AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0235710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0235710 MtrunA17_Chr2g0284211 99.387 979 4 1 1 977 1 979 0.0 2019
Msa0235710 MtrunA17_Chr8g0379241 81.864 998 153 8 1 977 1 991 0.0 1652
Msa0235710 MtrunA17_Chr2g0296991 65.098 1020 293 14 3 970 31 1039 0.0 1325
Msa0235710 MtrunA17_Chr4g0073711 63.221 1006 303 8 9 963 37 1026 0.0 1311
Msa0235710 MtrunA17_Chr3g0088821 66.631 929 280 12 75 977 154 1078 0.0 1263
Msa0235710 MtrunA17_Chr3g0137951 66.810 931 281 13 70 977 162 1087 0.0 1261
Msa0235710 MtrunA17_Chr8g0383701 67.010 873 259 8 110 962 220 1083 0.0 1243
Msa0235710 MtrunA17_Chr8g0352231 67.861 893 263 11 101 977 194 1078 0.0 1233
Msa0235710 MtrunA17_Chr1g0201731 67.281 868 262 6 110 964 228 1086 0.0 1233
Msa0235710 MtrunA17_Chr1g0183381 66.994 815 250 5 158 970 102 899 0.0 1169
Msa0235710 MtrunA17_Chr3g0078671 55.294 1020 396 10 9 977 39 1049 0.0 1157
Msa0235710 MtrunA17_Chr7g0267731 64.834 873 279 7 110 963 111 974 0.0 1152
Msa0235710 MtrunA17_Chr8g0364641 54.359 975 405 14 9 974 37 980 0.0 1122
Msa0235710 MtrunA17_Chr4g0039801 45.437 1030 446 21 12 958 132 1128 0.0 858
Msa0235710 MtrunA17_Chr5g0410641 44.104 1043 446 18 10 958 108 1107 0.0 848
Msa0235710 MtrunA17_Chr7g0269741 48.594 889 359 16 151 958 285 1156 0.0 817
Msa0235710 MtrunA17_Chr1g0165411 43.398 1030 447 21 7 958 118 1089 0.0 808
Msa0235710 MtrunA17_Chr1g0165421 43.528 1043 466 20 7 967 125 1126 0.0 803
Msa0235710 MtrunA17_Chr2g0297351 46.871 879 359 16 162 958 158 1010 0.0 782
Msa0235710 MtrunA17_Chr7g0274751 42.353 850 307 17 162 966 95 806 0.0 607
Msa0235710 MtrunA17_Chr2g0322361 33.771 761 413 15 208 949 52 740 6.53e-130 410
Msa0235710 MtrunA17_Chr3g0102531 34.588 691 359 14 178 859 21 627 1.02e-128 406
Msa0235710 MtrunA17_Chr2g0322371 33.595 765 410 17 208 954 47 731 4.75e-127 402
Msa0235710 MtrunA17_Chr3g0102541 34.421 674 350 13 195 859 38 628 3.91e-125 397
Msa0235710 MtrunA17_Chr4g0046401 32.579 795 442 17 170 949 15 730 9.31e-125 396
Msa0235710 MtrunA17_Chr2g0322351 34.383 762 422 18 195 949 37 727 8.27e-124 394
Msa0235710 MtrunA17_Chr1g0186381 31.158 812 449 17 155 944 2 725 4.06e-120 384
Msa0235710 MtrunA17_Chr4g0025201 32.710 749 415 17 195 928 37 711 1.88e-118 380
Msa0235710 MtrunA17_Chr3g0095791 28.794 771 447 14 172 933 12 689 1.07e-106 347
Msa0235710 MtrunA17_Chr2g0307191 29.188 764 442 13 179 934 19 691 3.59e-104 340
Msa0235710 MtrunA17_Chr2g0298581 29.528 762 440 14 179 933 19 690 5.81e-103 337
Msa0235710 MtrunA17_Chr3g0077511 27.451 765 456 12 179 934 19 693 1.96e-95 317
Msa0235710 MtrunA17_Chr3g0102551 39.552 402 208 10 166 547 7 393 1.84e-88 299
Msa0235710 MtrunA17_Chr3g0102551 30.719 306 195 7 653 946 429 729 8.34e-35 142
Msa0235710 MtrunA17_Chr2g0322341 42.006 319 171 6 195 513 39 343 1.08e-77 258
Msa0235710 MtrunA17_Chr2g0322331 30.163 368 241 7 594 949 8 371 6.96e-48 175
Msa0235710 MtrunA17_Chr3g0126641 44.240 217 90 5 489 686 6 210 1.33e-45 163
Msa0235710 MtrunA17_Chr0c03g0490021 63.934 122 43 1 806 926 1 122 9.46e-44 155
Msa0235710 MtrunA17_Chr2g0307241 33.163 196 111 3 179 374 19 194 5.00e-29 115
Msa0235710 MtrunA17_Chr7g0252781 60.000 85 33 1 893 977 6 89 3.21e-27 106
Msa0235710 MtrunA17_Chr8g0355061 77.778 54 12 0 806 859 1 54 2.53e-24 96.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0235710 AT4G18780.1 82.132 985 168 3 1 977 1 985 0.0 1674
Msa0235710 AT5G44030.1 63.163 1037 304 13 9 977 23 1049 0.0 1320
Msa0235710 AT5G17420.1 63.101 1019 297 11 7 974 35 1025 0.0 1311
Msa0235710 AT5G44030.2 61.568 1059 314 10 9 977 23 1078 0.0 1311
Msa0235710 AT5G05170.1 61.392 1049 318 14 9 974 20 1064 0.0 1292
Msa0235710 AT2G25540.1 61.667 1020 318 15 9 961 33 1046 0.0 1289
Msa0235710 AT4G32410.1 61.725 1032 310 13 9 960 39 1065 0.0 1286
Msa0235710 AT5G64740.1 57.696 1059 344 12 9 977 39 1083 0.0 1253
Msa0235710 AT2G21770.1 66.104 888 268 10 110 977 212 1086 0.0 1235
Msa0235710 AT5G09870.1 64.892 883 280 9 110 977 201 1068 0.0 1224
Msa0235710 AT4G39350.1 66.282 866 276 5 110 962 208 1070 0.0 1204
Msa0235710 AT5G44030.3 72.021 772 174 6 245 977 2 770 0.0 1159
Msa0235710 AT5G16910.1 44.831 1035 447 21 12 958 133 1131 0.0 836
Msa0235710 AT3G03050.1 44.306 1045 436 21 12 958 135 1131 0.0 834
Msa0235710 AT1G02730.1 44.553 1019 460 19 30 964 177 1174 0.0 814
Msa0235710 AT4G38190.1 43.520 1034 438 22 11 958 119 1092 0.0 806
Msa0235710 AT2G33100.2 47.026 891 368 16 162 969 166 1035 0.0 795
Msa0235710 AT2G33100.1 47.026 891 368 16 162 969 166 1035 0.0 795
Msa0235710 AT1G32180.1 47.586 870 369 16 164 956 107 966 0.0 784
Msa0235710 AT1G32180.2 47.586 870 369 16 164 956 107 966 0.0 784
Msa0235710 AT2G32530.1 33.043 805 416 24 183 949 24 743 1.41e-118 380
Msa0235710 AT2G32610.1 32.120 797 437 23 186 949 27 752 4.06e-118 379
Msa0235710 AT2G32540.1 32.010 781 421 18 207 954 50 753 4.95e-116 374
Msa0235710 AT2G32620.1 32.979 752 405 17 207 930 50 730 1.92e-115 372
Msa0235710 AT4G15320.3 32.950 783 415 22 179 927 23 729 8.09e-114 368
Msa0235710 AT4G15320.5 32.950 783 415 22 179 927 23 729 1.20e-113 367
Msa0235710 AT4G15320.4 32.456 798 414 23 179 927 23 744 1.17e-109 357
Msa0235710 AT2G32620.3 36.034 580 302 12 207 781 50 565 1.01e-108 350
Msa0235710 AT4G15290.1 32.357 751 409 20 206 928 49 728 4.72e-107 350
Msa0235710 AT2G32620.4 33.143 700 371 17 261 930 2 634 6.40e-104 339
Msa0235710 AT4G15320.2 32.297 740 359 20 179 863 23 675 5.45e-102 337
Msa0235710 AT2G32620.2 35.379 554 287 11 207 755 50 537 1.78e-99 323
Msa0235710 AT4G15320.1 30.612 784 357 22 179 863 23 718 1.12e-93 316
Msa0235710 AT1G55850.1 40.547 402 219 8 150 547 6 391 1.26e-84 288
Msa0235710 AT1G55850.1 31.098 328 197 9 634 946 406 719 3.71e-34 141
Msa0235710 AT4G24010.1 39.594 394 204 11 177 558 25 396 1.50e-78 272
Msa0235710 AT4G24010.1 34.831 267 166 2 647 907 419 683 5.16e-40 159
Msa0235710 AT4G24000.1 37.330 442 235 15 152 581 1 412 2.71e-76 265
Msa0235710 AT4G24000.1 30.539 334 214 6 629 950 387 714 1.63e-40 160
Msa0235710 AT4G23990.1 37.949 390 216 8 177 558 44 415 5.10e-74 259
Msa0235710 AT4G23990.1 32.258 310 196 4 628 930 419 721 1.61e-41 164
Msa0235710 AT4G23990.2 32.258 310 196 4 628 930 205 507 1.23e-41 161
Msa0235710 AT4G23990.2 42.857 203 105 5 363 558 3 201 3.44e-38 151
Msa0235710 AT4G24000.2 42.544 228 112 8 363 581 3 220 1.80e-41 160
Msa0235710 AT4G24000.2 32.740 281 178 3 643 917 213 488 7.39e-41 159

Find 244 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCGACAAGCGCTTTA+TGG 0.152250 2_2:-8575786 Msa0235710:CDS
TCCATTCCTTAAGGGTCTTA+TGG 0.193420 2_2:-8574191 Msa0235710:CDS
GTTAAGGGTCATAGAGTTTA+TGG 0.197162 2_2:-8579515 Msa0235710:five_prime_UTR
TCAACACAAGCCTTACAAAT+TGG 0.207367 2_2:+8579368 None:intergenic
ATCTATAACCAGTCAATTAT+TGG 0.214723 2_2:+8573816 None:intergenic
CTTCTGTCTTCTCACTTGTT+TGG 0.216156 2_2:-8574117 Msa0235710:CDS
AATCATGCGGCTCGTAATAT+TGG 0.216166 2_2:-8577714 Msa0235710:CDS
CAACAACAAGATGAAGATTT+TGG 0.225152 2_2:+8575735 None:intergenic
TTTGATCATATGTTATGATA+TGG 0.240907 2_2:-8573985 Msa0235710:three_prime_UTR
TATTCTTTGGTCAGTGCTTT+TGG 0.244414 2_2:-8574140 Msa0235710:CDS
GTGTTACCATAGAAGATTTA+TGG 0.252451 2_2:-8574525 Msa0235710:CDS
TTCTGTCTTCTCACTTGTTT+GGG 0.253330 2_2:-8574116 Msa0235710:CDS
CTCCAACCATTGTTATTCTT+TGG 0.254720 2_2:-8574153 Msa0235710:CDS
CCTCTTTGGTATGGATTTGC+TGG 0.259446 2_2:-8575017 Msa0235710:CDS
GAGTATAGTTTGAGAAGTTA+AGG 0.269367 2_2:-8579531 Msa0235710:five_prime_UTR
CATCCAGTTGATAGTGCTTT+TGG 0.274318 2_2:-8577665 Msa0235710:CDS
CAATGGTTGGAGTACGGTTT+TGG 0.275754 2_2:+8574164 None:intergenic
GATCAATACCATCAAATCTT+TGG 0.280002 2_2:+8576035 None:intergenic
TATGGCGTAACGAGCAGTTC+TGG 0.280519 2_2:-8574507 Msa0235710:CDS
ATTCAGATTGGTTGGATATA+TGG 0.285850 2_2:-8575221 Msa0235710:intron
TTAGTAGACATTGTCCTCTT+TGG 0.288789 2_2:-8575031 Msa0235710:CDS
CTATTGATAGGAGACCATTT+AGG 0.297079 2_2:+8577578 None:intergenic
AACGAGCAGTTCTGGGTAAT+TGG 0.298572 2_2:-8574499 Msa0235710:CDS
CCATTCCTTAAGGGTCTTAT+GGG 0.301598 2_2:-8574190 Msa0235710:CDS
ATCAATACCATCAAATCTTT+GGG 0.308914 2_2:+8576036 None:intergenic
TCCATCTAATTCTTCCCTTA+AGG 0.311245 2_2:-8579599 Msa0235710:five_prime_UTR
TCATCTTTATCCATTCCTTA+AGG 0.313408 2_2:-8574200 Msa0235710:CDS
CAACACCTGCTAACATCTTT+AGG 0.317097 2_2:+8574437 None:intergenic
CGACCATCCTGGCATGATTC+AGG 0.317609 2_2:-8576649 Msa0235710:intron
TTTCATTGAATCTACACTAA+TGG 0.318286 2_2:-8575447 Msa0235710:CDS
CATCTTTATCCATTCCTTAA+GGG 0.318968 2_2:-8574199 Msa0235710:CDS
CTGGATGTGTAACTCTATAA+TGG 0.320127 2_2:+8577681 None:intergenic
GTAGAATTAAATGATGAGTC+TGG 0.321242 2_2:-8578303 Msa0235710:intron
CTAAATGGTCTCCTATCAAT+AGG 0.324805 2_2:-8577577 Msa0235710:CDS
ATAAAGCTCTGAGACATCTT+TGG 0.326451 2_2:+8575692 None:intergenic
CTTATCATTATTAACCTTGT+TGG 0.328983 2_2:-8574316 Msa0235710:CDS
CCCTTTGAATGCAGGCCTTA+AGG 0.329006 2_2:+8575127 None:intergenic
CCTTTGAATGCAGGCCTTAA+GGG 0.330367 2_2:+8575128 None:intergenic
ATGAGTCTGGGAATCCTATC+TGG 0.333861 2_2:-8578290 Msa0235710:CDS
TATTGATAGGAGACCATTTA+GGG 0.334357 2_2:+8577579 None:intergenic
GCTGCTGATGATGCAGAATT+TGG 0.338469 2_2:-8574388 Msa0235710:CDS
CAATTTACTGCATGCCCTTA+AGG 0.340923 2_2:-8575142 Msa0235710:CDS
TGTTAGATCAGTTCCCTAAA+TGG 0.342957 2_2:-8577592 Msa0235710:CDS
CAAGTTCTTCGATGGGCTCT+TGG 0.344057 2_2:-8575071 Msa0235710:CDS
CTGGGTAATTGGAGGTGTTT+CGG 0.353068 2_2:-8574488 Msa0235710:CDS
TGGTCGCGTGAATTATTTCC+TGG 0.359437 2_2:+8576666 None:intergenic
GTTGTTGTGGATTGATTTGC+AGG 0.367203 2_2:+8578824 None:intergenic
GTTACGCCATAAATCTTCTA+TGG 0.368229 2_2:+8574519 None:intergenic
GTCAATGAAGCAATCCTTAA+GGG 0.371344 2_2:+8579585 None:intergenic
AGTATAGTTTGAGAAGTTAA+GGG 0.375942 2_2:-8579530 Msa0235710:five_prime_UTR
TTTGTTTATGTCCAACTTCA+AGG 0.377580 2_2:+8579491 None:intergenic
CTATCAACTTTGCTCACAAA+TGG 0.379764 2_2:+8574082 None:intergenic
CAAGGTAGATAACATGAGTA+TGG 0.387523 2_2:+8573716 None:intergenic
AGGTTACCAACACCACAAAA+AGG 0.388733 2_2:-8576313 Msa0235710:CDS
CCTGTGAGTAGGCAAATTGC+AGG 0.391040 2_2:+8574903 None:intergenic
TGGTGAAGGTGATTGTAGTA+TGG 0.392162 2_2:+8579641 None:intergenic
TTAATAATGATAAGACTTGT+TGG 0.397569 2_2:+8574325 None:intergenic
CTAACATCTTTAGGAATCCT+TGG 0.400962 2_2:+8574446 None:intergenic
TCAGAAGATTGACTATTTGA+AGG 0.405314 2_2:-8577077 Msa0235710:CDS
TGCATAGTCCACCCTTCATC+TGG 0.405419 2_2:+8576705 None:intergenic
AGCAGCTGCAGCCTCAGAGG+AGG 0.406357 2_2:+8577799 None:intergenic
ATCTGCTGTTCATGTGGAAC+TGG 0.406720 2_2:+8578186 None:intergenic
TAATGGTGGATATGAATCTT+GGG 0.406813 2_2:-8574266 Msa0235710:CDS
GTGACTGAGGATATCTTAAC+GGG 0.408774 2_2:-8575194 Msa0235710:CDS
AGTCAATGAAGCAATCCTTA+AGG 0.413983 2_2:+8579584 None:intergenic
CAACACAAGCCTTACAAATT+GGG 0.414895 2_2:+8579369 None:intergenic
AACCTTGTTGGTGTTGTAGC+TGG 0.415993 2_2:-8574304 Msa0235710:CDS
ATCATGCGGCTCGTAATATT+GGG 0.418633 2_2:-8577713 Msa0235710:CDS
CAAACATCTCTACCGACTAC+TGG 0.423618 2_2:+8576073 None:intergenic
TCTGAAACTGCTGCAGAGAC+TGG 0.423797 2_2:-8574988 Msa0235710:CDS
CATCTATCATCTGTGAGATC+TGG 0.425614 2_2:-8577631 Msa0235710:CDS
GTGTTATTTCCCAATTTGTA+AGG 0.426117 2_2:-8579378 Msa0235710:CDS
TTAATGGTGGATATGAATCT+TGG 0.430333 2_2:-8574267 Msa0235710:CDS
AGACATTGTCCTCTTTGGTA+TGG 0.435333 2_2:-8575026 Msa0235710:CDS
GAATCTTGGGGACCACTCAT+TGG 0.440256 2_2:-8574253 Msa0235710:CDS
GCCTCCTTGATCAGCATTGA+GGG 0.442247 2_2:+8575395 None:intergenic
CCAGTCTCAAAATCGAAACT+TGG 0.446012 2_2:-8577755 Msa0235710:CDS
GGCGACCCATAAGACCCTTA+AGG 0.446918 2_2:+8574185 None:intergenic
TACAATAAGCAACGAGGGGA+AGG 0.448543 2_2:+8574931 None:intergenic
CTACGTTCCTTCACAAAAGA+AGG 0.451548 2_2:+8577043 None:intergenic
GGAGTCTCATTTCCAGCCTT+AGG 0.452035 2_2:+8578207 None:intergenic
GGCGCTGACCCTTTGAATGC+AGG 0.456625 2_2:+8575119 None:intergenic
GTGAACTATATATGATCAAA+TGG 0.460410 2_2:-8574366 Msa0235710:CDS
AAGGAGGCCATTCATGTAAT+CGG 0.462285 2_2:-8575380 Msa0235710:CDS
CTCAGCAGCTGCAGCCTCAG+AGG 0.463990 2_2:+8577796 None:intergenic
TGCTAATGGAGAGGTGTTTG+TGG 0.464871 2_2:-8579411 Msa0235710:CDS
CCCTTAAGGCCTGCATTCAA+AGG 0.466918 2_2:-8575128 Msa0235710:CDS
AGACCAAAAGCACTATCAAC+TGG 0.467986 2_2:+8577662 None:intergenic
CATCCAGTCCCCACATATAC+AGG 0.468316 2_2:+8575813 None:intergenic
AAAGGACTTGACGGCATTCA+AGG 0.471693 2_2:-8575837 Msa0235710:CDS
GTAAAAGCAACCCTATTGAT+AGG 0.471729 2_2:+8577566 None:intergenic
TGCACAGATCAGCACTTCTC+AGG 0.471880 2_2:-8578798 Msa0235710:intron
ATAACATATGATCAAAACTT+TGG 0.473160 2_2:+8573992 None:intergenic
ATGGCGTAACGAGCAGTTCT+GGG 0.474093 2_2:-8574506 Msa0235710:CDS
CAAGTTGGAGTTGATGCTAA+TGG 0.475260 2_2:-8579425 Msa0235710:CDS
ATCAACGGCGGTTCTTTCAA+CGG 0.476719 2_2:+8577292 None:intergenic
ACCTTGTCAGCTTGCTCCTG+TGG 0.476795 2_2:-8577338 Msa0235710:CDS
TATTGTGTATTCAGATTGGT+TGG 0.477209 2_2:-8575229 Msa0235710:intron
CAGCTGACTTTGCAAGAAAG+TGG 0.477475 2_2:-8577156 Msa0235710:CDS
GTTTGCACCAAGTTCTTCGA+TGG 0.479288 2_2:-8575079 Msa0235710:CDS
AGTGGTGCTCACGACATAGA+AGG 0.480957 2_2:-8576381 Msa0235710:CDS
CAAGAGCCCATCGAAGAACT+TGG 0.484396 2_2:+8575072 None:intergenic
TAGAATTAAATGATGAGTCT+GGG 0.484813 2_2:-8578302 Msa0235710:CDS
ACTTTGGCAAGCACAATTGT+TGG 0.485186 2_2:+8574008 None:intergenic
GCCATTCATGTAATCGGTTG+TGG 0.485828 2_2:-8575374 Msa0235710:CDS
CATCGAAGAAAACTGTGTTC+CGG 0.486357 2_2:+8575993 None:intergenic
TAAATGGTCTCCTATCAATA+GGG 0.487621 2_2:-8577576 Msa0235710:CDS
TCCTTAAGGGAAGAATTAGA+TGG 0.490546 2_2:+8579598 None:intergenic
AAACGATCGGAAAGATTGAT+TGG 0.491570 2_2:+8575098 None:intergenic
GAGTTTATGGTCCTTGAAGT+TGG 0.492514 2_2:-8579502 Msa0235710:five_prime_UTR
GTTTCCAGAGAGAAAAGGCC+AGG 0.493523 2_2:-8576333 Msa0235710:CDS
CAGTCAAGATTGAGAATGTA+GGG 0.493558 2_2:+8576154 None:intergenic
GCAGCTGCAGCCTCAGAGGA+GGG 0.494418 2_2:+8577800 None:intergenic
AGTGGAAAGTTGGAAGGAGA+AGG 0.496844 2_2:-8578259 Msa0235710:CDS
TCATGTTATGTTTCAGATGA+TGG 0.497524 2_2:-8577214 Msa0235710:CDS
GTTAATATGAAAGGACTTGA+CGG 0.500626 2_2:-8575846 Msa0235710:CDS
GACCAAAGAATAACAATGGT+TGG 0.504983 2_2:+8574151 None:intergenic
CATTCAAGGACCTGTATATG+TGG 0.505545 2_2:-8575823 Msa0235710:CDS
AGTTAATGCTTTGGTAGCTA+AGG 0.507653 2_2:-8576739 Msa0235710:CDS
GGATCCCTCAATGCTGATCA+AGG 0.508828 2_2:-8575399 Msa0235710:CDS
GGATTGATTTGCAGGAACTT+TGG 0.512377 2_2:+8578832 None:intergenic
AATAATTCACGCGACCATCC+TGG 0.512735 2_2:-8576660 Msa0235710:CDS
TAAAGTCAGAGTTAATGCTT+TGG 0.514285 2_2:-8576748 Msa0235710:CDS
AGTGACTGAGGATATCTTAA+CGG 0.514913 2_2:-8575195 Msa0235710:CDS
AATTGAAATATTATTGGTGA+AGG 0.515318 2_2:+8579627 None:intergenic
CCAGTGTTCTTGAGCTGAGG+TGG 0.517435 2_2:-8574552 Msa0235710:CDS
CCTGCAATTTGCCTACTCAC+AGG 0.518245 2_2:-8574903 Msa0235710:CDS
GAATAACAATGGTTGGAGTA+CGG 0.518540 2_2:+8574158 None:intergenic
TGTAGATAGAACAAGAGGTA+AGG 0.518619 2_2:-8578861 Msa0235710:intron
TGAAGGTGATTGTAGTATGG+TGG 0.519367 2_2:+8579644 None:intergenic
AAGAACTTGGTGCAAACGAT+CGG 0.519660 2_2:+8575085 None:intergenic
ACAGTCAAGATTGAGAATGT+AGG 0.519877 2_2:+8576153 None:intergenic
AAAGAGGACAATGTCTACTA+AGG 0.520358 2_2:+8575033 None:intergenic
GCTCAGAAAACACCAGATGA+AGG 0.520957 2_2:-8576717 Msa0235710:CDS
CAAGATGGAACCTCTTGGCC+AGG 0.521330 2_2:-8576684 Msa0235710:CDS
ACTTGCATTATGTAGGATGT+TGG 0.524011 2_2:-8578460 Msa0235710:intron
AGCTCTGAGACATCTTTGGC+AGG 0.529462 2_2:+8575696 None:intergenic
ATGATTATAACAGTTCTGTA+TGG 0.530674 2_2:+8577731 None:intergenic
CCATGTCAGGTTTGAAAGAG+AGG 0.530844 2_2:-8577365 Msa0235710:intron
TCATCCATCTGCTGTTCATG+TGG 0.531385 2_2:+8578180 None:intergenic
GCCACAACCGATTACATGAA+TGG 0.535283 2_2:+8575373 None:intergenic
CTGGAAACATAGACCAACCT+TGG 0.535961 2_2:+8576348 None:intergenic
CCCATAAGACCCTTAAGGAA+TGG 0.536403 2_2:+8574190 None:intergenic
GGATTCCTAAAGATGTTAGC+AGG 0.539539 2_2:-8574442 Msa0235710:CDS
TTTGCACCAAGTTCTTCGAT+GGG 0.539861 2_2:-8575078 Msa0235710:CDS
AAAGACAGCATGGGGAAAAG+AGG 0.541039 2_2:-8575342 Msa0235710:intron
CTTTGGCAGGCTTCTTTGAG+CGG 0.542540 2_2:+8575709 None:intergenic
CTATGCAAGATGGAACCTCT+TGG 0.544549 2_2:-8576689 Msa0235710:CDS
CGTGAGCACCACTGTGTCCA+AGG 0.546803 2_2:+8576391 None:intergenic
TCAAGATGCAATGTCGTGGA+TGG 0.547900 2_2:-8575169 Msa0235710:CDS
AGATGTGGCAATCCCTATGC+TGG 0.550041 2_2:-8579311 Msa0235710:intron
GAATCTACACTAATGGAGAA+TGG 0.550905 2_2:-8575440 Msa0235710:CDS
TAAAGAGACCAATAATTGAC+TGG 0.552549 2_2:-8573824 Msa0235710:three_prime_UTR
TAGTGTTACCATACCAGCAT+AGG 0.558357 2_2:+8579298 None:intergenic
AAATAGAGTGGAAAGTTGGA+AGG 0.558941 2_2:-8578265 Msa0235710:CDS
CAAAGTCAGCTGTCTCCACA+AGG 0.559322 2_2:+8577167 None:intergenic
AGCTGACTTTGCAAGAAAGT+GGG 0.560279 2_2:-8577155 Msa0235710:CDS
CCTTAAGGCCTGCATTCAAA+GGG 0.561090 2_2:-8575127 Msa0235710:CDS
CGAGGGGAAGGGATGTGAAA+GGG 0.562379 2_2:+8574943 None:intergenic
GGCTGGTGCTGAAAATGCAC+TGG 0.563372 2_2:-8576292 Msa0235710:intron
GGCCTCCTTGATCAGCATTG+AGG 0.563747 2_2:+8575394 None:intergenic
ACATTTCAGGTTAATATGAA+AGG 0.564196 2_2:-8575855 Msa0235710:intron
GCTTTATAAAGATGCAAAGA+GGG 0.565584 2_2:-8575676 Msa0235710:CDS
ACGAGGGGAAGGGATGTGAA+AGG 0.568075 2_2:+8574942 None:intergenic
AGGAAACGAACTTCCAAGGT+TGG 0.569266 2_2:-8576361 Msa0235710:CDS
CTTTGGTATGGATTTGCTGG+TGG 0.569669 2_2:-8575014 Msa0235710:CDS
AGATATACCTGAATCATGCC+AGG 0.571408 2_2:+8576642 None:intergenic
TAGAAGGAAACGAACTTCCA+AGG 0.571501 2_2:-8576365 Msa0235710:CDS
GTAGTGATCGATATGCCAAC+CGG 0.572003 2_2:-8576012 Msa0235710:CDS
GAAGGTGATTGTAGTATGGT+GGG 0.574818 2_2:+8579645 None:intergenic
ACTGGAATTATCACTGAAAG+TGG 0.576761 2_2:+8577773 None:intergenic
TCCACAGGAGCAAGCTGACA+AGG 0.577378 2_2:+8577337 None:intergenic
AGATGCAATGTCGTGGATGG+AGG 0.581673 2_2:-8575166 Msa0235710:CDS
AGTTCCACATGAACAGCAGA+TGG 0.583014 2_2:-8578184 Msa0235710:CDS
AACTCTTGTGGTGAACAAGT+TGG 0.583291 2_2:-8579440 Msa0235710:CDS
CTCAGAAAACACCAGATGAA+GGG 0.585547 2_2:-8576716 Msa0235710:CDS
GAGCAGTTCTGGGTAATTGG+AGG 0.587105 2_2:-8574496 Msa0235710:CDS
TTACGGACAGGCTCTCGGCA+AGG 0.587814 2_2:-8577547 Msa0235710:intron
ATTCAAGGACCTGTATATGT+GGG 0.589043 2_2:-8575822 Msa0235710:CDS
GATCTGTGCAGCCGTTGTTG+TGG 0.589939 2_2:+8578811 None:intergenic
GGACCTGTATATGTGGGGAC+TGG 0.590486 2_2:-8575816 Msa0235710:CDS
CATGTCAGGTTTGAAAGAGA+GGG 0.592103 2_2:-8577364 Msa0235710:intron
TCTATGTTTCCAGAGAGAAA+AGG 0.594564 2_2:-8576338 Msa0235710:CDS
TTCTGAGAGAAGTAAAACTC+AGG 0.597805 2_2:+8577094 None:intergenic
ATAATGATAAGACTTGTTGG+AGG 0.598030 2_2:+8574328 None:intergenic
GCAAACACTACGTCCCTCAC+TGG 0.600483 2_2:+8579337 None:intergenic
CTGTACTGATATGCCTAGCA+TGG 0.603242 2_2:+8578434 None:intergenic
AGTTCTTTCTATCCTTGCCG+TGG 0.604170 2_2:-8577257 Msa0235710:CDS
TTCTTTACCACTGTCCACTG+TGG 0.605231 2_2:+8578408 None:intergenic
TTTCTGATGGATCCAGTAGT+CGG 0.606024 2_2:-8576085 Msa0235710:CDS
AGTGTTACCATACCAGCATA+GGG 0.606549 2_2:+8579299 None:intergenic
AGGATGTTGGACTCCATGCT+AGG 0.607182 2_2:-8578447 Msa0235710:CDS
GCTACGAAGAAAAGACAGCA+TGG 0.608415 2_2:-8575352 Msa0235710:CDS
CTACGAAGAAAAGACAGCAT+GGG 0.610425 2_2:-8575351 Msa0235710:CDS
CCACCTCAGCTCAAGAACAC+TGG 0.612331 2_2:+8574552 None:intergenic
CAAAGTACAATAAGCAACGA+GGG 0.616695 2_2:+8574926 None:intergenic
CCTTGCCGTGGACTATCCTG+TGG 0.617307 2_2:-8577245 Msa0235710:CDS
ACAATAAGCAACGAGGGGAA+GGG 0.618532 2_2:+8574932 None:intergenic
GAAGAAAACTGTGTTCCGGT+TGG 0.618594 2_2:+8575997 None:intergenic
GAAGGGTGGACTATGCAAGA+TGG 0.623650 2_2:-8576699 Msa0235710:CDS
CGTAGTGTTTGCTTGAGATG+TGG 0.626438 2_2:-8579326 Msa0235710:CDS
CAGACTATGATGAGTATGAG+AGG 0.626804 2_2:-8575523 Msa0235710:CDS
GTACTGACAAAGAAATCCAC+AGG 0.626913 2_2:+8577322 None:intergenic
AAGTAAAACTCAGGTGCACG+TGG 0.627075 2_2:+8577103 None:intergenic
AGGAAAATTCATCATACCAA+CGG 0.627464 2_2:-8574883 Msa0235710:intron
TTGATGATGATTCAATTGCA+AGG 0.628156 2_2:-8573946 Msa0235710:three_prime_UTR
AGCTTTATAAAGATGCAAAG+AGG 0.631014 2_2:-8575677 Msa0235710:CDS
GATATATGGTTCAGTGACTG+AGG 0.631286 2_2:-8575207 Msa0235710:CDS
TACGAAGAAAAGACAGCATG+GGG 0.632594 2_2:-8575350 Msa0235710:CDS
GGGTTCAAGATGCAATGTCG+TGG 0.634201 2_2:-8575173 Msa0235710:CDS
TGAATTATTTCCTGGCCAAG+AGG 0.637280 2_2:+8576674 None:intergenic
ATACCTGAATCATGCCAGGA+TGG 0.638411 2_2:+8576646 None:intergenic
ACTGTGTTAGCTGTGATCAA+CGG 0.640138 2_2:+8577277 None:intergenic
CCAGCAAATCCATACCAAAG+AGG 0.645200 2_2:+8575017 None:intergenic
AATGGTGGATATGAATCTTG+GGG 0.645925 2_2:-8574265 Msa0235710:CDS
GCTGACATTTGAATCCCTTG+TGG 0.648985 2_2:-8577182 Msa0235710:CDS
CCACAGGATAGTCCACGGCA+AGG 0.649649 2_2:+8577245 None:intergenic
TGGTGGTGTGTCTGAATCTG+CGG 0.650585 2_2:-8575420 Msa0235710:CDS
AGAAAACACCAGATGAAGGG+TGG 0.652717 2_2:-8576713 Msa0235710:CDS
TCATTATGTTAACAATAGCA+AGG 0.652996 2_2:-8576128 Msa0235710:CDS
TGTAGATTCAATGAAAACAG+TGG 0.654650 2_2:+8575454 None:intergenic
TGCAAATCAATCCACAACAA+CGG 0.656384 2_2:-8578822 Msa0235710:CDS
TCAATACCATCAAATCTTTG+GGG 0.656574 2_2:+8576037 None:intergenic
CACTGACCAAAGAATAACAA+TGG 0.657457 2_2:+8574147 None:intergenic
ACAGAACTGTTATAATCATG+CGG 0.661205 2_2:-8577727 Msa0235710:CDS
TGACCAGTGTTCTTGAGCTG+AGG 0.662591 2_2:-8574555 Msa0235710:CDS
TTCAAGGACCTGTATATGTG+GGG 0.662756 2_2:-8575821 Msa0235710:CDS
GTTCTTGAGCTGAGGTGGAG+CGG 0.667058 2_2:-8574547 Msa0235710:CDS
ATCCAGCTACAACACCAACA+AGG 0.679092 2_2:+8574302 None:intergenic
TGGAGTTGATGCTAATGGAG+AGG 0.686489 2_2:-8579420 Msa0235710:CDS
CAATACCATCAAATCTTTGG+GGG 0.690770 2_2:+8576038 None:intergenic
GGATGTGAAAGGGTAAACGA+TGG 0.692923 2_2:+8574953 None:intergenic
AAAGTACAATAAGCAACGAG+GGG 0.696943 2_2:+8574927 None:intergenic
ACAGTGTCCACAGTGGACAG+TGG 0.698824 2_2:-8578415 Msa0235710:intron
AAAGTCAGCTGTCTCCACAA+GGG 0.704045 2_2:+8577168 None:intergenic
GTGTTAGCTGTGATCAACGG+CGG 0.713429 2_2:+8577280 None:intergenic
AGGGAACTGATCTAACACCC+AGG 0.715025 2_2:+8577598 None:intergenic
GTTGATTATGAGACCAGTGA+GGG 0.718162 2_2:-8579350 Msa0235710:CDS
GCAAAGTACAATAAGCAACG+AGG 0.722782 2_2:+8574925 None:intergenic
TCCCTCAATGCTGATCAAGG+AGG 0.726123 2_2:-8575396 Msa0235710:CDS
TGTTGATTATGAGACCAGTG+AGG 0.750754 2_2:-8579351 Msa0235710:CDS
TCTACACTAATGGAGAATGG+TGG 0.757581 2_2:-8575437 Msa0235710:CDS
TATCAGTACAGTGTCCACAG+TGG 0.762817 2_2:-8578422 Msa0235710:CDS
TGACTGAGGATATCTTAACG+GGG 0.810778 2_2:-8575193 Msa0235710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATTGATATTTAATATTA+TGG + chr2_2:8575495-8575514 None:intergenic 10.0%
!! ACATTTATATTTCCAATATA+TGG - chr2_2:8574194-8574213 Msa0235710:CDS 15.0%
!!! TGGGAAAATATAAATTTTTA+AGG - chr2_2:8574875-8574894 Msa0235710:intron 15.0%
!!! TATAAATTTTTAAGGACAAT+AGG - chr2_2:8574883-8574902 Msa0235710:intron 15.0%
!!! CATTTTATATAATTTTGTTC+AGG + chr2_2:8575324-8575343 None:intergenic 15.0%
!!! TTTAGAAGTATTTATGATTA+AGG - chr2_2:8575387-8575406 Msa0235710:CDS 15.0%
!! TTCATATAAAATGAATTGTA+CGG - chr2_2:8576486-8576505 Msa0235710:intron 15.0%
!!! TAATTTTCTCATCTTTATTT+TGG - chr2_2:8578583-8578602 Msa0235710:intron 15.0%
!!! CTTAGTTTTTTATTAGTTAT+TGG + chr2_2:8578731-8578750 None:intergenic 15.0%
!! AATTGAAAAATCATATAACA+AGG + chr2_2:8579748-8579767 None:intergenic 15.0%
!! AATTGAAATATTATTGGTGA+AGG + chr2_2:8573819-8573838 None:intergenic 20.0%
!! TGTACAATCTAATTAAAAAG+AGG - chr2_2:8574407-8574426 Msa0235710:CDS 20.0%
!! ATTATTTGTTTCATTCACTT+AGG - chr2_2:8574498-8574517 Msa0235710:CDS 20.0%
!! TAACATTAGTACATTACAAT+AGG - chr2_2:8574682-8574701 Msa0235710:intron 20.0%
!!! ATTTATATTTTCCCAAAAAC+TGG + chr2_2:8574870-8574889 None:intergenic 20.0%
!! CTTTACACTAAAAGTAAATA+TGG - chr2_2:8575462-8575481 Msa0235710:CDS 20.0%
!!! CACTTGTTTATTATTTTTGT+TGG - chr2_2:8575585-8575604 Msa0235710:intron 20.0%
!!! ATTCATTTTCTTGAAGTATA+AGG + chr2_2:8575949-8575968 None:intergenic 20.0%
!! ACAGTAAAGTAATATCTAAA+TGG - chr2_2:8575982-8576001 Msa0235710:intron 20.0%
!! GTGACATCATTATAATTAAT+TGG - chr2_2:8576940-8576959 Msa0235710:intron 20.0%
!! TATTAAAATGAAAGCTGAAT+CGG + chr2_2:8577010-8577029 None:intergenic 20.0%
!! ACTTTATAGACTCATTAATA+AGG - chr2_2:8577869-8577888 Msa0235710:intron 20.0%
!! TTAATAATGATAAGACTTGT+TGG + chr2_2:8579121-8579140 None:intergenic 20.0%
!! ATAACATATGATCAAAACTT+TGG + chr2_2:8579454-8579473 None:intergenic 20.0%
!! TTTGATCATATGTTATGATA+TGG - chr2_2:8579458-8579477 Msa0235710:CDS 20.0%
!!! TGTAAGCATTTTGAATTATA+AGG - chr2_2:8579556-8579575 Msa0235710:five_prime_UTR 20.0%
!! AGATATCAATGTAAAAATAG+TGG - chr2_2:8579646-8579665 Msa0235710:five_prime_UTR 20.0%
!! TCTCAAACTATACTCTTTTA+TGG + chr2_2:8573907-8573926 None:intergenic 25.0%
! AGTATAGTTTGAGAAGTTAA+GGG - chr2_2:8573913-8573932 Msa0235710:three_prime_UTR 25.0%
! TTGGACATAAACAAAAATGA+TGG - chr2_2:8573960-8573979 Msa0235710:three_prime_UTR 25.0%
!! TAAACAAAAATGATGGAATC+AGG - chr2_2:8573967-8573986 Msa0235710:three_prime_UTR 25.0%
! TGCAAAATGAAACAAACTTT+AGG + chr2_2:8574557-8574576 None:intergenic 25.0%
!! TATTTTGTAGATAGAACAAG+AGG - chr2_2:8574577-8574596 Msa0235710:CDS 25.0%
!!! TAACCTTAGTTTTTGAGATT+TGG - chr2_2:8574718-8574737 Msa0235710:intron 25.0%
! TAACTGTTAGATGAAAAGAT+CGG + chr2_2:8574811-8574830 None:intergenic 25.0%
! TAGAATTAAATGATGAGTCT+GGG - chr2_2:8575141-8575160 Msa0235710:CDS 25.0%
! CAAAAAGAACAAGAAGAAAA+AGG - chr2_2:8575208-8575227 Msa0235710:CDS 25.0%
!! GATTTTGCATCAATGTATTA+TGG - chr2_2:8575516-8575535 Msa0235710:CDS 25.0%
! ATCAGAATAAATATTGAGCA+AGG + chr2_2:8575611-8575630 None:intergenic 25.0%
!! TTTATTCTGATCTATTTTGC+AGG - chr2_2:8575620-8575639 Msa0235710:intron 25.0%
! ATGATTATAACAGTTCTGTA+TGG + chr2_2:8575715-8575734 None:intergenic 25.0%
! ACTTCAAGAAAATGAATCAA+TGG - chr2_2:8575952-8575971 Msa0235710:intron 25.0%
!! ATCTCAAACTTTTTGCAAAA+TGG + chr2_2:8576316-8576335 None:intergenic 25.0%
! TTGGCTATAGAATTATTGAA+AGG - chr2_2:8576897-8576916 Msa0235710:intron 25.0%
! TCACATACATCAACAATATT+TGG + chr2_2:8576924-8576943 None:intergenic 25.0%
! TAATATCTGTTATCATTGTC+AGG - chr2_2:8577025-8577044 Msa0235710:intron 25.0%
! ACGCTTATTTCGATTATTAT+AGG - chr2_2:8577237-8577256 Msa0235710:CDS 25.0%
! TATTTCGATTATTATAGGTG+AGG - chr2_2:8577242-8577261 Msa0235710:CDS 25.0%
! ATTTCGATTATTATAGGTGA+GGG - chr2_2:8577243-8577262 Msa0235710:CDS 25.0%
! TCATTATGTTAACAATAGCA+AGG - chr2_2:8577315-8577334 Msa0235710:CDS 25.0%
! ATCAATACCATCAAATCTTT+GGG + chr2_2:8577410-8577429 None:intergenic 25.0%
!!! CATTGACTTTAACAATTATG+AGG - chr2_2:8577521-8577540 Msa0235710:intron 25.0%
!!! ACATTTCAGGTTAATATGAA+AGG - chr2_2:8577588-8577607 Msa0235710:CDS 25.0%
!!! AAGATGAAGATTTTGGTAAT+GGG + chr2_2:8577704-8577723 None:intergenic 25.0%
! CATTAATAAGGCATATCTTT+CGG - chr2_2:8577881-8577900 Msa0235710:intron 25.0%
!!! CTTAGCTTTGAAAAAACATT+TGG - chr2_2:8577961-8577980 Msa0235710:intron 25.0%
! TTTCATTGAATCTACACTAA+TGG - chr2_2:8577996-8578015 Msa0235710:intron 25.0%
! GTGAACTATATATGATCAAA+TGG - chr2_2:8579077-8579096 Msa0235710:intron 25.0%
! CTTATCATTATTAACCTTGT+TGG - chr2_2:8579127-8579146 Msa0235710:intron 25.0%
!! AAAAGTTTTCTTCGCATTTT+GGG - chr2_2:8579213-8579232 Msa0235710:intron 25.0%
! ATCTATAACCAGTCAATTAT+TGG + chr2_2:8579630-8579649 None:intergenic 25.0%
! ATTTTCAGAAGTTAAGTGGT+TGG + chr2_2:8573775-8573794 None:intergenic 30.0%
! GTTCATTTTCAGAAGTTAAG+TGG + chr2_2:8573779-8573798 None:intergenic 30.0%
GAGTATAGTTTGAGAAGTTA+AGG - chr2_2:8573912-8573931 Msa0235710:three_prime_UTR 30.0%
TTTGTTTATGTCCAACTTCA+AGG + chr2_2:8573955-8573974 None:intergenic 30.0%
!! GTGTTATTTCCCAATTTGTA+AGG - chr2_2:8574065-8574084 Msa0235710:CDS 30.0%
TAGAATTAGAGTGTACAGTT+AGG + chr2_2:8574173-8574192 None:intergenic 30.0%
GAAGTTACAGATCCATATAT+TGG + chr2_2:8574209-8574228 None:intergenic 30.0%
AGTCCAAATCTCAAAAACTA+AGG + chr2_2:8574724-8574743 None:intergenic 30.0%
TTCACCAAACTTTGATATCT+GGG + chr2_2:8574771-8574790 None:intergenic 30.0%
GTAGAATTAAATGATGAGTC+TGG - chr2_2:8575140-8575159 Msa0235710:CDS 30.0%
ACAGAACTGTTATAATCATG+CGG - chr2_2:8575716-8575735 Msa0235710:CDS 30.0%
TATTGATAGGAGACCATTTA+GGG + chr2_2:8575867-8575886 None:intergenic 30.0%
TAAATGGTCTCCTATCAATA+GGG - chr2_2:8575867-8575886 Msa0235710:intron 30.0%
!!! TATCAATAGGGTTGCTTTTA+CGG - chr2_2:8575879-8575898 Msa0235710:intron 30.0%
AAACTTTATATTGCCATGTC+AGG - chr2_2:8576065-8576084 Msa0235710:CDS 30.0%
!!! TAACATGATACTTTTTCCAC+AGG + chr2_2:8576217-8576236 None:intergenic 30.0%
TCATGTTATGTTTCAGATGA+TGG - chr2_2:8576229-8576248 Msa0235710:intron 30.0%
TCAGAAGATTGACTATTTGA+AGG - chr2_2:8576366-8576385 Msa0235710:CDS 30.0%
AATACTGAATGTCAGAAACA+AGG + chr2_2:8576619-8576638 None:intergenic 30.0%
TAAAGTCAGAGTTAATGCTT+TGG - chr2_2:8576695-8576714 Msa0235710:CDS 30.0%
AATCAAATCTCAATGATGAG+AGG - chr2_2:8576839-8576858 Msa0235710:intron 30.0%
TCAATACCATCAAATCTTTG+GGG + chr2_2:8577409-8577428 None:intergenic 30.0%
GATCAATACCATCAAATCTT+TGG + chr2_2:8577411-8577430 None:intergenic 30.0%
TATTAACCTGAAATGTGTCA+AGG + chr2_2:8577584-8577603 None:intergenic 30.0%
GTTAATATGAAAGGACTTGA+CGG - chr2_2:8577597-8577616 Msa0235710:CDS 30.0%
!!! AGATGAAGATTTTGGTAATG+GGG + chr2_2:8577703-8577722 None:intergenic 30.0%
!! CAAGATGAAGATTTTGGTAA+TGG + chr2_2:8577705-8577724 None:intergenic 30.0%
! CAACAACAAGATGAAGATTT+TGG + chr2_2:8577711-8577730 None:intergenic 30.0%
! AGCTTTATAAAGATGCAAAG+AGG - chr2_2:8577766-8577785 Msa0235710:CDS 30.0%
GCTTTATAAAGATGCAAAGA+GGG - chr2_2:8577767-8577786 Msa0235710:CDS 30.0%
!!! ATGCTGCTATTTTTAATCTC+AGG - chr2_2:8577799-8577818 Msa0235710:CDS 30.0%
!!! TGCTGCTATTTTTAATCTCA+GGG - chr2_2:8577800-8577819 Msa0235710:CDS 30.0%
TGTAGATTCAATGAAAACAG+TGG + chr2_2:8577992-8578011 None:intergenic 30.0%
TTATCTTACAAGACACTGAA+AGG + chr2_2:8578163-8578182 None:intergenic 30.0%
TATTGTGTATTCAGATTGGT+TGG - chr2_2:8578214-8578233 Msa0235710:CDS 30.0%
! ATTCAGATTGGTTGGATATA+TGG - chr2_2:8578222-8578241 Msa0235710:CDS 30.0%
AGGAAAATTCATCATACCAA+CGG - chr2_2:8578560-8578579 Msa0235710:intron 30.0%
AAAGATGAGAAAATTACCGT+TGG + chr2_2:8578579-8578598 None:intergenic 30.0%
GTTCTTACATCAAATTGTTG+TGG - chr2_2:8578799-8578818 Msa0235710:CDS 30.0%
GTGTTACCATAGAAGATTTA+TGG - chr2_2:8578918-8578937 Msa0235710:intron 30.0%
!! ATAATGATAAGACTTGTTGG+AGG + chr2_2:8579118-8579137 None:intergenic 30.0%
!! TTAATGGTGGATATGAATCT+TGG - chr2_2:8579176-8579195 Msa0235710:intron 30.0%
!! TAATGGTGGATATGAATCTT+GGG - chr2_2:8579177-8579196 Msa0235710:intron 30.0%
! AAGAAAACTTTTCCAATGAG+TGG + chr2_2:8579205-8579224 None:intergenic 30.0%
! GAAAAGTTTTCTTCGCATTT+TGG - chr2_2:8579212-8579231 Msa0235710:intron 30.0%
TCATCTTTATCCATTCCTTA+AGG - chr2_2:8579243-8579262 Msa0235710:intron 30.0%
CATCTTTATCCATTCCTTAA+GGG - chr2_2:8579244-8579263 Msa0235710:intron 30.0%
!! TTGATGATGATTCAATTGCA+AGG - chr2_2:8579497-8579516 Msa0235710:five_prime_UTR 30.0%
! TGTACTTTTATTCCATGCTT+TGG - chr2_2:8579582-8579601 Msa0235710:five_prime_UTR 30.0%
TAAAGAGACCAATAATTGAC+TGG - chr2_2:8579619-8579638 Msa0235710:five_prime_UTR 30.0%
TCCATCTAATTCTTCCCTTA+AGG - chr2_2:8573844-8573863 Msa0235710:three_prime_UTR 35.0%
TCCTTAAGGGAAGAATTAGA+TGG + chr2_2:8573848-8573867 None:intergenic 35.0%
GTCAATGAAGCAATCCTTAA+GGG + chr2_2:8573861-8573880 None:intergenic 35.0%
AGTCAATGAAGCAATCCTTA+AGG + chr2_2:8573862-8573881 None:intergenic 35.0%
GTTAAGGGTCATAGAGTTTA+TGG - chr2_2:8573928-8573947 Msa0235710:three_prime_UTR 35.0%
!!! GTTAGCTTTTGTAACTCTTG+TGG - chr2_2:8573991-8574010 Msa0235710:three_prime_UTR 35.0%
CAACACAAGCCTTACAAATT+GGG + chr2_2:8574077-8574096 None:intergenic 35.0%
TCAACACAAGCCTTACAAAT+TGG + chr2_2:8574078-8574097 None:intergenic 35.0%
!!! ACTTTTCCTTCTAGTTTTCG+TGG - chr2_2:8574235-8574254 Msa0235710:CDS 35.0%
GAATGCTTCAAATCGTTGAA+TGG + chr2_2:8574465-8574484 None:intergenic 35.0%
TGTAGATAGAACAAGAGGTA+AGG - chr2_2:8574582-8574601 Msa0235710:CDS 35.0%
TGCAAATCAATCCACAACAA+CGG - chr2_2:8574621-8574640 Msa0235710:intron 35.0%
CTTCACCAAACTTTGATATC+TGG + chr2_2:8574772-8574791 None:intergenic 35.0%
! AGAATCTAGGTCCAGTTTTT+GGG - chr2_2:8574856-8574875 Msa0235710:intron 35.0%
AACCTCTACTTGCATTATGT+AGG - chr2_2:8574976-8574995 Msa0235710:CDS 35.0%
ATCCTACATAATGCAAGTAG+AGG + chr2_2:8574981-8575000 None:intergenic 35.0%
ACTTGCATTATGTAGGATGT+TGG - chr2_2:8574983-8575002 Msa0235710:CDS 35.0%
TCCTATCTGGAAAAATAGAG+TGG - chr2_2:8575166-8575185 Msa0235710:CDS 35.0%
!! TCCACTCTATTTTTCCAGAT+AGG + chr2_2:8575170-8575189 None:intergenic 35.0%
GGAAAAATAGAGTGGAAAGT+TGG - chr2_2:8575174-8575193 Msa0235710:CDS 35.0%
AAATAGAGTGGAAAGTTGGA+AGG - chr2_2:8575178-8575197 Msa0235710:CDS 35.0%
TGCAGTAAGTTCAATGAGAA+AGG - chr2_2:8575288-8575307 Msa0235710:intron 35.0%
ACTGGAATTATCACTGAAAG+TGG + chr2_2:8575673-8575692 None:intergenic 35.0%
CTGGATGTGTAACTCTATAA+TGG + chr2_2:8575765-8575784 None:intergenic 35.0%
TGTTAGATCAGTTCCCTAAA+TGG - chr2_2:8575851-8575870 Msa0235710:intron 35.0%
CTATTGATAGGAGACCATTT+AGG + chr2_2:8575868-8575887 None:intergenic 35.0%
CTAAATGGTCTCCTATCAAT+AGG - chr2_2:8575866-8575885 Msa0235710:intron 35.0%
GTAAAAGCAACCCTATTGAT+AGG + chr2_2:8575880-8575899 None:intergenic 35.0%
CAAGGTAATTGGAAGCTATT+TGG - chr2_2:8575914-8575933 Msa0235710:intron 35.0%
! TTCTGAGAGAAGTAAAACTC+AGG + chr2_2:8576352-8576371 None:intergenic 35.0%
! AGTTCAACCTTCTTTTGTGA+AGG - chr2_2:8576393-8576412 Msa0235710:CDS 35.0%
! AGTTAATGCTTTGGTAGCTA+AGG - chr2_2:8576704-8576723 Msa0235710:CDS 35.0%
! TATCATTGTCAGGTTTTCCT+TGG - chr2_2:8577035-8577054 Msa0235710:CDS 35.0%
TCTATGTTTCCAGAGAGAAA+AGG - chr2_2:8577105-8577124 Msa0235710:CDS 35.0%
! TAAGCTCGTCAAGATTTTGT+AGG - chr2_2:8577209-8577228 Msa0235710:CDS 35.0%
! AAGCTCGTCAAGATTTTGTA+GGG - chr2_2:8577210-8577229 Msa0235710:CDS 35.0%
CAGTCAAGATTGAGAATGTA+GGG + chr2_2:8577292-8577311 None:intergenic 35.0%
ACAGTCAAGATTGAGAATGT+AGG + chr2_2:8577293-8577312 None:intergenic 35.0%
CAATACCATCAAATCTTTGG+GGG + chr2_2:8577408-8577427 None:intergenic 35.0%
CAATTATGAGGCGAAAATCA+TGG - chr2_2:8577533-8577552 Msa0235710:intron 35.0%
TTCTAACCTTGACACATTTC+AGG - chr2_2:8577575-8577594 Msa0235710:CDS 35.0%
ATTCAAGGACCTGTATATGT+GGG - chr2_2:8577621-8577640 Msa0235710:CDS 35.0%
!!! GATGAAGATTTTGGTAATGG+GGG + chr2_2:8577702-8577721 None:intergenic 35.0%
!! ATAAAGCTCTGAGACATCTT+TGG + chr2_2:8577754-8577773 None:intergenic 35.0%
GAATCTACACTAATGGAGAA+TGG - chr2_2:8578003-8578022 Msa0235710:intron 35.0%
TCTGAATACACAATACAGCA+AGG + chr2_2:8578209-8578228 None:intergenic 35.0%
GCTGTATTGTGTATTCAGAT+TGG - chr2_2:8578210-8578229 Msa0235710:CDS 35.0%
AGTGACTGAGGATATCTTAA+CGG - chr2_2:8578248-8578267 Msa0235710:CDS 35.0%
AAACGATCGGAAAGATTGAT+TGG + chr2_2:8578348-8578367 None:intergenic 35.0%
AAAGAGGACAATGTCTACTA+AGG + chr2_2:8578413-8578432 None:intergenic 35.0%
TTAGTAGACATTGTCCTCTT+TGG - chr2_2:8578412-8578431 Msa0235710:intron 35.0%
AAAGTACAATAAGCAACGAG+GGG + chr2_2:8578519-8578538 None:intergenic 35.0%
CAAAGTACAATAAGCAACGA+GGG + chr2_2:8578520-8578539 None:intergenic 35.0%
! TGATGAATTTTCCTGTGAGT+AGG + chr2_2:8578554-8578573 None:intergenic 35.0%
!!! ATTGCAAGTGCACTTTTTCT+TGG - chr2_2:8578845-8578864 Msa0235710:CDS 35.0%
GTTACGCCATAAATCTTCTA+TGG + chr2_2:8578927-8578946 None:intergenic 35.0%
! CTAACATCTTTAGGAATCCT+TGG + chr2_2:8579000-8579019 None:intergenic 35.0%
! GGATTTTCTGATGCACTTAA+TGG - chr2_2:8579160-8579179 Msa0235710:intron 35.0%
! TTTTCTGATGCACTTAATGG+TGG - chr2_2:8579163-8579182 Msa0235710:intron 35.0%
!! AATGGTGGATATGAATCTTG+GGG - chr2_2:8579178-8579197 Msa0235710:intron 35.0%
GAATAACAATGGTTGGAGTA+CGG + chr2_2:8579288-8579307 None:intergenic 35.0%
! CTCCAACCATTGTTATTCTT+TGG - chr2_2:8579290-8579309 Msa0235710:intron 35.0%
GACCAAAGAATAACAATGGT+TGG + chr2_2:8579295-8579314 None:intergenic 35.0%
CACTGACCAAAGAATAACAA+TGG + chr2_2:8579299-8579318 None:intergenic 35.0%
! TATTCTTTGGTCAGTGCTTT+TGG - chr2_2:8579303-8579322 Msa0235710:intron 35.0%
TTCTGTCTTCTCACTTGTTT+GGG - chr2_2:8579327-8579346 Msa0235710:CDS 35.0%
CTATCAACTTTGCTCACAAA+TGG + chr2_2:8579364-8579383 None:intergenic 35.0%
CAGAAAAATTGTCCAAAGCA+TGG + chr2_2:8579597-8579616 None:intergenic 35.0%
CAAGGTAGATAACATGAGTA+TGG + chr2_2:8579730-8579749 None:intergenic 35.0%
GAAGGTGATTGTAGTATGGT+GGG + chr2_2:8573801-8573820 None:intergenic 40.0%
TGAAGGTGATTGTAGTATGG+TGG + chr2_2:8573802-8573821 None:intergenic 40.0%
TGGTGAAGGTGATTGTAGTA+TGG + chr2_2:8573805-8573824 None:intergenic 40.0%
GAGTTTATGGTCCTTGAAGT+TGG - chr2_2:8573941-8573960 Msa0235710:three_prime_UTR 40.0%
AACTCTTGTGGTGAACAAGT+TGG - chr2_2:8574003-8574022 Msa0235710:three_prime_UTR 40.0%
!! CAAGTTGGAGTTGATGCTAA+TGG - chr2_2:8574018-8574037 Msa0235710:three_prime_UTR 40.0%
! TGTTGATTATGAGACCAGTG+AGG - chr2_2:8574092-8574111 Msa0235710:CDS 40.0%
GTTGATTATGAGACCAGTGA+GGG - chr2_2:8574093-8574112 Msa0235710:CDS 40.0%
AGTGTTACCATACCAGCATA+GGG + chr2_2:8574147-8574166 None:intergenic 40.0%
TAGTGTTACCATACCAGCAT+AGG + chr2_2:8574148-8574167 None:intergenic 40.0%
TGGCATGGTTGTATTTGACT+TGG - chr2_2:8574255-8574274 Msa0235710:CDS 40.0%
!! GGATTGATTTGCAGGAACTT+TGG + chr2_2:8574614-8574633 None:intergenic 40.0%
!! GTTGTTGTGGATTGATTTGC+AGG + chr2_2:8574622-8574641 None:intergenic 40.0%
CGATCCCAGATATCAAAGTT+TGG - chr2_2:8574764-8574783 Msa0235710:intron 40.0%
AAGATCGGATGACTCATACT+AGG + chr2_2:8574796-8574815 None:intergenic 40.0%
! GAGAATCTAGGTCCAGTTTT+TGG - chr2_2:8574855-8574874 Msa0235710:intron 40.0%
!! GAAGAAAAAGGAAGCACCTA+AGG - chr2_2:8575220-8575239 Msa0235710:intron 40.0%
!!! CCAAGTTTCGATTTTGAGAC+TGG + chr2_2:8575691-8575710 None:intergenic 40.0%
CCAGTCTCAAAATCGAAACT+TGG - chr2_2:8575688-8575707 Msa0235710:CDS 40.0%
AATCATGCGGCTCGTAATAT+TGG - chr2_2:8575729-8575748 Msa0235710:CDS 40.0%
ATCATGCGGCTCGTAATATT+GGG - chr2_2:8575730-8575749 Msa0235710:CDS 40.0%
!!! CATCCAGTTGATAGTGCTTT+TGG - chr2_2:8575778-8575797 Msa0235710:CDS 40.0%
!! AGACCAAAAGCACTATCAAC+TGG + chr2_2:8575784-8575803 None:intergenic 40.0%
!!! TTGATAGTGCTTTTGGTCTG+TGG - chr2_2:8575785-8575804 Msa0235710:CDS 40.0%
CATCTATCATCTGTGAGATC+TGG - chr2_2:8575812-8575831 Msa0235710:CDS 40.0%
!!! AGATCTGGTTTGCTTTTTCC+TGG - chr2_2:8575827-8575846 Msa0235710:CDS 40.0%
!!! GATCTGGTTTGCTTTTTCCT+GGG - chr2_2:8575828-8575847 Msa0235710:CDS 40.0%
CATGTCAGGTTTGAAAGAGA+GGG - chr2_2:8576079-8576098 Msa0235710:CDS 40.0%
! GTACTGACAAAGAAATCCAC+AGG + chr2_2:8576124-8576143 None:intergenic 40.0%
ACTGTGTTAGCTGTGATCAA+CGG + chr2_2:8576169-8576188 None:intergenic 40.0%
! TTTTTCCACAGGATAGTCCA+CGG + chr2_2:8576206-8576225 None:intergenic 40.0%
! AGCTGACTTTGCAAGAAAGT+GGG - chr2_2:8576288-8576307 Msa0235710:intron 40.0%
CTACGTTCCTTCACAAAAGA+AGG + chr2_2:8576403-8576422 None:intergenic 40.0%
ACTGAATGTCAGAAACAAGG+TGG + chr2_2:8576616-8576635 None:intergenic 40.0%
CTCAGAAAACACCAGATGAA+GGG - chr2_2:8576727-8576746 Msa0235710:CDS 40.0%
TGAATTATTTCCTGGCCAAG+AGG + chr2_2:8576772-8576791 None:intergenic 40.0%
AGATATACCTGAATCATGCC+AGG + chr2_2:8576804-8576823 None:intergenic 40.0%
! GATACCTAGTTTGTGCAACT+TGG - chr2_2:8576878-8576897 Msa0235710:intron 40.0%
ATAGCCAAGTTGCACAAACT+AGG + chr2_2:8576885-8576904 None:intergenic 40.0%
TAGAAGGAAACGAACTTCCA+AGG - chr2_2:8577078-8577097 Msa0235710:CDS 40.0%
!!! TTTTTGTGGTGTTGGTAACC+TGG + chr2_2:8577131-8577150 None:intergenic 40.0%
AGGTTACCAACACCACAAAA+AGG - chr2_2:8577130-8577149 Msa0235710:CDS 40.0%
! AGAAGCGATGTGTTTTCTGA+TGG - chr2_2:8577345-8577364 Msa0235710:CDS 40.0%
! TTTCTGATGGATCCAGTAGT+CGG - chr2_2:8577358-8577377 Msa0235710:CDS 40.0%
CATCGAAGAAAACTGTGTTC+CGG + chr2_2:8577453-8577472 None:intergenic 40.0%
CATTCAAGGACCTGTATATG+TGG - chr2_2:8577620-8577639 Msa0235710:CDS 40.0%
TTCAAGGACCTGTATATGTG+GGG - chr2_2:8577622-8577641 Msa0235710:CDS 40.0%
TTCAATCGACAAGCGCTTTA+TGG - chr2_2:8577657-8577676 Msa0235710:CDS 40.0%
CAGACTATGATGAGTATGAG+AGG - chr2_2:8577920-8577939 Msa0235710:intron 40.0%
TCTACACTAATGGAGAATGG+TGG - chr2_2:8578006-8578025 Msa0235710:intron 40.0%
AAGGAGGCCATTCATGTAAT+CGG - chr2_2:8578063-8578082 Msa0235710:intron 40.0%
CTACGAAGAAAAGACAGCAT+GGG - chr2_2:8578092-8578111 Msa0235710:intron 40.0%
TACGAAGAAAAGACAGCATG+GGG - chr2_2:8578093-8578112 Msa0235710:intron 40.0%
GATATATGGTTCAGTGACTG+AGG - chr2_2:8578236-8578255 Msa0235710:CDS 40.0%
GTGACTGAGGATATCTTAAC+GGG - chr2_2:8578249-8578268 Msa0235710:CDS 40.0%
TGACTGAGGATATCTTAACG+GGG - chr2_2:8578250-8578269 Msa0235710:CDS 40.0%
CAATTTACTGCATGCCCTTA+AGG - chr2_2:8578301-8578320 Msa0235710:CDS 40.0%
!! AAGAACTTGGTGCAAACGAT+CGG + chr2_2:8578361-8578380 None:intergenic 40.0%
TTTGCACCAAGTTCTTCGAT+GGG - chr2_2:8578365-8578384 Msa0235710:intron 40.0%
AGACATTGTCCTCTTTGGTA+TGG - chr2_2:8578417-8578436 Msa0235710:CDS 40.0%
GCAAAGTACAATAAGCAACG+AGG + chr2_2:8578521-8578540 None:intergenic 40.0%
!! CATCTTTTTGCTGTCTTCCA+AGG - chr2_2:8578980-8578999 Msa0235710:intron 40.0%
GGATTCCTAAAGATGTTAGC+AGG - chr2_2:8579001-8579020 Msa0235710:intron 40.0%
CAACACCTGCTAACATCTTT+AGG + chr2_2:8579009-8579028 None:intergenic 40.0%
TCCATTCCTTAAGGGTCTTA+TGG - chr2_2:8579252-8579271 Msa0235710:intron 40.0%
! CCATTCCTTAAGGGTCTTAT+GGG - chr2_2:8579253-8579272 Msa0235710:intron 40.0%
CTTCTGTCTTCTCACTTGTT+TGG - chr2_2:8579326-8579345 Msa0235710:CDS 40.0%
ACTTTGGCAAGCACAATTGT+TGG + chr2_2:8579438-8579457 None:intergenic 40.0%
!! TGGAGTTGATGCTAATGGAG+AGG - chr2_2:8574023-8574042 Msa0235710:exon 45.0%
!! TGCTAATGGAGAGGTGTTTG+TGG - chr2_2:8574032-8574051 Msa0235710:exon 45.0%
CGTAGTGTTTGCTTGAGATG+TGG - chr2_2:8574117-8574136 Msa0235710:CDS 45.0%
!!! TCCTTCTAGTTTTCGTGGCA+TGG - chr2_2:8574240-8574259 Msa0235710:CDS 45.0%
ACCATGCCACGAAAACTAGA+AGG + chr2_2:8574244-8574263 None:intergenic 45.0%
TACAGCACTGCAGAGAATCT+AGG - chr2_2:8574843-8574862 Msa0235710:intron 45.0%
! CTGTACTGATATGCCTAGCA+TGG + chr2_2:8575012-8575031 None:intergenic 45.0%
TATCAGTACAGTGTCCACAG+TGG - chr2_2:8575021-8575040 Msa0235710:CDS 45.0%
TTCTTTACCACTGTCCACTG+TGG + chr2_2:8575038-8575057 None:intergenic 45.0%
ATGAGTCTGGGAATCCTATC+TGG - chr2_2:8575153-8575172 Msa0235710:CDS 45.0%
AGTGGAAAGTTGGAAGGAGA+AGG - chr2_2:8575184-8575203 Msa0235710:CDS 45.0%
!! AAAAAGGAAGCACCTAAGGC+TGG - chr2_2:8575224-8575243 Msa0235710:intron 45.0%
ATCTGCTGTTCATGTGGAAC+TGG + chr2_2:8575260-8575279 None:intergenic 45.0%
AGTTCCACATGAACAGCAGA+TGG - chr2_2:8575259-8575278 Msa0235710:intron 45.0%
TCATCCATCTGCTGTTCATG+TGG + chr2_2:8575266-8575285 None:intergenic 45.0%
TTCGTGCAATTACAACGACG+TGG + chr2_2:8575543-8575562 None:intergenic 45.0%
!!! ATAGGGTTGCTTTTACGGAC+AGG - chr2_2:8575884-8575903 Msa0235710:intron 45.0%
CCTCTCTTTCAAACCTGACA+TGG + chr2_2:8576081-8576100 None:intergenic 45.0%
CCATGTCAGGTTTGAAAGAG+AGG - chr2_2:8576078-8576097 Msa0235710:CDS 45.0%
ATCAACGGCGGTTCTTTCAA+CGG + chr2_2:8576154-8576173 None:intergenic 45.0%
AGTTCTTTCTATCCTTGCCG+TGG - chr2_2:8576186-8576205 Msa0235710:CDS 45.0%
GCTGACATTTGAATCCCTTG+TGG - chr2_2:8576261-8576280 Msa0235710:intron 45.0%
AAAGTCAGCTGTCTCCACAA+GGG + chr2_2:8576278-8576297 None:intergenic 45.0%
! CAGCTGACTTTGCAAGAAAG+TGG - chr2_2:8576287-8576306 Msa0235710:intron 45.0%
AAGTAAAACTCAGGTGCACG+TGG + chr2_2:8576343-8576362 None:intergenic 45.0%
GCTCAGAAAACACCAGATGA+AGG - chr2_2:8576726-8576745 Msa0235710:CDS 45.0%
AGAAAACACCAGATGAAGGG+TGG - chr2_2:8576730-8576749 Msa0235710:CDS 45.0%
CTATGCAAGATGGAACCTCT+TGG - chr2_2:8576754-8576773 Msa0235710:CDS 45.0%
TGGTCGCGTGAATTATTTCC+TGG + chr2_2:8576780-8576799 None:intergenic 45.0%
AATAATTCACGCGACCATCC+TGG - chr2_2:8576783-8576802 Msa0235710:intron 45.0%
ATACCTGAATCATGCCAGGA+TGG + chr2_2:8576800-8576819 None:intergenic 45.0%
AGGAAACGAACTTCCAAGGT+TGG - chr2_2:8577082-8577101 Msa0235710:CDS 45.0%
CTGGAAACATAGACCAACCT+TGG + chr2_2:8577098-8577117 None:intergenic 45.0%
TACCAACACCACAAAAAGGC+TGG - chr2_2:8577134-8577153 Msa0235710:CDS 45.0%
! TTTCAGCACCAGCCTTTTTG+TGG + chr2_2:8577145-8577164 None:intergenic 45.0%
! CAAACATCTCTACCGACTAC+TGG + chr2_2:8577373-8577392 None:intergenic 45.0%
CAGTTCCCCCAAAGATTTGA+TGG - chr2_2:8577400-8577419 Msa0235710:intron 45.0%
GTAGTGATCGATATGCCAAC+CGG - chr2_2:8577431-8577450 Msa0235710:intron 45.0%
GAAGAAAACTGTGTTCCGGT+TGG + chr2_2:8577449-8577468 None:intergenic 45.0%
AAAGGACTTGACGGCATTCA+AGG - chr2_2:8577606-8577625 Msa0235710:CDS 45.0%
!! TTTGGTAATGGGGGCATAGA+AGG + chr2_2:8577693-8577712 None:intergenic 45.0%
GCCATTCATGTAATCGGTTG+TGG - chr2_2:8578069-8578088 Msa0235710:intron 45.0%
GCCACAACCGATTACATGAA+TGG + chr2_2:8578073-8578092 None:intergenic 45.0%
GCTACGAAGAAAAGACAGCA+TGG - chr2_2:8578091-8578110 Msa0235710:intron 45.0%
AAAGACAGCATGGGGAAAAG+AGG - chr2_2:8578101-8578120 Msa0235710:intron 45.0%
TCAAGATGCAATGTCGTGGA+TGG - chr2_2:8578274-8578293 Msa0235710:CDS 45.0%
CCTTTGAATGCAGGCCTTAA+GGG + chr2_2:8578318-8578337 None:intergenic 45.0%
CCTTAAGGCCTGCATTCAAA+GGG - chr2_2:8578316-8578335 Msa0235710:intron 45.0%
GTTTGCACCAAGTTCTTCGA+TGG - chr2_2:8578364-8578383 Msa0235710:intron 45.0%
CCAGCAAATCCATACCAAAG+AGG + chr2_2:8578429-8578448 None:intergenic 45.0%
CCTCTTTGGTATGGATTTGC+TGG - chr2_2:8578426-8578445 Msa0235710:CDS 45.0%
!! CTTTGGTATGGATTTGCTGG+TGG - chr2_2:8578429-8578448 Msa0235710:CDS 45.0%
GGATGTGAAAGGGTAAACGA+TGG + chr2_2:8578493-8578512 None:intergenic 45.0%
ACAATAAGCAACGAGGGGAA+GGG + chr2_2:8578514-8578533 None:intergenic 45.0%
TACAATAAGCAACGAGGGGA+AGG + chr2_2:8578515-8578534 None:intergenic 45.0%
!! AACGAGCAGTTCTGGGTAAT+TGG - chr2_2:8578944-8578963 Msa0235710:intron 45.0%
!! CTGGGTAATTGGAGGTGTTT+CGG - chr2_2:8578955-8578974 Msa0235710:intron 45.0%
! GCTGCTGATGATGCAGAATT+TGG - chr2_2:8579055-8579074 Msa0235710:intron 45.0%
!! AACCTTGTTGGTGTTGTAGC+TGG - chr2_2:8579139-8579158 Msa0235710:intron 45.0%
ATCCAGCTACAACACCAACA+AGG + chr2_2:8579144-8579163 None:intergenic 45.0%
CCCATAAGACCCTTAAGGAA+TGG + chr2_2:8579256-8579275 None:intergenic 45.0%
! CAATGGTTGGAGTACGGTTT+TGG + chr2_2:8579282-8579301 None:intergenic 45.0%
!! AAAAAAAATTGAAATATTAT+TGG + chr2_2:8573825-8573844 None:intergenic 5.0%
AGATGTGGCAATCCCTATGC+TGG - chr2_2:8574132-8574151 Msa0235710:CDS 50.0%
TGGCAATCCCTATGCTGGTA+TGG - chr2_2:8574137-8574156 Msa0235710:CDS 50.0%
TGCACAGATCAGCACTTCTC+AGG - chr2_2:8574645-8574664 Msa0235710:intron 50.0%
AGGATGTTGGACTCCATGCT+AGG - chr2_2:8574996-8575015 Msa0235710:CDS 50.0%
GGAGTCTCATTTCCAGCCTT+AGG + chr2_2:8575239-8575258 None:intergenic 50.0%
AGGGAACTGATCTAACACCC+AGG + chr2_2:8575848-8575867 None:intergenic 50.0%
! TGCTTTTACGGACAGGCTCT+CGG - chr2_2:8575891-8575910 Msa0235710:intron 50.0%
GTGTTAGCTGTGATCAACGG+CGG + chr2_2:8576166-8576185 None:intergenic 50.0%
CAAAGTCAGCTGTCTCCACA+AGG + chr2_2:8576279-8576298 None:intergenic 50.0%
TGCATAGTCCACCCTTCATC+TGG + chr2_2:8576741-8576760 None:intergenic 50.0%
!! GAAGGGTGGACTATGCAAGA+TGG - chr2_2:8576744-8576763 Msa0235710:CDS 50.0%
! CAGGTTTTCCTTGGACACAG+TGG - chr2_2:8577044-8577063 Msa0235710:CDS 50.0%
AGTGGTGCTCACGACATAGA+AGG - chr2_2:8577062-8577081 Msa0235710:CDS 50.0%
GTTTCCAGAGAGAAAAGGCC+AGG - chr2_2:8577110-8577129 Msa0235710:CDS 50.0%
!! GTAACCTGGCCTTTTCTCTC+TGG + chr2_2:8577117-8577136 None:intergenic 50.0%
! CACCAGCCTTTTTGTGGTGT+TGG + chr2_2:8577139-8577158 None:intergenic 50.0%
CATCCAGTCCCCACATATAC+AGG + chr2_2:8577633-8577652 None:intergenic 50.0%
CTTTGGCAGGCTTCTTTGAG+CGG + chr2_2:8577737-8577756 None:intergenic 50.0%
!! AGCTCTGAGACATCTTTGGC+AGG + chr2_2:8577750-8577769 None:intergenic 50.0%
! TGGTGGTGTGTCTGAATCTG+CGG - chr2_2:8578023-8578042 Msa0235710:intron 50.0%
GGATCCCTCAATGCTGATCA+AGG - chr2_2:8578044-8578063 Msa0235710:intron 50.0%
TCCCTCAATGCTGATCAAGG+AGG - chr2_2:8578047-8578066 Msa0235710:intron 50.0%
! GCCTCCTTGATCAGCATTGA+GGG + chr2_2:8578051-8578070 None:intergenic 50.0%
CAGCATGGGGAAAAGAGGTT+AGG - chr2_2:8578106-8578125 Msa0235710:intron 50.0%
GGGTTCAAGATGCAATGTCG+TGG - chr2_2:8578270-8578289 Msa0235710:CDS 50.0%
AGATGCAATGTCGTGGATGG+AGG - chr2_2:8578277-8578296 Msa0235710:CDS 50.0%
CCCTTAAGGCCTGCATTCAA+AGG - chr2_2:8578315-8578334 Msa0235710:intron 50.0%
CCCTTTGAATGCAGGCCTTA+AGG + chr2_2:8578319-8578338 None:intergenic 50.0%
CAAGAGCCCATCGAAGAACT+TGG + chr2_2:8578374-8578393 None:intergenic 50.0%
! CAAGTTCTTCGATGGGCTCT+TGG - chr2_2:8578372-8578391 Msa0235710:intron 50.0%
! TCTGAAACTGCTGCAGAGAC+TGG - chr2_2:8578455-8578474 Msa0235710:intron 50.0%
CCTGTGAGTAGGCAAATTGC+AGG + chr2_2:8578543-8578562 None:intergenic 50.0%
CCTGCAATTTGCCTACTCAC+AGG - chr2_2:8578540-8578559 Msa0235710:intron 50.0%
TGACCAGTGTTCTTGAGCTG+AGG - chr2_2:8578888-8578907 Msa0235710:intron 50.0%
TATGGCGTAACGAGCAGTTC+TGG - chr2_2:8578936-8578955 Msa0235710:intron 50.0%
ATGGCGTAACGAGCAGTTCT+GGG - chr2_2:8578937-8578956 Msa0235710:intron 50.0%
!! GAGCAGTTCTGGGTAATTGG+AGG - chr2_2:8578947-8578966 Msa0235710:intron 50.0%
GAATCTTGGGGACCACTCAT+TGG - chr2_2:8579190-8579209 Msa0235710:intron 50.0%
GCAAACACTACGTCCCTCAC+TGG + chr2_2:8574109-8574128 None:intergenic 55.0%
GATCTGTGCAGCCGTTGTTG+TGG + chr2_2:8574635-8574654 None:intergenic 55.0%
ACAGTGTCCACAGTGGACAG+TGG - chr2_2:8575028-8575047 Msa0235710:CDS 55.0%
! ATTTTGCAGGCCCTCCTCTG+AGG - chr2_2:8575633-8575652 Msa0235710:intron 55.0%
CAGGCTCTCGGCAAGGTAAT+TGG - chr2_2:8575903-8575922 Msa0235710:intron 55.0%
! ACCTTGTCAGCTTGCTCCTG+TGG - chr2_2:8576105-8576124 Msa0235710:CDS 55.0%
TCCACAGGAGCAAGCTGACA+AGG + chr2_2:8576109-8576128 None:intergenic 55.0%
CAAGATGGAACCTCTTGGCC+AGG - chr2_2:8576759-8576778 Msa0235710:CDS 55.0%
CGACCATCCTGGCATGATTC+AGG - chr2_2:8576794-8576813 Msa0235710:intron 55.0%
! GGCTGGTGCTGAAAATGCAC+TGG - chr2_2:8577151-8577170 Msa0235710:CDS 55.0%
GGACCTGTATATGTGGGGAC+TGG - chr2_2:8577627-8577646 Msa0235710:CDS 55.0%
!! GGTAATGGGGGCATAGAAGG+TGG + chr2_2:8577690-8577709 None:intergenic 55.0%
GGCCTCCTTGATCAGCATTG+AGG + chr2_2:8578052-8578071 None:intergenic 55.0%
CGAGGGGAAGGGATGTGAAA+GGG + chr2_2:8578503-8578522 None:intergenic 55.0%
ACGAGGGGAAGGGATGTGAA+AGG + chr2_2:8578504-8578523 None:intergenic 55.0%
CCACCTCAGCTCAAGAACAC+TGG + chr2_2:8578894-8578913 None:intergenic 55.0%
CCAGTGTTCTTGAGCTGAGG+TGG - chr2_2:8578891-8578910 Msa0235710:intron 55.0%
GTTCTTGAGCTGAGGTGGAG+CGG - chr2_2:8578896-8578915 Msa0235710:intron 55.0%
GGCGACCCATAAGACCCTTA+AGG + chr2_2:8579261-8579280 None:intergenic 55.0%
TTACGGACAGGCTCTCGGCA+AGG - chr2_2:8575896-8575915 Msa0235710:intron 60.0%
CCACAGGATAGTCCACGGCA+AGG + chr2_2:8576201-8576220 None:intergenic 60.0%
! CCTTGCCGTGGACTATCCTG+TGG - chr2_2:8576198-8576217 Msa0235710:intron 60.0%
CGTGAGCACCACTGTGTCCA+AGG + chr2_2:8577055-8577074 None:intergenic 60.0%
!! GGCGCTGACCCTTTGAATGC+AGG + chr2_2:8578327-8578346 None:intergenic 60.0%
GCAGCTGCAGCCTCAGAGGA+GGG + chr2_2:8575646-8575665 None:intergenic 65.0%
AGCAGCTGCAGCCTCAGAGG+AGG + chr2_2:8575647-8575666 None:intergenic 65.0%
CTCAGCAGCTGCAGCCTCAG+AGG + chr2_2:8575650-8575669 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 8573679 8579786 8573679 ID=Msa0235710;Name=Msa0235710
chr2_2 mRNA 8573679 8579786 8573679 ID=Msa0235710-mRNA-1;Parent=Msa0235710;Name=Msa0235710-mRNA-1;_AED=0.08;_eAED=0.08;_QI=297|1|1|1|1|1|13|363|977
chr2_2 exon 8573679 8574629 8573679 ID=Msa0235710-mRNA-1:exon:3712;Parent=Msa0235710-mRNA-1
chr2_2 exon 8574884 8575237 8574884 ID=Msa0235710-mRNA-1:exon:3711;Parent=Msa0235710-mRNA-1
chr2_2 exon 8575343 8575542 8575343 ID=Msa0235710-mRNA-1:exon:3710;Parent=Msa0235710-mRNA-1
chr2_2 exon 8575634 8575868 8575634 ID=Msa0235710-mRNA-1:exon:3709;Parent=Msa0235710-mRNA-1
chr2_2 exon 8575994 8576206 8575994 ID=Msa0235710-mRNA-1:exon:3708;Parent=Msa0235710-mRNA-1
chr2_2 exon 8576293 8576418 8576293 ID=Msa0235710-mRNA-1:exon:3707;Parent=Msa0235710-mRNA-1
chr2_2 exon 8576650 8576787 8576650 ID=Msa0235710-mRNA-1:exon:3706;Parent=Msa0235710-mRNA-1
chr2_2 exon 8577033 8577378 8577033 ID=Msa0235710-mRNA-1:exon:3705;Parent=Msa0235710-mRNA-1
chr2_2 exon 8577548 8577823 8577548 ID=Msa0235710-mRNA-1:exon:3704;Parent=Msa0235710-mRNA-1
chr2_2 exon 8578174 8578321 8578174 ID=Msa0235710-mRNA-1:exon:3703;Parent=Msa0235710-mRNA-1
chr2_2 exon 8578416 8578467 8578416 ID=Msa0235710-mRNA-1:exon:3702;Parent=Msa0235710-mRNA-1
chr2_2 exon 8578799 8578878 8578799 ID=Msa0235710-mRNA-1:exon:3701;Parent=Msa0235710-mRNA-1
chr2_2 exon 8579312 8579786 8579312 ID=Msa0235710-mRNA-1:exon:3700;Parent=Msa0235710-mRNA-1
chr2_2 five_prime_UTR 8579490 8579786 8579490 ID=Msa0235710-mRNA-1:five_prime_utr;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8579312 8579489 8579312 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8578799 8578878 8578799 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8578416 8578467 8578416 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8578174 8578321 8578174 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8577548 8577823 8577548 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8577033 8577378 8577033 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8576650 8576787 8576650 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8576293 8576418 8576293 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8575994 8576206 8575994 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8575634 8575868 8575634 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8575343 8575542 8575343 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8574884 8575237 8574884 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 CDS 8574042 8574629 8574042 ID=Msa0235710-mRNA-1:cds;Parent=Msa0235710-mRNA-1
chr2_2 three_prime_UTR 8573679 8574041 8573679 ID=Msa0235710-mRNA-1:three_prime_utr;Parent=Msa0235710-mRNA-1
Gene Sequence

>Msa0235710

ATGATGGAATCAGGAGTTAGCTTTTGTAACTCTTGTGGTGAACAAGTTGGAGTTGATGCTAATGGAGAGGTGTTTGTGGCTTGTCATGAGTGTTATTTCCCAATTTGTAAGGCTTGTGTTGATTATGAGACCAGTGAGGGACGTAGTGTTTGCTTGAGATGTGGCAATCCCTATGCTGATAGAACAAGAGGTAAGGATGACACCAAAGTTCCTGCAAATCAATCCACAACAACGGCTGCACAGATCAGCACTTCTCAGGATGTTGGACTCCATGCTAGGCATATCAGTACAGTGTCCACAGTGGACAGTGAATTAAATGATGAGTCTGGGAATCCTATCTGGAAAAATAGAGTGGAAAGTTGGAAGGAGAAGGACAAAAAGAACAAGAAGAAAAAGGAAGCACCTAAGGCTGGAAATGAGACTCCAGTTCCACATGAACAGCAGATGGATGAAATGCAGCCCTCCTCTGAGGCTGCAGCTGCTGAGCCACTTTCAGTGATAATTCCAGTCTCAAAATCGAAACTTGGACCATACAGAACTGTTATAATCATGCGGCTCGTAATATTGGGTCTGTTTTTCCATTATAGAGTTACACATCCAGTTGATAGTGCTTTTGGTCTGTGGTTGACATCTATCATCTGTGAGATCTGGTTTGCTTTTTCCTGGGTGTTAGATCAGTTCCCTAAATGGTCTCCTATCAATAGGGTTGCTTTTACGGACAGGCTCTCGGCAAGGTTTGAAAGAGAGGGTGAACCTTGTCAGCTTGCTCCTGTGGATTTCTTTGTCAGTACAGTTGATCCGTTGAAAGAACCGCCGTTGATCACAGCTAACACAGTTCTTTCTATCCTTGCCGTGGACTATCCTGTGGAAAAAGTATCATGTTATGTTTCAGATGATGGTGCTGCAATGCTGACATTTGAATCCCTTGTGGAGACAGCTGACTTTGCAAGAAAGTGGGTTCCATTTTGCAAAAAGTTTGAGATTGAACCACGTGCACCTGAGTTTTACTTCTCTCAGAAGATTGACTATTTGAAGGACAAAGTTCAACCTTCTTTTGTGAAGGAACGTAGAGCAATGAAAAGAGAATATGAAGAGTATAAAGTCAGAGTTAATGCTTTGGTAGCTAAGGCTCAGAAAACACCAGATGAAGGGTGGACTATGCAAGATGGAACCTCTTGGCCAGGAAATAATTCACGCGACCATCCTGGCATGATTCAGGTTTTCCTTGGACACAGTGGTGCTCACGACATAGAAGGAAACGAACTTCCAAGGTTGGTCTATGTTTCCAGAGAGAAAAGGCCAGGTTACCAACACCACAAAAAGGCTGGTGCTGAAAATGCACTGGTGAGGGTGTCTGCAGTTCTCACAAACGCTCCCTACATTCTCAATCTTGACTGTGATCATTATGTTAACAATAGCAAGGCTGTTCGAGAAGCGATGTGTTTTCTGATGGATCCAGTAGTCGGTAGAGATGTTTGTTATGTGCAGTTCCCCCAAAGATTTGATGGTATTGATCGTAGTGATCGATATGCCAACCGGAACACAGTTTTCTTCGATGTTAATATGAAAGGACTTGACGGCATTCAAGGACCTGTATATGTGGGGACTGGATGTGTTTTCAATCGACAAGCGCTTTATGGATACAGTCCACCTTCTATGCCCCCATTACCAAAATCTTCATCTTGTTGTTGCTTCCGCTCAAAGAAGCCTGCCAAAGATGTCTCAGAGCTTTATAAAGATGCAAAGAGGGAAGAGCTTGATGCTGCTATTTTTAATCTCAGGGAGATTGAGAACTATGATGAGTATGAGAGGTCAATGCTTATTTCACAACTTAGCTTTGAAAAAACATTTGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAATGGTGGTGTGTCTGAATCTGCGGATCCCTCAATGCTGATCAAGGAGGCCATTCATGTAATCGGTTGTGGCTACGAAGAAAAGACAGCATGGGGAAAAGAGATTGGTTGGATATATGGTTCAGTGACTGAGGATATCTTAACGGGGTTCAAGATGCAATGTCGTGGATGGAGGTCAATTTACTGCATGCCCTTAAGGCCTGCATTCAAAGGGTCAGCGCCAATCAATCTTTCCGATCGTTTGCACCAAGTTCTTCGATGGGCTCTTGGATCAGTTGAAATTTTCCTTAGTAGACATTGTCCTCTTTGGTATGGATTTGCTGGTGGTCGTCTGAAACTGCTGCAGAGACTGGCTTATATAAACACCATCGTTTACCCTTTCACATCCCTTCCCCTCGTTGCTTATTGTACTTTGCCTGCAATTTGCCTACTCACAGGAAAATTCATCATACCAACGCTATCAAACATTGCAAGTGCACTTTTTCTTGGACTTTTCATCTCTATTATATTGACCAGTGTTCTTGAGCTGAGGTGGAGCGGTGTTACCATAGAAGATTTATGGCGTAACGAGCAGTTCTGGGTAATTGGAGGTGTTTCGGCTCATCTTTTTGCTGTCTTCCAAGGATTCCTAAAGATGTTAGCAGGTGTTGACACAAACTTCACTGTGACAGCAAAAGCTGCTGATGATGCAGAATTTGGTGAACTATATATGATCAAATGGACAACACTCTTAATTCCTCCAACAAGTCTTATCATTATTAACCTTGTTGGTGTTGTAGCTGGATTTTCTGATGCACTTAATGGTGGATATGAATCTTGGGGACCACTCATTGGAAAAGTTTTCTTCGCATTTTGGGTGATTTTTCATCTTTATCCATTCCTTAAGGGTCTTATGGGTCGCCAAAACCGTACTCCAACCATTGTTATTCTTTGGTCAGTGCTTTTGGCTTCTGTCTTCTCACTTGTTTGGGTTAAGATTAATCCATTTGTGAGCAAAGTTGATAGTTCAGCTATTTCTCAGACTTGTATTTCTATTGATTGTTAA
Protein sequence

>Msa0235710

MMESGVSFCNSCGEQVGVDANGEVFVACHECYFPICKACVDYETSEGRSVCLRCGNPYADRTRGKDDTKVPANQSTTTAAQISTSQDVGLHARHISTVSTVDSELNDESGNPIWKNRVESWKEKDKKNKKKKEAPKAGNETPVPHEQQMDEMQPSSEAAAAEPLSVIIPVSKSKLGPYRTVIIMRLVILGLFFHYRVTHPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWSPINRVAFTDRLSARFEREGEPCQLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFEIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKREYEEYKVRVNALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGHSGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYSPPSMPPLPKSSSCCCFRSKKPAKDVSELYKDAKREELDAAIFNLREIENYDEYERSMLISQLSFEKTFGLSTVFIESTLMENGGVSESADPSMLIKEAIHVIGCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNIASALFLGLFISIILTSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMIKWTTLLIPPTSLIIINLVGVVAGFSDALNGGYESWGPLIGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFVSKVDSSAISQTCISIDC*