AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0193850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193850 MtrunA17_Chr2g0284211 99.285 979 5 1 1 977 1 979 0.0 2017
Msa0193850 MtrunA17_Chr8g0379241 81.764 998 154 8 1 977 1 991 0.0 1650
Msa0193850 MtrunA17_Chr2g0296991 65.098 1020 293 14 3 970 31 1039 0.0 1326
Msa0193850 MtrunA17_Chr4g0073711 63.221 1006 303 8 9 963 37 1026 0.0 1310
Msa0193850 MtrunA17_Chr3g0088821 66.631 929 280 12 75 977 154 1078 0.0 1262
Msa0193850 MtrunA17_Chr3g0137951 66.810 931 281 13 70 977 162 1087 0.0 1260
Msa0193850 MtrunA17_Chr8g0383701 67.010 873 259 8 110 962 220 1083 0.0 1241
Msa0193850 MtrunA17_Chr8g0352231 67.861 893 263 11 101 977 194 1078 0.0 1233
Msa0193850 MtrunA17_Chr1g0201731 67.281 868 262 6 110 964 228 1086 0.0 1233
Msa0193850 MtrunA17_Chr1g0183381 66.994 815 250 5 158 970 102 899 0.0 1167
Msa0193850 MtrunA17_Chr3g0078671 55.294 1020 396 10 9 977 39 1049 0.0 1157
Msa0193850 MtrunA17_Chr7g0267731 64.834 873 279 7 110 963 111 974 0.0 1151
Msa0193850 MtrunA17_Chr8g0364641 54.359 975 405 14 9 974 37 980 0.0 1121
Msa0193850 MtrunA17_Chr4g0039801 45.437 1030 446 21 12 958 132 1128 0.0 857
Msa0193850 MtrunA17_Chr5g0410641 44.104 1043 446 18 10 958 108 1107 0.0 847
Msa0193850 MtrunA17_Chr7g0269741 48.481 889 360 16 151 958 285 1156 0.0 816
Msa0193850 MtrunA17_Chr1g0165411 43.398 1030 447 21 7 958 118 1089 0.0 807
Msa0193850 MtrunA17_Chr1g0165421 43.528 1043 466 20 7 967 125 1126 0.0 803
Msa0193850 MtrunA17_Chr2g0297351 46.871 879 359 16 162 958 158 1010 0.0 781
Msa0193850 MtrunA17_Chr7g0274751 42.353 850 307 17 162 966 95 806 0.0 606
Msa0193850 MtrunA17_Chr2g0322361 33.771 761 413 15 208 949 52 740 7.98e-130 410
Msa0193850 MtrunA17_Chr3g0102531 34.588 691 359 14 178 859 21 627 1.18e-128 406
Msa0193850 MtrunA17_Chr2g0322371 33.595 765 410 17 208 954 47 731 6.37e-127 402
Msa0193850 MtrunA17_Chr3g0102541 34.421 674 350 13 195 859 38 628 3.79e-125 397
Msa0193850 MtrunA17_Chr4g0046401 32.579 795 442 17 170 949 15 730 1.98e-124 395
Msa0193850 MtrunA17_Chr2g0322351 34.383 762 422 18 195 949 37 727 1.74e-123 393
Msa0193850 MtrunA17_Chr1g0186381 31.034 812 450 17 155 944 2 725 9.68e-120 383
Msa0193850 MtrunA17_Chr4g0025201 32.440 746 421 15 195 928 37 711 4.38e-118 379
Msa0193850 MtrunA17_Chr3g0095791 28.664 771 448 14 172 933 12 689 3.96e-106 345
Msa0193850 MtrunA17_Chr2g0307191 29.058 764 443 13 179 934 19 691 1.19e-103 338
Msa0193850 MtrunA17_Chr2g0298581 29.396 762 441 14 179 933 19 690 2.23e-102 335
Msa0193850 MtrunA17_Chr3g0077511 27.582 765 455 12 179 934 19 693 3.46e-96 318
Msa0193850 MtrunA17_Chr3g0102551 39.552 402 208 10 166 547 7 393 2.04e-88 299
Msa0193850 MtrunA17_Chr3g0102551 30.719 306 195 7 653 946 429 729 1.49e-34 142
Msa0193850 MtrunA17_Chr2g0322341 42.006 319 171 6 195 513 39 343 9.41e-78 258
Msa0193850 MtrunA17_Chr2g0322331 30.163 368 241 7 594 949 8 371 1.25e-47 174
Msa0193850 MtrunA17_Chr3g0126641 44.240 217 90 5 489 686 6 210 1.24e-45 163
Msa0193850 MtrunA17_Chr0c03g0490021 63.934 122 43 1 806 926 1 122 1.92e-43 154
Msa0193850 MtrunA17_Chr2g0307241 33.163 196 111 3 179 374 19 194 4.55e-29 115
Msa0193850 MtrunA17_Chr7g0252781 60.000 85 33 1 893 977 6 89 6.16e-27 105
Msa0193850 MtrunA17_Chr8g0355061 77.778 54 12 0 806 859 1 54 2.61e-24 96.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193850 AT4G18780.1 82.030 985 169 3 1 977 1 985 0.0 1671
Msa0193850 AT5G44030.1 63.163 1037 304 13 9 977 23 1049 0.0 1318
Msa0193850 AT5G44030.2 61.568 1059 314 10 9 977 23 1078 0.0 1310
Msa0193850 AT5G17420.1 63.101 1019 297 11 7 974 35 1025 0.0 1310
Msa0193850 AT5G05170.1 61.392 1049 318 14 9 974 20 1064 0.0 1291
Msa0193850 AT2G25540.1 61.667 1020 318 15 9 961 33 1046 0.0 1288
Msa0193850 AT4G32410.1 61.725 1032 310 13 9 960 39 1065 0.0 1285
Msa0193850 AT5G64740.1 57.696 1059 344 12 9 977 39 1083 0.0 1253
Msa0193850 AT2G21770.1 66.104 888 268 10 110 977 212 1086 0.0 1235
Msa0193850 AT5G09870.1 64.892 883 280 9 110 977 201 1068 0.0 1223
Msa0193850 AT4G39350.1 66.282 866 276 5 110 962 208 1070 0.0 1204
Msa0193850 AT5G44030.3 72.021 772 174 6 245 977 2 770 0.0 1158
Msa0193850 AT5G16910.1 44.831 1035 447 21 12 958 133 1131 0.0 835
Msa0193850 AT3G03050.1 44.306 1045 436 21 12 958 135 1131 0.0 834
Msa0193850 AT1G02730.1 44.455 1019 461 19 30 964 177 1174 0.0 812
Msa0193850 AT4G38190.1 43.520 1034 438 22 11 958 119 1092 0.0 806
Msa0193850 AT2G33100.2 47.026 891 368 16 162 969 166 1035 0.0 794
Msa0193850 AT2G33100.1 47.026 891 368 16 162 969 166 1035 0.0 794
Msa0193850 AT1G32180.1 47.586 870 369 16 164 956 107 966 0.0 783
Msa0193850 AT1G32180.2 47.586 870 369 16 164 956 107 966 0.0 783
Msa0193850 AT2G32530.1 32.919 805 417 24 183 949 24 743 5.50e-118 379
Msa0193850 AT2G32610.1 31.995 797 438 23 186 949 27 752 1.45e-117 378
Msa0193850 AT2G32540.1 32.010 781 421 18 207 954 50 753 3.30e-116 374
Msa0193850 AT2G32620.1 32.979 752 405 17 207 930 50 730 2.47e-115 372
Msa0193850 AT4G15320.5 32.822 783 416 22 179 927 23 729 1.87e-113 367
Msa0193850 AT4G15320.3 34.195 696 372 18 179 863 23 643 1.90e-113 367
Msa0193850 AT4G15320.4 33.474 711 372 19 179 863 23 658 2.09e-109 357
Msa0193850 AT2G32620.3 36.034 580 302 12 207 781 50 565 1.05e-108 350
Msa0193850 AT4G15290.1 32.865 712 382 19 206 892 49 689 1.01e-106 349
Msa0193850 AT2G32620.4 33.143 700 371 17 261 930 2 634 5.26e-104 339
Msa0193850 AT4G15320.2 32.297 740 359 20 179 863 23 675 5.29e-102 337
Msa0193850 AT2G32620.2 35.379 554 287 11 207 755 50 537 1.98e-99 323
Msa0193850 AT4G15320.1 30.612 784 357 22 179 863 23 718 9.95e-94 316
Msa0193850 AT1G55850.1 40.547 402 219 8 150 547 6 391 1.17e-84 288
Msa0193850 AT1G55850.1 31.098 328 197 9 634 946 406 719 5.72e-34 140
Msa0193850 AT4G24010.1 39.594 394 204 11 177 558 25 396 1.69e-78 272
Msa0193850 AT4G24010.1 35.385 260 159 3 647 899 419 676 1.02e-39 159
Msa0193850 AT4G24000.1 37.330 442 235 15 152 581 1 412 2.45e-76 265
Msa0193850 AT4G24000.1 31.329 316 203 5 643 950 405 714 3.47e-41 162
Msa0193850 AT4G23990.1 37.949 390 216 8 177 558 44 415 5.25e-74 259
Msa0193850 AT4G23990.1 32.258 310 196 4 628 930 419 721 9.33e-42 165
Msa0193850 AT4G23990.2 32.258 310 196 4 628 930 205 507 6.17e-42 162
Msa0193850 AT4G23990.2 42.857 203 105 5 363 558 3 201 3.60e-38 151
Msa0193850 AT4G24000.2 33.096 281 177 3 643 917 213 488 1.66e-41 160
Msa0193850 AT4G24000.2 42.544 228 112 8 363 581 3 220 1.75e-41 160

Find 244 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCGACAAGCGCTTTA+TGG 0.152250 2_1:-9710559 Msa0193850:CDS
TCCATTCCTTAAGGGTCTTA+TGG 0.193420 2_1:-9708964 Msa0193850:CDS
GTTAAGGGTCATAGAGTTTA+TGG 0.197162 2_1:-9714281 Msa0193850:five_prime_UTR
TCAACACAAGCCTTACAAAT+TGG 0.207367 2_1:+9714134 None:intergenic
CTTCTGTCTTCTCACTTGTT+TGG 0.216156 2_1:-9708890 Msa0193850:CDS
AATCATGCGGCTCGTAATAT+TGG 0.216166 2_1:-9712487 Msa0193850:CDS
CAACAACAAGATGAAGATTT+TGG 0.225152 2_1:+9710508 None:intergenic
TTTGATCATATGTTATGATA+TGG 0.240907 2_1:-9708758 Msa0193850:three_prime_UTR
TATTCTTTGGTCAGTGCTTT+TGG 0.244414 2_1:-9708913 Msa0193850:CDS
GTGTTACCATAGAAGATTTA+TGG 0.252451 2_1:-9709298 Msa0193850:CDS
TTCTGTCTTCTCACTTGTTT+GGG 0.253330 2_1:-9708889 Msa0193850:CDS
CTCCAACCATTGTTATTCTT+TGG 0.254720 2_1:-9708926 Msa0193850:CDS
CCTCTTTGGTATGGATTTGC+TGG 0.259446 2_1:-9709790 Msa0193850:CDS
GAGTATAGTTTGAGAAGTTA+AGG 0.269367 2_1:-9714297 Msa0193850:five_prime_UTR
CATCCAGTTGATAGTGCTTT+TGG 0.274318 2_1:-9712438 Msa0193850:CDS
CAATGGTTGGAGTACGGTTT+TGG 0.275754 2_1:+9708937 None:intergenic
GATCAATACCATCAAATCTT+TGG 0.280002 2_1:+9710808 None:intergenic
TATGGCGTAACGAGCAGTTC+TGG 0.280519 2_1:-9709280 Msa0193850:CDS
ATTCAGATTGGTTGGATATA+TGG 0.285850 2_1:-9709994 Msa0193850:intron
TTAGTAGACATTGTCCTCTT+TGG 0.288789 2_1:-9709804 Msa0193850:CDS
CTATTGATAGGAGACCATTT+AGG 0.297079 2_1:+9712351 None:intergenic
AACGAGCAGTTCTGGGTAAT+TGG 0.298572 2_1:-9709272 Msa0193850:CDS
CCATTCCTTAAGGGTCTTAT+GGG 0.301598 2_1:-9708963 Msa0193850:CDS
ATCAATACCATCAAATCTTT+GGG 0.308914 2_1:+9710809 None:intergenic
TCATCTTTATCCATTCCTTA+AGG 0.313408 2_1:-9708973 Msa0193850:CDS
CAACACCTGCTAACATCTTT+AGG 0.317097 2_1:+9709210 None:intergenic
CGACCATCCTGGCATGATTC+AGG 0.317609 2_1:-9711422 Msa0193850:intron
TTTCATTGAATCTACACTAA+TGG 0.318286 2_1:-9710220 Msa0193850:CDS
CATCTTTATCCATTCCTTAA+GGG 0.318968 2_1:-9708972 Msa0193850:CDS
CTGGATGTGTAACTCTATAA+TGG 0.320127 2_1:+9712454 None:intergenic
GTAGAATTAAATGATGAGTC+TGG 0.321242 2_1:-9713076 Msa0193850:intron
CTAAATGGTCTCCTATCAAT+AGG 0.324805 2_1:-9712350 Msa0193850:CDS
ATAAAGCTCTGAGACATCTT+TGG 0.326451 2_1:+9710465 None:intergenic
CTTATCATTATTAACCTTGT+TGG 0.328983 2_1:-9709089 Msa0193850:CDS
CCCTTTGAATGCAGGCCTTA+AGG 0.329006 2_1:+9709900 None:intergenic
CCTTTGAATGCAGGCCTTAA+GGG 0.330367 2_1:+9709901 None:intergenic
TCCAACTAATTCTTCCCTTA+AGG 0.333169 2_1:-9714365 Msa0193850:five_prime_UTR
ATGAGTCTGGGAATCCTATC+TGG 0.333861 2_1:-9713063 Msa0193850:CDS
TATTGATAGGAGACCATTTA+GGG 0.334357 2_1:+9712352 None:intergenic
GCTGCTGATGATGCAGAATT+TGG 0.338469 2_1:-9709161 Msa0193850:CDS
TGTTAGATCAGTTCCCTAAA+TGG 0.342957 2_1:-9712365 Msa0193850:CDS
CAAGTTCTTCGATGGGCTCT+TGG 0.344057 2_1:-9709844 Msa0193850:CDS
CAATTTATTGCATGCCCTTA+AGG 0.345404 2_1:-9709915 Msa0193850:CDS
CTGGGTAATTGGAGGTGTTT+CGG 0.353068 2_1:-9709261 Msa0193850:CDS
TGGTCGCGTGAATTATTTCC+TGG 0.359437 2_1:+9711439 None:intergenic
GTTGTTGTGGATTGATTTGC+AGG 0.367203 2_1:+9713590 None:intergenic
GTTACGCCATAAATCTTCTA+TGG 0.368229 2_1:+9709292 None:intergenic
GTCAATGAAGCAATCCTTAA+GGG 0.371344 2_1:+9714351 None:intergenic
AGTATAGTTTGAGAAGTTAA+GGG 0.375942 2_1:-9714296 Msa0193850:five_prime_UTR
TTTGTTTATGTCCAACTTCA+AGG 0.377580 2_1:+9714257 None:intergenic
CTATCAACTTTGCTCACAAA+TGG 0.379764 2_1:+9708855 None:intergenic
CAAGGTAGATAACATGAGTA+TGG 0.387523 2_1:+9708489 None:intergenic
AGGTTACCAACACCACAAAA+AGG 0.388733 2_1:-9711086 Msa0193850:CDS
CCTGTGAGTAGGCAAATTGC+AGG 0.391040 2_1:+9709676 None:intergenic
TGGTGAAGGTGATTGTAGTA+TGG 0.392162 2_1:+9714407 None:intergenic
TTAATAATGATAAGACTTGT+TGG 0.397569 2_1:+9709098 None:intergenic
CTAACATCTTTAGGAATCCT+TGG 0.400962 2_1:+9709219 None:intergenic
TTAATGGTGGATATGAATCT+TGG 0.403290 2_1:-9709040 Msa0193850:CDS
TAATGGTGGATATGAATCTT+GGG 0.404189 2_1:-9709039 Msa0193850:CDS
TCAGAAGATTGACTATTTGA+AGG 0.405314 2_1:-9711850 Msa0193850:CDS
TGCATAGTCCACCCTTCATC+TGG 0.405419 2_1:+9711478 None:intergenic
AGCAGCTGCAGCCTCAGAGG+AGG 0.406357 2_1:+9712572 None:intergenic
ATCTGCTGTTCATGTGGAAC+TGG 0.406720 2_1:+9712959 None:intergenic
GTGACTGAGGATATCTTAAC+GGG 0.408774 2_1:-9709967 Msa0193850:CDS
AGTCAATGAAGCAATCCTTA+AGG 0.413983 2_1:+9714350 None:intergenic
CAACACAAGCCTTACAAATT+GGG 0.414895 2_1:+9714135 None:intergenic
AACCTTGTTGGTGTTGTAGC+TGG 0.415993 2_1:-9709077 Msa0193850:CDS
ATCATGCGGCTCGTAATATT+GGG 0.418633 2_1:-9712486 Msa0193850:CDS
TCTGAAACTGCTGCAGAGAC+TGG 0.423797 2_1:-9709761 Msa0193850:CDS
ATCTATAACCAGTCAATCAT+TGG 0.424845 2_1:+9708589 None:intergenic
CATCTATCATCTGTGAGATC+TGG 0.425614 2_1:-9712404 Msa0193850:CDS
GTGTTATTTCCCAATTTGTA+AGG 0.426117 2_1:-9714144 Msa0193850:CDS
AGACATTGTCCTCTTTGGTA+TGG 0.435333 2_1:-9709799 Msa0193850:CDS
CAAACATCTCTACCAACTAC+TGG 0.436494 2_1:+9710846 None:intergenic
TCCTTAAGGGAAGAATTAGT+TGG 0.438851 2_1:+9714364 None:intergenic
GAATCTTGGGGACCACTCAT+TGG 0.440256 2_1:-9709026 Msa0193850:CDS
GCCTCCTTGATCAGCATTGA+GGG 0.442247 2_1:+9710168 None:intergenic
CCAGTCTCAAAATCGAAACT+TGG 0.446012 2_1:-9712528 Msa0193850:CDS
GGCGACCCATAAGACCCTTA+AGG 0.446918 2_1:+9708958 None:intergenic
TACAATAAGCAACGAGGGGA+AGG 0.448543 2_1:+9709704 None:intergenic
CTACGTTCCTTCACAAAAGA+AGG 0.451548 2_1:+9711816 None:intergenic
GGAGTCTCATTTCCAGCCTT+AGG 0.452035 2_1:+9712980 None:intergenic
GGCGCTGACCCTTTGAATGC+AGG 0.456625 2_1:+9709892 None:intergenic
GTGAACTATATATGATCAAA+TGG 0.460410 2_1:-9709139 Msa0193850:CDS
AAGGAGGCCATTCATGTAAT+CGG 0.462285 2_1:-9710153 Msa0193850:CDS
CTCAGCAGCTGCAGCCTCAG+AGG 0.463990 2_1:+9712569 None:intergenic
TGCTAATGGAGAGGTGTTTG+TGG 0.464871 2_1:-9714177 Msa0193850:CDS
CCCTTAAGGCCTGCATTCAA+AGG 0.466918 2_1:-9709901 Msa0193850:CDS
AGACCAAAAGCACTATCAAC+TGG 0.467986 2_1:+9712435 None:intergenic
CATCCAGTCCCCACATATAC+AGG 0.468316 2_1:+9710586 None:intergenic
AAAGGACTTGACGGCATTCA+AGG 0.471693 2_1:-9710610 Msa0193850:CDS
GTAAAAGCAACCCTATTGAT+AGG 0.471729 2_1:+9712339 None:intergenic
TGCACAGATCAGCACTTCTC+AGG 0.471880 2_1:-9713564 Msa0193850:intron
ATAACATATGATCAAAACTT+TGG 0.473160 2_1:+9708765 None:intergenic
ATGGCGTAACGAGCAGTTCT+GGG 0.474093 2_1:-9709279 Msa0193850:CDS
CAAGTTGGAGTTGATGCTAA+TGG 0.475260 2_1:-9714191 Msa0193850:CDS
ATCAACGGCGGTTCTTTCAA+CGG 0.476719 2_1:+9712065 None:intergenic
ACCTTGTCAGCTTGCTCCTG+TGG 0.476795 2_1:-9712111 Msa0193850:CDS
TATTGTGTATTCAGATTGGT+TGG 0.477209 2_1:-9710002 Msa0193850:intron
CAGCTGACTTTGCAAGAAAG+TGG 0.477475 2_1:-9711929 Msa0193850:CDS
GTTTGCACCAAGTTCTTCGA+TGG 0.479288 2_1:-9709852 Msa0193850:CDS
AGTGGTGCTCACGACATAGA+AGG 0.480957 2_1:-9711154 Msa0193850:CDS
CAAGAGCCCATCGAAGAACT+TGG 0.484396 2_1:+9709845 None:intergenic
TAGAATTAAATGATGAGTCT+GGG 0.484813 2_1:-9713075 Msa0193850:CDS
ACTTTGGCAAGCACAATTGT+TGG 0.485186 2_1:+9708781 None:intergenic
GCCATTCATGTAATCGGTTG+TGG 0.485828 2_1:-9710147 Msa0193850:CDS
CATCGAAGAAAACTGTGTTC+CGG 0.486357 2_1:+9710766 None:intergenic
TAAATGGTCTCCTATCAATA+GGG 0.487621 2_1:-9712349 Msa0193850:CDS
AAACGATCGGAAAGATTGAT+TGG 0.491570 2_1:+9709871 None:intergenic
GAGTTTATGGTCCTTGAAGT+TGG 0.492514 2_1:-9714268 Msa0193850:five_prime_UTR
GTTTCCAGAGAGAAAAGGCC+AGG 0.493523 2_1:-9711106 Msa0193850:CDS
CAGTCAAGATTGAGAATGTA+GGG 0.493558 2_1:+9710927 None:intergenic
GCAGCTGCAGCCTCAGAGGA+GGG 0.494418 2_1:+9712573 None:intergenic
AGTGGAAAGTTGGAAGGAGA+AGG 0.496844 2_1:-9713032 Msa0193850:CDS
TCATGTTATGTTTCAGATGA+TGG 0.497524 2_1:-9711987 Msa0193850:CDS
GTTAATATGAAAGGACTTGA+CGG 0.500626 2_1:-9710619 Msa0193850:CDS
GACCAAAGAATAACAATGGT+TGG 0.504983 2_1:+9708924 None:intergenic
CATTCAAGGACCTGTATATG+TGG 0.505545 2_1:-9710596 Msa0193850:CDS
AGTTAATGCTTTGGTAGCTA+AGG 0.507653 2_1:-9711512 Msa0193850:CDS
GGATCCCTCAATGCTGATCA+AGG 0.508828 2_1:-9710172 Msa0193850:CDS
GGATTGATTTGCAGGAACTT+TGG 0.512377 2_1:+9713598 None:intergenic
AATAATTCACGCGACCATCC+TGG 0.512735 2_1:-9711433 Msa0193850:CDS
TTTCTGATGGATCCAGTAGT+TGG 0.512742 2_1:-9710858 Msa0193850:CDS
TAAAGTCAGAGTTAATGCTT+TGG 0.514285 2_1:-9711521 Msa0193850:CDS
AGTGACTGAGGATATCTTAA+CGG 0.514913 2_1:-9709968 Msa0193850:CDS
AATTGAAATATTATTGGTGA+AGG 0.515318 2_1:+9714393 None:intergenic
CCAGTGTTCTTGAGCTGAGG+TGG 0.517435 2_1:-9709325 Msa0193850:CDS
CCTGCAATTTGCCTACTCAC+AGG 0.518245 2_1:-9709676 Msa0193850:CDS
GAATAACAATGGTTGGAGTA+CGG 0.518540 2_1:+9708931 None:intergenic
TGTAGATAGAACAAGAGGTA+AGG 0.518619 2_1:-9713627 Msa0193850:intron
TGAAGGTGATTGTAGTATGG+TGG 0.519367 2_1:+9714410 None:intergenic
AAGAACTTGGTGCAAACGAT+CGG 0.519660 2_1:+9709858 None:intergenic
ACAGTCAAGATTGAGAATGT+AGG 0.519877 2_1:+9710926 None:intergenic
AAAGAGGACAATGTCTACTA+AGG 0.520358 2_1:+9709806 None:intergenic
GCTCAGAAAACACCAGATGA+AGG 0.520957 2_1:-9711490 Msa0193850:CDS
CAAGATGGAACCTCTTGGCC+AGG 0.521330 2_1:-9711457 Msa0193850:CDS
ACTTGCATTATGTAGGATGT+TGG 0.524011 2_1:-9713226 Msa0193850:intron
AGCTCTGAGACATCTTTGGC+AGG 0.529462 2_1:+9710469 None:intergenic
ATGATTATAACAGTTCTGTA+TGG 0.530674 2_1:+9712504 None:intergenic
CCATGTCAGGTTTGAAAGAG+AGG 0.530844 2_1:-9712138 Msa0193850:intron
TCATCCATCTGCTGTTCATG+TGG 0.531385 2_1:+9712953 None:intergenic
GCCACAACCGATTACATGAA+TGG 0.535283 2_1:+9710146 None:intergenic
CTGGAAACATAGACCAACCT+TGG 0.535961 2_1:+9711121 None:intergenic
CCCATAAGACCCTTAAGGAA+TGG 0.536403 2_1:+9708963 None:intergenic
GGATTCCTAAAGATGTTAGC+AGG 0.539539 2_1:-9709215 Msa0193850:CDS
TTTGCACCAAGTTCTTCGAT+GGG 0.539861 2_1:-9709851 Msa0193850:CDS
AAAGACAGCATGGGGAAAAG+AGG 0.541039 2_1:-9710115 Msa0193850:intron
CTTTGGCAGGCTTCTTTGAG+CGG 0.542540 2_1:+9710482 None:intergenic
CTATGCAAGATGGAACCTCT+TGG 0.544549 2_1:-9711462 Msa0193850:CDS
CGTGAGCACCACTGTGTCCA+AGG 0.546803 2_1:+9711164 None:intergenic
TCAAGATGCAATGTCGTGGA+TGG 0.547900 2_1:-9709942 Msa0193850:CDS
AGATGTGGCAATCCCTATGC+TGG 0.550041 2_1:-9714077 Msa0193850:intron
GAATCTACACTAATGGAGAA+TGG 0.550905 2_1:-9710213 Msa0193850:CDS
TAGTGTTACCATACCAGCAT+AGG 0.558357 2_1:+9714064 None:intergenic
AAATAGAGTGGAAAGTTGGA+AGG 0.558941 2_1:-9713038 Msa0193850:CDS
CAAAGTCAGCTGTCTCCACA+AGG 0.559322 2_1:+9711940 None:intergenic
AGCTGACTTTGCAAGAAAGT+GGG 0.560279 2_1:-9711928 Msa0193850:CDS
CCTTAAGGCCTGCATTCAAA+GGG 0.561090 2_1:-9709900 Msa0193850:CDS
CGAGGGGAAGGGATGTGAAA+GGG 0.562379 2_1:+9709716 None:intergenic
GGCTGGTGCTGAAAATGCAC+TGG 0.563372 2_1:-9711065 Msa0193850:intron
GGCCTCCTTGATCAGCATTG+AGG 0.563747 2_1:+9710167 None:intergenic
ACATTTCAGGTTAATATGAA+AGG 0.564196 2_1:-9710628 Msa0193850:intron
GCTTTATAAAGATGCAAAGA+GGG 0.565584 2_1:-9710449 Msa0193850:CDS
ACGAGGGGAAGGGATGTGAA+AGG 0.568075 2_1:+9709715 None:intergenic
AGGAAACGAACTTCCAAGGT+TGG 0.569266 2_1:-9711134 Msa0193850:CDS
CTTTGGTATGGATTTGCTGG+TGG 0.569669 2_1:-9709787 Msa0193850:CDS
AGATATACCTGAATCATGCC+AGG 0.571408 2_1:+9711415 None:intergenic
TAGAAGGAAACGAACTTCCA+AGG 0.571501 2_1:-9711138 Msa0193850:CDS
GTAGTGATCGATATGCCAAC+CGG 0.572003 2_1:-9710785 Msa0193850:CDS
GAAGGTGATTGTAGTATGGT+GGG 0.574818 2_1:+9714411 None:intergenic
ACTGGAATTATCACTGAAAG+TGG 0.576761 2_1:+9712546 None:intergenic
TCCACAGGAGCAAGCTGACA+AGG 0.577378 2_1:+9712110 None:intergenic
AGATGCAATGTCGTGGATGG+AGG 0.581673 2_1:-9709939 Msa0193850:CDS
AGTTCCACATGAACAGCAGA+TGG 0.583014 2_1:-9712957 Msa0193850:CDS
AACTCTTGTGGTGAACAAGT+TGG 0.583291 2_1:-9714206 Msa0193850:CDS
CTCAGAAAACACCAGATGAA+GGG 0.585547 2_1:-9711489 Msa0193850:CDS
GAGCAGTTCTGGGTAATTGG+AGG 0.587105 2_1:-9709269 Msa0193850:CDS
TTACGGACAGGCTCTCGGCA+AGG 0.587814 2_1:-9712320 Msa0193850:intron
ATTCAAGGACCTGTATATGT+GGG 0.589043 2_1:-9710595 Msa0193850:CDS
TAAAGAGACCAATGATTGAC+TGG 0.589175 2_1:-9708597 Msa0193850:three_prime_UTR
GATCTGTGCAGCCGTTGTTG+TGG 0.589939 2_1:+9713577 None:intergenic
GGACCTGTATATGTGGGGAC+TGG 0.590486 2_1:-9710589 Msa0193850:CDS
CATGTCAGGTTTGAAAGAGA+GGG 0.592103 2_1:-9712137 Msa0193850:intron
TCTATGTTTCCAGAGAGAAA+AGG 0.594564 2_1:-9711111 Msa0193850:CDS
TTCTGAGAGAAGTAAAACTC+AGG 0.597805 2_1:+9711867 None:intergenic
ATAATGATAAGACTTGTTGG+AGG 0.598030 2_1:+9709101 None:intergenic
GCAAACACTACGTCCCTCAC+TGG 0.600483 2_1:+9714103 None:intergenic
CTGTACTGATATGCCTAGCA+TGG 0.603242 2_1:+9713200 None:intergenic
AGTTCTTTCTATCCTTGCCG+TGG 0.604170 2_1:-9712030 Msa0193850:CDS
TTCTTTACCACTGTCCACTG+TGG 0.605231 2_1:+9713174 None:intergenic
AGTGTTACCATACCAGCATA+GGG 0.606549 2_1:+9714065 None:intergenic
AGGATGTTGGACTCCATGCT+AGG 0.607182 2_1:-9713213 Msa0193850:CDS
GCTACGAAGAAAAGACAGCA+TGG 0.608415 2_1:-9710125 Msa0193850:CDS
AATGGTGGATATGAATCTTG+GGG 0.608821 2_1:-9709038 Msa0193850:CDS
CTACGAAGAAAAGACAGCAT+GGG 0.610425 2_1:-9710124 Msa0193850:CDS
CCACCTCAGCTCAAGAACAC+TGG 0.612331 2_1:+9709325 None:intergenic
CAAAGTACAATAAGCAACGA+GGG 0.616695 2_1:+9709699 None:intergenic
CCTTGCCGTGGACTATCCTG+TGG 0.617307 2_1:-9712018 Msa0193850:CDS
ACAATAAGCAACGAGGGGAA+GGG 0.618532 2_1:+9709705 None:intergenic
GAAGAAAACTGTGTTCCGGT+TGG 0.618594 2_1:+9710770 None:intergenic
GAAGGGTGGACTATGCAAGA+TGG 0.623650 2_1:-9711472 Msa0193850:CDS
CGTAGTGTTTGCTTGAGATG+TGG 0.626438 2_1:-9714092 Msa0193850:CDS
CAGACTATGATGAGTATGAG+AGG 0.626804 2_1:-9710296 Msa0193850:CDS
GTACTGACAAAGAAATCCAC+AGG 0.626913 2_1:+9712095 None:intergenic
AAGTAAAACTCAGGTGCACG+TGG 0.627075 2_1:+9711876 None:intergenic
AGGAAAATTCATCATACCAA+CGG 0.627464 2_1:-9709656 Msa0193850:intron
TTGATGATGATTCAATTGCA+AGG 0.628156 2_1:-9708719 Msa0193850:three_prime_UTR
AGCTTTATAAAGATGCAAAG+AGG 0.631014 2_1:-9710450 Msa0193850:CDS
GATATATGGTTCAGTGACTG+AGG 0.631286 2_1:-9709980 Msa0193850:CDS
TACGAAGAAAAGACAGCATG+GGG 0.632594 2_1:-9710123 Msa0193850:CDS
GGGTTCAAGATGCAATGTCG+TGG 0.634201 2_1:-9709946 Msa0193850:CDS
TGAATTATTTCCTGGCCAAG+AGG 0.637280 2_1:+9711447 None:intergenic
ATACCTGAATCATGCCAGGA+TGG 0.638411 2_1:+9711419 None:intergenic
ACTGTGTTAGCTGTGATCAA+CGG 0.640138 2_1:+9712050 None:intergenic
CCAGCAAATCCATACCAAAG+AGG 0.645200 2_1:+9709790 None:intergenic
GCTGACATTTGAATCCCTTG+TGG 0.648985 2_1:-9711955 Msa0193850:CDS
CCACAGGATAGTCCACGGCA+AGG 0.649649 2_1:+9712018 None:intergenic
TGGTGGTGTGTCTGAATCTG+CGG 0.650585 2_1:-9710193 Msa0193850:CDS
AGAAAACACCAGATGAAGGG+TGG 0.652717 2_1:-9711486 Msa0193850:CDS
TCATTATGTTAACAATAGCA+AGG 0.652996 2_1:-9710901 Msa0193850:CDS
TGTAGATTCAATGAAAACAG+TGG 0.654650 2_1:+9710227 None:intergenic
TGCAAATCAATCCACAACAA+CGG 0.656384 2_1:-9713588 Msa0193850:CDS
TCAATACCATCAAATCTTTG+GGG 0.656574 2_1:+9710810 None:intergenic
CACTGACCAAAGAATAACAA+TGG 0.657457 2_1:+9708920 None:intergenic
ACAGAACTGTTATAATCATG+CGG 0.661205 2_1:-9712500 Msa0193850:CDS
TGACCAGTGTTCTTGAGCTG+AGG 0.662591 2_1:-9709328 Msa0193850:CDS
TTCAAGGACCTGTATATGTG+GGG 0.662756 2_1:-9710594 Msa0193850:CDS
GTTCTTGAGCTGAGGTGGAG+CGG 0.667058 2_1:-9709320 Msa0193850:CDS
ATCCAGCTACAACACCAACA+AGG 0.679092 2_1:+9709075 None:intergenic
TGGAGTTGATGCTAATGGAG+AGG 0.686489 2_1:-9714186 Msa0193850:CDS
CAATACCATCAAATCTTTGG+GGG 0.690770 2_1:+9710811 None:intergenic
GGATGTGAAAGGGTAAACGA+TGG 0.692923 2_1:+9709726 None:intergenic
AAAGTACAATAAGCAACGAG+GGG 0.696943 2_1:+9709700 None:intergenic
ACAGTGTCCACAGTGGACAG+TGG 0.698824 2_1:-9713181 Msa0193850:intron
AAAGTCAGCTGTCTCCACAA+GGG 0.704045 2_1:+9711941 None:intergenic
GTGTTAGCTGTGATCAACGG+CGG 0.713429 2_1:+9712053 None:intergenic
AGGGAACTGATCTAACACCC+AGG 0.715025 2_1:+9712371 None:intergenic
GTTGATTATGAGACCAGTGA+GGG 0.718162 2_1:-9714116 Msa0193850:CDS
GCAAAGTACAATAAGCAACG+AGG 0.722782 2_1:+9709698 None:intergenic
TCCCTCAATGCTGATCAAGG+AGG 0.726123 2_1:-9710169 Msa0193850:CDS
TGTTGATTATGAGACCAGTG+AGG 0.750754 2_1:-9714117 Msa0193850:CDS
TCTACACTAATGGAGAATGG+TGG 0.757581 2_1:-9710210 Msa0193850:CDS
TATCAGTACAGTGTCCACAG+TGG 0.762817 2_1:-9713188 Msa0193850:CDS
TGACTGAGGATATCTTAACG+GGG 0.810778 2_1:-9709966 Msa0193850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATTGATATTTAATATTA+TGG + chr2_1:9710261-9710280 None:intergenic 10.0%
!! ACATTTATATTTCCAATATA+TGG - chr2_1:9708967-9708986 Msa0193850:CDS 15.0%
!!! TGGGAAAATATAAATTTTTA+AGG - chr2_1:9709648-9709667 Msa0193850:intron 15.0%
!!! TATAAATTTTTAAGGACAAT+AGG - chr2_1:9709656-9709675 Msa0193850:intron 15.0%
!!! CATTTTATATAATTTTGTTC+AGG + chr2_1:9710090-9710109 None:intergenic 15.0%
!! TTCATATAAAATGAATTGTA+CGG - chr2_1:9711252-9711271 Msa0193850:intron 15.0%
!!! TAATTTTCTCATCTTTATTT+TGG - chr2_1:9713349-9713368 Msa0193850:intron 15.0%
!!! CTTAGTTTTTTATTAGTTAT+TGG + chr2_1:9713497-9713516 None:intergenic 15.0%
!! AATTGAAAAATCATATAACA+AGG + chr2_1:9714514-9714533 None:intergenic 15.0%
!! AATTGAAATATTATTGGTGA+AGG + chr2_1:9708592-9708611 None:intergenic 20.0%
!! TGTACAATCTAATTAAAAAG+AGG - chr2_1:9709180-9709199 Msa0193850:CDS 20.0%
!! ATTATTTGTTTCATTCACTT+AGG - chr2_1:9709271-9709290 Msa0193850:CDS 20.0%
!!! TGCAAAATGAAACAAATTTT+AGG + chr2_1:9709330-9709349 None:intergenic 20.0%
!! TAACATTAGTACATTACAAT+AGG - chr2_1:9709455-9709474 Msa0193850:intron 20.0%
!!! ATTTATATTTTCCCAAAAAC+TGG + chr2_1:9709643-9709662 None:intergenic 20.0%
!! CTTTACACTAAAAGTAAATA+TGG - chr2_1:9710228-9710247 Msa0193850:CDS 20.0%
!!! CACTTGTTTATTATTTTTGT+TGG - chr2_1:9710351-9710370 Msa0193850:intron 20.0%
!!! ATTCATTTTCTTGAAGTATA+AGG + chr2_1:9710715-9710734 None:intergenic 20.0%
!! ACAGTAAAGTAATATCTAAA+TGG - chr2_1:9710748-9710767 Msa0193850:intron 20.0%
!! GTGACATCATTATAATTAAT+TGG - chr2_1:9711706-9711725 Msa0193850:intron 20.0%
!! TATTAAAATGAAAGCTGAAT+CGG + chr2_1:9711776-9711795 None:intergenic 20.0%
!! ACTTTATAGACTCATTAATA+AGG - chr2_1:9712635-9712654 Msa0193850:intron 20.0%
!! TTAATAATGATAAGACTTGT+TGG + chr2_1:9713887-9713906 None:intergenic 20.0%
!! ATAACATATGATCAAAACTT+TGG + chr2_1:9714220-9714239 None:intergenic 20.0%
!! TTTGATCATATGTTATGATA+TGG - chr2_1:9714224-9714243 Msa0193850:CDS 20.0%
!!! TGTAAGCATTTTGAATTATA+AGG - chr2_1:9714322-9714341 Msa0193850:five_prime_UTR 20.0%
!! AGATATCAATGTAAAAATAG+TGG - chr2_1:9714412-9714431 Msa0193850:five_prime_UTR 20.0%
!! TCTCAAACTATACTCTTTTA+TGG + chr2_1:9708680-9708699 None:intergenic 25.0%
! AGTATAGTTTGAGAAGTTAA+GGG - chr2_1:9708686-9708705 Msa0193850:three_prime_UTR 25.0%
! TTGGACATAAACAAAAATGA+TGG - chr2_1:9708733-9708752 Msa0193850:three_prime_UTR 25.0%
!! TAAACAAAAATGATGGAATC+TGG - chr2_1:9708740-9708759 Msa0193850:three_prime_UTR 25.0%
!! TATTTTGTAGATAGAACAAG+AGG - chr2_1:9709350-9709369 Msa0193850:CDS 25.0%
!!! TAACCTTAGTTTTTGAGATT+TGG - chr2_1:9709491-9709510 Msa0193850:intron 25.0%
! TAACTGTTAGATGAAAAGAT+CGG + chr2_1:9709584-9709603 None:intergenic 25.0%
! TAGAATTAAATGATGAGTCT+GGG - chr2_1:9709907-9709926 Msa0193850:CDS 25.0%
! CAAAAAGAACAAGAAGAAAA+AGG - chr2_1:9709974-9709993 Msa0193850:CDS 25.0%
!! GATTTTGCATCAATGTATTA+TGG - chr2_1:9710282-9710301 Msa0193850:CDS 25.0%
! ATCAGAATAAATATTGAGCA+AGG + chr2_1:9710377-9710396 None:intergenic 25.0%
!! TTTATTCTGATCTATTTTGC+AGG - chr2_1:9710386-9710405 Msa0193850:intron 25.0%
! ATGATTATAACAGTTCTGTA+TGG + chr2_1:9710481-9710500 None:intergenic 25.0%
! ACTTCAAGAAAATGAATCAA+TGG - chr2_1:9710718-9710737 Msa0193850:intron 25.0%
!! ATCTCAAACTTTTTGCAAAA+TGG + chr2_1:9711082-9711101 None:intergenic 25.0%
! TTGGCTATAGAATTATTGAA+AGG - chr2_1:9711663-9711682 Msa0193850:intron 25.0%
! TCACATACATCAACAATATT+TGG + chr2_1:9711690-9711709 None:intergenic 25.0%
! ACGCTTATTTCGATTATTAT+AGG - chr2_1:9712003-9712022 Msa0193850:CDS 25.0%
! TCATTATGTTAACAATAGCA+AGG - chr2_1:9712081-9712100 Msa0193850:CDS 25.0%
! ATCAATACCATCAAATCTTT+GGG + chr2_1:9712176-9712195 None:intergenic 25.0%
!!! CATTGACTTTAACAATTATG+AGG - chr2_1:9712287-9712306 Msa0193850:intron 25.0%
!!! ACATTTCAGGTTAATATGAA+AGG - chr2_1:9712354-9712373 Msa0193850:CDS 25.0%
!!! AAGATGAAGATTTTGGTAAT+GGG + chr2_1:9712470-9712489 None:intergenic 25.0%
! CATTAATAAGGCATATCTTT+CGG - chr2_1:9712647-9712666 Msa0193850:intron 25.0%
!!! CTTAGCTTTGAAAAAACATT+TGG - chr2_1:9712727-9712746 Msa0193850:intron 25.0%
! TTTCATTGAATCTACACTAA+TGG - chr2_1:9712762-9712781 Msa0193850:intron 25.0%
! GTGAACTATATATGATCAAA+TGG - chr2_1:9713843-9713862 Msa0193850:intron 25.0%
! CTTATCATTATTAACCTTGT+TGG - chr2_1:9713893-9713912 Msa0193850:intron 25.0%
!! AAAAGTTTTCTTCGCATTTT+GGG - chr2_1:9713979-9713998 Msa0193850:intron 25.0%
! ATTTTCAGAAGTTAAGTGGT+TGG + chr2_1:9708548-9708567 None:intergenic 30.0%
! GTTCATTTTCAGAAGTTAAG+TGG + chr2_1:9708552-9708571 None:intergenic 30.0%
GAGTATAGTTTGAGAAGTTA+AGG - chr2_1:9708685-9708704 Msa0193850:three_prime_UTR 30.0%
TTTGTTTATGTCCAACTTCA+AGG + chr2_1:9708728-9708747 None:intergenic 30.0%
!! GTGTTATTTCCCAATTTGTA+AGG - chr2_1:9708838-9708857 Msa0193850:CDS 30.0%
TAGAATTAGAGTGTACAGTT+AGG + chr2_1:9708946-9708965 None:intergenic 30.0%
GAAGTTACAGATCCATATAT+TGG + chr2_1:9708982-9709001 None:intergenic 30.0%
AGTCCAAATCTCAAAAACTA+AGG + chr2_1:9709497-9709516 None:intergenic 30.0%
TTCACCAAACTTTGATATCT+GGG + chr2_1:9709544-9709563 None:intergenic 30.0%
GTAGAATTAAATGATGAGTC+TGG - chr2_1:9709906-9709925 Msa0193850:CDS 30.0%
ACAGAACTGTTATAATCATG+CGG - chr2_1:9710482-9710501 Msa0193850:CDS 30.0%
TATTGATAGGAGACCATTTA+GGG + chr2_1:9710633-9710652 None:intergenic 30.0%
TAAATGGTCTCCTATCAATA+GGG - chr2_1:9710633-9710652 Msa0193850:intron 30.0%
!!! TATCAATAGGGTTGCTTTTA+CGG - chr2_1:9710645-9710664 Msa0193850:intron 30.0%
AAACTTTATATTGCCATGTC+AGG - chr2_1:9710831-9710850 Msa0193850:CDS 30.0%
!!! TAACATGATACTTTTTCCAC+AGG + chr2_1:9710983-9711002 None:intergenic 30.0%
TCATGTTATGTTTCAGATGA+TGG - chr2_1:9710995-9711014 Msa0193850:intron 30.0%
TCAGAAGATTGACTATTTGA+AGG - chr2_1:9711132-9711151 Msa0193850:CDS 30.0%
AATACTGAATGTCAGAAACA+AGG + chr2_1:9711385-9711404 None:intergenic 30.0%
TAAAGTCAGAGTTAATGCTT+TGG - chr2_1:9711461-9711480 Msa0193850:CDS 30.0%
AATCAAATCTCAATGATGAG+AGG - chr2_1:9711605-9711624 Msa0193850:intron 30.0%
TAATATCTGTTATCATCGTC+AGG - chr2_1:9711791-9711810 Msa0193850:intron 30.0%
TCAATACCATCAAATCTTTG+GGG + chr2_1:9712175-9712194 None:intergenic 30.0%
GATCAATACCATCAAATCTT+TGG + chr2_1:9712177-9712196 None:intergenic 30.0%
TATTAACCTGAAATGTGTCA+AGG + chr2_1:9712350-9712369 None:intergenic 30.0%
GTTAATATGAAAGGACTTGA+CGG - chr2_1:9712363-9712382 Msa0193850:CDS 30.0%
!!! AGATGAAGATTTTGGTAATG+GGG + chr2_1:9712469-9712488 None:intergenic 30.0%
!! CAAGATGAAGATTTTGGTAA+TGG + chr2_1:9712471-9712490 None:intergenic 30.0%
! CAACAACAAGATGAAGATTT+TGG + chr2_1:9712477-9712496 None:intergenic 30.0%
! AGCTTTATAAAGATGCAAAG+AGG - chr2_1:9712532-9712551 Msa0193850:CDS 30.0%
GCTTTATAAAGATGCAAAGA+GGG - chr2_1:9712533-9712552 Msa0193850:CDS 30.0%
!!! ATGCTGCTATTTTTAATCTC+AGG - chr2_1:9712565-9712584 Msa0193850:CDS 30.0%
!!! TGCTGCTATTTTTAATCTCA+GGG - chr2_1:9712566-9712585 Msa0193850:CDS 30.0%
TGTAGATTCAATGAAAACAG+TGG + chr2_1:9712758-9712777 None:intergenic 30.0%
TTATCTTACAAGACACTGAA+AGG + chr2_1:9712929-9712948 None:intergenic 30.0%
TATTGTGTATTCAGATTGGT+TGG - chr2_1:9712980-9712999 Msa0193850:CDS 30.0%
! ATTCAGATTGGTTGGATATA+TGG - chr2_1:9712988-9713007 Msa0193850:CDS 30.0%
AGGAAAATTCATCATACCAA+CGG - chr2_1:9713326-9713345 Msa0193850:intron 30.0%
AAAGATGAGAAAATTACCGT+TGG + chr2_1:9713345-9713364 None:intergenic 30.0%
GTTCTTACATCAAATTGTTG+TGG - chr2_1:9713565-9713584 Msa0193850:CDS 30.0%
GTGTTACCATAGAAGATTTA+TGG - chr2_1:9713684-9713703 Msa0193850:intron 30.0%
!! ATAATGATAAGACTTGTTGG+AGG + chr2_1:9713884-9713903 None:intergenic 30.0%
! GGATTTTCTGATGCATTTAA+TGG - chr2_1:9713926-9713945 Msa0193850:intron 30.0%
! TTTTCTGATGCATTTAATGG+TGG - chr2_1:9713929-9713948 Msa0193850:intron 30.0%
!! TTAATGGTGGATATGAATCT+TGG - chr2_1:9713942-9713961 Msa0193850:intron 30.0%
!! TAATGGTGGATATGAATCTT+GGG - chr2_1:9713943-9713962 Msa0193850:intron 30.0%
! AAGAAAACTTTTCCAATGAG+TGG + chr2_1:9713971-9713990 None:intergenic 30.0%
! GAAAAGTTTTCTTCGCATTT+TGG - chr2_1:9713978-9713997 Msa0193850:intron 30.0%
TCATCTTTATCCATTCCTTA+AGG - chr2_1:9714009-9714028 Msa0193850:intron 30.0%
CATCTTTATCCATTCCTTAA+GGG - chr2_1:9714010-9714029 Msa0193850:intron 30.0%
!! TTGATGATGATTCAATTGCA+AGG - chr2_1:9714263-9714282 Msa0193850:five_prime_UTR 30.0%
! TGTACTTTTATTCCATGCTT+TGG - chr2_1:9714348-9714367 Msa0193850:five_prime_UTR 30.0%
ATCTATAACCAGTCAATCAT+TGG + chr2_1:9714396-9714415 None:intergenic 30.0%
TCCAACTAATTCTTCCCTTA+AGG - chr2_1:9708617-9708636 Msa0193850:three_prime_UTR 35.0%
TCCTTAAGGGAAGAATTAGT+TGG + chr2_1:9708621-9708640 None:intergenic 35.0%
GTCAATGAAGCAATCCTTAA+GGG + chr2_1:9708634-9708653 None:intergenic 35.0%
AGTCAATGAAGCAATCCTTA+AGG + chr2_1:9708635-9708654 None:intergenic 35.0%
GTTAAGGGTCATAGAGTTTA+TGG - chr2_1:9708701-9708720 Msa0193850:three_prime_UTR 35.0%
!!! GTTAGCTTTTGTAACTCTTG+TGG - chr2_1:9708764-9708783 Msa0193850:three_prime_UTR 35.0%
CAACACAAGCCTTACAAATT+GGG + chr2_1:9708850-9708869 None:intergenic 35.0%
TCAACACAAGCCTTACAAAT+TGG + chr2_1:9708851-9708870 None:intergenic 35.0%
!!! ACTTTTCCTTCTAGTTTTCG+TGG - chr2_1:9709008-9709027 Msa0193850:CDS 35.0%
GAATGCTTCAAATCGTTGAA+TGG + chr2_1:9709238-9709257 None:intergenic 35.0%
TGTAGATAGAACAAGAGGTA+AGG - chr2_1:9709355-9709374 Msa0193850:CDS 35.0%
TGCAAATCAATCCACAACAA+CGG - chr2_1:9709394-9709413 Msa0193850:intron 35.0%
CTTCACCAAACTTTGATATC+TGG + chr2_1:9709545-9709564 None:intergenic 35.0%
! AGAATCTAGGTCCAGTTTTT+GGG - chr2_1:9709629-9709648 Msa0193850:intron 35.0%
AACCTCTACTTGCATTATGT+AGG - chr2_1:9709749-9709768 Msa0193850:CDS 35.0%
ATCCTACATAATGCAAGTAG+AGG + chr2_1:9709754-9709773 None:intergenic 35.0%
ACTTGCATTATGTAGGATGT+TGG - chr2_1:9709756-9709775 Msa0193850:CDS 35.0%
TCCTATCTGGAAAAATAGAG+TGG - chr2_1:9709932-9709951 Msa0193850:CDS 35.0%
!! TCCACTCTATTTTTCCAGAT+AGG + chr2_1:9709936-9709955 None:intergenic 35.0%
GGAAAAATAGAGTGGAAAGT+TGG - chr2_1:9709940-9709959 Msa0193850:CDS 35.0%
AAATAGAGTGGAAAGTTGGA+AGG - chr2_1:9709944-9709963 Msa0193850:CDS 35.0%
GATGAAATGCAGTAAGTTCA+AGG - chr2_1:9710047-9710066 Msa0193850:intron 35.0%
ACTGGAATTATCACTGAAAG+TGG + chr2_1:9710439-9710458 None:intergenic 35.0%
CTGGATGTGTAACTCTATAA+TGG + chr2_1:9710531-9710550 None:intergenic 35.0%
TGTTAGATCAGTTCCCTAAA+TGG - chr2_1:9710617-9710636 Msa0193850:CDS 35.0%
CTATTGATAGGAGACCATTT+AGG + chr2_1:9710634-9710653 None:intergenic 35.0%
CTAAATGGTCTCCTATCAAT+AGG - chr2_1:9710632-9710651 Msa0193850:intron 35.0%
GTAAAAGCAACCCTATTGAT+AGG + chr2_1:9710646-9710665 None:intergenic 35.0%
CAAGGTAATTGGAAGCTATT+TGG - chr2_1:9710680-9710699 Msa0193850:intron 35.0%
! TTCTGAGAGAAGTAAAACTC+AGG + chr2_1:9711118-9711137 None:intergenic 35.0%
! AGTTCAACCTTCTTTTGTGA+AGG - chr2_1:9711159-9711178 Msa0193850:CDS 35.0%
! AGTTAATGCTTTGGTAGCTA+AGG - chr2_1:9711470-9711489 Msa0193850:CDS 35.0%
TCTATGTTTCCAGAGAGAAA+AGG - chr2_1:9711871-9711890 Msa0193850:CDS 35.0%
! TAAGCTCGTCAAGATTTTGT+AGG - chr2_1:9711975-9711994 Msa0193850:CDS 35.0%
! AAGCTCGTCAAGATTTTGTA+GGG - chr2_1:9711976-9711995 Msa0193850:CDS 35.0%
CAGTCAAGATTGAGAATGTA+GGG + chr2_1:9712058-9712077 None:intergenic 35.0%
ACAGTCAAGATTGAGAATGT+AGG + chr2_1:9712059-9712078 None:intergenic 35.0%
CAATACCATCAAATCTTTGG+GGG + chr2_1:9712174-9712193 None:intergenic 35.0%
CAATTATGAGGCGAAAATCA+TGG - chr2_1:9712299-9712318 Msa0193850:intron 35.0%
TTCTAACCTTGACACATTTC+AGG - chr2_1:9712341-9712360 Msa0193850:CDS 35.0%
ATTCAAGGACCTGTATATGT+GGG - chr2_1:9712387-9712406 Msa0193850:CDS 35.0%
!!! GATGAAGATTTTGGTAATGG+GGG + chr2_1:9712468-9712487 None:intergenic 35.0%
!! ATAAAGCTCTGAGACATCTT+TGG + chr2_1:9712520-9712539 None:intergenic 35.0%
GAATCTACACTAATGGAGAA+TGG - chr2_1:9712769-9712788 Msa0193850:intron 35.0%
TCTGAATACACAATACAGCA+AGG + chr2_1:9712975-9712994 None:intergenic 35.0%
GCTGTATTGTGTATTCAGAT+TGG - chr2_1:9712976-9712995 Msa0193850:CDS 35.0%
AGTGACTGAGGATATCTTAA+CGG - chr2_1:9713014-9713033 Msa0193850:CDS 35.0%
CAATTTATTGCATGCCCTTA+AGG - chr2_1:9713067-9713086 Msa0193850:CDS 35.0%
AAACGATCGGAAAGATTGAT+TGG + chr2_1:9713114-9713133 None:intergenic 35.0%
AAAGAGGACAATGTCTACTA+AGG + chr2_1:9713179-9713198 None:intergenic 35.0%
TTAGTAGACATTGTCCTCTT+TGG - chr2_1:9713178-9713197 Msa0193850:intron 35.0%
AAAGTACAATAAGCAACGAG+GGG + chr2_1:9713285-9713304 None:intergenic 35.0%
CAAAGTACAATAAGCAACGA+GGG + chr2_1:9713286-9713305 None:intergenic 35.0%
! TGATGAATTTTCCTGTGAGT+AGG + chr2_1:9713320-9713339 None:intergenic 35.0%
!!! ATTGCAAGTGCACTTTTTCT+TGG - chr2_1:9713611-9713630 Msa0193850:CDS 35.0%
GTTACGCCATAAATCTTCTA+TGG + chr2_1:9713693-9713712 None:intergenic 35.0%
! CTAACATCTTTAGGAATCCT+TGG + chr2_1:9713766-9713785 None:intergenic 35.0%
!! AATGGTGGATATGAATCTTG+GGG - chr2_1:9713944-9713963 Msa0193850:intron 35.0%
GAATAACAATGGTTGGAGTA+CGG + chr2_1:9714054-9714073 None:intergenic 35.0%
! CTCCAACCATTGTTATTCTT+TGG - chr2_1:9714056-9714075 Msa0193850:intron 35.0%
GACCAAAGAATAACAATGGT+TGG + chr2_1:9714061-9714080 None:intergenic 35.0%
CACTGACCAAAGAATAACAA+TGG + chr2_1:9714065-9714084 None:intergenic 35.0%
! TATTCTTTGGTCAGTGCTTT+TGG - chr2_1:9714069-9714088 Msa0193850:intron 35.0%
TTCTGTCTTCTCACTTGTTT+GGG - chr2_1:9714093-9714112 Msa0193850:CDS 35.0%
CTATCAACTTTGCTCACAAA+TGG + chr2_1:9714130-9714149 None:intergenic 35.0%
CAGAAAAATTGTCCAAAGCA+TGG + chr2_1:9714363-9714382 None:intergenic 35.0%
TAAAGAGACCAATGATTGAC+TGG - chr2_1:9714385-9714404 Msa0193850:five_prime_UTR 35.0%
CAAGGTAGATAACATGAGTA+TGG + chr2_1:9714496-9714515 None:intergenic 35.0%
GAAGGTGATTGTAGTATGGT+GGG + chr2_1:9708574-9708593 None:intergenic 40.0%
TGAAGGTGATTGTAGTATGG+TGG + chr2_1:9708575-9708594 None:intergenic 40.0%
TGGTGAAGGTGATTGTAGTA+TGG + chr2_1:9708578-9708597 None:intergenic 40.0%
GAGTTTATGGTCCTTGAAGT+TGG - chr2_1:9708714-9708733 Msa0193850:three_prime_UTR 40.0%
AACTCTTGTGGTGAACAAGT+TGG - chr2_1:9708776-9708795 Msa0193850:three_prime_UTR 40.0%
!! CAAGTTGGAGTTGATGCTAA+TGG - chr2_1:9708791-9708810 Msa0193850:three_prime_UTR 40.0%
! TGTTGATTATGAGACCAGTG+AGG - chr2_1:9708865-9708884 Msa0193850:CDS 40.0%
GTTGATTATGAGACCAGTGA+GGG - chr2_1:9708866-9708885 Msa0193850:CDS 40.0%
AGTGTTACCATACCAGCATA+GGG + chr2_1:9708920-9708939 None:intergenic 40.0%
TAGTGTTACCATACCAGCAT+AGG + chr2_1:9708921-9708940 None:intergenic 40.0%
TGGCATGGTTGTATTTGACT+TGG - chr2_1:9709028-9709047 Msa0193850:CDS 40.0%
!! GGATTGATTTGCAGGAACTT+TGG + chr2_1:9709387-9709406 None:intergenic 40.0%
!! GTTGTTGTGGATTGATTTGC+AGG + chr2_1:9709395-9709414 None:intergenic 40.0%
CGATCCCAGATATCAAAGTT+TGG - chr2_1:9709537-9709556 Msa0193850:intron 40.0%
AAGATCGGATGACTCATACT+AGG + chr2_1:9709569-9709588 None:intergenic 40.0%
! GAGAATCTAGGTCCAGTTTT+TGG - chr2_1:9709628-9709647 Msa0193850:intron 40.0%
!! GAAGAAAAAGGAAGCACCTA+AGG - chr2_1:9709986-9710005 Msa0193850:CDS 40.0%
TGCAGTAAGTTCAAGGAGAA+AGG - chr2_1:9710054-9710073 Msa0193850:intron 40.0%
!!! CCAAGTTTCGATTTTGAGAC+TGG + chr2_1:9710457-9710476 None:intergenic 40.0%
CCAGTCTCAAAATCGAAACT+TGG - chr2_1:9710454-9710473 Msa0193850:CDS 40.0%
AATCATGCGGCTCGTAATAT+TGG - chr2_1:9710495-9710514 Msa0193850:CDS 40.0%
ATCATGCGGCTCGTAATATT+GGG - chr2_1:9710496-9710515 Msa0193850:CDS 40.0%
!!! CATCCAGTTGATAGTGCTTT+TGG - chr2_1:9710544-9710563 Msa0193850:CDS 40.0%
!! AGACCAAAAGCACTATCAAC+TGG + chr2_1:9710550-9710569 None:intergenic 40.0%
!!! TTGATAGTGCTTTTGGTCTG+TGG - chr2_1:9710551-9710570 Msa0193850:CDS 40.0%
CATCTATCATCTGTGAGATC+TGG - chr2_1:9710578-9710597 Msa0193850:CDS 40.0%
!!! AGATCTGGTTTGCTTTTTCC+TGG - chr2_1:9710593-9710612 Msa0193850:CDS 40.0%
!!! GATCTGGTTTGCTTTTTCCT+GGG - chr2_1:9710594-9710613 Msa0193850:CDS 40.0%
CATGTCAGGTTTGAAAGAGA+GGG - chr2_1:9710845-9710864 Msa0193850:CDS 40.0%
! GTACTGACAAAGAAATCCAC+AGG + chr2_1:9710890-9710909 None:intergenic 40.0%
ACTGTGTTAGCTGTGATCAA+CGG + chr2_1:9710935-9710954 None:intergenic 40.0%
! TTTTTCCACAGGATAGTCCA+CGG + chr2_1:9710972-9710991 None:intergenic 40.0%
! AGCTGACTTTGCAAGAAAGT+GGG - chr2_1:9711054-9711073 Msa0193850:intron 40.0%
CTACGTTCCTTCACAAAAGA+AGG + chr2_1:9711169-9711188 None:intergenic 40.0%
ACTGAATGTCAGAAACAAGG+TGG + chr2_1:9711382-9711401 None:intergenic 40.0%
CTCAGAAAACACCAGATGAA+GGG - chr2_1:9711493-9711512 Msa0193850:CDS 40.0%
TGAATTATTTCCTGGCCAAG+AGG + chr2_1:9711538-9711557 None:intergenic 40.0%
AGATATACCTGAATCATGCC+AGG + chr2_1:9711570-9711589 None:intergenic 40.0%
! GATACCTAGTTTGTGCAACT+TGG - chr2_1:9711644-9711663 Msa0193850:intron 40.0%
ATAGCCAAGTTGCACAAACT+AGG + chr2_1:9711651-9711670 None:intergenic 40.0%
! TATCATCGTCAGGTTTTCCT+TGG - chr2_1:9711801-9711820 Msa0193850:intron 40.0%
TAGAAGGAAACGAACTTCCA+AGG - chr2_1:9711844-9711863 Msa0193850:CDS 40.0%
!!! TTTTTGTGGTGTTGGTAACC+TGG + chr2_1:9711897-9711916 None:intergenic 40.0%
AGGTTACCAACACCACAAAA+AGG - chr2_1:9711896-9711915 Msa0193850:CDS 40.0%
! AGAAGCGATGTGTTTTCTGA+TGG - chr2_1:9712111-9712130 Msa0193850:CDS 40.0%
! TTTCTGATGGATCCAGTAGT+TGG - chr2_1:9712124-9712143 Msa0193850:CDS 40.0%
CAAACATCTCTACCAACTAC+TGG + chr2_1:9712139-9712158 None:intergenic 40.0%
CATCGAAGAAAACTGTGTTC+CGG + chr2_1:9712219-9712238 None:intergenic 40.0%
CATTCAAGGACCTGTATATG+TGG - chr2_1:9712386-9712405 Msa0193850:CDS 40.0%
TTCAAGGACCTGTATATGTG+GGG - chr2_1:9712388-9712407 Msa0193850:CDS 40.0%
TTCAATCGACAAGCGCTTTA+TGG - chr2_1:9712423-9712442 Msa0193850:CDS 40.0%
CAGACTATGATGAGTATGAG+AGG - chr2_1:9712686-9712705 Msa0193850:intron 40.0%
TCTACACTAATGGAGAATGG+TGG - chr2_1:9712772-9712791 Msa0193850:intron 40.0%
AAGGAGGCCATTCATGTAAT+CGG - chr2_1:9712829-9712848 Msa0193850:intron 40.0%
CTACGAAGAAAAGACAGCAT+GGG - chr2_1:9712858-9712877 Msa0193850:intron 40.0%
TACGAAGAAAAGACAGCATG+GGG - chr2_1:9712859-9712878 Msa0193850:intron 40.0%
GATATATGGTTCAGTGACTG+AGG - chr2_1:9713002-9713021 Msa0193850:CDS 40.0%
GTGACTGAGGATATCTTAAC+GGG - chr2_1:9713015-9713034 Msa0193850:CDS 40.0%
TGACTGAGGATATCTTAACG+GGG - chr2_1:9713016-9713035 Msa0193850:CDS 40.0%
!! AAGAACTTGGTGCAAACGAT+CGG + chr2_1:9713127-9713146 None:intergenic 40.0%
TTTGCACCAAGTTCTTCGAT+GGG - chr2_1:9713131-9713150 Msa0193850:intron 40.0%
AGACATTGTCCTCTTTGGTA+TGG - chr2_1:9713183-9713202 Msa0193850:CDS 40.0%
GCAAAGTACAATAAGCAACG+AGG + chr2_1:9713287-9713306 None:intergenic 40.0%
!! CATCTTTTTGCTGTCTTCCA+AGG - chr2_1:9713746-9713765 Msa0193850:intron 40.0%
GGATTCCTAAAGATGTTAGC+AGG - chr2_1:9713767-9713786 Msa0193850:intron 40.0%
CAACACCTGCTAACATCTTT+AGG + chr2_1:9713775-9713794 None:intergenic 40.0%
TCCATTCCTTAAGGGTCTTA+TGG - chr2_1:9714018-9714037 Msa0193850:intron 40.0%
! CCATTCCTTAAGGGTCTTAT+GGG - chr2_1:9714019-9714038 Msa0193850:intron 40.0%
CTTCTGTCTTCTCACTTGTT+TGG - chr2_1:9714092-9714111 Msa0193850:CDS 40.0%
ACTTTGGCAAGCACAATTGT+TGG + chr2_1:9714204-9714223 None:intergenic 40.0%
!! TGGAGTTGATGCTAATGGAG+AGG - chr2_1:9708796-9708815 Msa0193850:exon 45.0%
!! TGCTAATGGAGAGGTGTTTG+TGG - chr2_1:9708805-9708824 Msa0193850:exon 45.0%
CGTAGTGTTTGCTTGAGATG+TGG - chr2_1:9708890-9708909 Msa0193850:CDS 45.0%
!!! TCCTTCTAGTTTTCGTGGCA+TGG - chr2_1:9709013-9709032 Msa0193850:CDS 45.0%
ACCATGCCACGAAAACTAGA+AGG + chr2_1:9709017-9709036 None:intergenic 45.0%
TACAGCACTGCAGAGAATCT+AGG - chr2_1:9709616-9709635 Msa0193850:intron 45.0%
! CTGTACTGATATGCCTAGCA+TGG + chr2_1:9709785-9709804 None:intergenic 45.0%
TATCAGTACAGTGTCCACAG+TGG - chr2_1:9709794-9709813 Msa0193850:CDS 45.0%
TTCTTTACCACTGTCCACTG+TGG + chr2_1:9709811-9709830 None:intergenic 45.0%
ATGAGTCTGGGAATCCTATC+TGG - chr2_1:9709919-9709938 Msa0193850:CDS 45.0%
AGTGGAAAGTTGGAAGGAGA+AGG - chr2_1:9709950-9709969 Msa0193850:CDS 45.0%
!! AAAAAGGAAGCACCTAAGGC+TGG - chr2_1:9709990-9710009 Msa0193850:CDS 45.0%
ATCTGCTGTTCATGTGGAAC+TGG + chr2_1:9710026-9710045 None:intergenic 45.0%
AGTTCCACATGAACAGCAGA+TGG - chr2_1:9710025-9710044 Msa0193850:intron 45.0%
TCATCCATCTGCTGTTCATG+TGG + chr2_1:9710032-9710051 None:intergenic 45.0%
TTCGTGCAATTACAACGACG+TGG + chr2_1:9710309-9710328 None:intergenic 45.0%
!!! ATAGGGTTGCTTTTACGGAC+AGG - chr2_1:9710650-9710669 Msa0193850:intron 45.0%
CCTCTCTTTCAAACCTGACA+TGG + chr2_1:9710847-9710866 None:intergenic 45.0%
CCATGTCAGGTTTGAAAGAG+AGG - chr2_1:9710844-9710863 Msa0193850:CDS 45.0%
ATCAACGGCGGTTCTTTCAA+CGG + chr2_1:9710920-9710939 None:intergenic 45.0%
AGTTCTTTCTATCCTTGCCG+TGG - chr2_1:9710952-9710971 Msa0193850:CDS 45.0%
GCTGACATTTGAATCCCTTG+TGG - chr2_1:9711027-9711046 Msa0193850:intron 45.0%
AAAGTCAGCTGTCTCCACAA+GGG + chr2_1:9711044-9711063 None:intergenic 45.0%
! CAGCTGACTTTGCAAGAAAG+TGG - chr2_1:9711053-9711072 Msa0193850:intron 45.0%
AAGTAAAACTCAGGTGCACG+TGG + chr2_1:9711109-9711128 None:intergenic 45.0%
GCTCAGAAAACACCAGATGA+AGG - chr2_1:9711492-9711511 Msa0193850:CDS 45.0%
AGAAAACACCAGATGAAGGG+TGG - chr2_1:9711496-9711515 Msa0193850:CDS 45.0%
CTATGCAAGATGGAACCTCT+TGG - chr2_1:9711520-9711539 Msa0193850:CDS 45.0%
TGGTCGCGTGAATTATTTCC+TGG + chr2_1:9711546-9711565 None:intergenic 45.0%
AATAATTCACGCGACCATCC+TGG - chr2_1:9711549-9711568 Msa0193850:intron 45.0%
ATACCTGAATCATGCCAGGA+TGG + chr2_1:9711566-9711585 None:intergenic 45.0%
AGGAAACGAACTTCCAAGGT+TGG - chr2_1:9711848-9711867 Msa0193850:CDS 45.0%
CTGGAAACATAGACCAACCT+TGG + chr2_1:9711864-9711883 None:intergenic 45.0%
TACCAACACCACAAAAAGGC+TGG - chr2_1:9711900-9711919 Msa0193850:CDS 45.0%
! TTTCAGCACCAGCCTTTTTG+TGG + chr2_1:9711911-9711930 None:intergenic 45.0%
CAGTTCCCCCAAAGATTTGA+TGG - chr2_1:9712166-9712185 Msa0193850:intron 45.0%
GTAGTGATCGATATGCCAAC+CGG - chr2_1:9712197-9712216 Msa0193850:intron 45.0%
GAAGAAAACTGTGTTCCGGT+TGG + chr2_1:9712215-9712234 None:intergenic 45.0%
AAAGGACTTGACGGCATTCA+AGG - chr2_1:9712372-9712391 Msa0193850:CDS 45.0%
!! TTTGGTAATGGGGGCATAGA+AGG + chr2_1:9712459-9712478 None:intergenic 45.0%
GCCATTCATGTAATCGGTTG+TGG - chr2_1:9712835-9712854 Msa0193850:intron 45.0%
GCCACAACCGATTACATGAA+TGG + chr2_1:9712839-9712858 None:intergenic 45.0%
GCTACGAAGAAAAGACAGCA+TGG - chr2_1:9712857-9712876 Msa0193850:intron 45.0%
AAAGACAGCATGGGGAAAAG+AGG - chr2_1:9712867-9712886 Msa0193850:intron 45.0%
TCAAGATGCAATGTCGTGGA+TGG - chr2_1:9713040-9713059 Msa0193850:CDS 45.0%
CCTTTGAATGCAGGCCTTAA+GGG + chr2_1:9713084-9713103 None:intergenic 45.0%
CCTTAAGGCCTGCATTCAAA+GGG - chr2_1:9713082-9713101 Msa0193850:intron 45.0%
GTTTGCACCAAGTTCTTCGA+TGG - chr2_1:9713130-9713149 Msa0193850:intron 45.0%
CCAGCAAATCCATACCAAAG+AGG + chr2_1:9713195-9713214 None:intergenic 45.0%
CCTCTTTGGTATGGATTTGC+TGG - chr2_1:9713192-9713211 Msa0193850:CDS 45.0%
!! CTTTGGTATGGATTTGCTGG+TGG - chr2_1:9713195-9713214 Msa0193850:CDS 45.0%
GGATGTGAAAGGGTAAACGA+TGG + chr2_1:9713259-9713278 None:intergenic 45.0%
ACAATAAGCAACGAGGGGAA+GGG + chr2_1:9713280-9713299 None:intergenic 45.0%
TACAATAAGCAACGAGGGGA+AGG + chr2_1:9713281-9713300 None:intergenic 45.0%
!! AACGAGCAGTTCTGGGTAAT+TGG - chr2_1:9713710-9713729 Msa0193850:intron 45.0%
!! CTGGGTAATTGGAGGTGTTT+CGG - chr2_1:9713721-9713740 Msa0193850:intron 45.0%
! GCTGCTGATGATGCAGAATT+TGG - chr2_1:9713821-9713840 Msa0193850:intron 45.0%
!! AACCTTGTTGGTGTTGTAGC+TGG - chr2_1:9713905-9713924 Msa0193850:intron 45.0%
ATCCAGCTACAACACCAACA+AGG + chr2_1:9713910-9713929 None:intergenic 45.0%
CCCATAAGACCCTTAAGGAA+TGG + chr2_1:9714022-9714041 None:intergenic 45.0%
! CAATGGTTGGAGTACGGTTT+TGG + chr2_1:9714048-9714067 None:intergenic 45.0%
!! AAAAAAAATTGAAATATTAT+TGG + chr2_1:9708598-9708617 None:intergenic 5.0%
AGATGTGGCAATCCCTATGC+TGG - chr2_1:9708905-9708924 Msa0193850:CDS 50.0%
TGGCAATCCCTATGCTGGTA+TGG - chr2_1:9708910-9708929 Msa0193850:CDS 50.0%
TGCACAGATCAGCACTTCTC+AGG - chr2_1:9709418-9709437 Msa0193850:intron 50.0%
AGGATGTTGGACTCCATGCT+AGG - chr2_1:9709769-9709788 Msa0193850:CDS 50.0%
GGAGTCTCATTTCCAGCCTT+AGG + chr2_1:9710005-9710024 None:intergenic 50.0%
AGGGAACTGATCTAACACCC+AGG + chr2_1:9710614-9710633 None:intergenic 50.0%
! TGCTTTTACGGACAGGCTCT+CGG - chr2_1:9710657-9710676 Msa0193850:intron 50.0%
GTGTTAGCTGTGATCAACGG+CGG + chr2_1:9710932-9710951 None:intergenic 50.0%
CAAAGTCAGCTGTCTCCACA+AGG + chr2_1:9711045-9711064 None:intergenic 50.0%
TGCATAGTCCACCCTTCATC+TGG + chr2_1:9711507-9711526 None:intergenic 50.0%
!! GAAGGGTGGACTATGCAAGA+TGG - chr2_1:9711510-9711529 Msa0193850:CDS 50.0%
! CAGGTTTTCCTTGGACACAG+TGG - chr2_1:9711810-9711829 Msa0193850:CDS 50.0%
AGTGGTGCTCACGACATAGA+AGG - chr2_1:9711828-9711847 Msa0193850:CDS 50.0%
GTTTCCAGAGAGAAAAGGCC+AGG - chr2_1:9711876-9711895 Msa0193850:CDS 50.0%
!! GTAACCTGGCCTTTTCTCTC+TGG + chr2_1:9711883-9711902 None:intergenic 50.0%
! CACCAGCCTTTTTGTGGTGT+TGG + chr2_1:9711905-9711924 None:intergenic 50.0%
CATCCAGTCCCCACATATAC+AGG + chr2_1:9712399-9712418 None:intergenic 50.0%
CTTTGGCAGGCTTCTTTGAG+CGG + chr2_1:9712503-9712522 None:intergenic 50.0%
!! AGCTCTGAGACATCTTTGGC+AGG + chr2_1:9712516-9712535 None:intergenic 50.0%
! TGGTGGTGTGTCTGAATCTG+CGG - chr2_1:9712789-9712808 Msa0193850:intron 50.0%
GGATCCCTCAATGCTGATCA+AGG - chr2_1:9712810-9712829 Msa0193850:intron 50.0%
TCCCTCAATGCTGATCAAGG+AGG - chr2_1:9712813-9712832 Msa0193850:intron 50.0%
! GCCTCCTTGATCAGCATTGA+GGG + chr2_1:9712817-9712836 None:intergenic 50.0%
CAGCATGGGGAAAAGAGGTT+AGG - chr2_1:9712872-9712891 Msa0193850:intron 50.0%
GGGTTCAAGATGCAATGTCG+TGG - chr2_1:9713036-9713055 Msa0193850:CDS 50.0%
AGATGCAATGTCGTGGATGG+AGG - chr2_1:9713043-9713062 Msa0193850:CDS 50.0%
CCCTTAAGGCCTGCATTCAA+AGG - chr2_1:9713081-9713100 Msa0193850:intron 50.0%
CCCTTTGAATGCAGGCCTTA+AGG + chr2_1:9713085-9713104 None:intergenic 50.0%
CAAGAGCCCATCGAAGAACT+TGG + chr2_1:9713140-9713159 None:intergenic 50.0%
! CAAGTTCTTCGATGGGCTCT+TGG - chr2_1:9713138-9713157 Msa0193850:intron 50.0%
! TCTGAAACTGCTGCAGAGAC+TGG - chr2_1:9713221-9713240 Msa0193850:intron 50.0%
CCTGTGAGTAGGCAAATTGC+AGG + chr2_1:9713309-9713328 None:intergenic 50.0%
CCTGCAATTTGCCTACTCAC+AGG - chr2_1:9713306-9713325 Msa0193850:intron 50.0%
TGACCAGTGTTCTTGAGCTG+AGG - chr2_1:9713654-9713673 Msa0193850:intron 50.0%
TATGGCGTAACGAGCAGTTC+TGG - chr2_1:9713702-9713721 Msa0193850:intron 50.0%
ATGGCGTAACGAGCAGTTCT+GGG - chr2_1:9713703-9713722 Msa0193850:intron 50.0%
!! GAGCAGTTCTGGGTAATTGG+AGG - chr2_1:9713713-9713732 Msa0193850:intron 50.0%
GAATCTTGGGGACCACTCAT+TGG - chr2_1:9713956-9713975 Msa0193850:intron 50.0%
GCAAACACTACGTCCCTCAC+TGG + chr2_1:9708882-9708901 None:intergenic 55.0%
GATCTGTGCAGCCGTTGTTG+TGG + chr2_1:9709408-9709427 None:intergenic 55.0%
ACAGTGTCCACAGTGGACAG+TGG - chr2_1:9709801-9709820 Msa0193850:CDS 55.0%
! ATTTTGCAGGCCCTCCTCTG+AGG - chr2_1:9710399-9710418 Msa0193850:intron 55.0%
CAGGCTCTCGGCAAGGTAAT+TGG - chr2_1:9710669-9710688 Msa0193850:intron 55.0%
! ACCTTGTCAGCTTGCTCCTG+TGG - chr2_1:9710871-9710890 Msa0193850:CDS 55.0%
TCCACAGGAGCAAGCTGACA+AGG + chr2_1:9710875-9710894 None:intergenic 55.0%
CAAGATGGAACCTCTTGGCC+AGG - chr2_1:9711525-9711544 Msa0193850:CDS 55.0%
CGACCATCCTGGCATGATTC+AGG - chr2_1:9711560-9711579 Msa0193850:intron 55.0%
! GGCTGGTGCTGAAAATGCAC+TGG - chr2_1:9711917-9711936 Msa0193850:CDS 55.0%
GGACCTGTATATGTGGGGAC+TGG - chr2_1:9712393-9712412 Msa0193850:CDS 55.0%
!! GGTAATGGGGGCATAGAAGG+TGG + chr2_1:9712456-9712475 None:intergenic 55.0%
GGCCTCCTTGATCAGCATTG+AGG + chr2_1:9712818-9712837 None:intergenic 55.0%
CGAGGGGAAGGGATGTGAAA+GGG + chr2_1:9713269-9713288 None:intergenic 55.0%
ACGAGGGGAAGGGATGTGAA+AGG + chr2_1:9713270-9713289 None:intergenic 55.0%
CCACCTCAGCTCAAGAACAC+TGG + chr2_1:9713660-9713679 None:intergenic 55.0%
CCAGTGTTCTTGAGCTGAGG+TGG - chr2_1:9713657-9713676 Msa0193850:intron 55.0%
GTTCTTGAGCTGAGGTGGAG+CGG - chr2_1:9713662-9713681 Msa0193850:intron 55.0%
GGCGACCCATAAGACCCTTA+AGG + chr2_1:9714027-9714046 None:intergenic 55.0%
TTACGGACAGGCTCTCGGCA+AGG - chr2_1:9710662-9710681 Msa0193850:intron 60.0%
CCACAGGATAGTCCACGGCA+AGG + chr2_1:9710967-9710986 None:intergenic 60.0%
! CCTTGCCGTGGACTATCCTG+TGG - chr2_1:9710964-9710983 Msa0193850:intron 60.0%
CGTGAGCACCACTGTGTCCA+AGG + chr2_1:9711821-9711840 None:intergenic 60.0%
!! GGCGCTGACCCTTTGAATGC+AGG + chr2_1:9713093-9713112 None:intergenic 60.0%
GCAGCTGCAGCCTCAGAGGA+GGG + chr2_1:9710412-9710431 None:intergenic 65.0%
AGCAGCTGCAGCCTCAGAGG+AGG + chr2_1:9710413-9710432 None:intergenic 65.0%
CTCAGCAGCTGCAGCCTCAG+AGG + chr2_1:9710416-9710435 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 9708452 9714552 9708452 ID=Msa0193850;Name=Msa0193850
chr2_1 mRNA 9708452 9714552 9708452 ID=Msa0193850-mRNA-1;Parent=Msa0193850;Name=Msa0193850-mRNA-1;_AED=0.08;_eAED=0.08;_QI=297|1|1|1|1|1|13|363|977
chr2_1 exon 9708452 9709402 9708452 ID=Msa0193850-mRNA-1:exon:4469;Parent=Msa0193850-mRNA-1
chr2_1 exon 9709657 9710010 9709657 ID=Msa0193850-mRNA-1:exon:4468;Parent=Msa0193850-mRNA-1
chr2_1 exon 9710116 9710315 9710116 ID=Msa0193850-mRNA-1:exon:4467;Parent=Msa0193850-mRNA-1
chr2_1 exon 9710407 9710641 9710407 ID=Msa0193850-mRNA-1:exon:4466;Parent=Msa0193850-mRNA-1
chr2_1 exon 9710767 9710979 9710767 ID=Msa0193850-mRNA-1:exon:4465;Parent=Msa0193850-mRNA-1
chr2_1 exon 9711066 9711191 9711066 ID=Msa0193850-mRNA-1:exon:4464;Parent=Msa0193850-mRNA-1
chr2_1 exon 9711423 9711560 9711423 ID=Msa0193850-mRNA-1:exon:4463;Parent=Msa0193850-mRNA-1
chr2_1 exon 9711806 9712151 9711806 ID=Msa0193850-mRNA-1:exon:4462;Parent=Msa0193850-mRNA-1
chr2_1 exon 9712321 9712596 9712321 ID=Msa0193850-mRNA-1:exon:4461;Parent=Msa0193850-mRNA-1
chr2_1 exon 9712947 9713094 9712947 ID=Msa0193850-mRNA-1:exon:4460;Parent=Msa0193850-mRNA-1
chr2_1 exon 9713182 9713233 9713182 ID=Msa0193850-mRNA-1:exon:4459;Parent=Msa0193850-mRNA-1
chr2_1 exon 9713565 9713644 9713565 ID=Msa0193850-mRNA-1:exon:4458;Parent=Msa0193850-mRNA-1
chr2_1 exon 9714078 9714552 9714078 ID=Msa0193850-mRNA-1:exon:4457;Parent=Msa0193850-mRNA-1
chr2_1 five_prime_UTR 9714256 9714552 9714256 ID=Msa0193850-mRNA-1:five_prime_utr;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9714078 9714255 9714078 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9713565 9713644 9713565 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9713182 9713233 9713182 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9712947 9713094 9712947 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9712321 9712596 9712321 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9711806 9712151 9711806 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9711423 9711560 9711423 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9711066 9711191 9711066 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9710767 9710979 9710767 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9710407 9710641 9710407 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9710116 9710315 9710116 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9709657 9710010 9709657 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 CDS 9708815 9709402 9708815 ID=Msa0193850-mRNA-1:cds;Parent=Msa0193850-mRNA-1
chr2_1 three_prime_UTR 9708452 9708814 9708452 ID=Msa0193850-mRNA-1:three_prime_utr;Parent=Msa0193850-mRNA-1
Gene Sequence

>Msa0193850

ATGATGGAATCTGGAGTTAGCTTTTGTAACTCTTGTGGTGAACAAGTTGGAGTTGATGCTAATGGAGAGGTGTTTGTGGCTTGTCATGAGTGTTATTTCCCAATTTGTAAGGCTTGTGTTGATTATGAGACCAGTGAGGGACGTAGTGTTTGCTTGAGATGTGGCAATCCCTATGCTGATAGAACAAGAGGTAAGGATGACACCAAAGTTCCTGCAAATCAATCCACAACAACGGCTGCACAGATCAGCACTTCTCAGGATGTTGGACTCCATGCTAGGCATATCAGTACAGTGTCCACAGTGGACAGTGAATTAAATGATGAGTCTGGGAATCCTATCTGGAAAAATAGAGTGGAAAGTTGGAAGGAGAAGGACAAAAAGAACAAGAAGAAAAAGGAAGCACCTAAGGCTGGAAATGAGACTCCAGTTCCACATGAACAGCAGATGGATGAAATGCAGCCCTCCTCTGAGGCTGCAGCTGCTGAGCCACTTTCAGTGATAATTCCAGTCTCAAAATCGAAACTTGGACCATACAGAACTGTTATAATCATGCGGCTCGTAATATTGGGTCTGTTTTTCCATTATAGAGTTACACATCCAGTTGATAGTGCTTTTGGTCTGTGGTTGACATCTATCATCTGTGAGATCTGGTTTGCTTTTTCCTGGGTGTTAGATCAGTTCCCTAAATGGTCTCCTATCAATAGGGTTGCTTTTACGGACAGGCTCTCGGCAAGGTTTGAAAGAGAGGGTGAACCTTGTCAGCTTGCTCCTGTGGATTTCTTTGTCAGTACAGTTGATCCGTTGAAAGAACCGCCGTTGATCACAGCTAACACAGTTCTTTCTATCCTTGCCGTGGACTATCCTGTGGAAAAAGTATCATGTTATGTTTCAGATGATGGTGCTGCAATGCTGACATTTGAATCCCTTGTGGAGACAGCTGACTTTGCAAGAAAGTGGGTTCCATTTTGCAAAAAGTTTGAGATTGAACCACGTGCACCTGAGTTTTACTTCTCTCAGAAGATTGACTATTTGAAGGACAAAGTTCAACCTTCTTTTGTGAAGGAACGTAGAGCAATGAAAAGAGAATATGAAGAGTATAAAGTCAGAGTTAATGCTTTGGTAGCTAAGGCTCAGAAAACACCAGATGAAGGGTGGACTATGCAAGATGGAACCTCTTGGCCAGGAAATAATTCACGCGACCATCCTGGCATGATTCAGGTTTTCCTTGGACACAGTGGTGCTCACGACATAGAAGGAAACGAACTTCCAAGGTTGGTCTATGTTTCCAGAGAGAAAAGGCCAGGTTACCAACACCACAAAAAGGCTGGTGCTGAAAATGCACTGGTGAGAGTGTCTGCAGTTCTCACAAACGCTCCCTACATTCTCAATCTTGACTGTGATCATTATGTTAACAATAGCAAGGCTGTTCGAGAAGCGATGTGTTTTCTGATGGATCCAGTAGTTGGTAGAGATGTTTGTTATGTGCAGTTCCCCCAAAGATTTGATGGTATTGATCGTAGTGATCGATATGCCAACCGGAACACAGTTTTCTTCGATGTTAATATGAAAGGACTTGACGGCATTCAAGGACCTGTATATGTGGGGACTGGATGTGTTTTCAATCGACAAGCGCTTTATGGATACAGTCCACCTTCTATGCCCCCATTACCAAAATCTTCATCTTGTTGTTGCTTCCGCTCAAAGAAGCCTGCCAAAGATGTCTCAGAGCTTTATAAAGATGCAAAGAGGGAAGAGCTTGATGCTGCTATTTTTAATCTCAGGGAGATTGAGAACTATGATGAGTATGAGAGGTCAATGCTTATTTCACAACTTAGCTTTGAAAAAACATTTGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAATGGTGGTGTGTCTGAATCTGCGGATCCCTCAATGCTGATCAAGGAGGCCATTCATGTAATCGGTTGTGGCTACGAAGAAAAGACAGCATGGGGAAAAGAGATTGGTTGGATATATGGTTCAGTGACTGAGGATATCTTAACGGGGTTCAAGATGCAATGTCGTGGATGGAGGTCAATTTATTGCATGCCCTTAAGGCCTGCATTCAAAGGGTCAGCGCCAATCAATCTTTCCGATCGTTTGCACCAAGTTCTTCGATGGGCTCTTGGATCAGTTGAAATTTTCCTTAGTAGACATTGTCCTCTTTGGTATGGATTTGCTGGTGGTCGTCTGAAACTGCTGCAGAGACTGGCTTATATAAACACCATCGTTTACCCTTTCACATCCCTTCCCCTCGTTGCTTATTGTACTTTGCCTGCAATTTGCCTACTCACAGGAAAATTCATCATACCAACGCTATCAAACATTGCAAGTGCACTTTTTCTTGGACTTTTCATCTCTATTATATTGACCAGTGTTCTTGAGCTGAGGTGGAGCGGTGTTACCATAGAAGATTTATGGCGTAACGAGCAGTTCTGGGTAATTGGAGGTGTTTCGGCTCATCTTTTTGCTGTCTTCCAAGGATTCCTAAAGATGTTAGCAGGTGTTGACACAAACTTCACTGTGACAGCAAAAGCTGCTGATGATGCAGAATTTGGTGAACTATATATGATCAAATGGACAACACTCTTAATTCCTCCAACAAGTCTTATCATTATTAACCTTGTTGGTGTTGTAGCTGGATTTTCTGATGCATTTAATGGTGGATATGAATCTTGGGGACCACTCATTGGAAAAGTTTTCTTCGCATTTTGGGTGATTTTTCATCTTTATCCATTCCTTAAGGGTCTTATGGGTCGCCAAAACCGTACTCCAACCATTGTTATTCTTTGGTCAGTGCTTTTGGCTTCTGTCTTCTCACTTGTTTGGGTTAAGATTAATCCATTTGTGAGCAAAGTTGATAGTTCAGCTATTTCTCAGACTTGTATTTCTATTGATTGTTAA
Protein sequence

>Msa0193850

MMESGVSFCNSCGEQVGVDANGEVFVACHECYFPICKACVDYETSEGRSVCLRCGNPYADRTRGKDDTKVPANQSTTTAAQISTSQDVGLHARHISTVSTVDSELNDESGNPIWKNRVESWKEKDKKNKKKKEAPKAGNETPVPHEQQMDEMQPSSEAAAAEPLSVIIPVSKSKLGPYRTVIIMRLVILGLFFHYRVTHPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWSPINRVAFTDRLSARFEREGEPCQLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFEIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKREYEEYKVRVNALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGHSGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYSPPSMPPLPKSSSCCCFRSKKPAKDVSELYKDAKREELDAAIFNLREIENYDEYERSMLISQLSFEKTFGLSTVFIESTLMENGGVSESADPSMLIKEAIHVIGCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNIASALFLGLFISIILTSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMIKWTTLLIPPTSLIIINLVGVVAGFSDAFNGGYESWGPLIGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFVSKVDSSAISQTCISIDC*