AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0274440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0274440 MtrunA17_Chr2g0284211 99.387 979 4 1 1 977 1 979 0.0 2019
Msa0274440 MtrunA17_Chr8g0379241 81.864 998 153 8 1 977 1 991 0.0 1652
Msa0274440 MtrunA17_Chr2g0296991 65.098 1020 293 14 3 970 31 1039 0.0 1325
Msa0274440 MtrunA17_Chr4g0073711 63.221 1006 303 8 9 963 37 1026 0.0 1311
Msa0274440 MtrunA17_Chr3g0088821 66.631 929 280 12 75 977 154 1078 0.0 1263
Msa0274440 MtrunA17_Chr3g0137951 66.810 931 281 13 70 977 162 1087 0.0 1261
Msa0274440 MtrunA17_Chr8g0383701 67.010 873 259 8 110 962 220 1083 0.0 1243
Msa0274440 MtrunA17_Chr8g0352231 67.861 893 263 11 101 977 194 1078 0.0 1233
Msa0274440 MtrunA17_Chr1g0201731 67.281 868 262 6 110 964 228 1086 0.0 1233
Msa0274440 MtrunA17_Chr1g0183381 66.994 815 250 5 158 970 102 899 0.0 1169
Msa0274440 MtrunA17_Chr3g0078671 55.294 1020 396 10 9 977 39 1049 0.0 1157
Msa0274440 MtrunA17_Chr7g0267731 64.834 873 279 7 110 963 111 974 0.0 1152
Msa0274440 MtrunA17_Chr8g0364641 54.359 975 405 14 9 974 37 980 0.0 1122
Msa0274440 MtrunA17_Chr4g0039801 45.437 1030 446 21 12 958 132 1128 0.0 858
Msa0274440 MtrunA17_Chr5g0410641 44.104 1043 446 18 10 958 108 1107 0.0 848
Msa0274440 MtrunA17_Chr7g0269741 48.594 889 359 16 151 958 285 1156 0.0 817
Msa0274440 MtrunA17_Chr1g0165411 43.398 1030 447 21 7 958 118 1089 0.0 808
Msa0274440 MtrunA17_Chr1g0165421 43.528 1043 466 20 7 967 125 1126 0.0 803
Msa0274440 MtrunA17_Chr2g0297351 46.871 879 359 16 162 958 158 1010 0.0 782
Msa0274440 MtrunA17_Chr7g0274751 42.353 850 307 17 162 966 95 806 0.0 607
Msa0274440 MtrunA17_Chr2g0322361 33.771 761 413 15 208 949 52 740 6.53e-130 410
Msa0274440 MtrunA17_Chr3g0102531 34.588 691 359 14 178 859 21 627 1.02e-128 406
Msa0274440 MtrunA17_Chr2g0322371 33.595 765 410 17 208 954 47 731 4.75e-127 402
Msa0274440 MtrunA17_Chr3g0102541 34.421 674 350 13 195 859 38 628 3.91e-125 397
Msa0274440 MtrunA17_Chr4g0046401 32.579 795 442 17 170 949 15 730 9.31e-125 396
Msa0274440 MtrunA17_Chr2g0322351 34.383 762 422 18 195 949 37 727 8.27e-124 394
Msa0274440 MtrunA17_Chr1g0186381 31.158 812 449 17 155 944 2 725 4.06e-120 384
Msa0274440 MtrunA17_Chr4g0025201 32.710 749 415 17 195 928 37 711 1.88e-118 380
Msa0274440 MtrunA17_Chr3g0095791 28.794 771 447 14 172 933 12 689 1.07e-106 347
Msa0274440 MtrunA17_Chr2g0307191 29.188 764 442 13 179 934 19 691 3.59e-104 340
Msa0274440 MtrunA17_Chr2g0298581 29.528 762 440 14 179 933 19 690 5.81e-103 337
Msa0274440 MtrunA17_Chr3g0077511 27.451 765 456 12 179 934 19 693 1.96e-95 317
Msa0274440 MtrunA17_Chr3g0102551 39.552 402 208 10 166 547 7 393 1.84e-88 299
Msa0274440 MtrunA17_Chr3g0102551 30.719 306 195 7 653 946 429 729 8.34e-35 142
Msa0274440 MtrunA17_Chr2g0322341 42.006 319 171 6 195 513 39 343 1.08e-77 258
Msa0274440 MtrunA17_Chr2g0322331 30.163 368 241 7 594 949 8 371 6.96e-48 175
Msa0274440 MtrunA17_Chr3g0126641 44.240 217 90 5 489 686 6 210 1.33e-45 163
Msa0274440 MtrunA17_Chr0c03g0490021 63.934 122 43 1 806 926 1 122 9.46e-44 155
Msa0274440 MtrunA17_Chr2g0307241 33.163 196 111 3 179 374 19 194 5.00e-29 115
Msa0274440 MtrunA17_Chr7g0252781 60.000 85 33 1 893 977 6 89 3.21e-27 106
Msa0274440 MtrunA17_Chr8g0355061 77.778 54 12 0 806 859 1 54 2.53e-24 96.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0274440 AT4G18780.1 82.132 985 168 3 1 977 1 985 0.0 1674
Msa0274440 AT5G44030.1 63.163 1037 304 13 9 977 23 1049 0.0 1320
Msa0274440 AT5G17420.1 63.101 1019 297 11 7 974 35 1025 0.0 1311
Msa0274440 AT5G44030.2 61.568 1059 314 10 9 977 23 1078 0.0 1311
Msa0274440 AT5G05170.1 61.392 1049 318 14 9 974 20 1064 0.0 1292
Msa0274440 AT2G25540.1 61.667 1020 318 15 9 961 33 1046 0.0 1289
Msa0274440 AT4G32410.1 61.725 1032 310 13 9 960 39 1065 0.0 1286
Msa0274440 AT5G64740.1 57.696 1059 344 12 9 977 39 1083 0.0 1253
Msa0274440 AT2G21770.1 66.104 888 268 10 110 977 212 1086 0.0 1235
Msa0274440 AT5G09870.1 64.892 883 280 9 110 977 201 1068 0.0 1224
Msa0274440 AT4G39350.1 66.282 866 276 5 110 962 208 1070 0.0 1204
Msa0274440 AT5G44030.3 72.021 772 174 6 245 977 2 770 0.0 1159
Msa0274440 AT5G16910.1 44.831 1035 447 21 12 958 133 1131 0.0 836
Msa0274440 AT3G03050.1 44.306 1045 436 21 12 958 135 1131 0.0 834
Msa0274440 AT1G02730.1 44.553 1019 460 19 30 964 177 1174 0.0 814
Msa0274440 AT4G38190.1 43.520 1034 438 22 11 958 119 1092 0.0 806
Msa0274440 AT2G33100.2 47.026 891 368 16 162 969 166 1035 0.0 795
Msa0274440 AT2G33100.1 47.026 891 368 16 162 969 166 1035 0.0 795
Msa0274440 AT1G32180.1 47.586 870 369 16 164 956 107 966 0.0 784
Msa0274440 AT1G32180.2 47.586 870 369 16 164 956 107 966 0.0 784
Msa0274440 AT2G32530.1 33.043 805 416 24 183 949 24 743 1.41e-118 380
Msa0274440 AT2G32610.1 32.120 797 437 23 186 949 27 752 4.06e-118 379
Msa0274440 AT2G32540.1 32.010 781 421 18 207 954 50 753 4.95e-116 374
Msa0274440 AT2G32620.1 32.979 752 405 17 207 930 50 730 1.92e-115 372
Msa0274440 AT4G15320.3 32.950 783 415 22 179 927 23 729 8.09e-114 368
Msa0274440 AT4G15320.5 32.950 783 415 22 179 927 23 729 1.20e-113 367
Msa0274440 AT4G15320.4 32.456 798 414 23 179 927 23 744 1.17e-109 357
Msa0274440 AT2G32620.3 36.034 580 302 12 207 781 50 565 1.01e-108 350
Msa0274440 AT4G15290.1 32.357 751 409 20 206 928 49 728 4.72e-107 350
Msa0274440 AT2G32620.4 33.143 700 371 17 261 930 2 634 6.40e-104 339
Msa0274440 AT4G15320.2 32.297 740 359 20 179 863 23 675 5.45e-102 337
Msa0274440 AT2G32620.2 35.379 554 287 11 207 755 50 537 1.78e-99 323
Msa0274440 AT4G15320.1 30.612 784 357 22 179 863 23 718 1.12e-93 316
Msa0274440 AT1G55850.1 40.547 402 219 8 150 547 6 391 1.26e-84 288
Msa0274440 AT1G55850.1 31.098 328 197 9 634 946 406 719 3.71e-34 141
Msa0274440 AT4G24010.1 39.594 394 204 11 177 558 25 396 1.50e-78 272
Msa0274440 AT4G24010.1 34.831 267 166 2 647 907 419 683 5.16e-40 159
Msa0274440 AT4G24000.1 37.330 442 235 15 152 581 1 412 2.71e-76 265
Msa0274440 AT4G24000.1 30.539 334 214 6 629 950 387 714 1.63e-40 160
Msa0274440 AT4G23990.1 37.949 390 216 8 177 558 44 415 5.10e-74 259
Msa0274440 AT4G23990.1 32.258 310 196 4 628 930 419 721 1.61e-41 164
Msa0274440 AT4G23990.2 32.258 310 196 4 628 930 205 507 1.23e-41 161
Msa0274440 AT4G23990.2 42.857 203 105 5 363 558 3 201 3.44e-38 151
Msa0274440 AT4G24000.2 42.544 228 112 8 363 581 3 220 1.80e-41 160
Msa0274440 AT4G24000.2 32.740 281 178 3 643 917 213 488 7.39e-41 159

Find 243 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCGACAAGCGCTTTA+TGG 0.152250 2_3:+6265103 Msa0274440:CDS
TCCATTCCTTAAGGGTCTTA+TGG 0.193420 2_3:+6266686 Msa0274440:CDS
GTTAAGGGTCATAGAGTTTA+TGG 0.197162 2_3:+6261503 Msa0274440:five_prime_UTR
TCAACACAAGCCTTACAAAT+TGG 0.207367 2_3:-6261650 None:intergenic
ATCTATAACCAGTCAATTAT+TGG 0.214723 2_3:-6267061 None:intergenic
CTTCTGTCTTCTCACTTGTT+TGG 0.216156 2_3:+6266760 Msa0274440:CDS
AATCATGCGGCTCGTAATAT+TGG 0.216166 2_3:+6263175 Msa0274440:CDS
CAACAGCAAGATGAAGATTT+TGG 0.228499 2_3:-6265154 None:intergenic
TTTGATCATATGTTATGATA+TGG 0.240907 2_3:+6266892 Msa0274440:three_prime_UTR
TATTCTTTGGTCAGTGCTTT+TGG 0.244414 2_3:+6266737 Msa0274440:CDS
GTGTTACCATAGAAGATTTA+TGG 0.252451 2_3:+6266352 Msa0274440:CDS
TTCTGTCTTCTCACTTGTTT+GGG 0.253330 2_3:+6266761 Msa0274440:CDS
CTCCAACCATTGTTATTCTT+TGG 0.254720 2_3:+6266724 Msa0274440:CDS
CCTCTTTGGTATGGATTTGC+TGG 0.259446 2_3:+6265872 Msa0274440:CDS
GAGTATAGTTTGAGAAGTTA+AGG 0.269367 2_3:+6261487 Msa0274440:five_prime_UTR
CATCCAGTTGATAGTGCTTT+TGG 0.274318 2_3:+6263224 Msa0274440:CDS
CAATGGTTGGAGTACGGTTT+TGG 0.275754 2_3:-6266713 None:intergenic
GATCAATACCATCAAATCTT+TGG 0.280002 2_3:-6264854 None:intergenic
TATGGCGTAACGAGCAGTTC+TGG 0.280519 2_3:+6266370 Msa0274440:CDS
ATTCAGATTGGTTGGATATA+TGG 0.285850 2_3:+6265668 Msa0274440:intron
TTAGTAGACATTGTCCTCTT+TGG 0.288789 2_3:+6265858 Msa0274440:CDS
CTATTGATAGGAGACCATTT+AGG 0.297079 2_3:-6263311 None:intergenic
AACGAGCAGTTCTGGGTAAT+TGG 0.298572 2_3:+6266378 Msa0274440:CDS
CCATTCCTTAAGGGTCTTAT+GGG 0.301598 2_3:+6266687 Msa0274440:CDS
CCCTTTGAACGCAGGCCTTA+AGG 0.305415 2_3:-6265762 None:intergenic
ATCAATACCATCAAATCTTT+GGG 0.308914 2_3:-6264853 None:intergenic
TCATCTTTATCCATTCCTTA+AGG 0.313408 2_3:+6266677 Msa0274440:CDS
CAACACCTGCTAACATCTTT+AGG 0.317097 2_3:-6266440 None:intergenic
CGACCATCCTGGCATGATTC+AGG 0.317609 2_3:+6264240 Msa0274440:CDS
TTTCATTGAATCTACACTAA+TGG 0.318286 2_3:+6265442 Msa0274440:CDS
CATCTTTATCCATTCCTTAA+GGG 0.318968 2_3:+6266678 Msa0274440:CDS
CTGGATGTGTAACTCTATAA+TGG 0.320127 2_3:-6263208 None:intergenic
GTAGAATTAAATGATGAGTC+TGG 0.321242 2_3:+6262586 Msa0274440:intron
CTAAATGGTCTCCTATCAAT+AGG 0.324805 2_3:+6263312 Msa0274440:CDS
ATAAAGCTCTGAGACATCTT+TGG 0.326451 2_3:-6265197 None:intergenic
CTTATCATTATTAACCTTGT+TGG 0.328983 2_3:+6266561 Msa0274440:CDS
TCCAACTAATTCTTCCCTTA+AGG 0.333169 2_3:+6261419 Msa0274440:five_prime_UTR
ATGAGTCTGGGAATCCTATC+TGG 0.333861 2_3:+6262599 Msa0274440:CDS
TATTGATAGGAGACCATTTA+GGG 0.334357 2_3:-6263310 None:intergenic
CCTTTGAACGCAGGCCTTAA+GGG 0.336888 2_3:-6265761 None:intergenic
GCTGCTGATGATGCAGAATT+TGG 0.338469 2_3:+6266489 Msa0274440:CDS
CAATTTACTGCATGCCCTTA+AGG 0.340923 2_3:+6265747 Msa0274440:CDS
TGTTAGATCAGTTCCCTAAA+TGG 0.342957 2_3:+6263297 Msa0274440:CDS
CAAGTTCTTCGATGGGCTCT+TGG 0.344057 2_3:+6265818 Msa0274440:CDS
CTGGGTAATTGGAGGTGTTT+CGG 0.353068 2_3:+6266389 Msa0274440:CDS
TGGTCGCGTGAATTATTTCC+TGG 0.359437 2_3:-6264223 None:intergenic
GTTGTTGTGGATTGATTTGC+AGG 0.367203 2_3:-6262067 None:intergenic
GTTACGCCATAAATCTTCTA+TGG 0.368229 2_3:-6266358 None:intergenic
GTCAATGAAGCAATCCTTAA+GGG 0.371344 2_3:-6261433 None:intergenic
TTTGTTTATGTCAAACTTCA+AGG 0.375521 2_3:-6261527 None:intergenic
AGTATAGTTTGAGAAGTTAA+GGG 0.375942 2_3:+6261488 Msa0274440:five_prime_UTR
CTATCAACTTTGCTCACAAA+TGG 0.379764 2_3:-6266795 None:intergenic
CAAGGTAGATAACATGAGTA+TGG 0.387523 2_3:-6267161 None:intergenic
AGGTTACCAACACCACAAAA+AGG 0.388733 2_3:+6264576 Msa0274440:CDS
CCTGTGAGTAGGCAAATTGC+AGG 0.391040 2_3:-6265986 None:intergenic
TGGTGAAGGTGATTGTAGTA+TGG 0.392162 2_3:-6261377 None:intergenic
TTAATAATGATAAGACTTGT+TGG 0.397569 2_3:-6266552 None:intergenic
CTAACATCTTTAGGAATCCT+TGG 0.400962 2_3:-6266431 None:intergenic
TCAGAAGATTGACTATTTGA+AGG 0.405314 2_3:+6263812 Msa0274440:CDS
TGCATAGTCCACCCTTCATC+TGG 0.405419 2_3:-6264184 None:intergenic
AGCAGCTGCAGCCTCAGAGG+AGG 0.406357 2_3:-6263090 None:intergenic
ATCTGCTGTTCATGTGGAAC+TGG 0.406720 2_3:-6262703 None:intergenic
TAATGGTGGATATGAATCTT+GGG 0.406813 2_3:+6266611 Msa0274440:CDS
GTGACTGAGGATATCTTAAC+GGG 0.408774 2_3:+6265695 Msa0274440:CDS
AGTCAATGAAGCAATCCTTA+AGG 0.413983 2_3:-6261434 None:intergenic
CAACACAAGCCTTACAAATT+GGG 0.414895 2_3:-6261649 None:intergenic
AACCTTGTTGGTGTTGTAGC+TGG 0.415993 2_3:+6266573 Msa0274440:CDS
ATCATGCGGCTCGTAATATT+GGG 0.418633 2_3:+6263176 Msa0274440:CDS
CAAACATCTCTACCGACTAC+TGG 0.423618 2_3:-6264816 None:intergenic
TCTGAAACTGCTGCAGAGAC+TGG 0.423797 2_3:+6265901 Msa0274440:CDS
CATCTATCATCTGTGAGATC+TGG 0.425614 2_3:+6263258 Msa0274440:CDS
GTGTTATTTCCCAATTTGTA+AGG 0.426117 2_3:+6261640 Msa0274440:CDS
TTAATGGTGGATATGAATCT+TGG 0.430333 2_3:+6266610 Msa0274440:CDS
AGACATTGTCCTCTTTGGTA+TGG 0.435333 2_3:+6265863 Msa0274440:CDS
TCCTTAAGGGAAGAATTAGT+TGG 0.438851 2_3:-6261420 None:intergenic
GAATCTTGGGGACCACTCAT+TGG 0.440256 2_3:+6266624 Msa0274440:CDS
GCCTCCTTGATCAGCATTGA+GGG 0.442247 2_3:-6265494 None:intergenic
CCAGTCTCAAAATCGAAACT+TGG 0.446012 2_3:+6263134 Msa0274440:CDS
GGCGACCCATAAGACCCTTA+AGG 0.446918 2_3:-6266692 None:intergenic
TACAATAAGCAACGAGGGGA+AGG 0.448543 2_3:-6265958 None:intergenic
CTACGTTCCTTCACAAAAGA+AGG 0.451548 2_3:-6263846 None:intergenic
GGAGTCTCATTTCCAGCCTT+AGG 0.452035 2_3:-6262682 None:intergenic
GTGAACTATATATGATCAAA+TGG 0.460410 2_3:+6266511 Msa0274440:CDS
CCCTTAAGGCCTGCGTTCAA+AGG 0.461778 2_3:+6265761 Msa0274440:CDS
AAGGAGGCCATTCATGTAAT+CGG 0.462285 2_3:+6265509 Msa0274440:CDS
CTCAGCAGCTGCAGCCTCAG+AGG 0.463990 2_3:-6263093 None:intergenic
TGCTAATGGAGAGGTGTTTG+TGG 0.464871 2_3:+6261607 Msa0274440:CDS
AGACCAAAAGCACTATCAAC+TGG 0.467986 2_3:-6263227 None:intergenic
CATCCAGTCCCCACATATAC+AGG 0.468316 2_3:-6265076 None:intergenic
AAAGGACTTGACGGCATTCA+AGG 0.471693 2_3:+6265052 Msa0274440:CDS
GTAAAAGCAACCCTATTGAT+AGG 0.471729 2_3:-6263323 None:intergenic
TGCACAGATCAGCACTTCTC+AGG 0.471880 2_3:+6262093 Msa0274440:CDS
ATAACATATGATCAAAACTT+TGG 0.473160 2_3:-6266885 None:intergenic
ATGGCGTAACGAGCAGTTCT+GGG 0.474093 2_3:+6266371 Msa0274440:CDS
CAAGTTGGAGTTGATGCTAA+TGG 0.475260 2_3:+6261593 Msa0274440:CDS
ATCAACGGCGGTTCTTTCAA+CGG 0.476719 2_3:-6263597 None:intergenic
ACCTTGTCAGCTTGCTCCTG+TGG 0.476795 2_3:+6263551 Msa0274440:CDS
TATTGTGTATTCAGATTGGT+TGG 0.477209 2_3:+6265660 Msa0274440:intron
CAGCTGACTTTGCAAGAAAG+TGG 0.477475 2_3:+6263733 Msa0274440:CDS
GTTTGCACCAAGTTCTTCGA+TGG 0.479288 2_3:+6265810 Msa0274440:CDS
AGTGGTGCTCACGACATAGA+AGG 0.480957 2_3:+6264508 Msa0274440:CDS
CAAGAGCCCATCGAAGAACT+TGG 0.484396 2_3:-6265817 None:intergenic
TAGAATTAAATGATGAGTCT+GGG 0.484813 2_3:+6262587 Msa0274440:intron
ACTTTGGCAAGCACAATTGT+TGG 0.485186 2_3:-6266869 None:intergenic
GCCATTCATGTAATCGGTTG+TGG 0.485828 2_3:+6265515 Msa0274440:CDS
CATCGAAGAAAACTGTGTTC+CGG 0.486357 2_3:-6264896 None:intergenic
TAAATGGTCTCCTATCAATA+GGG 0.487621 2_3:+6263313 Msa0274440:CDS
AAACGATCGGAAAGATTGAT+TGG 0.491570 2_3:-6265791 None:intergenic
GTTTCCAGAGAGAAAAGGCC+AGG 0.493523 2_3:+6264556 Msa0274440:CDS
CAGTCAAGATTGAGAATGTA+GGG 0.493558 2_3:-6264735 None:intergenic
GCAGCTGCAGCCTCAGAGGA+GGG 0.494418 2_3:-6263089 None:intergenic
AGTGGAAAGTTGGAAGGAGA+AGG 0.496844 2_3:+6262630 Msa0274440:CDS
TCATGTTATGTTTCAGATGA+TGG 0.497524 2_3:+6263675 Msa0274440:CDS
GTTAATATGAAAGGACTTGA+CGG 0.500626 2_3:+6265043 Msa0274440:CDS
GACCAAAGAATAACAATGGT+TGG 0.504983 2_3:-6266726 None:intergenic
CATTCAAGGACCTGTATATG+TGG 0.505545 2_3:+6265066 Msa0274440:CDS
AGTTAATGCTTTGGTAGCTA+AGG 0.507653 2_3:+6264150 Msa0274440:CDS
GGATCCCTCAATGCTGATCA+AGG 0.508828 2_3:+6265490 Msa0274440:CDS
GGCGCTGACCCTTTGAACGC+AGG 0.510546 2_3:-6265770 None:intergenic
GGATTGATTTGCAGGAACTT+TGG 0.512377 2_3:-6262059 None:intergenic
AATAATTCACGCGACCATCC+TGG 0.512735 2_3:+6264229 Msa0274440:CDS
CCTTAAGGCCTGCGTTCAAA+GGG 0.514211 2_3:+6265762 Msa0274440:CDS
TAAAGTCAGAGTTAATGCTT+TGG 0.514285 2_3:+6264141 Msa0274440:CDS
AGTGACTGAGGATATCTTAA+CGG 0.514913 2_3:+6265694 Msa0274440:CDS
AATTGAAATATTATTGGTGA+AGG 0.515318 2_3:-6261391 None:intergenic
CCAGTGTTCTTGAGCTGAGG+TGG 0.517435 2_3:+6266325 Msa0274440:CDS
CCTGCAATTTGCCTACTCAC+AGG 0.518245 2_3:+6265986 Msa0274440:CDS
GAATAACAATGGTTGGAGTA+CGG 0.518540 2_3:-6266719 None:intergenic
TGTAGATAGAACAAGAGGTA+AGG 0.518619 2_3:+6262030 Msa0274440:intron
TGAAGGTGATTGTAGTATGG+TGG 0.519367 2_3:-6261374 None:intergenic
AAGAACTTGGTGCAAACGAT+CGG 0.519660 2_3:-6265804 None:intergenic
ACAGTCAAGATTGAGAATGT+AGG 0.519877 2_3:-6264736 None:intergenic
AAAGAGGACAATGTCTACTA+AGG 0.520358 2_3:-6265856 None:intergenic
GCTCAGAAAACACCAGATGA+AGG 0.520957 2_3:+6264172 Msa0274440:CDS
CAAGATGGAACCTCTTGGCC+AGG 0.521330 2_3:+6264205 Msa0274440:CDS
ACTTGCATTATGTAGGATGT+TGG 0.524011 2_3:+6262429 Msa0274440:intron
AGCTCTGAGACATCTTTGGC+AGG 0.529462 2_3:-6265193 None:intergenic
ATGATTATAACAGTTCTGTA+TGG 0.530674 2_3:-6263158 None:intergenic
CCATGTCAGGTTTGAAAGAG+AGG 0.530844 2_3:+6263524 Msa0274440:intron
TCATCCATCTGCTGTTCATG+TGG 0.531385 2_3:-6262709 None:intergenic
GCCACAACCGATTACATGAA+TGG 0.535283 2_3:-6265516 None:intergenic
CTGGAAACATAGACCAACCT+TGG 0.535961 2_3:-6264541 None:intergenic
CCCATAAGACCCTTAAGGAA+TGG 0.536403 2_3:-6266687 None:intergenic
GGATTCCTAAAGATGTTAGC+AGG 0.539539 2_3:+6266435 Msa0274440:CDS
TTTGCACCAAGTTCTTCGAT+GGG 0.539861 2_3:+6265811 Msa0274440:CDS
AAAGACAGCATGGGGAAAAG+AGG 0.541039 2_3:+6265547 Msa0274440:CDS
CTTTGGCAGGCTTCTTTGAG+CGG 0.542540 2_3:-6265180 None:intergenic
CTATGCAAGATGGAACCTCT+TGG 0.544549 2_3:+6264200 Msa0274440:CDS
CGTGAGCACCACTGTGTCCA+AGG 0.546803 2_3:-6264498 None:intergenic
TCAAGATGCAATGTCGTGGA+TGG 0.547900 2_3:+6265720 Msa0274440:CDS
GAATCTACACTAATGGAGAA+TGG 0.550905 2_3:+6265449 Msa0274440:CDS
TAAAGAGACCAATAATTGAC+TGG 0.552549 2_3:+6267053 Msa0274440:three_prime_UTR
AAATAGAGTGGAAAGTTGGA+AGG 0.558941 2_3:+6262624 Msa0274440:CDS
CAAAGTCAGCTGTCTCCACA+AGG 0.559322 2_3:-6263722 None:intergenic
AGCTGACTTTGCAAGAAAGT+GGG 0.560279 2_3:+6263734 Msa0274440:CDS
CGAGGGGAAGGGATGTGAAA+GGG 0.562379 2_3:-6265946 None:intergenic
GGCTGGTGCTGAAAATGCAC+TGG 0.563372 2_3:+6264597 Msa0274440:CDS
GGCCTCCTTGATCAGCATTG+AGG 0.563747 2_3:-6265495 None:intergenic
ACATTTCAGGTTAATATGAA+AGG 0.564196 2_3:+6265034 Msa0274440:intron
GCTTTATAAAGATGCAAAGA+GGG 0.565584 2_3:+6265213 Msa0274440:CDS
ACGAGGGGAAGGGATGTGAA+AGG 0.568075 2_3:-6265947 None:intergenic
AGGAAACGAACTTCCAAGGT+TGG 0.569266 2_3:+6264528 Msa0274440:CDS
CTTTGGTATGGATTTGCTGG+TGG 0.569669 2_3:+6265875 Msa0274440:CDS
CTAGTGTACCATACCAGCAT+AGG 0.570112 2_3:-6261720 None:intergenic
AGATATACCTGAATCATGCC+AGG 0.571408 2_3:-6264247 None:intergenic
TAGAAGGAAACGAACTTCCA+AGG 0.571501 2_3:+6264524 Msa0274440:CDS
GTAGTGATCGATATGCCAAC+CGG 0.572003 2_3:+6264877 Msa0274440:CDS
GAAGGTGATTGTAGTATGGT+GGG 0.574818 2_3:-6261373 None:intergenic
ACTGGAATTATCACTGAAAG+TGG 0.576761 2_3:-6263116 None:intergenic
CGTAGTGTTTGTTTGAGATG+TGG 0.577302 2_3:+6261692 Msa0274440:CDS
TCCACAGGAGCAAGCTGACA+AGG 0.577378 2_3:-6263552 None:intergenic
AGATGTGGCAATCCCTATGC+TGG 0.577557 2_3:+6261707 Msa0274440:CDS
AGATGCAATGTCGTGGATGG+AGG 0.581673 2_3:+6265723 Msa0274440:CDS
AGTTCCACATGAACAGCAGA+TGG 0.583014 2_3:+6262705 Msa0274440:CDS
AACTCTTGTGGTGAACAAGT+TGG 0.583291 2_3:+6261578 Msa0274440:CDS
CTCAGAAAACACCAGATGAA+GGG 0.585547 2_3:+6264173 Msa0274440:CDS
ACAAACACTACGTCCCTCAC+TGG 0.586268 2_3:-6261681 None:intergenic
GAGCAGTTCTGGGTAATTGG+AGG 0.587105 2_3:+6266381 Msa0274440:CDS
TTACGGACAGGCTCTCGGCA+AGG 0.587814 2_3:+6263342 Msa0274440:CDS
ATTCAAGGACCTGTATATGT+GGG 0.589043 2_3:+6265067 Msa0274440:CDS
GATCTGTGCAGCCGTTGTTG+TGG 0.589939 2_3:-6262080 None:intergenic
GGACCTGTATATGTGGGGAC+TGG 0.590486 2_3:+6265073 Msa0274440:CDS
CATGTCAGGTTTGAAAGAGA+GGG 0.592103 2_3:+6263525 Msa0274440:intron
TCTATGTTTCCAGAGAGAAA+AGG 0.594564 2_3:+6264551 Msa0274440:CDS
TTCTGAGAGAAGTAAAACTC+AGG 0.597805 2_3:-6263795 None:intergenic
ATAATGATAAGACTTGTTGG+AGG 0.598030 2_3:-6266549 None:intergenic
CTGTACTGATATGCCTAGCA+TGG 0.603242 2_3:-6262455 None:intergenic
AGTTCTTTCTATCCTTGCCG+TGG 0.604170 2_3:+6263632 Msa0274440:CDS
TTCTTTACCACTGTCCACTG+TGG 0.605231 2_3:-6262481 None:intergenic
TTTCTGATGGATCCAGTAGT+CGG 0.606024 2_3:+6264804 Msa0274440:CDS
AGGATGTTGGACTCCATGCT+AGG 0.607182 2_3:+6262442 Msa0274440:intron
GCTACGAAGAAAAGACAGCA+TGG 0.608415 2_3:+6265537 Msa0274440:CDS
CTACGAAGAAAAGACAGCAT+GGG 0.610425 2_3:+6265538 Msa0274440:CDS
TAGTGTACCATACCAGCATA+GGG 0.611558 2_3:-6261719 None:intergenic
CCACCTCAGCTCAAGAACAC+TGG 0.612331 2_3:-6266325 None:intergenic
CAAAGTACAATAAGCAACGA+GGG 0.616695 2_3:-6265963 None:intergenic
CCTTGCCGTGGACTATCCTG+TGG 0.617307 2_3:+6263644 Msa0274440:CDS
ACAATAAGCAACGAGGGGAA+GGG 0.618532 2_3:-6265957 None:intergenic
GAAGAAAACTGTGTTCCGGT+TGG 0.618594 2_3:-6264892 None:intergenic
GAAGGGTGGACTATGCAAGA+TGG 0.623650 2_3:+6264190 Msa0274440:CDS
CAGACTATGATGAGTATGAG+AGG 0.626804 2_3:+6265366 Msa0274440:intron
GTACTGACAAAGAAATCCAC+AGG 0.626913 2_3:-6263567 None:intergenic
AAGTAAAACTCAGGTGCACG+TGG 0.627075 2_3:-6263786 None:intergenic
AGGAAAATTCATCATACCAA+CGG 0.627464 2_3:+6266006 Msa0274440:CDS
TTGATGATGATTCAATTGCA+AGG 0.628156 2_3:+6266931 Msa0274440:three_prime_UTR
AGCTTTATAAAGATGCAAAG+AGG 0.631014 2_3:+6265212 Msa0274440:CDS
GATATATGGTTCAGTGACTG+AGG 0.631286 2_3:+6265682 Msa0274440:CDS
TACGAAGAAAAGACAGCATG+GGG 0.632594 2_3:+6265539 Msa0274440:CDS
GGGTTCAAGATGCAATGTCG+TGG 0.634201 2_3:+6265716 Msa0274440:CDS
TGAATTATTTCCTGGCCAAG+AGG 0.637280 2_3:-6264215 None:intergenic
ATACCTGAATCATGCCAGGA+TGG 0.638411 2_3:-6264243 None:intergenic
ACTGTGTTAGCTGTGATCAA+CGG 0.640138 2_3:-6263612 None:intergenic
CCAGCAAATCCATACCAAAG+AGG 0.645200 2_3:-6265872 None:intergenic
AATGGTGGATATGAATCTTG+GGG 0.645925 2_3:+6266612 Msa0274440:CDS
GCTGACATTTGAATCCCTTG+TGG 0.648985 2_3:+6263707 Msa0274440:CDS
CCACAGGATAGTCCACGGCA+AGG 0.649649 2_3:-6263644 None:intergenic
TGGTGGTGTGTCTGAATCTG+CGG 0.650585 2_3:+6265469 Msa0274440:CDS
AGAAAACACCAGATGAAGGG+TGG 0.652717 2_3:+6264176 Msa0274440:CDS
TCATTATGTTAACAATAGCA+AGG 0.652996 2_3:+6264761 Msa0274440:CDS
TGTAGATTCAATGAAAACAG+TGG 0.654650 2_3:-6265435 None:intergenic
TGCAAATCAATCCACAACAA+CGG 0.656384 2_3:+6262069 Msa0274440:CDS
TCAATACCATCAAATCTTTG+GGG 0.656574 2_3:-6264852 None:intergenic
CACTGACCAAAGAATAACAA+TGG 0.657457 2_3:-6266730 None:intergenic
ACAGAACTGTTATAATCATG+CGG 0.661205 2_3:+6263162 Msa0274440:CDS
TGACCAGTGTTCTTGAGCTG+AGG 0.662591 2_3:+6266322 Msa0274440:CDS
TTCAAGGACCTGTATATGTG+GGG 0.662756 2_3:+6265068 Msa0274440:CDS
GTTCTTGAGCTGAGGTGGAG+CGG 0.667058 2_3:+6266330 Msa0274440:CDS
ATCCAGCTACAACACCAACA+AGG 0.679092 2_3:-6266575 None:intergenic
TGGAGTTGATGCTAATGGAG+AGG 0.686489 2_3:+6261598 Msa0274440:CDS
CAATACCATCAAATCTTTGG+GGG 0.690770 2_3:-6264851 None:intergenic
GGATGTGAAAGGGTAAACGA+TGG 0.692923 2_3:-6265936 None:intergenic
AAAGTACAATAAGCAACGAG+GGG 0.696943 2_3:-6265962 None:intergenic
ACAGTGTCCACAGTGGACAG+TGG 0.698824 2_3:+6262474 Msa0274440:CDS
AAAGTCAGCTGTCTCCACAA+GGG 0.704045 2_3:-6263721 None:intergenic
GTGTTAGCTGTGATCAACGG+CGG 0.713429 2_3:-6263609 None:intergenic
AGGGAACTGATCTAACACCC+AGG 0.715025 2_3:-6263291 None:intergenic
GCAAAGTACAATAAGCAACG+AGG 0.722782 2_3:-6265964 None:intergenic
TCCCTCAATGCTGATCAAGG+AGG 0.726123 2_3:+6265493 Msa0274440:CDS
TGTTGATTATGAAACCAGTG+AGG 0.744546 2_3:+6261667 Msa0274440:CDS
TCTACACTAATGGAGAATGG+TGG 0.757581 2_3:+6265452 Msa0274440:CDS
GTTGATTATGAAACCAGTGA+GGG 0.757954 2_3:+6261668 Msa0274440:CDS
TATCAGTACAGTGTCCACAG+TGG 0.762817 2_3:+6262467 Msa0274440:CDS
TGACTGAGGATATCTTAACG+GGG 0.810778 2_3:+6265696 Msa0274440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATTGATATTTAATATTA+TGG - chr2_3:6262941-6262960 None:intergenic 10.0%
!! TAACATTAATACATTACAAT+AGG + chr2_3:6262130-6262149 Msa0274440:intron 15.0%
!!! TGGGAAAATATAAATTTTTA+AGG + chr2_3:6262321-6262340 Msa0274440:intron 15.0%
!!! TATAAATTTTTAAGGACAAT+AGG + chr2_3:6262329-6262348 Msa0274440:intron 15.0%
!!! CATTTTATATAATTTTGTTC+AGG - chr2_3:6262770-6262789 None:intergenic 15.0%
!!! TTTAGAAGTATTTATGATTA+AGG + chr2_3:6262833-6262852 Msa0274440:intron 15.0%
!! TTCATATAAAATGAATTGTA+CGG + chr2_3:6263932-6263951 Msa0274440:intron 15.0%
!!! TAATTTTCTCATCTTTATTT+TGG + chr2_3:6266029-6266048 Msa0274440:intron 15.0%
!!! CTTAGTTTTTTATTAGTTAT+TGG - chr2_3:6266165-6266184 None:intergenic 15.0%
!! AATTGAAAAATCATATAACA+AGG - chr2_3:6267182-6267201 None:intergenic 15.0%
!! AATTGAAATATTATTGGTGA+AGG - chr2_3:6261394-6261413 None:intergenic 20.0%
!! TTTGACATAAACAAAAATGA+TGG + chr2_3:6261535-6261554 Msa0274440:exon 20.0%
!! ATTATTTGTTTCATTCACTT+AGG + chr2_3:6261950-6261969 Msa0274440:intron 20.0%
!!! ATTTATATTTTCCCAAAAAC+TGG - chr2_3:6262316-6262335 None:intergenic 20.0%
!! CTTTACACTAAAAGTAAATA+TGG + chr2_3:6262908-6262927 Msa0274440:intron 20.0%
!!! CACTTGTTTATTATTTTTGT+TGG + chr2_3:6263031-6263050 Msa0274440:intron 20.0%
!!! ATTCATTTTCTTGAAGTATA+AGG - chr2_3:6263395-6263414 None:intergenic 20.0%
!! ACAGTAAAGTAATATCTAAA+TGG + chr2_3:6263428-6263447 Msa0274440:intron 20.0%
!! GTGACATCATTATAATTAAT+TGG + chr2_3:6264386-6264405 Msa0274440:intron 20.0%
!! TATTAAAATGAAAGCTGAAT+CGG - chr2_3:6264456-6264475 None:intergenic 20.0%
!! ACTTTATAGACTCATTAATA+AGG + chr2_3:6265315-6265334 Msa0274440:intron 20.0%
!! TTAATAATGATAAGACTTGT+TGG - chr2_3:6266555-6266574 None:intergenic 20.0%
!! ATAACATATGATCAAAACTT+TGG - chr2_3:6266888-6266907 None:intergenic 20.0%
!! TTTGATCATATGTTATGATA+TGG + chr2_3:6266892-6266911 Msa0274440:three_prime_UTR 20.0%
!!! TGTAAGCATTTTGAATTATA+AGG + chr2_3:6266990-6267009 Msa0274440:three_prime_UTR 20.0%
!! AGATATCAATGTAAAAATAG+TGG + chr2_3:6267080-6267099 Msa0274440:three_prime_UTR 20.0%
!! TCTCAAACTATACTCTTTTA+TGG - chr2_3:6261482-6261501 None:intergenic 25.0%
! AGTATAGTTTGAGAAGTTAA+GGG + chr2_3:6261488-6261507 Msa0274440:five_prime_UTR 25.0%
! TTTGTTTATGTCAAACTTCA+AGG - chr2_3:6261530-6261549 None:intergenic 25.0%
!! TAAACAAAAATGATGGAATC+TGG + chr2_3:6261542-6261561 Msa0274440:exon 25.0%
! TGTACACTCTAATTAAAAAG+AGG + chr2_3:6261857-6261876 Msa0274440:intron 25.0%
! GAATGCTTAAAATCAATGAA+TGG - chr2_3:6261917-6261936 None:intergenic 25.0%
!! TATTTTGTAGATAGAACAAG+AGG + chr2_3:6262025-6262044 Msa0274440:intron 25.0%
!! ATTAACCTTAGTTTGAGATT+TGG + chr2_3:6262164-6262183 Msa0274440:intron 25.0%
! TAACTGTTAGATGAAAAGAT+CGG - chr2_3:6262257-6262276 None:intergenic 25.0%
! TAGAATTAAATGATGAGTCT+GGG + chr2_3:6262587-6262606 Msa0274440:intron 25.0%
! CAAAAAGAACAAGAAGAAAA+AGG + chr2_3:6262654-6262673 Msa0274440:CDS 25.0%
!! GATTTTGCATCAATGTATTA+TGG + chr2_3:6262962-6262981 Msa0274440:intron 25.0%
! ATCAGAATAAATATTGAGCA+AGG - chr2_3:6263057-6263076 None:intergenic 25.0%
!! TTTATTCTGATCTATTTTGC+AGG + chr2_3:6263066-6263085 Msa0274440:intron 25.0%
! ATGATTATAACAGTTCTGTA+TGG - chr2_3:6263161-6263180 None:intergenic 25.0%
! ACTTCAAGAAAATGAATCAA+TGG + chr2_3:6263398-6263417 Msa0274440:intron 25.0%
!! ATCTCAAACTTTTTGCAAAA+TGG - chr2_3:6263762-6263781 None:intergenic 25.0%
! TTGGCTATAGAATTATTGAA+AGG + chr2_3:6264343-6264362 Msa0274440:intron 25.0%
! TCACATACATCAACAATATT+TGG - chr2_3:6264370-6264389 None:intergenic 25.0%
! TAATATCTGTTATCATTGTC+AGG + chr2_3:6264471-6264490 Msa0274440:intron 25.0%
! ACGCTTATTTCGATTATTAT+AGG + chr2_3:6264683-6264702 Msa0274440:intron 25.0%
! TATTTCGATTATTATAGGTG+AGG + chr2_3:6264688-6264707 Msa0274440:intron 25.0%
! ATTTCGATTATTATAGGTGA+GGG + chr2_3:6264689-6264708 Msa0274440:intron 25.0%
! TCATTATGTTAACAATAGCA+AGG + chr2_3:6264761-6264780 Msa0274440:CDS 25.0%
! ATCAATACCATCAAATCTTT+GGG - chr2_3:6264856-6264875 None:intergenic 25.0%
!!! CATTGACTTTAACAATTATG+AGG + chr2_3:6264967-6264986 Msa0274440:intron 25.0%
!!! ACATTTCAGGTTAATATGAA+AGG + chr2_3:6265034-6265053 Msa0274440:intron 25.0%
!!! AAGATGAAGATTTTGGTAAT+GGG - chr2_3:6265150-6265169 None:intergenic 25.0%
! CATTAATAAGGCATATCTTT+CGG + chr2_3:6265327-6265346 Msa0274440:intron 25.0%
!!! CTTAGCTTTGAAAAAACATT+TGG + chr2_3:6265407-6265426 Msa0274440:CDS 25.0%
! TTTCATTGAATCTACACTAA+TGG + chr2_3:6265442-6265461 Msa0274440:CDS 25.0%
! GTGAACTATATATGATCAAA+TGG + chr2_3:6266511-6266530 Msa0274440:CDS 25.0%
! CTTATCATTATTAACCTTGT+TGG + chr2_3:6266561-6266580 Msa0274440:CDS 25.0%
!! AAAAGTTTTCTTCGCATTTT+GGG + chr2_3:6266647-6266666 Msa0274440:CDS 25.0%
! ATCTATAACCAGTCAATTAT+TGG - chr2_3:6267064-6267083 None:intergenic 25.0%
! ATTTTCAGAAGTTAAGTGGT+TGG - chr2_3:6261350-6261369 None:intergenic 30.0%
! GTTCATTTTCAGAAGTTAAG+TGG - chr2_3:6261354-6261373 None:intergenic 30.0%
GAGTATAGTTTGAGAAGTTA+AGG + chr2_3:6261487-6261506 Msa0274440:five_prime_UTR 30.0%
!! GTGTTATTTCCCAATTTGTA+AGG + chr2_3:6261640-6261659 Msa0274440:CDS 30.0%
TTCACCAAACTTTGATATCT+GGG - chr2_3:6262217-6262236 None:intergenic 30.0%
GTAGAATTAAATGATGAGTC+TGG + chr2_3:6262586-6262605 Msa0274440:intron 30.0%
ACAGAACTGTTATAATCATG+CGG + chr2_3:6263162-6263181 Msa0274440:CDS 30.0%
TATTGATAGGAGACCATTTA+GGG - chr2_3:6263313-6263332 None:intergenic 30.0%
TAAATGGTCTCCTATCAATA+GGG + chr2_3:6263313-6263332 Msa0274440:CDS 30.0%
!!! TATCAATAGGGTTGCTTTTA+CGG + chr2_3:6263325-6263344 Msa0274440:CDS 30.0%
AAACTTTATATTGCCATGTC+AGG + chr2_3:6263511-6263530 Msa0274440:intron 30.0%
!!! TAACATGATACTTTTTCCAC+AGG - chr2_3:6263663-6263682 None:intergenic 30.0%
TCATGTTATGTTTCAGATGA+TGG + chr2_3:6263675-6263694 Msa0274440:CDS 30.0%
TCAGAAGATTGACTATTTGA+AGG + chr2_3:6263812-6263831 Msa0274440:CDS 30.0%
AATACTGAATGTCAGAAACA+AGG - chr2_3:6264065-6264084 None:intergenic 30.0%
TAAAGTCAGAGTTAATGCTT+TGG + chr2_3:6264141-6264160 Msa0274440:CDS 30.0%
AATCAAATCTCAATGATGAG+AGG + chr2_3:6264285-6264304 Msa0274440:intron 30.0%
TCAATACCATCAAATCTTTG+GGG - chr2_3:6264855-6264874 None:intergenic 30.0%
GATCAATACCATCAAATCTT+TGG - chr2_3:6264857-6264876 None:intergenic 30.0%
TATTAACCTGAAATGTGTCA+AGG - chr2_3:6265030-6265049 None:intergenic 30.0%
GTTAATATGAAAGGACTTGA+CGG + chr2_3:6265043-6265062 Msa0274440:CDS 30.0%
!!! AGATGAAGATTTTGGTAATG+GGG - chr2_3:6265149-6265168 None:intergenic 30.0%
!! CAAGATGAAGATTTTGGTAA+TGG - chr2_3:6265151-6265170 None:intergenic 30.0%
! AGCTTTATAAAGATGCAAAG+AGG + chr2_3:6265212-6265231 Msa0274440:CDS 30.0%
GCTTTATAAAGATGCAAAGA+GGG + chr2_3:6265213-6265232 Msa0274440:CDS 30.0%
!!! ATGCTGCTATTTTTAATCTC+AGG + chr2_3:6265245-6265264 Msa0274440:CDS 30.0%
!!! TGCTGCTATTTTTAATCTCA+GGG + chr2_3:6265246-6265265 Msa0274440:CDS 30.0%
TGTAGATTCAATGAAAACAG+TGG - chr2_3:6265438-6265457 None:intergenic 30.0%
TTATCTTACAAGACACTGAA+AGG - chr2_3:6265609-6265628 None:intergenic 30.0%
TATTGTGTATTCAGATTGGT+TGG + chr2_3:6265660-6265679 Msa0274440:intron 30.0%
! ATTCAGATTGGTTGGATATA+TGG + chr2_3:6265668-6265687 Msa0274440:intron 30.0%
AGGAAAATTCATCATACCAA+CGG + chr2_3:6266006-6266025 Msa0274440:CDS 30.0%
AAAGATGAGAAAATTACCGT+TGG - chr2_3:6266025-6266044 None:intergenic 30.0%
GTGTTACCATAGAAGATTTA+TGG + chr2_3:6266352-6266371 Msa0274440:CDS 30.0%
!! ATAATGATAAGACTTGTTGG+AGG - chr2_3:6266552-6266571 None:intergenic 30.0%
!! TTAATGGTGGATATGAATCT+TGG + chr2_3:6266610-6266629 Msa0274440:CDS 30.0%
!! TAATGGTGGATATGAATCTT+GGG + chr2_3:6266611-6266630 Msa0274440:CDS 30.0%
! AAGAAAACTTTTCCAATGAG+TGG - chr2_3:6266639-6266658 None:intergenic 30.0%
! GAAAAGTTTTCTTCGCATTT+TGG + chr2_3:6266646-6266665 Msa0274440:CDS 30.0%
TCATCTTTATCCATTCCTTA+AGG + chr2_3:6266677-6266696 Msa0274440:CDS 30.0%
CATCTTTATCCATTCCTTAA+GGG + chr2_3:6266678-6266697 Msa0274440:CDS 30.0%
!! TTGATGATGATTCAATTGCA+AGG + chr2_3:6266931-6266950 Msa0274440:three_prime_UTR 30.0%
! TGTACTTTTATTCCATGCTT+TGG + chr2_3:6267016-6267035 Msa0274440:three_prime_UTR 30.0%
TAAAGAGACCAATAATTGAC+TGG + chr2_3:6267053-6267072 Msa0274440:three_prime_UTR 30.0%
TCCAACTAATTCTTCCCTTA+AGG + chr2_3:6261419-6261438 Msa0274440:five_prime_UTR 35.0%
TCCTTAAGGGAAGAATTAGT+TGG - chr2_3:6261423-6261442 None:intergenic 35.0%
GTCAATGAAGCAATCCTTAA+GGG - chr2_3:6261436-6261455 None:intergenic 35.0%
AGTCAATGAAGCAATCCTTA+AGG - chr2_3:6261437-6261456 None:intergenic 35.0%
GTTAAGGGTCATAGAGTTTA+TGG + chr2_3:6261503-6261522 Msa0274440:five_prime_UTR 35.0%
!!! GTTAGCTTTTGTAACTCTTG+TGG + chr2_3:6261566-6261585 Msa0274440:CDS 35.0%
CAACACAAGCCTTACAAATT+GGG - chr2_3:6261652-6261671 None:intergenic 35.0%
TCAACACAAGCCTTACAAAT+TGG - chr2_3:6261653-6261672 None:intergenic 35.0%
! TGTTGATTATGAAACCAGTG+AGG + chr2_3:6261667-6261686 Msa0274440:CDS 35.0%
GTTGATTATGAAACCAGTGA+GGG + chr2_3:6261668-6261687 Msa0274440:CDS 35.0%
GATCTGTAGAAATCAGACAT+TGG - chr2_3:6261747-6261766 None:intergenic 35.0%
TGTAGATAGAACAAGAGGTA+AGG + chr2_3:6262030-6262049 Msa0274440:intron 35.0%
TGCAAATCAATCCACAACAA+CGG + chr2_3:6262069-6262088 Msa0274440:CDS 35.0%
AGAGTCCAAATCTCAAACTA+AGG - chr2_3:6262172-6262191 None:intergenic 35.0%
CTTCACCAAACTTTGATATC+TGG - chr2_3:6262218-6262237 None:intergenic 35.0%
! AGAATCTAGGTCCAGTTTTT+GGG + chr2_3:6262302-6262321 Msa0274440:intron 35.0%
AACCTCTACTTGCATTATGT+AGG + chr2_3:6262422-6262441 Msa0274440:intron 35.0%
ATCCTACATAATGCAAGTAG+AGG - chr2_3:6262427-6262446 None:intergenic 35.0%
ACTTGCATTATGTAGGATGT+TGG + chr2_3:6262429-6262448 Msa0274440:intron 35.0%
TCCTATCTGGAAAAATAGAG+TGG + chr2_3:6262612-6262631 Msa0274440:CDS 35.0%
!! TCCACTCTATTTTTCCAGAT+AGG - chr2_3:6262616-6262635 None:intergenic 35.0%
GGAAAAATAGAGTGGAAAGT+TGG + chr2_3:6262620-6262639 Msa0274440:CDS 35.0%
AAATAGAGTGGAAAGTTGGA+AGG + chr2_3:6262624-6262643 Msa0274440:CDS 35.0%
TGCAGTAAGTTCAATGAGAA+AGG + chr2_3:6262734-6262753 Msa0274440:intron 35.0%
ACTGGAATTATCACTGAAAG+TGG - chr2_3:6263119-6263138 None:intergenic 35.0%
CTGGATGTGTAACTCTATAA+TGG - chr2_3:6263211-6263230 None:intergenic 35.0%
TGTTAGATCAGTTCCCTAAA+TGG + chr2_3:6263297-6263316 Msa0274440:CDS 35.0%
CTATTGATAGGAGACCATTT+AGG - chr2_3:6263314-6263333 None:intergenic 35.0%
CTAAATGGTCTCCTATCAAT+AGG + chr2_3:6263312-6263331 Msa0274440:CDS 35.0%
GTAAAAGCAACCCTATTGAT+AGG - chr2_3:6263326-6263345 None:intergenic 35.0%
CAAGGTAATTGGAAGCTATT+TGG + chr2_3:6263360-6263379 Msa0274440:intron 35.0%
! TTCTGAGAGAAGTAAAACTC+AGG - chr2_3:6263798-6263817 None:intergenic 35.0%
! AGTTCAACCTTCTTTTGTGA+AGG + chr2_3:6263839-6263858 Msa0274440:CDS 35.0%
! AGTTAATGCTTTGGTAGCTA+AGG + chr2_3:6264150-6264169 Msa0274440:CDS 35.0%
! TATCATTGTCAGGTTTTCCT+TGG + chr2_3:6264481-6264500 Msa0274440:intron 35.0%
TCTATGTTTCCAGAGAGAAA+AGG + chr2_3:6264551-6264570 Msa0274440:CDS 35.0%
! TAAGCTCGTCAAGATTTTGT+AGG + chr2_3:6264655-6264674 Msa0274440:intron 35.0%
! AAGCTCGTCAAGATTTTGTA+GGG + chr2_3:6264656-6264675 Msa0274440:intron 35.0%
CAGTCAAGATTGAGAATGTA+GGG - chr2_3:6264738-6264757 None:intergenic 35.0%
ACAGTCAAGATTGAGAATGT+AGG - chr2_3:6264739-6264758 None:intergenic 35.0%
CAATACCATCAAATCTTTGG+GGG - chr2_3:6264854-6264873 None:intergenic 35.0%
CAATTATGAGGCGAAAATCA+TGG + chr2_3:6264979-6264998 Msa0274440:intron 35.0%
TTCTAACCTTGACACATTTC+AGG + chr2_3:6265021-6265040 Msa0274440:intron 35.0%
ATTCAAGGACCTGTATATGT+GGG + chr2_3:6265067-6265086 Msa0274440:CDS 35.0%
!!! GATGAAGATTTTGGTAATGG+GGG - chr2_3:6265148-6265167 None:intergenic 35.0%
! CAACAGCAAGATGAAGATTT+TGG - chr2_3:6265157-6265176 None:intergenic 35.0%
!! ATAAAGCTCTGAGACATCTT+TGG - chr2_3:6265200-6265219 None:intergenic 35.0%
GAATCTACACTAATGGAGAA+TGG + chr2_3:6265449-6265468 Msa0274440:CDS 35.0%
TCTGAATACACAATACAGCA+AGG - chr2_3:6265655-6265674 None:intergenic 35.0%
GCTGTATTGTGTATTCAGAT+TGG + chr2_3:6265656-6265675 Msa0274440:intron 35.0%
AGTGACTGAGGATATCTTAA+CGG + chr2_3:6265694-6265713 Msa0274440:CDS 35.0%
AAACGATCGGAAAGATTGAT+TGG - chr2_3:6265794-6265813 None:intergenic 35.0%
AAAGAGGACAATGTCTACTA+AGG - chr2_3:6265859-6265878 None:intergenic 35.0%
TTAGTAGACATTGTCCTCTT+TGG + chr2_3:6265858-6265877 Msa0274440:CDS 35.0%
AAAGTACAATAAGCAACGAG+GGG - chr2_3:6265965-6265984 None:intergenic 35.0%
CAAAGTACAATAAGCAACGA+GGG - chr2_3:6265966-6265985 None:intergenic 35.0%
! TGATGAATTTTCCTGTGAGT+AGG - chr2_3:6266000-6266019 None:intergenic 35.0%
!!! ATTGCAAGTGCACTTTTTCT+TGG + chr2_3:6266279-6266298 Msa0274440:CDS 35.0%
GTTACGCCATAAATCTTCTA+TGG - chr2_3:6266361-6266380 None:intergenic 35.0%
! CTAACATCTTTAGGAATCCT+TGG - chr2_3:6266434-6266453 None:intergenic 35.0%
! GGATTTTCTGATGCACTTAA+TGG + chr2_3:6266594-6266613 Msa0274440:CDS 35.0%
! TTTTCTGATGCACTTAATGG+TGG + chr2_3:6266597-6266616 Msa0274440:CDS 35.0%
!! AATGGTGGATATGAATCTTG+GGG + chr2_3:6266612-6266631 Msa0274440:CDS 35.0%
GAATAACAATGGTTGGAGTA+CGG - chr2_3:6266722-6266741 None:intergenic 35.0%
! CTCCAACCATTGTTATTCTT+TGG + chr2_3:6266724-6266743 Msa0274440:CDS 35.0%
GACCAAAGAATAACAATGGT+TGG - chr2_3:6266729-6266748 None:intergenic 35.0%
CACTGACCAAAGAATAACAA+TGG - chr2_3:6266733-6266752 None:intergenic 35.0%
! TATTCTTTGGTCAGTGCTTT+TGG + chr2_3:6266737-6266756 Msa0274440:CDS 35.0%
TTCTGTCTTCTCACTTGTTT+GGG + chr2_3:6266761-6266780 Msa0274440:CDS 35.0%
CTATCAACTTTGCTCACAAA+TGG - chr2_3:6266798-6266817 None:intergenic 35.0%
CAGAAAAATTGTCCAAAGCA+TGG - chr2_3:6267031-6267050 None:intergenic 35.0%
CAAGGTAGATAACATGAGTA+TGG - chr2_3:6267164-6267183 None:intergenic 35.0%
GAAGGTGATTGTAGTATGGT+GGG - chr2_3:6261376-6261395 None:intergenic 40.0%
TGAAGGTGATTGTAGTATGG+TGG - chr2_3:6261377-6261396 None:intergenic 40.0%
TGGTGAAGGTGATTGTAGTA+TGG - chr2_3:6261380-6261399 None:intergenic 40.0%
AACTCTTGTGGTGAACAAGT+TGG + chr2_3:6261578-6261597 Msa0274440:CDS 40.0%
!! CAAGTTGGAGTTGATGCTAA+TGG + chr2_3:6261593-6261612 Msa0274440:CDS 40.0%
! CGTAGTGTTTGTTTGAGATG+TGG + chr2_3:6261692-6261711 Msa0274440:CDS 40.0%
TAGTGTACCATACCAGCATA+GGG - chr2_3:6261722-6261741 None:intergenic 40.0%
!! GGATTGATTTGCAGGAACTT+TGG - chr2_3:6262062-6262081 None:intergenic 40.0%
!! GTTGTTGTGGATTGATTTGC+AGG - chr2_3:6262070-6262089 None:intergenic 40.0%
CGATCCCAGATATCAAAGTT+TGG + chr2_3:6262210-6262229 Msa0274440:intron 40.0%
AAGATCGGATGACTCATACT+AGG - chr2_3:6262242-6262261 None:intergenic 40.0%
! GAGAATCTAGGTCCAGTTTT+TGG + chr2_3:6262301-6262320 Msa0274440:intron 40.0%
!! GAAGAAAAAGGAAGCACCTA+AGG + chr2_3:6262666-6262685 Msa0274440:CDS 40.0%
!!! CCAAGTTTCGATTTTGAGAC+TGG - chr2_3:6263137-6263156 None:intergenic 40.0%
CCAGTCTCAAAATCGAAACT+TGG + chr2_3:6263134-6263153 Msa0274440:CDS 40.0%
AATCATGCGGCTCGTAATAT+TGG + chr2_3:6263175-6263194 Msa0274440:CDS 40.0%
ATCATGCGGCTCGTAATATT+GGG + chr2_3:6263176-6263195 Msa0274440:CDS 40.0%
!!! CATCCAGTTGATAGTGCTTT+TGG + chr2_3:6263224-6263243 Msa0274440:CDS 40.0%
!! AGACCAAAAGCACTATCAAC+TGG - chr2_3:6263230-6263249 None:intergenic 40.0%
!!! TTGATAGTGCTTTTGGTCTG+TGG + chr2_3:6263231-6263250 Msa0274440:CDS 40.0%
CATCTATCATCTGTGAGATC+TGG + chr2_3:6263258-6263277 Msa0274440:CDS 40.0%
!!! AGATCTGGTTTGCTTTTTCC+TGG + chr2_3:6263273-6263292 Msa0274440:CDS 40.0%
!!! GATCTGGTTTGCTTTTTCCT+GGG + chr2_3:6263274-6263293 Msa0274440:CDS 40.0%
CATGTCAGGTTTGAAAGAGA+GGG + chr2_3:6263525-6263544 Msa0274440:intron 40.0%
! GTACTGACAAAGAAATCCAC+AGG - chr2_3:6263570-6263589 None:intergenic 40.0%
ACTGTGTTAGCTGTGATCAA+CGG - chr2_3:6263615-6263634 None:intergenic 40.0%
! TTTTTCCACAGGATAGTCCA+CGG - chr2_3:6263652-6263671 None:intergenic 40.0%
! AGCTGACTTTGCAAGAAAGT+GGG + chr2_3:6263734-6263753 Msa0274440:CDS 40.0%
CTACGTTCCTTCACAAAAGA+AGG - chr2_3:6263849-6263868 None:intergenic 40.0%
ACTGAATGTCAGAAACAAGG+TGG - chr2_3:6264062-6264081 None:intergenic 40.0%
CTCAGAAAACACCAGATGAA+GGG + chr2_3:6264173-6264192 Msa0274440:CDS 40.0%
TGAATTATTTCCTGGCCAAG+AGG - chr2_3:6264218-6264237 None:intergenic 40.0%
AGATATACCTGAATCATGCC+AGG - chr2_3:6264250-6264269 None:intergenic 40.0%
! GATACCTAGTTTGTGCAACT+TGG + chr2_3:6264324-6264343 Msa0274440:intron 40.0%
ATAGCCAAGTTGCACAAACT+AGG - chr2_3:6264331-6264350 None:intergenic 40.0%
TAGAAGGAAACGAACTTCCA+AGG + chr2_3:6264524-6264543 Msa0274440:CDS 40.0%
!!! TTTTTGTGGTGTTGGTAACC+TGG - chr2_3:6264577-6264596 None:intergenic 40.0%
AGGTTACCAACACCACAAAA+AGG + chr2_3:6264576-6264595 Msa0274440:CDS 40.0%
! AGAAGCGATGTGTTTTCTGA+TGG + chr2_3:6264791-6264810 Msa0274440:CDS 40.0%
! TTTCTGATGGATCCAGTAGT+CGG + chr2_3:6264804-6264823 Msa0274440:CDS 40.0%
CATCGAAGAAAACTGTGTTC+CGG - chr2_3:6264899-6264918 None:intergenic 40.0%
CATTCAAGGACCTGTATATG+TGG + chr2_3:6265066-6265085 Msa0274440:CDS 40.0%
TTCAAGGACCTGTATATGTG+GGG + chr2_3:6265068-6265087 Msa0274440:CDS 40.0%
TTCAATCGACAAGCGCTTTA+TGG + chr2_3:6265103-6265122 Msa0274440:CDS 40.0%
CAGACTATGATGAGTATGAG+AGG + chr2_3:6265366-6265385 Msa0274440:intron 40.0%
TCTACACTAATGGAGAATGG+TGG + chr2_3:6265452-6265471 Msa0274440:CDS 40.0%
AAGGAGGCCATTCATGTAAT+CGG + chr2_3:6265509-6265528 Msa0274440:CDS 40.0%
CTACGAAGAAAAGACAGCAT+GGG + chr2_3:6265538-6265557 Msa0274440:CDS 40.0%
TACGAAGAAAAGACAGCATG+GGG + chr2_3:6265539-6265558 Msa0274440:CDS 40.0%
GATATATGGTTCAGTGACTG+AGG + chr2_3:6265682-6265701 Msa0274440:CDS 40.0%
GTGACTGAGGATATCTTAAC+GGG + chr2_3:6265695-6265714 Msa0274440:CDS 40.0%
TGACTGAGGATATCTTAACG+GGG + chr2_3:6265696-6265715 Msa0274440:CDS 40.0%
CAATTTACTGCATGCCCTTA+AGG + chr2_3:6265747-6265766 Msa0274440:CDS 40.0%
!! AAGAACTTGGTGCAAACGAT+CGG - chr2_3:6265807-6265826 None:intergenic 40.0%
TTTGCACCAAGTTCTTCGAT+GGG + chr2_3:6265811-6265830 Msa0274440:CDS 40.0%
AGACATTGTCCTCTTTGGTA+TGG + chr2_3:6265863-6265882 Msa0274440:CDS 40.0%
GCAAAGTACAATAAGCAACG+AGG - chr2_3:6265967-6265986 None:intergenic 40.0%
!! CATCTTTTTGCTGTCTTCCA+AGG + chr2_3:6266414-6266433 Msa0274440:CDS 40.0%
GGATTCCTAAAGATGTTAGC+AGG + chr2_3:6266435-6266454 Msa0274440:CDS 40.0%
CAACACCTGCTAACATCTTT+AGG - chr2_3:6266443-6266462 None:intergenic 40.0%
TCCATTCCTTAAGGGTCTTA+TGG + chr2_3:6266686-6266705 Msa0274440:CDS 40.0%
! CCATTCCTTAAGGGTCTTAT+GGG + chr2_3:6266687-6266706 Msa0274440:CDS 40.0%
CTTCTGTCTTCTCACTTGTT+TGG + chr2_3:6266760-6266779 Msa0274440:CDS 40.0%
ACTTTGGCAAGCACAATTGT+TGG - chr2_3:6266872-6266891 None:intergenic 40.0%
!! TGGAGTTGATGCTAATGGAG+AGG + chr2_3:6261598-6261617 Msa0274440:CDS 45.0%
!! TGCTAATGGAGAGGTGTTTG+TGG + chr2_3:6261607-6261626 Msa0274440:CDS 45.0%
CTAGTGTACCATACCAGCAT+AGG - chr2_3:6261723-6261742 None:intergenic 45.0%
! TTTGAGATTTGGACTCTCCG+CGG + chr2_3:6262175-6262194 Msa0274440:intron 45.0%
TACAGCACTGCAGAGAATCT+AGG + chr2_3:6262289-6262308 Msa0274440:intron 45.0%
! CTGTACTGATATGCCTAGCA+TGG - chr2_3:6262458-6262477 None:intergenic 45.0%
TATCAGTACAGTGTCCACAG+TGG + chr2_3:6262467-6262486 Msa0274440:CDS 45.0%
TTCTTTACCACTGTCCACTG+TGG - chr2_3:6262484-6262503 None:intergenic 45.0%
ATGAGTCTGGGAATCCTATC+TGG + chr2_3:6262599-6262618 Msa0274440:CDS 45.0%
AGTGGAAAGTTGGAAGGAGA+AGG + chr2_3:6262630-6262649 Msa0274440:CDS 45.0%
!! AAAAAGGAAGCACCTAAGGC+TGG + chr2_3:6262670-6262689 Msa0274440:CDS 45.0%
ATCTGCTGTTCATGTGGAAC+TGG - chr2_3:6262706-6262725 None:intergenic 45.0%
AGTTCCACATGAACAGCAGA+TGG + chr2_3:6262705-6262724 Msa0274440:CDS 45.0%
TCATCCATCTGCTGTTCATG+TGG - chr2_3:6262712-6262731 None:intergenic 45.0%
TTCGTGCAATTACAACGACG+TGG - chr2_3:6262989-6263008 None:intergenic 45.0%
!!! ATAGGGTTGCTTTTACGGAC+AGG + chr2_3:6263330-6263349 Msa0274440:CDS 45.0%
CCTCTCTTTCAAACCTGACA+TGG - chr2_3:6263527-6263546 None:intergenic 45.0%
CCATGTCAGGTTTGAAAGAG+AGG + chr2_3:6263524-6263543 Msa0274440:intron 45.0%
ATCAACGGCGGTTCTTTCAA+CGG - chr2_3:6263600-6263619 None:intergenic 45.0%
AGTTCTTTCTATCCTTGCCG+TGG + chr2_3:6263632-6263651 Msa0274440:CDS 45.0%
GCTGACATTTGAATCCCTTG+TGG + chr2_3:6263707-6263726 Msa0274440:CDS 45.0%
AAAGTCAGCTGTCTCCACAA+GGG - chr2_3:6263724-6263743 None:intergenic 45.0%
! CAGCTGACTTTGCAAGAAAG+TGG + chr2_3:6263733-6263752 Msa0274440:CDS 45.0%
AAGTAAAACTCAGGTGCACG+TGG - chr2_3:6263789-6263808 None:intergenic 45.0%
GCTCAGAAAACACCAGATGA+AGG + chr2_3:6264172-6264191 Msa0274440:CDS 45.0%
AGAAAACACCAGATGAAGGG+TGG + chr2_3:6264176-6264195 Msa0274440:CDS 45.0%
CTATGCAAGATGGAACCTCT+TGG + chr2_3:6264200-6264219 Msa0274440:CDS 45.0%
TGGTCGCGTGAATTATTTCC+TGG - chr2_3:6264226-6264245 None:intergenic 45.0%
AATAATTCACGCGACCATCC+TGG + chr2_3:6264229-6264248 Msa0274440:CDS 45.0%
ATACCTGAATCATGCCAGGA+TGG - chr2_3:6264246-6264265 None:intergenic 45.0%
AGGAAACGAACTTCCAAGGT+TGG + chr2_3:6264528-6264547 Msa0274440:CDS 45.0%
CTGGAAACATAGACCAACCT+TGG - chr2_3:6264544-6264563 None:intergenic 45.0%
TACCAACACCACAAAAAGGC+TGG + chr2_3:6264580-6264599 Msa0274440:CDS 45.0%
! TTTCAGCACCAGCCTTTTTG+TGG - chr2_3:6264591-6264610 None:intergenic 45.0%
! CAAACATCTCTACCGACTAC+TGG - chr2_3:6264819-6264838 None:intergenic 45.0%
CAGTTCCCCCAAAGATTTGA+TGG + chr2_3:6264846-6264865 Msa0274440:CDS 45.0%
GTAGTGATCGATATGCCAAC+CGG + chr2_3:6264877-6264896 Msa0274440:CDS 45.0%
GAAGAAAACTGTGTTCCGGT+TGG - chr2_3:6264895-6264914 None:intergenic 45.0%
AAAGGACTTGACGGCATTCA+AGG + chr2_3:6265052-6265071 Msa0274440:CDS 45.0%
!! TTTGGTAATGGGGGCATAGA+AGG - chr2_3:6265139-6265158 None:intergenic 45.0%
GCCATTCATGTAATCGGTTG+TGG + chr2_3:6265515-6265534 Msa0274440:CDS 45.0%
GCCACAACCGATTACATGAA+TGG - chr2_3:6265519-6265538 None:intergenic 45.0%
GCTACGAAGAAAAGACAGCA+TGG + chr2_3:6265537-6265556 Msa0274440:CDS 45.0%
AAAGACAGCATGGGGAAAAG+AGG + chr2_3:6265547-6265566 Msa0274440:CDS 45.0%
TCAAGATGCAATGTCGTGGA+TGG + chr2_3:6265720-6265739 Msa0274440:CDS 45.0%
GTTTGCACCAAGTTCTTCGA+TGG + chr2_3:6265810-6265829 Msa0274440:CDS 45.0%
CCAGCAAATCCATACCAAAG+AGG - chr2_3:6265875-6265894 None:intergenic 45.0%
CCTCTTTGGTATGGATTTGC+TGG + chr2_3:6265872-6265891 Msa0274440:CDS 45.0%
!! CTTTGGTATGGATTTGCTGG+TGG + chr2_3:6265875-6265894 Msa0274440:CDS 45.0%
GGATGTGAAAGGGTAAACGA+TGG - chr2_3:6265939-6265958 None:intergenic 45.0%
ACAATAAGCAACGAGGGGAA+GGG - chr2_3:6265960-6265979 None:intergenic 45.0%
TACAATAAGCAACGAGGGGA+AGG - chr2_3:6265961-6265980 None:intergenic 45.0%
!! AACGAGCAGTTCTGGGTAAT+TGG + chr2_3:6266378-6266397 Msa0274440:CDS 45.0%
!! CTGGGTAATTGGAGGTGTTT+CGG + chr2_3:6266389-6266408 Msa0274440:CDS 45.0%
! GCTGCTGATGATGCAGAATT+TGG + chr2_3:6266489-6266508 Msa0274440:CDS 45.0%
!! AACCTTGTTGGTGTTGTAGC+TGG + chr2_3:6266573-6266592 Msa0274440:CDS 45.0%
ATCCAGCTACAACACCAACA+AGG - chr2_3:6266578-6266597 None:intergenic 45.0%
CCCATAAGACCCTTAAGGAA+TGG - chr2_3:6266690-6266709 None:intergenic 45.0%
! CAATGGTTGGAGTACGGTTT+TGG - chr2_3:6266716-6266735 None:intergenic 45.0%
!! AAAAAAAATTGAAATATTAT+TGG - chr2_3:6261400-6261419 None:intergenic 5.0%
ACAAACACTACGTCCCTCAC+TGG - chr2_3:6261684-6261703 None:intergenic 50.0%
AGATGTGGCAATCCCTATGC+TGG + chr2_3:6261707-6261726 Msa0274440:CDS 50.0%
TGGCAATCCCTATGCTGGTA+TGG + chr2_3:6261712-6261731 Msa0274440:intron 50.0%
TGCACAGATCAGCACTTCTC+AGG + chr2_3:6262093-6262112 Msa0274440:CDS 50.0%
GATCGTCGAAATTGTGACCG+CGG - chr2_3:6262195-6262214 None:intergenic 50.0%
AGGATGTTGGACTCCATGCT+AGG + chr2_3:6262442-6262461 Msa0274440:intron 50.0%
GGAGTCTCATTTCCAGCCTT+AGG - chr2_3:6262685-6262704 None:intergenic 50.0%
AGGGAACTGATCTAACACCC+AGG - chr2_3:6263294-6263313 None:intergenic 50.0%
! TGCTTTTACGGACAGGCTCT+CGG + chr2_3:6263337-6263356 Msa0274440:CDS 50.0%
GTGTTAGCTGTGATCAACGG+CGG - chr2_3:6263612-6263631 None:intergenic 50.0%
CAAAGTCAGCTGTCTCCACA+AGG - chr2_3:6263725-6263744 None:intergenic 50.0%
TGCATAGTCCACCCTTCATC+TGG - chr2_3:6264187-6264206 None:intergenic 50.0%
!! GAAGGGTGGACTATGCAAGA+TGG + chr2_3:6264190-6264209 Msa0274440:CDS 50.0%
! CAGGTTTTCCTTGGACACAG+TGG + chr2_3:6264490-6264509 Msa0274440:intron 50.0%
AGTGGTGCTCACGACATAGA+AGG + chr2_3:6264508-6264527 Msa0274440:CDS 50.0%
GTTTCCAGAGAGAAAAGGCC+AGG + chr2_3:6264556-6264575 Msa0274440:CDS 50.0%
!! GTAACCTGGCCTTTTCTCTC+TGG - chr2_3:6264563-6264582 None:intergenic 50.0%
! CACCAGCCTTTTTGTGGTGT+TGG - chr2_3:6264585-6264604 None:intergenic 50.0%
CATCCAGTCCCCACATATAC+AGG - chr2_3:6265079-6265098 None:intergenic 50.0%
CTTTGGCAGGCTTCTTTGAG+CGG - chr2_3:6265183-6265202 None:intergenic 50.0%
!! AGCTCTGAGACATCTTTGGC+AGG - chr2_3:6265196-6265215 None:intergenic 50.0%
! TGGTGGTGTGTCTGAATCTG+CGG + chr2_3:6265469-6265488 Msa0274440:CDS 50.0%
GGATCCCTCAATGCTGATCA+AGG + chr2_3:6265490-6265509 Msa0274440:CDS 50.0%
TCCCTCAATGCTGATCAAGG+AGG + chr2_3:6265493-6265512 Msa0274440:CDS 50.0%
! GCCTCCTTGATCAGCATTGA+GGG - chr2_3:6265497-6265516 None:intergenic 50.0%
CAGCATGGGGAAAAGAGGTT+AGG + chr2_3:6265552-6265571 Msa0274440:intron 50.0%
GGGTTCAAGATGCAATGTCG+TGG + chr2_3:6265716-6265735 Msa0274440:CDS 50.0%
AGATGCAATGTCGTGGATGG+AGG + chr2_3:6265723-6265742 Msa0274440:CDS 50.0%
CCTTTGAACGCAGGCCTTAA+GGG - chr2_3:6265764-6265783 None:intergenic 50.0%
CCTTAAGGCCTGCGTTCAAA+GGG + chr2_3:6265762-6265781 Msa0274440:CDS 50.0%
CAAGAGCCCATCGAAGAACT+TGG - chr2_3:6265820-6265839 None:intergenic 50.0%
! CAAGTTCTTCGATGGGCTCT+TGG + chr2_3:6265818-6265837 Msa0274440:CDS 50.0%
! TCTGAAACTGCTGCAGAGAC+TGG + chr2_3:6265901-6265920 Msa0274440:CDS 50.0%
CCTGTGAGTAGGCAAATTGC+AGG - chr2_3:6265989-6266008 None:intergenic 50.0%
CCTGCAATTTGCCTACTCAC+AGG + chr2_3:6265986-6266005 Msa0274440:CDS 50.0%
TGACCAGTGTTCTTGAGCTG+AGG + chr2_3:6266322-6266341 Msa0274440:CDS 50.0%
TATGGCGTAACGAGCAGTTC+TGG + chr2_3:6266370-6266389 Msa0274440:CDS 50.0%
ATGGCGTAACGAGCAGTTCT+GGG + chr2_3:6266371-6266390 Msa0274440:CDS 50.0%
!! GAGCAGTTCTGGGTAATTGG+AGG + chr2_3:6266381-6266400 Msa0274440:CDS 50.0%
GAATCTTGGGGACCACTCAT+TGG + chr2_3:6266624-6266643 Msa0274440:CDS 50.0%
GATCTGTGCAGCCGTTGTTG+TGG - chr2_3:6262083-6262102 None:intergenic 55.0%
ACAGTGTCCACAGTGGACAG+TGG + chr2_3:6262474-6262493 Msa0274440:CDS 55.0%
! ATTTTGCAGGCCCTCCTCTG+AGG + chr2_3:6263079-6263098 Msa0274440:intron 55.0%
CAGGCTCTCGGCAAGGTAAT+TGG + chr2_3:6263349-6263368 Msa0274440:intron 55.0%
! ACCTTGTCAGCTTGCTCCTG+TGG + chr2_3:6263551-6263570 Msa0274440:CDS 55.0%
TCCACAGGAGCAAGCTGACA+AGG - chr2_3:6263555-6263574 None:intergenic 55.0%
CAAGATGGAACCTCTTGGCC+AGG + chr2_3:6264205-6264224 Msa0274440:CDS 55.0%
CGACCATCCTGGCATGATTC+AGG + chr2_3:6264240-6264259 Msa0274440:CDS 55.0%
! GGCTGGTGCTGAAAATGCAC+TGG + chr2_3:6264597-6264616 Msa0274440:CDS 55.0%
GGACCTGTATATGTGGGGAC+TGG + chr2_3:6265073-6265092 Msa0274440:CDS 55.0%
!! GGTAATGGGGGCATAGAAGG+TGG - chr2_3:6265136-6265155 None:intergenic 55.0%
GGCCTCCTTGATCAGCATTG+AGG - chr2_3:6265498-6265517 None:intergenic 55.0%
CCCTTAAGGCCTGCGTTCAA+AGG + chr2_3:6265761-6265780 Msa0274440:CDS 55.0%
CCCTTTGAACGCAGGCCTTA+AGG - chr2_3:6265765-6265784 None:intergenic 55.0%
CGAGGGGAAGGGATGTGAAA+GGG - chr2_3:6265949-6265968 None:intergenic 55.0%
ACGAGGGGAAGGGATGTGAA+AGG - chr2_3:6265950-6265969 None:intergenic 55.0%
CCACCTCAGCTCAAGAACAC+TGG - chr2_3:6266328-6266347 None:intergenic 55.0%
CCAGTGTTCTTGAGCTGAGG+TGG + chr2_3:6266325-6266344 Msa0274440:CDS 55.0%
GTTCTTGAGCTGAGGTGGAG+CGG + chr2_3:6266330-6266349 Msa0274440:CDS 55.0%
GGCGACCCATAAGACCCTTA+AGG - chr2_3:6266695-6266714 None:intergenic 55.0%
TTACGGACAGGCTCTCGGCA+AGG + chr2_3:6263342-6263361 Msa0274440:CDS 60.0%
CCACAGGATAGTCCACGGCA+AGG - chr2_3:6263647-6263666 None:intergenic 60.0%
! CCTTGCCGTGGACTATCCTG+TGG + chr2_3:6263644-6263663 Msa0274440:CDS 60.0%
CGTGAGCACCACTGTGTCCA+AGG - chr2_3:6264501-6264520 None:intergenic 60.0%
GCAGCTGCAGCCTCAGAGGA+GGG - chr2_3:6263092-6263111 None:intergenic 65.0%
AGCAGCTGCAGCCTCAGAGG+AGG - chr2_3:6263093-6263112 None:intergenic 65.0%
CTCAGCAGCTGCAGCCTCAG+AGG - chr2_3:6263096-6263115 None:intergenic 65.0%
!! GGCGCTGACCCTTTGAACGC+AGG - chr2_3:6265773-6265792 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 6261254 6267220 6261254 ID=Msa0274440;Name=Msa0274440
chr2_3 mRNA 6261254 6267220 6261254 ID=Msa0274440-mRNA-1;Parent=Msa0274440;Name=Msa0274440-mRNA-1;_AED=0.09;_eAED=0.09;_QI=297|1|1|1|1|1|13|363|977
chr2_3 exon 6261254 6261728 6261254 ID=Msa0274440-mRNA-1:exon:2907;Parent=Msa0274440-mRNA-1
chr2_3 exon 6262035 6262114 6262035 ID=Msa0274440-mRNA-1:exon:2908;Parent=Msa0274440-mRNA-1
chr2_3 exon 6262444 6262495 6262444 ID=Msa0274440-mRNA-1:exon:2909;Parent=Msa0274440-mRNA-1
chr2_3 exon 6262590 6262737 6262590 ID=Msa0274440-mRNA-1:exon:2910;Parent=Msa0274440-mRNA-1
chr2_3 exon 6263088 6263363 6263088 ID=Msa0274440-mRNA-1:exon:2911;Parent=Msa0274440-mRNA-1
chr2_3 exon 6263533 6263878 6263533 ID=Msa0274440-mRNA-1:exon:2912;Parent=Msa0274440-mRNA-1
chr2_3 exon 6264124 6264261 6264124 ID=Msa0274440-mRNA-1:exon:2913;Parent=Msa0274440-mRNA-1
chr2_3 exon 6264493 6264618 6264493 ID=Msa0274440-mRNA-1:exon:2914;Parent=Msa0274440-mRNA-1
chr2_3 exon 6264705 6264917 6264705 ID=Msa0274440-mRNA-1:exon:2915;Parent=Msa0274440-mRNA-1
chr2_3 exon 6265043 6265277 6265043 ID=Msa0274440-mRNA-1:exon:2916;Parent=Msa0274440-mRNA-1
chr2_3 exon 6265369 6265568 6265369 ID=Msa0274440-mRNA-1:exon:2917;Parent=Msa0274440-mRNA-1
chr2_3 exon 6265674 6266027 6265674 ID=Msa0274440-mRNA-1:exon:2918;Parent=Msa0274440-mRNA-1
chr2_3 exon 6266270 6267220 6266270 ID=Msa0274440-mRNA-1:exon:2919;Parent=Msa0274440-mRNA-1
chr2_3 five_prime_UTR 6261254 6261550 6261254 ID=Msa0274440-mRNA-1:five_prime_utr;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6261551 6261728 6261551 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6262035 6262114 6262035 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6262444 6262495 6262444 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6262590 6262737 6262590 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6263088 6263363 6263088 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6263533 6263878 6263533 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6264124 6264261 6264124 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6264493 6264618 6264493 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6264705 6264917 6264705 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6265043 6265277 6265043 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6265369 6265568 6265369 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6265674 6266027 6265674 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 CDS 6266270 6266857 6266270 ID=Msa0274440-mRNA-1:cds;Parent=Msa0274440-mRNA-1
chr2_3 three_prime_UTR 6266858 6267220 6266858 ID=Msa0274440-mRNA-1:three_prime_utr;Parent=Msa0274440-mRNA-1
Gene Sequence

>Msa0274440

ATGATGGAATCTGGAGTTAGCTTTTGTAACTCTTGTGGTGAACAAGTTGGAGTTGATGCTAATGGAGAGGTGTTTGTGGCTTGTCATGAGTGTTATTTCCCAATTTGTAAGGCTTGTGTTGATTATGAAACCAGTGAGGGACGTAGTGTTTGTTTGAGATGTGGCAATCCCTATGCTGATAGAACAAGAGGTAAGGATGACACCAAAGTTCCTGCAAATCAATCCACAACAACGGCTGCACAGATCAGCACTTCTCAGGATGTTGGACTCCATGCTAGGCATATCAGTACAGTGTCCACAGTGGACAGTGAATTAAATGATGAGTCTGGGAATCCTATCTGGAAAAATAGAGTGGAAAGTTGGAAGGAGAAGGACAAAAAGAACAAGAAGAAAAAGGAAGCACCTAAGGCTGGAAATGAGACTCCAGTTCCACATGAACAGCAGATGGATGAAATGCAGCCCTCCTCTGAGGCTGCAGCTGCTGAGCCACTTTCAGTGATAATTCCAGTCTCAAAATCGAAACTTGGACCATACAGAACTGTTATAATCATGCGGCTCGTAATATTGGGTCTGTTTTTCCATTATAGAGTTACACATCCAGTTGATAGTGCTTTTGGTCTGTGGTTGACATCTATCATCTGTGAGATCTGGTTTGCTTTTTCCTGGGTGTTAGATCAGTTCCCTAAATGGTCTCCTATCAATAGGGTTGCTTTTACGGACAGGCTCTCGGCAAGGTTTGAAAGAGAGGGTGAACCTTGTCAGCTTGCTCCTGTGGATTTCTTTGTCAGTACAGTTGATCCGTTGAAAGAACCGCCGTTGATCACAGCTAACACAGTTCTTTCTATCCTTGCCGTGGACTATCCTGTGGAAAAAGTATCATGTTATGTTTCAGATGATGGTGCTGCAATGCTGACATTTGAATCCCTTGTGGAGACAGCTGACTTTGCAAGAAAGTGGGTTCCATTTTGCAAAAAGTTTGAGATTGAACCACGTGCACCTGAGTTTTACTTCTCTCAGAAGATTGACTATTTGAAGGACAAAGTTCAACCTTCTTTTGTGAAGGAACGTAGAGCAATGAAAAGAGAATATGAAGAGTATAAAGTCAGAGTTAATGCTTTGGTAGCTAAGGCTCAGAAAACACCAGATGAAGGGTGGACTATGCAAGATGGAACCTCTTGGCCAGGAAATAATTCACGCGACCATCCTGGCATGATTCAGGTTTTCCTTGGACACAGTGGTGCTCACGACATAGAAGGAAACGAACTTCCAAGGTTGGTCTATGTTTCCAGAGAGAAAAGGCCAGGTTACCAACACCACAAAAAGGCTGGTGCTGAAAATGCACTGGTGAGGGTGTCTGCAGTTCTCACAAACGCTCCCTACATTCTCAATCTTGACTGTGATCATTATGTTAACAATAGCAAGGCTGTTCGAGAAGCGATGTGTTTTCTGATGGATCCAGTAGTCGGTAGAGATGTTTGTTATGTGCAGTTCCCCCAAAGATTTGATGGTATTGATCGTAGTGATCGATATGCCAACCGGAACACAGTTTTCTTCGATGTTAATATGAAAGGACTTGACGGCATTCAAGGACCTGTATATGTGGGGACTGGATGTGTTTTCAATCGACAAGCGCTTTATGGATACAGTCCACCTTCTATGCCCCCATTACCAAAATCTTCATCTTGCTGTTGCTTCCGCTCAAAGAAGCCTGCCAAAGATGTCTCAGAGCTTTATAAAGATGCAAAGAGGGAAGAGCTTGATGCTGCTATTTTTAATCTCAGGGAGATTGAGAACTATGATGAGTATGAGAGGTCAATGCTTATTTCACAACTTAGCTTTGAAAAAACATTTGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAATGGTGGTGTGTCTGAATCTGCGGATCCCTCAATGCTGATCAAGGAGGCCATTCATGTAATCGGTTGTGGCTACGAAGAAAAGACAGCATGGGGAAAAGAGATTGGTTGGATATATGGTTCAGTGACTGAGGATATCTTAACGGGGTTCAAGATGCAATGTCGTGGATGGAGGTCAATTTACTGCATGCCCTTAAGGCCTGCGTTCAAAGGGTCAGCGCCAATCAATCTTTCCGATCGTTTGCACCAAGTTCTTCGATGGGCTCTTGGATCAGTTGAAATTTTCCTTAGTAGACATTGTCCTCTTTGGTATGGATTTGCTGGTGGTCGTCTGAAACTGCTGCAGAGACTGGCTTATATAAACACCATCGTTTACCCTTTCACATCCCTTCCCCTCGTTGCTTATTGTACTTTGCCTGCAATTTGCCTACTCACAGGAAAATTCATCATACCAACGCTATCAAACATTGCAAGTGCACTTTTTCTTGGACTTTTCATCTCTATTATATTGACCAGTGTTCTTGAGCTGAGGTGGAGCGGTGTTACCATAGAAGATTTATGGCGTAACGAGCAGTTCTGGGTAATTGGAGGTGTTTCGGCTCATCTTTTTGCTGTCTTCCAAGGATTCCTAAAGATGTTAGCAGGTGTTGACACAAACTTCACTGTGACAGCAAAAGCTGCTGATGATGCAGAATTTGGTGAACTATATATGATCAAATGGACAACACTCTTAATTCCTCCAACAAGTCTTATCATTATTAACCTTGTTGGTGTTGTAGCTGGATTTTCTGATGCACTTAATGGTGGATATGAATCTTGGGGACCACTCATTGGAAAAGTTTTCTTCGCATTTTGGGTGATTTTTCATCTTTATCCATTCCTTAAGGGTCTTATGGGTCGCCAAAACCGTACTCCAACCATTGTTATTCTTTGGTCAGTGCTTTTGGCTTCTGTCTTCTCACTTGTTTGGGTTAAGATTAATCCATTTGTGAGCAAAGTTGATAGTTCAGCTATTTCTCAGACTTGTATTTCTATTGATTGTTAA
Protein sequence

>Msa0274440

MMESGVSFCNSCGEQVGVDANGEVFVACHECYFPICKACVDYETSEGRSVCLRCGNPYADRTRGKDDTKVPANQSTTTAAQISTSQDVGLHARHISTVSTVDSELNDESGNPIWKNRVESWKEKDKKNKKKKEAPKAGNETPVPHEQQMDEMQPSSEAAAAEPLSVIIPVSKSKLGPYRTVIIMRLVILGLFFHYRVTHPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWSPINRVAFTDRLSARFEREGEPCQLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFEIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKREYEEYKVRVNALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGHSGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYSPPSMPPLPKSSSCCCFRSKKPAKDVSELYKDAKREELDAAIFNLREIENYDEYERSMLISQLSFEKTFGLSTVFIESTLMENGGVSESADPSMLIKEAIHVIGCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNIASALFLGLFISIILTSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMIKWTTLLIPPTSLIIINLVGVVAGFSDALNGGYESWGPLIGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFVSKVDSSAISQTCISIDC*