chr2_4:9810721-9810740 Msa0314170:intron 45.0%
CCTCTCTTTCAAACCTGACA+TGG + chr2_4:9810918-9810937 None:intergenic 45.0%
CCATGTCAGGTTTGAAAGAG+AGG - chr2_4:9810915-9810934 Msa0314170:CDS 45.0%
ATCAACGGCGGTTCTTTCAA+CGG + chr2_4:9810991-9811010 None:intergenic 45.0%
AGTTCTTTCTATCCTTGCCG+TGG - chr2_4:9811023-9811042 Msa0314170:CDS 45.0%
GCTGACATTTGAATCCCTTG+TGG - chr2_4:9811098-9811117 Msa0314170:intron 45.0%
AAAGTCAGCTGTCTCCACAA+GGG + chr2_4:9811115-9811134 None:intergenic 45.0%
! CAGCTGACTTTGCAAGAAAG+TGG - chr2_4:9811124-9811143 Msa0314170:intron 45.0%
AAGTAAAACTCAGGTGCACG+TGG + chr2_4:9811180-9811199 None:intergenic 45.0%
GCTCAGAAAACACCAGATGA+AGG - chr2_4:9811563-9811582 Msa0314170:CDS 45.0%
AGAAAACACCAGATGAAGGG+TGG - chr2_4:9811567-9811586 Msa0314170:CDS 45.0%
CTATGCAAGATGGAACCTCT+TGG - chr2_4:9811591-9811610 Msa0314170:CDS 45.0%
TGGTCGCGTGAATTATTTCC+TGG + chr2_4:9811617-9811636 None:intergenic 45.0%
AATAATTCACGCGACCATCC+TGG - chr2_4:9811620-9811639 Msa0314170:CDS 45.0%
ATACCTGAATCATGCCAGGA+TGG + chr2_4:9811637-9811656 None:intergenic 45.0%
AGGAAACGAACTTCCAAGGT+TGG - chr2_4:9811919-9811938 Msa0314170:CDS 45.0%
CTGGAAACATAGACCAACCT+TGG + chr2_4:9811935-9811954 None:intergenic 45.0%
TACCAACACCACAAAAAGGC+TGG - chr2_4:9811971-9811990 Msa0314170:CDS 45.0%
! TTTCAGCACCAGCCTTTTTG+TGG + chr2_4:9811982-9812001 None:intergenic 45.0%
CAGTTCCCCCAAAGATTTGA+TGG - chr2_4:9812237-9812256 Msa0314170:intron 45.0%
GTAGTGATCGATATGCCAAC+CGG - chr2_4:9812268-9812287 Msa0314170:intron 45.0%
GAAGAAAACTGTGTTCCGGT+TGG + chr2_4:9812286-9812305 None:intergenic 45.0%
AAAGGACTTGACGGCATTCA+AGG - chr2_4:9812443-9812462 Msa0314170:CDS 45.0%
!! TTTGGTAATGGGGGCATAGA+AGG + chr2_4:9812530-9812549 None:intergenic 45.0%
GCCATTCATGTAATCGGTTG+TGG - chr2_4:9812906-9812925 Msa0314170:intron 45.0%
GCCACAACCGATTACATGAA+TGG + chr2_4:9812910-9812929 None:intergenic 45.0%
GCTACGAAGAAAAGACAGCA+TGG - chr2_4:9812928-9812947 Msa0314170:intron 45.0%
AAAGACAGCATGGGGAAAAG+AGG - chr2_4:9812938-9812957 Msa0314170:intron 45.0%
TCAAGATGCAATGTCGTGGA+TGG - chr2_4:9813111-9813130 Msa0314170:CDS 45.0%
CCTTTGAATGCAGGCCTTAA+GGG + chr2_4:9813155-9813174 None:intergenic 45.0%
CCTTAAGGCCTGCATTCAAA+GGG - chr2_4:9813153-9813172 Msa0314170:intron 45.0%
GTTTGCACCAAGTTCTTCGA+TGG - chr2_4:9813201-9813220 Msa0314170:intron 45.0%
CCAGCAAATCCATACCAAAG+AGG + chr2_4:9813266-9813285 None:intergenic 45.0%
CCTCTTTGGTATGGATTTGC+TGG - chr2_4:9813263-9813282 Msa0314170:CDS 45.0%
!! CTTTGGTATGGATTTGCTGG+TGG - chr2_4:9813266-9813285 Msa0314170:CDS 45.0%
GGATGTGAAAGGGTAAACGA+TGG + chr2_4:9813330-9813349 None:intergenic 45.0%
ACAATAAGCAACGAGGGGAA+GGG + chr2_4:9813351-9813370 None:intergenic 45.0%
TACAATAAGCAACGAGGGGA+AGG + chr2_4:9813352-9813371 None:intergenic 45.0%
!! AACGAGCAGTTCTGGGTAAT+TGG - chr2_4:9813781-9813800 Msa0314170:intron 45.0%
!! CTGGGTAATTGGAGGTGTTT+CGG - chr2_4:9813792-9813811 Msa0314170:intron 45.0%
! GCTGCTGATGATGCAGAATT+TGG - chr2_4:9813892-9813911 Msa0314170:intron 45.0%
!! AACCTTGTTGGTGTTGTAGC+TGG - chr2_4:9813976-9813995 Msa0314170:intron 45.0%
ATCCAGCTACAACACCAACA+AGG + chr2_4:9813981-9814000 None:intergenic 45.0%
CCCATAAGACCCTTAAGGAA+TGG + chr2_4:9814093-9814112 None:intergenic 45.0%
! CAATGGTTGGAGTACGGTTT+TGG + chr2_4:9814119-9814138 None:intergenic 45.0%
!! AAAAAAAATTGAAATATTAT+TGG + chr2_4:9808681-9808700 None:intergenic 5.0%
AGATGTGGCAATCCCTATGC+TGG - chr2_4:9808989-9809008 Msa0314170:CDS 50.0%
TGGCAATCCCTATGCTGGTA+TGG - chr2_4:9808994-9809013 Msa0314170:CDS 50.0%
TGCACAGATCAGCACTTCTC+AGG - chr2_4:9809502-9809521 Msa0314170:intron 50.0%
ACTGTGTCAACAGTGGACAG+TGG - chr2_4:9809885-9809904 Msa0314170:CDS 50.0%
GGAGTCTCATTTCCAGCCTT+AGG + chr2_4:9810089-9810108 None:intergenic 50.0%
AGGGAACTGATCTAACACCC+AGG + chr2_4:9810685-9810704 None:intergenic 50.0%
! TGCTTTTACGGACAGGCTCT+CGG - chr2_4:9810728-9810747 Msa0314170:intron 50.0%
GTGTTAGCTGTGATCAACGG+CGG + chr2_4:9811003-9811022 None:intergenic 50.0%
CAAAGTCAGCTGTCTCCACA+AGG + chr2_4:9811116-9811135 None:intergenic 50.0%
TGCATAGTCCACCCTTCATC+TGG + chr2_4:9811578-9811597 None:intergenic 50.0%
!! GAAGGGTGGACTATGCAAGA+TGG - chr2_4:9811581-9811600 Msa0314170:CDS 50.0%
! CAGGTTTTCCTTGGACACAG+TGG - chr2_4:9811881-9811900 Msa0314170:intron 50.0%
AGTGGTGCTCACGACATAGA+AGG - chr2_4:9811899-9811918 Msa0314170:CDS 50.0%
GTTTCCAGAGAGAAAAGGCC+AGG - chr2_4:9811947-9811966 Msa0314170:CDS 50.0%
!! GTAACCTGGCCTTTTCTCTC+TGG + chr2_4:9811954-9811973 None:intergenic 50.0%
! CACCAGCCTTTTTGTGGTGT+TGG + chr2_4:9811976-9811995 None:intergenic 50.0%
CATCCAGTCCCCACATATAC+AGG + chr2_4:9812470-9812489 None:intergenic 50.0%
CTTTGGCAGGCTTCTTTGAG+CGG + chr2_4:9812574-9812593 None:intergenic 50.0%
!! AGCTCTGAGACATCTTTGGC+AGG + chr2_4:9812587-9812606 None:intergenic 50.0%
! TGGTGGTGTGTCTGAATCTG+CGG - chr2_4:9812860-9812879 Msa0314170:intron 50.0%
GGATCCCTCAATGCTGATCA+AGG - chr2_4:9812881-9812900 Msa0314170:intron 50.0%
TCCCTCAATGCTGATCAAGG+AGG - chr2_4:9812884-9812903 Msa0314170:intron 50.0%
! GCCTCCTTGATCAGCATTGA+GGG + chr2_4:9812888-9812907 None:intergenic 50.0%
CAGCATGGGGAAAAGAGGTT+AGG - chr2_4:9812943-9812962 Msa0314170:intron 50.0%
GGGTTCAAGATGCAATGTCG+TGG - chr2_4:9813107-9813126 Msa0314170:CDS 50.0%
AGATGCAATGTCGTGGATGG+AGG - chr2_4:9813114-9813133 Msa0314170:CDS 50.0%
CCCTTAAGGCCTGCATTCAA+AGG - chr2_4:9813152-9813171 Msa0314170:intron 50.0%
CCCTTTGAATGCAGGCCTTA+AGG + chr2_4:9813156-9813175 None:intergenic 50.0%
CAAGAGCCCATCGAAGAACT+TGG + chr2_4:9813211-9813230 None:intergenic 50.0%
! CAAGTTCTTCGATGGGCTCT+TGG - chr2_4:9813209-9813228 Msa0314170:intron 50.0%
! TCTGAAACTGCTGCAGAGAC+TGG - chr2_4:9813292-9813311 Msa0314170:intron 50.0%
CCTGTGAGTAGGCAAATTGC+AGG + chr2_4:9813380-9813399 None:intergenic 50.0%
CCTGCAATTTGCCTACTCAC+AGG - chr2_4:9813377-9813396 Msa0314170:intron 50.0%
TGACCAGTGTTCTTGAGCTG+AGG - chr2_4:9813725-9813744 Msa0314170:intron 50.0%
TATGGCGTAACGAGCAGTTC+TGG - chr2_4:9813773-9813792 Msa0314170:intron 50.0%
ATGGCGTAACGAGCAGTTCT+GGG - chr2_4:9813774-9813793 Msa0314170:intron 50.0%
!! GAGCAGTTCTGGGTAATTGG+AGG - chr2_4:9813784-9813803 Msa0314170:intron 50.0%
GAATCTTGGGGACCACTCAT+TGG - chr2_4:9814027-9814046 Msa0314170:intron 50.0%
GCAAACACTACGTCCCTCAC+TGG + chr2_4:9808966-9808985 None:intergenic 55.0%
GATCTGTGCAGCCGTTGTTG+TGG + chr2_4:9809492-9809511 None:intergenic 55.0%
AGGACGTTGGACTCCATGCT+AGG - chr2_4:9809853-9809872 Msa0314170:CDS 55.0%
! ATTTTGCAGGCCCTCCTCTG+AGG - chr2_4:9810470-9810489 Msa0314170:intron 55.0%
CAGGCTCTCGGCAAGGTAAT+TGG - chr2_4:9810740-9810759 Msa0314170:intron 55.0%
! ACCTTGTCAGCTTGCTCCTG+TGG - chr2_4:9810942-9810961 Msa0314170:CDS 55.0%
TCCACAGGAGCAAGCTGACA+AGG + chr2_4:9810946-9810965 None:intergenic 55.0%
CAAGATGGAACCTCTTGGCC+AGG - chr2_4:9811596-9811615 Msa0314170:CDS 55.0%
CGACCATCCTGGCATGATTC+AGG - chr2_4:9811631-9811650 Msa0314170:intron 55.0%
! GGCTGGTGCTGAAAATGCAC+TGG - chr2_4:9811988-9812007 Msa0314170:CDS 55.0%
GGACCTGTATATGTGGGGAC+TGG - chr2_4:9812464-9812483 Msa0314170:CDS 55.0%
!! GGTAATGGGGGCATAGAAGG+TGG + chr2_4:9812527-9812546 None:intergenic 55.0%
GGCCTCCTTGATCAGCATTG+AGG + chr2_4:9812889-9812908 None:intergenic 55.0%
CGAGGGGAAGGGATGTGAAA+GGG + chr2_4:9813340-9813359 None:intergenic 55.0%
ACGAGGGGAAGGGATGTGAA+AGG + chr2_4:9813341-9813360 None:intergenic 55.0%
CCACCTCAGCTCAAGAACAC+TGG + chr2_4:9813731-9813750 None:intergenic 55.0%
CCAGTGTTCTTGAGCTGAGG+TGG - chr2_4:9813728-9813747 Msa0314170:intron 55.0%
GTTCTTGAGCTGAGGTGGAG+CGG - chr2_4:9813733-9813752 Msa0314170:intron 55.0%
GGCGACCCATAAGACCCTTA+AGG + chr2_4:9814098-9814117 None:intergenic 55.0%
TTACGGACAGGCTCTCGGCA+AGG - chr2_4:9810733-9810752 Msa0314170:intron 60.0%
CCACAGGATAGTCCACGGCA+AGG + chr2_4:9811038-9811057 None:intergenic 60.0%
! CCTTGCCGTGGACTATCCTG+TGG - chr2_4:9811035-9811054 Msa0314170:CDS 60.0%
CGTGAGCACCACTGTGTCCA+AGG + chr2_4:9811892-9811911 None:intergenic 60.0%
!! GGCGCTGACCCTTTGAATGC+AGG + chr2_4:9813164-9813183 None:intergenic 60.0%
GCAGCTGCAGCCTCAGAGGA+GGG + chr2_4:9810483-9810502 None:intergenic 65.0%
AGCAGCTGCAGCCTCAGAGG+AGG + chr2_4:9810484-9810503 None:intergenic 65.0%
CTCAGCAGCTGCAGCCTCAG+AGG + chr2_4:9810487-9810506 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 9808535 9814623 9808535 ID=Msa0314170;Name=Msa0314170
chr2_4 mRNA 9808535 9814623 9808535 ID=Msa0314170-mRNA-1;Parent=Msa0314170;Name=Msa0314170-mRNA-1;_AED=0.08;_eAED=0.08;_QI=298|1|1|1|1|1|13|363|977
chr2_4 exon 9808535 9809485 9808535 ID=Msa0314170-mRNA-1:exon:3815;Parent=Msa0314170-mRNA-1
chr2_4 exon 9809740 9810093 9809740 ID=Msa0314170-mRNA-1:exon:3814;Parent=Msa0314170-mRNA-1
chr2_4 exon 9810199 9810398 9810199 ID=Msa0314170-mRNA-1:exon:3813;Parent=Msa0314170-mRNA-1
chr2_4 exon 9810490 9810724 9810490 ID=Msa0314170-mRNA-1:exon:3812;Parent=Msa0314170-mRNA-1
chr2_4 exon 9810850 9811062 9810850 ID=Msa0314170-mRNA-1:exon:3811;Parent=Msa0314170-mRNA-1
chr2_4 exon 9811149 9811274 9811149 ID=Msa0314170-mRNA-1:exon:3810;Parent=Msa0314170-mRNA-1
chr2_4 exon 9811506 9811643 9811506 ID=Msa0314170-mRNA-1:exon:3809;Parent=Msa0314170-mRNA-1
chr2_4 exon 9811889 9812234 9811889 ID=Msa0314170-mRNA-1:exon:3808;Parent=Msa0314170-mRNA-1
chr2_4 exon 9812404 9812679 9812404 ID=Msa0314170-mRNA-1:exon:3807;Parent=Msa0314170-mRNA-1
chr2_4 exon 9813017 9813164 9813017 ID=Msa0314170-mRNA-1:exon:3806;Parent=Msa0314170-mRNA-1
chr2_4 exon 9813252 9813303 9813252 ID=Msa0314170-mRNA-1:exon:3805;Parent=Msa0314170-mRNA-1
chr2_4 exon 9813635 9813714 9813635 ID=Msa0314170-mRNA-1:exon:3804;Parent=Msa0314170-mRNA-1
chr2_4 exon 9814148 9814623 9814148 ID=Msa0314170-mRNA-1:exon:3803;Parent=Msa0314170-mRNA-1
chr2_4 five_prime_UTR 9814326 9814623 9814326 ID=Msa0314170-mRNA-1:five_prime_utr;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9814148 9814325 9814148 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9813635 9813714 9813635 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9813252 9813303 9813252 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9813017 9813164 9813017 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9812404 9812679 9812404 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9811889 9812234 9811889 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9811506 9811643 9811506 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9811149 9811274 9811149 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9810850 9811062 9810850 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9810490 9810724 9810490 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9810199 9810398 9810199 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9809740 9810093 9809740 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 CDS 9808898 9809485 9808898 ID=Msa0314170-mRNA-1:cds;Parent=Msa0314170-mRNA-1
chr2_4 three_prime_UTR 9808535 9808897 9808535 ID=Msa0314170-mRNA-1:three_prime_utr;Parent=Msa0314170-mRNA-1
Gene Sequence

>Msa0314170

ATGATGGAATCAGGAGTTAGCTTTTGTAACTCTTGTGGTGAACAAGTTGGAGTTGATGCTAATGGAGAGGTGTTTGTGGCTTGTCATGAGTGTTATTTCCCAATTTGTAAGGCTTGTGTTGATTATGAGACCAGTGAGGGACGTAGTGTTTGCTTGAGATGTGGCAATCCCTATGCTGATAGAACAAGAGGTAAGGATGACACCAAAGTTCCTGCAAATCAATCCACAACAACGGCTGCACAGATCAGCACTTCTCAGGACGTTGGACTCCATGCTAGGCATATCAGTACTGTGTCAACAGTGGACAGTGAATTAAATGATGAGTCTGGGAATCCTATCTGGAAAAATAGAGTGGAAAGTTGGAAGGAGAAGGACAAAAAAAAAAAGAAGAAAAAGGAAGCACCTAAGGCTGGAAATGAGACTCCAGTTCCACATGAACAGCAGATGGATGAAATGCAGCCCTCCTCTGAGGCTGCAGCTGCTGAGCCACTTTCAGTGATAATTCCAGTCTCAAAATCGAAACTTGGACCATACAGAACTGTTATAATCATGCGGCTCGTAATATTGGGTCTGTTTTTCCATTATAGAGTTACACATCCAGTTGATAGTGCTTTTGGTCTGTGGTTGACATCTATCATCTGTGAGATCTGGTTTGCTTTTTCCTGGGTGTTAGATCAGTTCCCTAAATGGTCTCCTATCAATAGGGTTGCTTTTACGGACAGGCTCTCGGCAAGGTTTGAAAGAGAGGGTGAACCTTGTCAGCTTGCTCCTGTGGATTTCTTTGTCAGTACAGTTGATCCGTTGAAAGAACCGCCGTTGATCACAGCTAACACAGTTCTTTCTATCCTTGCCGTGGACTATCCTGTGGAAAAAGTATCATGTTATGTTTCAGATGATGGTGCTGCAATGCTGACATTTGAATCCCTTGTGGAGACAGCTGACTTTGCAAGAAAGTGGGTTCCATTTTGCAAAAAGTTTGAGATTGAACCACGTGCACCTGAGTTTTACTTCTCTCAGAAGATTGACTATTTGAAGGACAAAGTTCAACCTTCTTTTGTGAAGGAACGTAGAGCAATGAAAAGAGAATATGAAGAGTATAAAGTCAGAGTTAATGCTTTGGTAGCTAAGGCTCAGAAAACACCAGATGAAGGGTGGACTATGCAAGATGGAACCTCTTGGCCAGGAAATAATTCACGCGACCATCCTGGCATGATTCAGGTTTTCCTTGGACACAGTGGTGCTCACGACATAGAAGGAAACGAACTTCCAAGGTTGGTCTATGTTTCCAGAGAGAAAAGGCCAGGTTACCAACACCACAAAAAGGCTGGTGCTGAAAATGCACTGGTGAGAGTGTCTGCAGTTCTCACAAACGCTCCCTACATTCTCAATCTTGACTGTGATCATTATGTTAACAATAGCAAGGCTGTTCGAGAAGCGATGTGTTTTCTGATGGATCCAGTAGTTGGTAGAGATGTTTGTTATGTGCAGTTCCCCCAAAGATTTGATGGTATTGATCGTAGTGATCGATATGCCAACCGGAACACAGTTTTCTTCGATGTTAATATGAAAGGACTTGACGGCATTCAAGGACCTGTATATGTGGGGACTGGATGTGTTTTCAATCGACAAGCGCTTTATGGATACAGTCCACCTTCTATGCCCCCATTACCAAAATCTTCATCTTGTTGTTGCTTCCGCTCAAAGAAGCCTGCCAAAGATGTCTCAGAGCTTTATAAAGATGCAAAGAGGGAAGAGCTTGATGCTGCTATTTTTAATCTCAGGGAGATTGAGAACTATGATGAGTATGAGAGGTCAATGCTTATTTCACAACTTAGCTTTGAAAAAACATTTGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAATGGTGGTGTGTCTGAATCTGCGGATCCCTCAATGCTGATCAAGGAGGCCATTCATGTAATCGGTTGTGGCTACGAAGAAAAGACAGCATGGGGAAAAGAGATTGGTTGGATATATGGTTCAGTGACTGAGGATATCTTAACGGGGTTCAAGATGCAATGTCGTGGATGGAGGTCAATTTATTGCATGCCCTTAAGGCCTGCATTCAAAGGGTCAGCGCCAATCAATCTTTCCGATCGTTTGCACCAAGTTCTTCGATGGGCTCTTGGATCAGTTGAAATTTTCCTTAGTAGACATTGTCCTCTTTGGTATGGATTTGCTGGTGGTCGTCTGAAACTGCTGCAGAGACTGGCTTATATAAACACCATCGTTTACCCTTTCACATCCCTTCCCCTCGTTGCTTATTGTACTTTGCCTGCAATTTGCCTACTCACAGGAAAATTCATCATACCAACGCTATCAAACATTGCAAGTGCACTTTTTCTTGGACTTTTCATCTCTATTATATTGACCAGTGTTCTTGAGCTGAGGTGGAGCGGTGTTACCATAGAAGATTTATGGCGTAACGAGCAGTTCTGGGTAATTGGAGGTGTTTCGGCTCATCTTTTTGCTGTCTTCCAAGGATTCCTAAAGATGTTAGCAGGTGTTGACACAAACTTCACTGTGACAGCAAAAGCTGCTGATGATGCAGAATTTGGTGAACTATATATGATCAAATGGACAACACTCTTAATTCCTCCAACAAGTCTTATCATTATTAACCTTGTTGGTGTTGTAGCTGGATTTTCTGATGCACTTAATGGTGGATATGAATCTTGGGGACCACTCATTGGAAAAGTTTTCTTCGCATTTTGGGTGATTTTTCATCTTTATCCATTCCTTAAGGGTCTTATGGGTCGCCAAAACCGTACTCCAACCATTGTTATTCTTTGGTCAGTGCTTTTGGCTTCTGTCTTCTCACTTGTTTGGGTTAAGATTAATCCATTTGTGAGCAAAGTTGATAGTTCAGCTATTTCTCAGACTTGTATTTCTATTGATTGTTAA
Protein sequence

>Msa0314170

MMESGVSFCNSCGEQVGVDANGEVFVACHECYFPICKACVDYETSEGRSVCLRCGNPYADRTRGKDDTKVPANQSTTTAAQISTSQDVGLHARHISTVSTVDSELNDESGNPIWKNRVESWKEKDKKKKKKKEAPKAGNETPVPHEQQMDEMQPSSEAAAAEPLSVIIPVSKSKLGPYRTVIIMRLVILGLFFHYRVTHPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWSPINRVAFTDRLSARFEREGEPCQLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFEIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKREYEEYKVRVNALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGHSGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYSPPSMPPLPKSSSCCCFRSKKPAKDVSELYKDAKREELDAAIFNLREIENYDEYERSMLISQLSFEKTFGLSTVFIESTLMENGGVSESADPSMLIKEAIHVIGCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNIASALFLGLFISIILTSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMIKWTTLLIPPTSLIIINLVGVVAGFSDALNGGYESWGPLIGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFVSKVDSSAISQTCISIDC*