AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1407590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1407590 MtrunA17_Chr4g0072161 86.047 129 15 1 351 476 154 282 3.38e-73 239
Msa1407590 MtrunA17_Chr4g0072141 84.496 129 17 1 351 476 2 130 7.61e-73 235
Msa1407590 MtrunA17_Chr2g0298001 78.295 129 25 1 351 476 283 411 2.46e-64 221
Msa1407590 MtrunA17_Chr4g0072181 75.194 129 29 1 351 476 81 209 6.14e-64 213
Msa1407590 MtrunA17_Chr4g0004091 72.857 140 17 1 81 220 127 245 6.94e-59 197
Msa1407590 MtrunA17_Chr4g0004831 63.830 141 30 1 80 220 121 240 1.56e-49 172
Msa1407590 MtrunA17_Chr4g0045551 71.277 94 3 1 283 352 389 482 4.44e-33 132
Msa1407590 MtrunA17_Chr2g0282041 94.545 55 3 0 1 55 147 201 1.09e-26 114
Msa1407590 MtrunA17_Chr8g0335841 48.649 111 49 1 341 443 233 343 7.26e-26 111
Msa1407590 MtrunA17_Chr4g0047751 88.889 54 6 0 1 54 158 211 7.21e-25 108
Msa1407590 MtrunA17_Chr4g0038111 82.500 40 7 0 517 556 356 395 6.24e-15 77.8
Msa1407590 MtrunA17_Chr3g0098471 78.571 42 9 0 517 558 146 187 1.72e-14 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1407590 AT3G11710.1 76.744 129 26 2 351 476 301 428 1.02e-61 214
Msa1407590 AT4G21660.3 81.250 64 12 0 1 64 163 226 3.47e-26 113
Msa1407590 AT3G13490.1 54.945 91 41 0 351 441 273 363 2.09e-25 110
Msa1407590 AT4G21660.1 90.741 54 5 0 1 54 163 216 3.90e-25 110
Msa1407590 AT4G21660.2 67.532 77 13 1 1 77 163 227 4.27e-25 110
Msa1407590 AT3G16170.1 44.681 141 50 2 80 220 141 253 8.03e-25 109
Msa1407590 AT1G73180.2 47.959 98 27 2 283 358 386 481 9.85e-18 86.7
Msa1407590 AT1G73180.1 48.913 92 23 2 283 352 386 475 6.36e-17 84.3

Find 180 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGTCCTCACTACAAAATT+TGG 0.119205 tig0023317:+32932 None:intergenic
GCTTCCAAGTAATTTGTTTC+TGG 0.166078 tig0023317:-33679 Msa1407590:three_prime_UTR
TTCTGCATACATGTTGATTT+TGG 0.178083 tig0023317:-33157 Msa1407590:three_prime_UTR
GATGAGGATGGAAGGTTTAA+AGG 0.197412 tig0023317:-33800 Msa1407590:CDS
AGCAACTGCATTGTCTTTCT+TGG 0.198801 tig0023317:+32756 None:intergenic
TTCAATAGGGAGATGTTTAA+TGG 0.206830 tig0023317:-33030 Msa1407590:three_prime_UTR
TGAAGAAAGTTCTAAACTTT+TGG 0.209770 tig0023317:-32537 Msa1407590:three_prime_UTR
ATGGAACATGTTTATGAAAT+TGG 0.220857 tig0023317:-35249 Msa1407590:CDS
GGGTGAGGATTGAAGAATTT+GGG 0.228037 tig0023317:+39856 None:intergenic
AGAAATGGACATTCACAAAA+TGG 0.249033 tig0023317:-37486 Msa1407590:CDS
TTGTGATATGGTCTCTATTC+AGG 0.251690 tig0023317:-33434 Msa1407590:three_prime_UTR
TTCTTGCAGGGGAGCGGCTT+TGG 0.257739 tig0023317:-38471 Msa1407590:intron
GGGAAGTATAAATCAATATT+AGG 0.268562 tig0023317:-33413 Msa1407590:three_prime_UTR
CATGTTGATTCTATGGAGTT+TGG 0.274376 tig0023317:+39835 None:intergenic
AATACTTGACAACAACAATT+TGG 0.278361 tig0023317:+37001 None:intergenic
GTAGAAACTTGGGTTGGTTT+TGG 0.284210 tig0023317:+35934 None:intergenic
AACAAATGCAAATTTAATTT+CGG 0.291040 tig0023317:+32973 None:intergenic
GAGGCTGGTTCCAATTTGTT+AGG 0.292256 tig0023317:-32656 Msa1407590:three_prime_UTR
TTACAGGAATAATGCTGATT+TGG 0.294830 tig0023317:-34845 Msa1407590:intron
TCTGCACTTGTGGCACTTGC+AGG 0.312402 tig0023317:-33079 Msa1407590:three_prime_UTR
TGGGTGAGGATTGAAGAATT+TGG 0.313789 tig0023317:+39855 None:intergenic
AAACAAGGAAGATTAGAGTT+AGG 0.320485 tig0023317:-39634 Msa1407590:five_prime_UTR
TATTAGGAACAGGCAGAATA+TGG 0.324406 tig0023317:+37526 None:intergenic
GGTGATTGTCCCTAACAAAT+TGG 0.330595 tig0023317:+32646 None:intergenic
GAGTTTGCATGTTGATTCTA+TGG 0.331195 tig0023317:+39828 None:intergenic
TACAGTGTTGTTTGTGGAGT+TGG 0.334555 tig0023317:-32580 Msa1407590:three_prime_UTR
CTCTTCTCAGAGGAATTATT+AGG 0.335182 tig0023317:+37510 None:intergenic
ATGTTAAGAGCTTACGCTTT+GGG 0.338436 tig0023317:+33742 None:intergenic
GGCACTGAATATGATTTATC+AGG 0.345491 tig0023317:-39672 Msa1407590:five_prime_UTR
GAGTTTGGAGGGAGGTTCTA+AGG 0.346039 tig0023317:-32782 Msa1407590:three_prime_UTR
GATGGAAGGTTTAAAGGCTT+TGG 0.349857 tig0023317:-33794 Msa1407590:CDS
TCCATGAAGATGTACCTTGC+AGG 0.355379 tig0023317:+34776 None:intergenic
CTCAAGCAGCTGGTTGTTTG+TGG 0.355654 tig0023317:-35273 Msa1407590:CDS
GACATGCTGTTATTCGATTT+AGG 0.356277 tig0023317:-32612 Msa1407590:three_prime_UTR
CAACAACCTCTCCGCAATCT+TGG 0.359636 tig0023317:+33840 None:intergenic
CTATTATTGTGCTTGTGATA+TGG 0.360309 tig0023317:-33446 Msa1407590:three_prime_UTR
GAGTGTTGTCTTCATTCAAT+AGG 0.362606 tig0023317:-33044 Msa1407590:three_prime_UTR
TAAGACTGTAGCTGCTATTC+AGG 0.365878 tig0023317:-35851 Msa1407590:CDS
AACAAGGAAGATTAGAGTTA+GGG 0.366624 tig0023317:-39633 Msa1407590:five_prime_UTR
AAAATCAAATATCATGCAAA+TGG 0.367440 tig0023317:-34997 Msa1407590:CDS
GCCTTCTTCATTGGTCCTAC+AGG 0.371948 tig0023317:-37202 Msa1407590:intron
GAAATGGACATTCACAAAAT+GGG 0.380131 tig0023317:-37485 Msa1407590:CDS
AAGTCCTCACTACAAAATTT+GGG 0.385657 tig0023317:+32933 None:intergenic
TCCTCTGAGAAGAGTAGAAA+TGG 0.388853 tig0023317:-37501 Msa1407590:CDS
ACAGCATGTCGCCCTCTTGT+AGG 0.389300 tig0023317:+32625 None:intergenic
ATGTTGATTCTATGGAGTTT+GGG 0.389627 tig0023317:+39836 None:intergenic
CATTCATAATATTATTCATA+AGG 0.396552 tig0023317:+32904 None:intergenic
TGCAGCAGATCCTAAGTTGC+TGG 0.399151 tig0023317:-38706 Msa1407590:CDS
GCCTGCAAGGTACATCTTCA+TGG 0.400385 tig0023317:-34777 Msa1407590:CDS
CCGGCAATCTTGTTTATCAT+AGG 0.401245 tig0023317:+35378 None:intergenic
CCGAGAGAGACATGGGAAGA+AGG 0.401978 tig0023317:+39897 None:intergenic
AGACAAATTGCCTTCTTCAT+TGG 0.402869 tig0023317:-37211 Msa1407590:CDS
CAGTTGCTTGATGTGCTTAC+CGG 0.404409 tig0023317:-32741 Msa1407590:three_prime_UTR
CGAGAGAGACATGGGAAGAA+GGG 0.406672 tig0023317:+39898 None:intergenic
TCTCTATGTGATGAATAATT+CGG 0.408368 tig0023317:-37876 Msa1407590:CDS
TCCTCCTACAGTGTTGTTTG+TGG 0.411414 tig0023317:-32586 Msa1407590:three_prime_UTR
TCAGAGGAATTATTAGGAAC+AGG 0.412601 tig0023317:+37516 None:intergenic
AAATCAAATATCATGCAAAT+GGG 0.412981 tig0023317:-34996 Msa1407590:CDS
TAGACTTCACTCCACCCTTC+AGG 0.413847 tig0023317:-34951 Msa1407590:intron
ACCGTCTGCGAATTTGTTGC+TGG 0.417231 tig0023317:-37968 Msa1407590:CDS
GGAAGATTAGAGTTAGGGTT+TGG 0.421891 tig0023317:-39628 Msa1407590:five_prime_UTR
ATTGAAATCCAGGGAAATCT+TGG 0.431539 tig0023317:-38018 Msa1407590:intron
TGGACGTGCTGCTGCGCCAC+CGG 0.434564 tig0023317:+35359 None:intergenic
CCTAACTTACTTGGTGACTC+TGG 0.436811 tig0023317:+36117 None:intergenic
AATGTTAAGAGCTTACGCTT+TGG 0.439557 tig0023317:+33741 None:intergenic
TAAACTATTTGCAGGCTGAT+TGG 0.439685 tig0023317:-36143 Msa1407590:intron
TGCAGTTGGGTTGGCAGAAG+AGG 0.444560 tig0023317:+35906 None:intergenic
GGAGTGAAGTCTATTTCAAT+AGG 0.446836 tig0023317:+34961 None:intergenic
GTATTCTCTATTATTACAGT+TGG 0.447728 tig0023317:-37093 Msa1407590:CDS
TTCTCTATTATTACAGTTGG+AGG 0.450730 tig0023317:-37090 Msa1407590:CDS
TAATGACTACAACGACCTAA+TGG 0.455750 tig0023317:-35151 Msa1407590:CDS
TTCAAGCAATATCATTTCTA+CGG 0.466633 tig0023317:+32556 None:intergenic
TAATGGGTCATTGTACTTCA+AGG 0.471047 tig0023317:-36249 Msa1407590:CDS
GCTTTGGCAATCACCAATCC+TGG 0.472204 tig0023317:-38455 Msa1407590:CDS
TCAAGCAGCTGGTTGTTTGT+GGG 0.474857 tig0023317:-35272 Msa1407590:CDS
AGTGTTGTCTTCATTCAATA+GGG 0.477044 tig0023317:-33043 Msa1407590:three_prime_UTR
TGGTAAACAATTTAGAAATG+AGG 0.479474 tig0023317:-35229 Msa1407590:CDS
CCTATGATAAACAAGATTGC+CGG 0.480935 tig0023317:-35378 Msa1407590:CDS
TGCTCAGCTGCAATAATTGA+TGG 0.481250 tig0023317:-39604 Msa1407590:five_prime_UTR
AGGCTGGTTCCAATTTGTTA+GGG 0.481872 tig0023317:-32655 Msa1407590:three_prime_UTR
ATACTCGCGACTTGGCTTAG+TGG 0.485895 tig0023317:-37944 Msa1407590:CDS
TTCTGGTGTGAGGAAAAGAA+TGG 0.487616 tig0023317:+39933 None:intergenic
GAGAGAGAGGGACACGTTCA+AGG 0.489746 tig0023317:+39745 None:intergenic
GAAAATTTCTTCCAAGATTG+CGG 0.490605 tig0023317:-33851 Msa1407590:CDS
AATCTTGGTGGAGCTCGAAT+AGG 0.490823 tig0023317:-38003 Msa1407590:CDS
TGTGATATGGTCTCTATTCA+GGG 0.494498 tig0023317:-33433 Msa1407590:three_prime_UTR
TTGCTGGAATACTCGCGACT+TGG 0.497164 tig0023317:-37952 Msa1407590:CDS
GAATCCAGAAACAAATTACT+TGG 0.501359 tig0023317:+33675 None:intergenic
TTCCAAACACCTACCAGTCC+AGG 0.501998 tig0023317:+38437 None:intergenic
CCTTCTTCCCATGTCTCTCT+CGG 0.503575 tig0023317:-39897 Msa1407590:five_prime_UTR
TGAGCATTGGAGAAACGAAA+TGG 0.505403 tig0023317:-32883 Msa1407590:three_prime_UTR
ACTCCTACCACAACAACATC+AGG 0.506236 tig0023317:+38833 None:intergenic
ATGTGGTTCTTGCAGGGGAG+CGG 0.508751 tig0023317:-38477 Msa1407590:intron
AGGGACACGTTCAAGGGAAG+AGG 0.509430 tig0023317:+39752 None:intergenic
GATTCTATGGAGTTTGGGTG+AGG 0.512401 tig0023317:+39841 None:intergenic
AGCTGCTTGAGATAAAGTTC+TGG 0.514028 tig0023317:+35285 None:intergenic
TCATTGTGGTGAGCTACAAA+TGG 0.517376 tig0023317:+35339 None:intergenic
GTTCAAGGGAAGAGGATAAG+AGG 0.531277 tig0023317:+39760 None:intergenic
TGAACTCAGGAGTATGTGTA+AGG 0.534167 tig0023317:+35199 None:intergenic
AGAACTTTATCTCAAGCAGC+TGG 0.534987 tig0023317:-35283 Msa1407590:CDS
ATGTGATGAATAATTCGGTT+CGG 0.538369 tig0023317:-37871 Msa1407590:intron
AACACCTACCAGTCCAGGAT+TGG 0.539428 tig0023317:+38442 None:intergenic
ATGCTTTGAGTGTAGTGAAC+TGG 0.540321 tig0023317:-33304 Msa1407590:three_prime_UTR
TCTATCTAGCATTAGATGCC+AGG 0.544932 tig0023317:-33551 Msa1407590:three_prime_UTR
TGTGACCAATGCCTAGGTAC+AGG 0.544976 tig0023317:+38654 None:intergenic
ATAATGCTGATTTGGTTATG+TGG 0.545874 tig0023317:-34837 Msa1407590:CDS
TTCAAAATGAACCTTACCTA+AGG 0.546225 tig0023317:-37644 Msa1407590:CDS
TGTTACGCTCAGCGGTAATG+AGG 0.546564 tig0023317:+32700 None:intergenic
AGAGAGAGGGACACGTTCAA+GGG 0.553027 tig0023317:+39746 None:intergenic
TCAAACAAGAACCTCTTGCA+TGG 0.554165 tig0023317:-39694 Msa1407590:five_prime_UTR
GGCAATCACCAATCCTGGAC+TGG 0.554841 tig0023317:-38450 Msa1407590:intron
TGAGAGGGCCGAGAGAGACA+TGG 0.554946 tig0023317:+39889 None:intergenic
TTAGTGTACAAAATCAGTGC+TGG 0.555279 tig0023317:+37297 None:intergenic
ACCTGTAGGACCAATGAAGA+AGG 0.555735 tig0023317:+37201 None:intergenic
TTAGAACCTCCCTCCAAACT+CGG 0.557286 tig0023317:+32784 None:intergenic
GAGAGGGCCGAGAGAGACAT+GGG 0.558774 tig0023317:+39890 None:intergenic
TCTGCATAGCTGAGTGCAAG+TGG 0.559278 tig0023317:+37908 None:intergenic
ACAGATATTAGATTGTATGC+TGG 0.559718 tig0023317:-37253 Msa1407590:CDS
TCCACAAACAACACTGTAGG+AGG 0.562703 tig0023317:+32585 None:intergenic
TCTCTATTATTACAGTTGGA+GGG 0.566642 tig0023317:-37089 Msa1407590:CDS
GAAATCCAGGGAAATCTTGG+TGG 0.568219 tig0023317:-38015 Msa1407590:intron
AAATCACAGGTAGTGAACTC+AGG 0.569165 tig0023317:+35186 None:intergenic
TTGCTTCAGATGAGGATGGA+AGG 0.572189 tig0023317:-33808 Msa1407590:CDS
TCTATTCACGAACTCACAAA+GGG 0.572459 tig0023317:-35027 Msa1407590:CDS
CTCAAGACCTGATGTTGTTG+TGG 0.574621 tig0023317:-38840 Msa1407590:intron
TTTGGGGCTAAGAGAGTGAG+AGG 0.574621 tig0023317:+39873 None:intergenic
TGTGGTGGACGATATGCAGC+AGG 0.576118 tig0023317:+35877 None:intergenic
ATAATATTATGAATGAGCAT+TGG 0.576428 tig0023317:-32896 Msa1407590:three_prime_UTR
GTATCTTGCTTTCATGACCA+AGG 0.576767 tig0023317:-33522 Msa1407590:three_prime_UTR
TCCAGCAACAAATTCGCAGA+CGG 0.581642 tig0023317:+37967 None:intergenic
GGCACTTGCAGGAACTGCAT+TGG 0.583491 tig0023317:-33068 Msa1407590:three_prime_UTR
AAAGCATAAAATTCCTGGTG+GGG 0.584975 tig0023317:+33187 None:intergenic
CGTCTTGCTTCAGATGAGGA+TGG 0.585403 tig0023317:-33812 Msa1407590:CDS
GGTGAGGATTGAAGAATTTG+GGG 0.586947 tig0023317:+39857 None:intergenic
TTGTGATTATTCCATCATGA+GGG 0.591225 tig0023317:+39796 None:intergenic
ATATTCAGTGCCCATGCAAG+AGG 0.591294 tig0023317:+39683 None:intergenic
CTGAATATGATTTATCAGGA+TGG 0.591889 tig0023317:-39668 Msa1407590:five_prime_UTR
GTCTATTCACGAACTCACAA+AGG 0.592091 tig0023317:-35028 Msa1407590:CDS
TTCAGCTTTGTTACGCTCAG+CGG 0.592093 tig0023317:+32692 None:intergenic
GCAGCTGGTTGTTTGTGGGA+TGG 0.593960 tig0023317:-35268 Msa1407590:CDS
ATAACCGAGATTTAAAACCT+TGG 0.594681 tig0023317:+33505 None:intergenic
GGGCTTCTTAATGCAACATG+TGG 0.594840 tig0023317:-37069 Msa1407590:CDS
TTTGTGATTATTCCATCATG+AGG 0.596174 tig0023317:+39795 None:intergenic
CAAGGTGAAAATTGAGAGAG+AGG 0.597039 tig0023317:+39732 None:intergenic
TTGGAACCAGCCTCCTCCCA+AGG 0.597641 tig0023317:+32665 None:intergenic
GAGAGAGACATGGGAAGAAG+GGG 0.598055 tig0023317:+39899 None:intergenic
CTAATTTCTCAAAGCCTGCA+AGG 0.598822 tig0023317:-34790 Msa1407590:CDS
TGTAGCTGCTATTCAGGCAG+AGG 0.598925 tig0023317:-35845 Msa1407590:intron
GCTCAGCTGCAATAATTGAT+GGG 0.603788 tig0023317:-39603 Msa1407590:intron
AAATGGACATTCACAAAATG+GGG 0.610443 tig0023317:-37484 Msa1407590:CDS
GCGGCAATCGTATTCATGAC+CGG 0.611851 tig0023317:+32722 None:intergenic
CAAACAAGAACCTCTTGCAT+GGG 0.612348 tig0023317:-39693 Msa1407590:five_prime_UTR
TCCATTTCTACTCTTCTCAG+AGG 0.617031 tig0023317:+37500 None:intergenic
CCGTACCTGTACCTAGGCAT+TGG 0.618440 tig0023317:-38659 Msa1407590:CDS
AAAAGCATAAAATTCCTGGT+GGG 0.620320 tig0023317:+33186 None:intergenic
AATCAAATATCATGCAAATG+GGG 0.623882 tig0023317:-34995 Msa1407590:CDS
AAAGCAAGATACTAAATACC+TGG 0.624004 tig0023317:+33533 None:intergenic
GGCTTCTTAATGCAACATGT+GGG 0.624011 tig0023317:-37068 Msa1407590:CDS
ACTTTACGTCAAGTTCATTG+TGG 0.629848 tig0023317:+35325 None:intergenic
TACGCTCAGCGGTAATGAGG+CGG 0.632249 tig0023317:+32703 None:intergenic
GATGTTTGACAAGTTATACC+AGG 0.635363 tig0023317:-36225 Msa1407590:intron
TTCAAACCGAGTTTGGAGGG+AGG 0.637516 tig0023317:-32790 Msa1407590:three_prime_UTR
GCTACAGTCTTAGCATGTGG+TGG 0.640695 tig0023317:+35862 None:intergenic
TGATAGCAATTATTATCCTG+AGG 0.652576 tig0023317:-34741 Msa1407590:intron
AACTCCACAAACAACACTGT+AGG 0.655204 tig0023317:+32582 None:intergenic
CTCGCGACTTGGCTTAGTGG+AGG 0.656754 tig0023317:-37941 Msa1407590:CDS
TTGAATGCACTGCACCTGAA+GGG 0.657190 tig0023317:+34937 None:intergenic
CCAATGCCTAGGTACAGGTA+CGG 0.657807 tig0023317:+38659 None:intergenic
TAGGGACAATCACCTACAAG+AGG 0.660602 tig0023317:-32637 Msa1407590:three_prime_UTR
GTAACACCGTACCTGTACCT+AGG 0.660864 tig0023317:-38665 Msa1407590:CDS
AAGGTGAAAATTGAGAGAGA+GGG 0.672652 tig0023317:+39733 None:intergenic
GCAGCTACAGTCTTAGCATG+TGG 0.674519 tig0023317:+35859 None:intergenic
AATGCACTGCACCTGAAGGG+TGG 0.675869 tig0023317:+34940 None:intergenic
ATGATAAACAAGATTGCCGG+TGG 0.677791 tig0023317:-35375 Msa1407590:CDS
ATATTGAGTACTGAAGATCA+TGG 0.680453 tig0023317:-37594 Msa1407590:CDS
TGTACGTCTTGCTTCAGATG+AGG 0.681852 tig0023317:-33816 Msa1407590:CDS
TGTTGAGTTTGCAACTGCAG+TGG 0.689687 tig0023317:-33768 Msa1407590:CDS
AGGGACAATCACCTACAAGA+GGG 0.691250 tig0023317:-32636 Msa1407590:three_prime_UTR
TTTCTTCCAAGATTGCGGAG+AGG 0.695206 tig0023317:-33846 Msa1407590:CDS
TTGGGGCTAAGAGAGTGAGA+GGG 0.745435 tig0023317:+39874 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTAATTATGTATTTT+TGG - tig0023317:32991-33010 Msa1407590:three_prime_UTR 10.0%
!! ATTTGAAAATTTCATATAAA+AGG + tig0023317:34708-34727 None:intergenic 10.0%
!!! TTATAAAATCTATTGTATTT+TGG - tig0023317:37539-37558 Msa1407590:CDS 10.0%
!! AAACATACTTACAAAAAAAA+AGG + tig0023317:33095-33114 None:intergenic 15.0%
!!! TTTTTTTGTAAGTATGTTTT+TGG - tig0023317:33096-33115 Msa1407590:three_prime_UTR 15.0%
!!! ATTATCTTTGTTATATTGAT+TGG - tig0023317:34045-34064 Msa1407590:intron 15.0%
!!! TTATCTTTGTTATATTGATT+GGG - tig0023317:34046-34065 Msa1407590:intron 15.0%
!!! TCATTGATTAATGTTTAATT+TGG - tig0023317:35272-35291 Msa1407590:CDS 15.0%
!! TATAAAATATGGTCAAATAA+TGG - tig0023317:35695-35714 Msa1407590:intron 15.0%
!! AATAAAATCATTTCTTACAT+AGG - tig0023317:36911-36930 Msa1407590:intron 15.0%
!! CTTAATAAGATAAAATCATA+TGG + tig0023317:37383-37402 None:intergenic 15.0%
!!! CATATGATTTTATCTTATTA+AGG - tig0023317:37381-37400 Msa1407590:intron 15.0%
!!! ATTTGTATTTTTATTGTTAC+AGG - tig0023317:37570-37589 Msa1407590:CDS 15.0%
!!! AATTTTAATCAACTTCAATA+GGG + tig0023317:37891-37910 None:intergenic 15.0%
!! ATAAACTCTATTATTAATGT+TGG - tig0023317:37935-37954 Msa1407590:CDS 15.0%
!!! AAAAATAATAAAGCATCAAA+TGG + tig0023317:39098-39117 None:intergenic 15.0%
!!! AACAAATGCAAATTTAATTT+CGG + tig0023317:39461-39480 None:intergenic 15.0%
!! CATTCATAATATTATTCATA+AGG + tig0023317:39530-39549 None:intergenic 15.0%
!! CTCATTCTTATTCTTAATTT+GGG + tig0023317:33062-33081 None:intergenic 20.0%
!! ACTCATTCTTATTCTTAATT+TGG + tig0023317:33063-33082 None:intergenic 20.0%
!! TAACTCAAACAAATAATCAA+AGG + tig0023317:33385-33404 None:intergenic 20.0%
!!! AGAATTAGTTTCAAATTGTT+GGG - tig0023317:33633-33652 Msa1407590:three_prime_UTR 20.0%
!! ATCTTATATATGTATGTATG+TGG - tig0023317:33937-33956 Msa1407590:intron 20.0%
!!! ATTTGTTTGGTGTTTTTTTT+TGG - tig0023317:34122-34141 Msa1407590:intron 20.0%
!! ATCAATCTGCTAAAAATTTA+AGG - tig0023317:34286-34305 Msa1407590:intron 20.0%
!! TTGAATACTTAGTATATTGT+TGG - tig0023317:34313-34332 Msa1407590:intron 20.0%
!! TGAATACTTAGTATATTGTT+GGG - tig0023317:34314-34333 Msa1407590:intron 20.0%
!! TCGTTTAGTCAAATTATTTA+TGG - tig0023317:34389-34408 Msa1407590:intron 20.0%
!!! ATATGAAATTTTCAAATAGC+TGG - tig0023317:34711-34730 Msa1407590:intron 20.0%
!!! ATCATATATACTTTTCACAA+AGG + tig0023317:34757-34776 None:intergenic 20.0%
!!! ACATTTTCAGCTTTTAAAAA+TGG - tig0023317:35026-35045 Msa1407590:CDS 20.0%
!! ATGCTATTCAGTATAAAATA+TGG - tig0023317:35684-35703 Msa1407590:intron 20.0%
!! ATAATGGCTATAACTTAAAT+AGG - tig0023317:35711-35730 Msa1407590:intron 20.0%
!! TAATGGCTATAACTTAAATA+GGG - tig0023317:35712-35731 Msa1407590:intron 20.0%
!! AGAAATGAGCAAATAAAAAA+AGG + tig0023317:36032-36051 None:intergenic 20.0%
!!! ATCAAGATTTTTCACTATAA+TGG - tig0023317:36165-36184 Msa1407590:intron 20.0%
!!! TCAAGATTTTTCACTATAAT+GGG - tig0023317:36166-36185 Msa1407590:intron 20.0%
!! AAGAAATAGTAGAATAAACA+TGG + tig0023317:36411-36430 None:intergenic 20.0%
!! AAAATCAAATATCATGCAAA+TGG - tig0023317:37434-37453 Msa1407590:intron 20.0%
!! AAATCAAATATCATGCAAAT+GGG - tig0023317:37435-37454 Msa1407590:intron 20.0%
!!! GAATTTTAATCAACTTCAAT+AGG + tig0023317:37892-37911 None:intergenic 20.0%
!! TGAAAAAATTCAGTTAGATA+AGG + tig0023317:38558-38577 None:intergenic 20.0%
!!! TTAACATTTTTTCAACTTTG+TGG - tig0023317:38705-38724 Msa1407590:CDS 20.0%
!!! AGGTTATATGATCTTTTAAT+AGG - tig0023317:39038-39057 Msa1407590:intron 20.0%
!!! GGTTATATGATCTTTTAATA+GGG - tig0023317:39039-39058 Msa1407590:intron 20.0%
!!! GTTATATGATCTTTTAATAG+GGG - tig0023317:39040-39059 Msa1407590:intron 20.0%
!! ATAATATTATGAATGAGCAT+TGG - tig0023317:39535-39554 Msa1407590:intron 20.0%
!!! AAAATTTTTTTTCTGGTGTG+AGG + tig0023317:32511-32530 None:intergenic 25.0%
!!! AAGGGGAAAAATTTTTTTTC+TGG + tig0023317:32518-32537 None:intergenic 25.0%
! TGAATAAAAATGAAAACCCA+AGG + tig0023317:32720-32739 None:intergenic 25.0%
!!! AAGTTGTTTAAGTTGTTGTA+AGG - tig0023317:32942-32961 Msa1407590:three_prime_UTR 25.0%
! CAATTATACAAACATCTTGT+GGG + tig0023317:33200-33219 None:intergenic 25.0%
! TTGTATAATTGCCTGAATTA+AGG - tig0023317:33209-33228 Msa1407590:three_prime_UTR 25.0%
!! TTAACTAATCTTTTGAGCTT+TGG - tig0023317:33311-33330 Msa1407590:three_prime_UTR 25.0%
! AATAGTTATTTACGATCACA+AGG + tig0023317:33411-33430 None:intergenic 25.0%
! CAATGAAATCAGGAAAATAA+TGG + tig0023317:33487-33506 None:intergenic 25.0%
! AAAAAAGATGCAATGAAATC+AGG + tig0023317:33497-33516 None:intergenic 25.0%
!! CAGAATTAGTTTCAAATTGT+TGG - tig0023317:33632-33651 Msa1407590:three_prime_UTR 25.0%
! ATGAAACATCATTTGCATAA+CGG + tig0023317:33677-33696 None:intergenic 25.0%
!! TGTTTCATAATTTCGTTTTC+AGG - tig0023317:33689-33708 Msa1407590:three_prime_UTR 25.0%
!!! ATAATTTCGTTTTCAGGTTT+GGG - tig0023317:33695-33714 Msa1407590:three_prime_UTR 25.0%
!! ACAAAAGAGAAAATTTTTGC+AGG - tig0023317:33797-33816 Msa1407590:CDS 25.0%
! CCTATAATAACTATCAAGTT+AGG + tig0023317:33834-33853 None:intergenic 25.0%
!! CCTAACTTGATAGTTATTAT+AGG - tig0023317:33831-33850 Msa1407590:CDS 25.0%
! AATAAAAGAGAAACAACTCA+AGG + tig0023317:34028-34047 None:intergenic 25.0%
!!! TAATGCACAAGATATTTTTG+TGG - tig0023317:34157-34176 Msa1407590:intron 25.0%
!! TAGCAATTTTTCTCTGAATT+TGG - tig0023317:34194-34213 Msa1407590:intron 25.0%
! TCTCTATGTGATGAATAATT+CGG - tig0023317:34555-34574 Msa1407590:intron 25.0%
! ACGTTAAACAGATAAAAGAA+AGG + tig0023317:34624-34643 None:intergenic 25.0%
!! ATTTTCCATTGACATTATCT+TGG - tig0023317:34680-34699 Msa1407590:intron 25.0%
!!! CATTTGTTTTTCATATCCTT+TGG - tig0023317:35098-35117 Msa1407590:intron 25.0%
!! TTTTTCATATCCTTTGGATT+AGG - tig0023317:35104-35123 Msa1407590:intron 25.0%
!! GAACAATTTTATATACCTGT+AGG + tig0023317:35247-35266 None:intergenic 25.0%
! GTATTCTCTATTATTACAGT+TGG - tig0023317:35338-35357 Msa1407590:CDS 25.0%
! AATACTTGACAACAACAATT+TGG + tig0023317:35433-35452 None:intergenic 25.0%
! AAATAATTCAAGAACCAAAC+AGG + tig0023317:35800-35819 None:intergenic 25.0%
! TAAACCAAATATAGTAGTGA+TGG + tig0023317:35861-35880 None:intergenic 25.0%
!! TAAAAAAAGGAATGTTTTCG+TGG + tig0023317:36019-36038 None:intergenic 25.0%
! ATGAATCAGAAAACATGTTA+TGG - tig0023317:36060-36079 Msa1407590:intron 25.0%
! TGAATCAGAAAACATGTTAT+GGG - tig0023317:36061-36080 Msa1407590:intron 25.0%
! AATGAAAAATGCTTTCTTAG+TGG + tig0023317:36119-36138 None:intergenic 25.0%
!! TTTTGTTCTTTTTCCATTGA+AGG - tig0023317:36142-36161 Msa1407590:intron 25.0%
! AGAAACAATTAACAGATCAT+TGG + tig0023317:36627-36646 None:intergenic 25.0%
!!! GATTTTATTTCTCGATTATG+TGG + tig0023317:36900-36919 None:intergenic 25.0%
! AACAAACCTCCATAAAATTA+AGG + tig0023317:36948-36967 None:intergenic 25.0%
! ATGGAACATGTTTATGAAAT+TGG - tig0023317:37182-37201 Msa1407590:intron 25.0%
! TGGTAAACAATTTAGAAATG+AGG - tig0023317:37202-37221 Msa1407590:intron 25.0%
! ATAAGCCATATAAAAATCAC+AGG + tig0023317:37261-37280 None:intergenic 25.0%
! AATCAAATATCATGCAAATG+GGG - tig0023317:37436-37455 Msa1407590:intron 25.0%
!!! GTGGTTTTATTATTCTTCTA+TGG - tig0023317:37613-37632 Msa1407590:CDS 25.0%
!!! TCTATTATTAATGTTGGTTC+TGG - tig0023317:37941-37960 Msa1407590:CDS 25.0%
!! ACAATTCTGAATTTTTCCAT+GGG + tig0023317:38420-38439 None:intergenic 25.0%
!! AACAATTCTGAATTTTTCCA+TGG + tig0023317:38421-38440 None:intergenic 25.0%
! AGAATTGTTAGAAATGATTC+AGG - tig0023317:38432-38451 Msa1407590:intron 25.0%
! AAGTAGAAAATTAGAGAGTA+AGG - tig0023317:38528-38547 Msa1407590:intron 25.0%
! AGTAGAAAATTAGAGAGTAA+GGG - tig0023317:38529-38548 Msa1407590:intron 25.0%
!! GGGAAGTATAAATCAATATT+AGG - tig0023317:39018-39037 Msa1407590:intron 25.0%
!! AACAAAAAGCATAAAATTCC+TGG + tig0023317:39252-39271 None:intergenic 25.0%
!!! TTTGGTATTTTGATAAGATC+TGG - tig0023317:39292-39311 Msa1407590:intron 25.0%
!! AAGTTGAAGAACAAAGTTTT+TGG + tig0023317:39328-39347 None:intergenic 25.0%
! TTCAAGCAATATCATTTCTA+CGG + tig0023317:39878-39897 None:intergenic 25.0%
!!! TGAAGAAAGTTCTAAACTTT+TGG - tig0023317:39894-39913 Msa1407590:five_prime_UTR 25.0%
!! ATGTTGATTCTATGGAGTTT+GGG + tig0023317:32598-32617 None:intergenic 30.0%
TTGTGATTATTCCATCATGA+GGG + tig0023317:32638-32657 None:intergenic 30.0%
TTTGTGATTATTCCATCATG+AGG + tig0023317:32639-32658 None:intergenic 30.0%
CTGAATATGATTTATCAGGA+TGG - tig0023317:32763-32782 Msa1407590:three_prime_UTR 30.0%
AAACAAGGAAGATTAGAGTT+AGG - tig0023317:32797-32816 Msa1407590:three_prime_UTR 30.0%
AACAAGGAAGATTAGAGTTA+GGG - tig0023317:32798-32817 Msa1407590:three_prime_UTR 30.0%
GCAATTATACAAACATCTTG+TGG + tig0023317:33201-33220 None:intergenic 30.0%
TAACACACTCACAATATGAA+AGG + tig0023317:33273-33292 None:intergenic 30.0%
ATTCACATATTCCTTAAGAG+AGG + tig0023317:33346-33365 None:intergenic 30.0%
!! CATATTCTGAAGTTTACATC+AGG - tig0023317:33452-33471 Msa1407590:three_prime_UTR 30.0%
!!! TCATTGCATCTTTTTTTTGC+AGG - tig0023317:33501-33520 Msa1407590:three_prime_UTR 30.0%
!!! CATAATTTCGTTTTCAGGTT+TGG - tig0023317:33694-33713 Msa1407590:three_prime_UTR 30.0%
TGAAAACGATGAAGTCAATA+AGG - tig0023317:33911-33930 Msa1407590:intron 30.0%
ATTGAGGAGAATAAAAGTTG+AGG - tig0023317:34250-34269 Msa1407590:intron 30.0%
! TATTTATGGCATTGAAATCC+AGG - tig0023317:34403-34422 Msa1407590:intron 30.0%
! ATTTATGGCATTGAAATCCA+GGG - tig0023317:34404-34423 Msa1407590:intron 30.0%
ATGTGATGAATAATTCGGTT+CGG - tig0023317:34560-34579 Msa1407590:intron 30.0%
CTTGTGAACATTAAGAATTC+AGG - tig0023317:34648-34667 Msa1407590:intron 30.0%
TTCAAAATGAACCTTACCTA+AGG - tig0023317:34787-34806 Msa1407590:CDS 30.0%
! ACATTTTTCTTCCTTAGGTA+AGG + tig0023317:34801-34820 None:intergenic 30.0%
TACCTAAGGAAGAAAAATGT+TGG - tig0023317:34801-34820 Msa1407590:CDS 30.0%
!! ATATTGAGTACTGAAGATCA+TGG - tig0023317:34837-34856 Msa1407590:CDS 30.0%
!! AAACTGAGAAGAGGTTTTAT+TGG + tig0023317:34883-34902 None:intergenic 30.0%
AATATGGAAAAACTGAGAAG+AGG + tig0023317:34892-34911 None:intergenic 30.0%
AGAAATGGACATTCACAAAA+TGG - tig0023317:34945-34964 Msa1407590:intron 30.0%
GAAATGGACATTCACAAAAT+GGG - tig0023317:34946-34965 Msa1407590:intron 30.0%
AAATGGACATTCACAAAATG+GGG - tig0023317:34947-34966 Msa1407590:intron 30.0%
! TTGATCTTTCGACATTTTTC+AGG + tig0023317:34995-35014 None:intergenic 30.0%
ACAGATATTAGATTGTATGC+TGG - tig0023317:35178-35197 Msa1407590:CDS 30.0%
TTCTCTATTATTACAGTTGG+AGG - tig0023317:35341-35360 Msa1407590:CDS 30.0%
TCTCTATTATTACAGTTGGA+GGG - tig0023317:35342-35361 Msa1407590:CDS 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG - tig0023317:35440-35459 Msa1407590:intron 30.0%
! TTTCAAGTCTGGTAATAGTA+TGG - tig0023317:35750-35769 Msa1407590:intron 30.0%
!!! GCTAGATTAGTTTTTCATGT+TGG - tig0023317:35772-35791 Msa1407590:intron 30.0%
CTTTCCATCACTACTATATT+TGG - tig0023317:35854-35873 Msa1407590:CDS 30.0%
GAATGCATTTGTAGTTTCTT+CGG - tig0023317:35919-35938 Msa1407590:CDS 30.0%
TTCTTCGGAAAAACTAACAA+AGG - tig0023317:35934-35953 Msa1407590:CDS 30.0%
GAAAAATCTTGATCCTTCAA+TGG + tig0023317:36158-36177 None:intergenic 30.0%
ATTGTGTGTAAACTATTTGC+AGG - tig0023317:36280-36299 Msa1407590:intron 30.0%
CTTGAAGATTAAAAACCATC+AGG - tig0023317:36378-36397 Msa1407590:intron 30.0%
CCATAAAATTAAGGTCATCA+AGG + tig0023317:36939-36958 None:intergenic 30.0%
!! CCTTGATGACCTTAATTTTA+TGG - tig0023317:36936-36955 Msa1407590:intron 30.0%
! TGATGACCTTAATTTTATGG+AGG - tig0023317:36939-36958 Msa1407590:intron 30.0%
TGGAAGAAATTATAAGCAAC+TGG + tig0023317:36992-37011 None:intergenic 30.0%
CTGAAAGTAGTGAAAAGAAT+AGG + tig0023317:37024-37043 None:intergenic 30.0%
! CTATTCTTTTCACTACTTTC+AGG - tig0023317:37022-37041 Msa1407590:CDS 30.0%
! CACTACCTGTGATTTTTATA+TGG - tig0023317:37253-37272 Msa1407590:CDS 30.0%
ATAACACAGAAAATGTTGAG+TGG - tig0023317:37305-37324 Msa1407590:CDS 30.0%
TTGAGTGGTGAGAATTATTA+AGG - tig0023317:37320-37339 Msa1407590:intron 30.0%
! TTACAGGAATAATGCTGATT+TGG - tig0023317:37586-37605 Msa1407590:CDS 30.0%
!! ATAATGCTGATTTGGTTATG+TGG - tig0023317:37594-37613 Msa1407590:CDS 30.0%
TGATAGCAATTATTATCCTG+AGG - tig0023317:37690-37709 Msa1407590:intron 30.0%
CTTAATGACACATTAATAGC+AGG + tig0023317:37764-37783 None:intergenic 30.0%
AAAACCTGAAACATGAATGT+TGG + tig0023317:38129-38148 None:intergenic 30.0%
!!! AACATTCATGTTTCAGGTTT+TGG - tig0023317:38128-38147 Msa1407590:intron 30.0%
!!! ACATTCATGTTTCAGGTTTT+GGG - tig0023317:38129-38148 Msa1407590:intron 30.0%
AGTTGCTACTGAAAAAATCA+TGG + tig0023317:38222-38241 None:intergenic 30.0%
!!! GATTTTTTCAGTAGCAACTT+AGG - tig0023317:38223-38242 Msa1407590:intron 30.0%
TAGGTCATATTCATCAGAAA+AGG + tig0023317:38258-38277 None:intergenic 30.0%
!! CAATAACTTGCCAACATTTT+TGG - tig0023317:38342-38361 Msa1407590:intron 30.0%
GAAAATTTCTTCCAAGATTG+CGG - tig0023317:38580-38599 Msa1407590:intron 30.0%
GAATCCAGAAACAAATTACT+TGG + tig0023317:38759-38778 None:intergenic 30.0%
AAAGCAAGATACTAAATACC+TGG + tig0023317:38901-38920 None:intergenic 30.0%
!!! ATGACCAAGGTTTTAAATCT+CGG - tig0023317:38922-38941 Msa1407590:intron 30.0%
! ATAACCGAGATTTAAAACCT+TGG + tig0023317:38929-38948 None:intergenic 30.0%
CTATTATTGTGCTTGTGATA+TGG - tig0023317:38985-39004 Msa1407590:intron 30.0%
! AAAAGCATAAAATTCCTGGT+GGG + tig0023317:39248-39267 None:intergenic 30.0%
! AAAAAGCATAAAATTCCTGG+TGG + tig0023317:39249-39268 None:intergenic 30.0%
!!! TTCTGCATACATGTTGATTT+TGG - tig0023317:39274-39293 Msa1407590:intron 30.0%
AGTGTTGTCTTCATTCAATA+GGG - tig0023317:39388-39407 Msa1407590:intron 30.0%
TTCAATAGGGAGATGTTTAA+TGG - tig0023317:39401-39420 Msa1407590:intron 30.0%
AAGTCCTCACTACAAAATTT+GGG + tig0023317:39501-39520 None:intergenic 30.0%
TAAGTCCTCACTACAAAATT+TGG + tig0023317:39502-39521 None:intergenic 30.0%
TAACAAAGCTGAAAAATCCT+TGG - tig0023317:39749-39768 Msa1407590:five_prime_UTR 30.0%
AACAAAGCTGAAAAATCCTT+GGG - tig0023317:39750-39769 Msa1407590:five_prime_UTR 30.0%
!! AACTTTTGGAAATTGTATGC+TGG - tig0023317:39908-39927 Msa1407590:five_prime_UTR 30.0%
!! CATGTTGATTCTATGGAGTT+TGG + tig0023317:32599-32618 None:intergenic 35.0%
!! GAGTTTGCATGTTGATTCTA+TGG + tig0023317:32606-32625 None:intergenic 35.0%
!! TCATTTTTGAACCCTCATGA+TGG - tig0023317:32624-32643 Msa1407590:three_prime_UTR 35.0%
AAGGTGAAAATTGAGAGAGA+GGG + tig0023317:32701-32720 None:intergenic 35.0%
! TCTCTCTCAATTTTCACCTT+GGG - tig0023317:32701-32720 Msa1407590:three_prime_UTR 35.0%
! GGCACTGAATATGATTTATC+AGG - tig0023317:32759-32778 Msa1407590:three_prime_UTR 35.0%
! ATGGTCTGAAGCAAAAAACA+AGG - tig0023317:32782-32801 Msa1407590:three_prime_UTR 35.0%
! AGTAGTGTTGTTAGAGTTTG+AGG - tig0023317:33028-33047 Msa1407590:three_prime_UTR 35.0%
AATTGCCTGAATTAAGGTGT+AGG - tig0023317:33215-33234 Msa1407590:three_prime_UTR 35.0%
TGTGAGTGTGTTATGATTCA+AGG - tig0023317:33280-33299 Msa1407590:three_prime_UTR 35.0%
GGAATGTAAATCCTCTCTTA+AGG - tig0023317:33332-33351 Msa1407590:three_prime_UTR 35.0%
TTCAAAAACACCAGCAACTT+AGG + tig0023317:33738-33757 None:intergenic 35.0%
AATGATGTAAGCATGTCTGA+TGG - tig0023317:33856-33875 Msa1407590:intron 35.0%
! TGTTGTGCACAAGATTTGTT+TGG - tig0023317:34109-34128 Msa1407590:intron 35.0%
!!! TGGTGTTTTTTTTTGGAGTG+AGG - tig0023317:34129-34148 Msa1407590:intron 35.0%
!! ACAAGATATTTTTGTGGCCT+TGG - tig0023317:34163-34182 Msa1407590:intron 35.0%
AGTCGAAACACAATGTATTG+AGG - tig0023317:34234-34253 Msa1407590:intron 35.0%
ATTGAAATCCAGGGAAATCT+TGG - tig0023317:34413-34432 Msa1407590:intron 35.0%
AGGTACCAAGATAATGTCAA+TGG + tig0023317:34688-34707 None:intergenic 35.0%
TATTAGGAACAGGCAGAATA+TGG + tig0023317:34908-34927 None:intergenic 35.0%
TCAGAGGAATTATTAGGAAC+AGG + tig0023317:34918-34937 None:intergenic 35.0%
CTCTTCTCAGAGGAATTATT+AGG + tig0023317:34924-34943 None:intergenic 35.0%
! ATCTTCGTATCAGTTTTCTG+AGG - tig0023317:35061-35080 Msa1407590:intron 35.0%
TTAGTGTACAAAATCAGTGC+TGG + tig0023317:35137-35156 None:intergenic 35.0%
!!! GCACTGATTTTGTACACTAA+CGG - tig0023317:35137-35156 Msa1407590:CDS 35.0%
!!! CACTGATTTTGTACACTAAC+GGG - tig0023317:35138-35157 Msa1407590:CDS 35.0%
AGACAAATTGCCTTCTTCAT+TGG - tig0023317:35220-35239 Msa1407590:CDS 35.0%
AAGAAGAAGGTTTGAAAGGA+TGG + tig0023317:35468-35487 None:intergenic 35.0%
TTATACTGAATAGCATGTCG+CGG + tig0023317:35680-35699 None:intergenic 35.0%
! TTTTCATGTTGGTACCTGTT+TGG - tig0023317:35783-35802 Msa1407590:intron 35.0%
TTCAATCATCACACTTGTGA+TGG - tig0023317:35970-35989 Msa1407590:intron 35.0%
! ATGGGAGAATATTTTGCTGA+TGG - tig0023317:36079-36098 Msa1407590:intron 35.0%
! TAATGGGTCATTGTACTTCA+AGG - tig0023317:36182-36201 Msa1407590:intron 35.0%
GATGTTTGACAAGTTATACC+AGG - tig0023317:36206-36225 Msa1407590:intron 35.0%
TAAACTATTTGCAGGCTGAT+TGG - tig0023317:36288-36307 Msa1407590:intron 35.0%
AAACATGGTAAAGAACCTGA+TGG + tig0023317:36396-36415 None:intergenic 35.0%
! AGAGGCTTTTGTAGAAACTT+GGG + tig0023317:36510-36529 None:intergenic 35.0%
! AAGAGGCTTTTGTAGAAACT+TGG + tig0023317:36511-36530 None:intergenic 35.0%
ACTTCAGCAATAAGTTTGCA+TGG - tig0023317:36667-36686 Msa1407590:intron 35.0%
!! ATAATGGATGGTGACACAAA+AGG + tig0023317:36718-36737 None:intergenic 35.0%
! GCGAAAGTCATAATAATGGA+TGG + tig0023317:36730-36749 None:intergenic 35.0%
CACAGCGAAAGTCATAATAA+TGG + tig0023317:36734-36753 None:intergenic 35.0%
TCTGATATGAGATGTGAAGT+TGG - tig0023317:36783-36802 Msa1407590:intron 35.0%
CTGATATGAGATGTGAAGTT+GGG - tig0023317:36784-36803 Msa1407590:intron 35.0%
TGATATGAGATGTGAAGTTG+GGG - tig0023317:36785-36804 Msa1407590:intron 35.0%
AGACCACTGTTAATAGATGA+GGG + tig0023317:36865-36884 None:intergenic 35.0%
AAAAGAATAGGTACGAGGAA+TGG + tig0023317:37012-37031 None:intergenic 35.0%
TAGTGAAAAGAATAGGTACG+AGG + tig0023317:37017-37036 None:intergenic 35.0%
CCTATGATAAACAAGATTGC+CGG - tig0023317:37053-37072 Msa1407590:CDS 35.0%
ACTTTACGTCAAGTTCATTG+TGG + tig0023317:37109-37128 None:intergenic 35.0%
TAATGACTACAACGACCTAA+TGG - tig0023317:37280-37299 Msa1407590:CDS 35.0%
! TTTTCTGTGTTATCGCCATT+AGG + tig0023317:37298-37317 None:intergenic 35.0%
TCTATTCACGAACTCACAAA+GGG - tig0023317:37404-37423 Msa1407590:intron 35.0%
GGAGTGAAGTCTATTTCAAT+AGG + tig0023317:37473-37492 None:intergenic 35.0%
!! TGATCAACAAAAAGTACCTC+AGG + tig0023317:37709-37728 None:intergenic 35.0%
!! CTTTAAGATGTTGTGGAAAG+CGG - tig0023317:37964-37983 Msa1407590:CDS 35.0%
ATCTCCAACATTCATGTTTC+AGG - tig0023317:38122-38141 Msa1407590:intron 35.0%
! TTATCTCAATGTGTTGCTAG+AGG - tig0023317:38158-38177 Msa1407590:intron 35.0%
GATGAATATGACCTACATTC+AGG - tig0023317:38263-38282 Msa1407590:intron 35.0%
TCACAAATAGACCTGAATGT+AGG + tig0023317:38277-38296 None:intergenic 35.0%
!!! AACTTGCCAACATTTTTGGT+TGG - tig0023317:38346-38365 Msa1407590:intron 35.0%
CAATGACCAACCAAAAATGT+TGG + tig0023317:38355-38374 None:intergenic 35.0%
ATGTTAAGAGCTTACGCTTT+GGG + tig0023317:38692-38711 None:intergenic 35.0%
AATGTTAAGAGCTTACGCTT+TGG + tig0023317:38693-38712 None:intergenic 35.0%
!! GCTTCCAAGTAATTTGTTTC+TGG - tig0023317:38752-38771 Msa1407590:intron 35.0%
TTGTGATATGGTCTCTATTC+AGG - tig0023317:38997-39016 Msa1407590:intron 35.0%
TGTGATATGGTCTCTATTCA+GGG - tig0023317:38998-39017 Msa1407590:intron 35.0%
AAAGCATAAAATTCCTGGTG+GGG + tig0023317:39247-39266 None:intergenic 35.0%
! CAACTTTTTATCTGCACTTG+TGG - tig0023317:39342-39361 Msa1407590:intron 35.0%
! GAGTGTTGTCTTCATTCAAT+AGG - tig0023317:39387-39406 Msa1407590:intron 35.0%
! TAGTCCCAAATTTTGTAGTG+AGG - tig0023317:39494-39513 Msa1407590:intron 35.0%
!! AGCATTTTTCAAACCGAGTT+TGG - tig0023317:39634-39653 Msa1407590:five_prime_UTR 35.0%
!! ATTTTTCAAACCGAGTTTGG+AGG - tig0023317:39637-39656 Msa1407590:five_prime_UTR 35.0%
!! TTTTTCAAACCGAGTTTGGA+GGG - tig0023317:39638-39657 Msa1407590:five_prime_UTR 35.0%
GACATGCTGTTATTCGATTT+AGG - tig0023317:39819-39838 Msa1407590:five_prime_UTR 35.0%
GGTGAGGATTGAAGAATTTG+GGG + tig0023317:32577-32596 None:intergenic 40.0%
GGGTGAGGATTGAAGAATTT+GGG + tig0023317:32578-32597 None:intergenic 40.0%
TGGGTGAGGATTGAAGAATT+TGG + tig0023317:32579-32598 None:intergenic 40.0%
CAAGGTGAAAATTGAGAGAG+AGG + tig0023317:32702-32721 None:intergenic 40.0%
! CTCTCTCTCAATTTTCACCT+TGG - tig0023317:32700-32719 Msa1407590:three_prime_UTR 40.0%
TCAAACAAGAACCTCTTGCA+TGG - tig0023317:32737-32756 Msa1407590:three_prime_UTR 40.0%
CAAACAAGAACCTCTTGCAT+GGG - tig0023317:32738-32757 Msa1407590:three_prime_UTR 40.0%
GGAAGATTAGAGTTAGGGTT+TGG - tig0023317:32803-32822 Msa1407590:three_prime_UTR 40.0%
TGCTCAGCTGCAATAATTGA+TGG - tig0023317:32827-32846 Msa1407590:three_prime_UTR 40.0%
GCTCAGCTGCAATAATTGAT+GGG - tig0023317:32828-32847 Msa1407590:three_prime_UTR 40.0%
!!! GTTCTGTTTTTGCTGATTGC+TGG - tig0023317:32871-32890 Msa1407590:three_prime_UTR 40.0%
ACACTCCTACACCTTAATTC+AGG + tig0023317:33223-33242 None:intergenic 40.0%
! TTGGGTATCCGCTTCTTTTA+AGG - tig0023317:33651-33670 Msa1407590:three_prime_UTR 40.0%
CATAACGGCCTTAAAAGAAG+CGG + tig0023317:33662-33681 None:intergenic 40.0%
ATTAGTACATCACTCACGCA+AGG + tig0023317:33887-33906 None:intergenic 40.0%
TGCGTGAGTGATGTACTAAT+AGG - tig0023317:33887-33906 Msa1407590:intron 40.0%
GCGTGAGTGATGTACTAATA+GGG - tig0023317:33888-33907 Msa1407590:intron 40.0%
TGTATGTATGTGGTTCTTGC+AGG - tig0023317:33947-33966 Msa1407590:intron 40.0%
GTATGTATGTGGTTCTTGCA+GGG - tig0023317:33948-33967 Msa1407590:intron 40.0%
TATGTATGTGGTTCTTGCAG+GGG - tig0023317:33949-33968 Msa1407590:intron 40.0%
ACTGGTAGGTGTTTGGAAAT+GGG - tig0023317:33999-34018 Msa1407590:intron 40.0%
AAATTGCTATATCTGCGCCA+AGG + tig0023317:34183-34202 None:intergenic 40.0%
! GAATTTGGTTCATTTGACCG+AGG - tig0023317:34209-34228 Msa1407590:intron 40.0%
! CGCCAACATTTTTCTTCCTT+AGG + tig0023317:34806-34825 None:intergenic 40.0%
! TCCTCTGAGAAGAGTAGAAA+TGG - tig0023317:34930-34949 Msa1407590:intron 40.0%
TCCATTTCTACTCTTCTCAG+AGG + tig0023317:34934-34953 None:intergenic 40.0%
TGGATCTTCACCTAATCCAA+AGG + tig0023317:35117-35136 None:intergenic 40.0%
GGCTTCTTAATGCAACATGT+GGG - tig0023317:35363-35382 Msa1407590:CDS 40.0%
GCACAAGAAGAAGGTTTGAA+AGG + tig0023317:35472-35491 None:intergenic 40.0%
TCAAACCTTCTTCTTGTGCT+TGG - tig0023317:35473-35492 Msa1407590:intron 40.0%
AAGTTCCAAGCACAAGAAGA+AGG + tig0023317:35481-35500 None:intergenic 40.0%
!!! CTTTTTTTTGCTCCACTCCA+AGG + tig0023317:35529-35548 None:intergenic 40.0%
CTTGGAGTGGAGCAAAAAAA+AGG - tig0023317:35527-35546 Msa1407590:intron 40.0%
ATTGTTTGCGAATGTCAGTG+AGG - tig0023317:35618-35637 Msa1407590:intron 40.0%
TAAATAGGGTGCAGACTTGA+TGG - tig0023317:35726-35745 Msa1407590:intron 40.0%
!!! GACTTGATGGTTTTCAAGTC+TGG - tig0023317:35739-35758 Msa1407590:intron 40.0%
ATTCGCGAAGATAGCGAATA+AGG + tig0023317:35903-35922 None:intergenic 40.0%
CTGATGTCACCTAACTTACT+TGG + tig0023317:36326-36345 None:intergenic 40.0%
! GAATACCCTGAACTTTTTGC+AGG - tig0023317:36467-36486 Msa1407590:intron 40.0%
CTTGACCTGCAAAAAGTTCA+GGG + tig0023317:36475-36494 None:intergenic 40.0%
!!! GTAGAAACTTGGGTTGGTTT+TGG + tig0023317:36500-36519 None:intergenic 40.0%
! GCTTTTGTAGAAACTTGGGT+TGG + tig0023317:36506-36525 None:intergenic 40.0%
TAAGACTGTAGCTGCTATTC+AGG - tig0023317:36580-36599 Msa1407590:intron 40.0%
GATATGAGATGTGAAGTTGG+GGG - tig0023317:36786-36805 Msa1407590:intron 40.0%
ATATGAGATGTGAAGTTGGG+GGG - tig0023317:36787-36806 Msa1407590:intron 40.0%
CATCCCTCATCTATTAACAG+TGG - tig0023317:36859-36878 Msa1407590:intron 40.0%
GAGACCACTGTTAATAGATG+AGG + tig0023317:36866-36885 None:intergenic 40.0%
! CCGGCAATCTTGTTTATCAT+AGG + tig0023317:37056-37075 None:intergenic 40.0%
ATGATAAACAAGATTGCCGG+TGG - tig0023317:37056-37075 Msa1407590:CDS 40.0%
TCATTGTGGTGAGCTACAAA+TGG + tig0023317:37095-37114 None:intergenic 40.0%
AGCTGCTTGAGATAAAGTTC+TGG + tig0023317:37149-37168 None:intergenic 40.0%
AGAACTTTATCTCAAGCAGC+TGG - tig0023317:37148-37167 Msa1407590:intron 40.0%
! TGAACTCAGGAGTATGTGTA+AGG + tig0023317:37235-37254 None:intergenic 40.0%
AAATCACAGGTAGTGAACTC+AGG + tig0023317:37248-37267 None:intergenic 40.0%
GTCTATTCACGAACTCACAA+AGG - tig0023317:37403-37422 Msa1407590:intron 40.0%
CTAATTTCTCAAAGCCTGCA+AGG - tig0023317:37641-37660 Msa1407590:CDS 40.0%
!! GTTCTGGCTTTAAGATGTTG+TGG - tig0023317:37957-37976 Msa1407590:CDS 40.0%
CCTAAGTGAATGCACAAGTT+CGG - tig0023317:37997-38016 Msa1407590:CDS 40.0%
TATATCAACCTCTAGCTGAC+AGG - tig0023317:38083-38102 Msa1407590:intron 40.0%
! CATTGCACATGTTCTGAGTA+TGG - tig0023317:38370-38389 Msa1407590:intron 40.0%
GATTGCTTGATGTGTGATCA+AGG - tig0023317:38394-38413 Msa1407590:intron 40.0%
GATGAGGATGGAAGGTTTAA+AGG - tig0023317:38631-38650 Msa1407590:intron 40.0%
GATGGAAGGTTTAAAGGCTT+TGG - tig0023317:38637-38656 Msa1407590:CDS 40.0%
TCTATCTAGCATTAGATGCC+AGG - tig0023317:38880-38899 Msa1407590:exon 40.0%
GTATCTTGCTTTCATGACCA+AGG - tig0023317:38909-38928 Msa1407590:five_prime_UTR 40.0%
! ATGCTTTGAGTGTAGTGAAC+TGG - tig0023317:39127-39146 Msa1407590:intron 40.0%
!!! ATATTTTTTGCTTCCCCACC+AGG - tig0023317:39231-39250 Msa1407590:intron 40.0%
!! TGAGCATTGGAGAAACGAAA+TGG - tig0023317:39548-39567 Msa1407590:intron 40.0%
AGCAACTGCATTGTCTTTCT+TGG + tig0023317:39678-39697 None:intergenic 40.0%
AAAGCTGAAAAATCCTTGGG+AGG - tig0023317:39753-39772 Msa1407590:five_prime_UTR 40.0%
!! AGGCTGGTTCCAATTTGTTA+GGG - tig0023317:39776-39795 Msa1407590:five_prime_UTR 40.0%
GGTGATTGTCCCTAACAAAT+TGG + tig0023317:39788-39807 None:intergenic 40.0%
AACTCCACAAACAACACTGT+AGG + tig0023317:39852-39871 None:intergenic 40.0%
!! TACAGTGTTGTTTGTGGAGT+TGG - tig0023317:39851-39870 Msa1407590:five_prime_UTR 40.0%
GATTCTATGGAGTTTGGGTG+AGG + tig0023317:32593-32612 None:intergenic 45.0%
GTTCAAGGGAAGAGGATAAG+AGG + tig0023317:32674-32693 None:intergenic 45.0%
ATATTCAGTGCCCATGCAAG+AGG + tig0023317:32751-32770 None:intergenic 45.0%
CTCAAGACCTGATGTTGTTG+TGG - tig0023317:33591-33610 Msa1407590:three_prime_UTR 45.0%
AGACCTGATGTTGTTGTGGT+AGG - tig0023317:33595-33614 Msa1407590:three_prime_UTR 45.0%
ACTCCTACCACAACAACATC+AGG + tig0023317:33601-33620 None:intergenic 45.0%
! CTCTTTTGTGACCAATGCCT+AGG + tig0023317:33786-33805 None:intergenic 45.0%
GACTGGTAGGTGTTTGGAAA+TGG - tig0023317:33998-34017 Msa1407590:intron 45.0%
CATTGTGTTTCGACTGTCCT+CGG + tig0023317:34229-34248 None:intergenic 45.0%
GAAATCCAGGGAAATCTTGG+TGG - tig0023317:34416-34435 Msa1407590:intron 45.0%
AATCTTGGTGGAGCTCGAAT+AGG - tig0023317:34428-34447 Msa1407590:intron 45.0%
TCCAGCAACAAATTCGCAGA+CGG + tig0023317:34467-34486 None:intergenic 45.0%
ACCTGTAGGACCAATGAAGA+AGG + tig0023317:35233-35252 None:intergenic 45.0%
GGGCTTCTTAATGCAACATG+TGG - tig0023317:35362-35381 Msa1407590:CDS 45.0%
AGTTCGAGATACTACTGACC+TGG + tig0023317:36227-36246 None:intergenic 45.0%
! CCTAACTTACTTGGTGACTC+TGG + tig0023317:36317-36336 None:intergenic 45.0%
CCAGAGTCACCAAGTAAGTT+AGG - tig0023317:36314-36333 Msa1407590:intron 45.0%
CCTTGACCTGCAAAAAGTTC+AGG + tig0023317:36476-36495 None:intergenic 45.0%
! CCTGAACTTTTTGCAGGTCA+AGG - tig0023317:36473-36492 Msa1407590:intron 45.0%
! AGGTTTTTGTGCAGTTGGGT+TGG + tig0023317:36537-36556 None:intergenic 45.0%
! CAGCAGGTTTTTGTGCAGTT+GGG + tig0023317:36541-36560 None:intergenic 45.0%
GCAACTGGCATCAGAATACT+TGG + tig0023317:36977-36996 None:intergenic 45.0%
TCAAGCAGCTGGTTGTTTGT+GGG - tig0023317:37159-37178 Msa1407590:intron 45.0%
TCCATGAAGATGTACCTTGC+AGG + tig0023317:37658-37677 None:intergenic 45.0%
CCGAACTTGTGCATTCACTT+AGG + tig0023317:38000-38019 None:intergenic 45.0%
AACACAAACCTGTCAGCTAG+AGG + tig0023317:38094-38113 None:intergenic 45.0%
TGCTAGAGGCTATTGATCTG+AGG - tig0023317:38172-38191 Msa1407590:intron 45.0%
TTTCTTCCAAGATTGCGGAG+AGG - tig0023317:38585-38604 Msa1407590:intron 45.0%
TGTACGTCTTGCTTCAGATG+AGG - tig0023317:38615-38634 Msa1407590:intron 45.0%
TTGCTTCAGATGAGGATGGA+AGG - tig0023317:38623-38642 Msa1407590:intron 45.0%
TGTTGAGTTTGCAACTGCAG+TGG - tig0023317:38663-38682 Msa1407590:CDS 45.0%
TTAGAACCTCCCTCCAAACT+CGG + tig0023317:39650-39669 None:intergenic 45.0%
CAGTTGCTTGATGTGCTTAC+CGG - tig0023317:39690-39709 Msa1407590:five_prime_UTR 45.0%
!! TTCAGCTTTGTTACGCTCAG+CGG + tig0023317:39742-39761 None:intergenic 45.0%
! GAGGCTGGTTCCAATTTGTT+AGG - tig0023317:39775-39794 Msa1407590:five_prime_UTR 45.0%
TAGGGACAATCACCTACAAG+AGG - tig0023317:39794-39813 Msa1407590:five_prime_UTR 45.0%
AGGGACAATCACCTACAAGA+GGG - tig0023317:39795-39814 Msa1407590:five_prime_UTR 45.0%
!! TCCTCCTACAGTGTTGTTTG+TGG - tig0023317:39845-39864 Msa1407590:five_prime_UTR 45.0%
TCCACAAACAACACTGTAGG+AGG + tig0023317:39849-39868 None:intergenic 45.0%
!! AATATATAATAAAATGAAAT+AGG + tig0023317:35556-35575 None:intergenic 5.0%
GAGAGAGACATGGGAAGAAG+GGG + tig0023317:32535-32554 None:intergenic 50.0%
CGAGAGAGACATGGGAAGAA+GGG + tig0023317:32536-32555 None:intergenic 50.0%
CCTTCTTCCCATGTCTCTCT+CGG - tig0023317:32534-32553 Msa1407590:three_prime_UTR 50.0%
TTGGGGCTAAGAGAGTGAGA+GGG + tig0023317:32560-32579 None:intergenic 50.0%
! TTTGGGGCTAAGAGAGTGAG+AGG + tig0023317:32561-32580 None:intergenic 50.0%
AGAGAGAGGGACACGTTCAA+GGG + tig0023317:32688-32707 None:intergenic 50.0%
TGCAGCAGATCCTAAGTTGC+TGG - tig0023317:33725-33744 Msa1407590:three_prime_UTR 50.0%
GTAACACCGTACCTGTACCT+AGG - tig0023317:33766-33785 Msa1407590:CDS 50.0%
CCAATGCCTAGGTACAGGTA+CGG + tig0023317:33775-33794 None:intergenic 50.0%
TGTGACCAATGCCTAGGTAC+AGG + tig0023317:33780-33799 None:intergenic 50.0%
GCTTTGGCAATCACCAATCC+TGG - tig0023317:33976-33995 Msa1407590:intron 50.0%
!! ATCACCAATCCTGGACTGGT+AGG - tig0023317:33985-34004 Msa1407590:intron 50.0%
AACACCTACCAGTCCAGGAT+TGG + tig0023317:33992-34011 None:intergenic 50.0%
!! ATCCTGGACTGGTAGGTGTT+TGG - tig0023317:33992-34011 Msa1407590:intron 50.0%
TTCCAAACACCTACCAGTCC+AGG + tig0023317:33997-34016 None:intergenic 50.0%
!! ACCGTCTGCGAATTTGTTGC+TGG - tig0023317:34463-34482 Msa1407590:intron 50.0%
TTGCTGGAATACTCGCGACT+TGG - tig0023317:34479-34498 Msa1407590:intron 50.0%
! ATACTCGCGACTTGGCTTAG+TGG - tig0023317:34487-34506 Msa1407590:intron 50.0%
TCTGCATAGCTGAGTGCAAG+TGG + tig0023317:34526-34545 None:intergenic 50.0%
GCCTTCTTCATTGGTCCTAC+AGG - tig0023317:35229-35248 Msa1407590:CDS 50.0%
CTTGGAACTTCCCTGCTTTG+TGG - tig0023317:35491-35510 Msa1407590:intron 50.0%
TGCAATGCCACCACAAAGCA+GGG + tig0023317:35504-35523 None:intergenic 50.0%
TTGCAATGCCACCACAAAGC+AGG + tig0023317:35505-35524 None:intergenic 50.0%
TGTGGTGGCATTGCAATCCT+TGG - tig0023317:35509-35528 Msa1407590:intron 50.0%
TGGCATTGCAATCCTTGGAG+TGG - tig0023317:35514-35533 Msa1407590:intron 50.0%
GAATGTCAGTGAGGTTAGCG+TGG - tig0023317:35627-35646 Msa1407590:intron 50.0%
! GCAGCAGGTTTTTGTGCAGT+TGG + tig0023317:36542-36561 None:intergenic 50.0%
GCTACAGTCTTAGCATGTGG+TGG + tig0023317:36572-36591 None:intergenic 50.0%
GCAGCTACAGTCTTAGCATG+TGG + tig0023317:36575-36594 None:intergenic 50.0%
TGTAGCTGCTATTCAGGCAG+AGG - tig0023317:36586-36605 Msa1407590:intron 50.0%
ATGTGAAGTTGGGGGGAGAA+GGG - tig0023317:36794-36813 Msa1407590:intron 50.0%
CTCAAGCAGCTGGTTGTTTG+TGG - tig0023317:37158-37177 Msa1407590:intron 50.0%
GCCTGCAAGGTACATCTTCA+TGG - tig0023317:37654-37673 Msa1407590:CDS 50.0%
GATGTTGTGGAAAGCGGTGA+AGG - tig0023317:37970-37989 Msa1407590:CDS 50.0%
TGATGTGTGATCAAGGCCCA+TGG - tig0023317:38401-38420 Msa1407590:intron 50.0%
CAACAACCTCTCCGCAATCT+TGG + tig0023317:38594-38613 None:intergenic 50.0%
CGTCTTGCTTCAGATGAGGA+TGG - tig0023317:38619-38638 Msa1407590:intron 50.0%
TTCAAACCGAGTTTGGAGGG+AGG - tig0023317:39641-39660 Msa1407590:five_prime_UTR 50.0%
GAGTTTGGAGGGAGGTTCTA+AGG - tig0023317:39649-39668 Msa1407590:five_prime_UTR 50.0%
GCGGCAATCGTATTCATGAC+CGG + tig0023317:39712-39731 None:intergenic 50.0%
TGTTACGCTCAGCGGTAATG+AGG + tig0023317:39734-39753 None:intergenic 50.0%
GCTGAAAAATCCTTGGGAGG+AGG - tig0023317:39756-39775 Msa1407590:five_prime_UTR 50.0%
AAAAATCCTTGGGAGGAGGC+TGG - tig0023317:39760-39779 Msa1407590:five_prime_UTR 50.0%
CCGAGAGAGACATGGGAAGA+AGG + tig0023317:32537-32556 None:intergenic 55.0%
AGGGACACGTTCAAGGGAAG+AGG + tig0023317:32682-32701 None:intergenic 55.0%
GAGAGAGAGGGACACGTTCA+AGG + tig0023317:32689-32708 None:intergenic 55.0%
CCGTACCTGTACCTAGGCAT+TGG - tig0023317:33772-33791 Msa1407590:CDS 55.0%
ATGTGGTTCTTGCAGGGGAG+CGG - tig0023317:33954-33973 Msa1407590:intron 55.0%
GGCAATCACCAATCCTGGAC+TGG - tig0023317:33981-34000 Msa1407590:intron 55.0%
GAGCTCCACCAAGATTTCCC+TGG + tig0023317:34424-34443 None:intergenic 55.0%
GGAACTTCCCTGCTTTGTGG+TGG - tig0023317:35494-35513 Msa1407590:intron 55.0%
GTCAGTGAGGTTAGCGTGGA+TGG - tig0023317:35631-35650 Msa1407590:intron 55.0%
!! TGCAGTTGGGTTGGCAGAAG+AGG + tig0023317:36528-36547 None:intergenic 55.0%
!! TGTGGTGGACGATATGCAGC+AGG + tig0023317:36557-36576 None:intergenic 55.0%
GATGTGAAGTTGGGGGGAGA+AGG - tig0023317:36793-36812 Msa1407590:intron 55.0%
GCAGCTGGTTGTTTGTGGGA+TGG - tig0023317:37163-37182 Msa1407590:intron 55.0%
TCTGCACTTGTGGCACTTGC+AGG - tig0023317:39352-39371 Msa1407590:intron 55.0%
GGCACTTGCAGGAACTGCAT+TGG - tig0023317:39363-39382 Msa1407590:intron 55.0%
TACGCTCAGCGGTAATGAGG+CGG + tig0023317:39731-39750 None:intergenic 55.0%
ACAGCATGTCGCCCTCTTGT+AGG + tig0023317:39809-39828 None:intergenic 55.0%
GAGAGGGCCGAGAGAGACAT+GGG + tig0023317:32544-32563 None:intergenic 60.0%
TGAGAGGGCCGAGAGAGACA+TGG + tig0023317:32545-32564 None:intergenic 60.0%
TTCTTGCAGGGGAGCGGCTT+TGG - tig0023317:33960-33979 Msa1407590:intron 60.0%
! CTCGCGACTTGGCTTAGTGG+AGG - tig0023317:34490-34509 Msa1407590:intron 60.0%
TTGGAACCAGCCTCCTCCCA+AGG + tig0023317:39769-39788 None:intergenic 60.0%
! TGGACGTGCTGCTGCGCCAC+CGG + tig0023317:37075-37094 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0023317 gene 32500 39953 32500 ID=Msa1407590;Name=Msa1407590
tig0023317 mRNA 32500 39953 32500 ID=Msa1407590-mRNA-1;Parent=Msa1407590;Name=Msa1407590-mRNA-1;_AED=0.21;_eAED=0.21;_QI=389|0.5|0.6|1|0.92|1|15|1245|558
tig0023317 exon 32500 33874 32500 ID=Msa1407590-mRNA-1:exon:25223;Parent=Msa1407590-mRNA-1
tig0023317 exon 34742 34861 34742 ID=Msa1407590-mRNA-1:exon:25222;Parent=Msa1407590-mRNA-1
tig0023317 exon 34952 35050 34952 ID=Msa1407590-mRNA-1:exon:25221;Parent=Msa1407590-mRNA-1
tig0023317 exon 35135 35409 35135 ID=Msa1407590-mRNA-1:exon:25220;Parent=Msa1407590-mRNA-1
tig0023317 exon 35846 35964 35846 ID=Msa1407590-mRNA-1:exon:25219;Parent=Msa1407590-mRNA-1
tig0023317 exon 36127 36151 36127 ID=Msa1407590-mRNA-1:exon:25218;Parent=Msa1407590-mRNA-1
tig0023317 exon 36226 36289 36226 ID=Msa1407590-mRNA-1:exon:25217;Parent=Msa1407590-mRNA-1
tig0023317 exon 37006 37127 37006 ID=Msa1407590-mRNA-1:exon:25216;Parent=Msa1407590-mRNA-1
tig0023317 exon 37203 37327 37203 ID=Msa1407590-mRNA-1:exon:25215;Parent=Msa1407590-mRNA-1
tig0023317 exon 37439 37686 37439 ID=Msa1407590-mRNA-1:exon:25214;Parent=Msa1407590-mRNA-1
tig0023317 exon 37872 38028 37872 ID=Msa1407590-mRNA-1:exon:25213;Parent=Msa1407590-mRNA-1
tig0023317 exon 38451 38484 38451 ID=Msa1407590-mRNA-1:exon:25212;Parent=Msa1407590-mRNA-1
tig0023317 exon 38635 38742 38635 ID=Msa1407590-mRNA-1:exon:25211;Parent=Msa1407590-mRNA-1
tig0023317 exon 38841 38930 38841 ID=Msa1407590-mRNA-1:exon:25210;Parent=Msa1407590-mRNA-1
tig0023317 exon 39604 39953 39604 ID=Msa1407590-mRNA-1:exon:25209;Parent=Msa1407590-mRNA-1
tig0023317 five_prime_UTR 39604 39953 39604 ID=Msa1407590-mRNA-1:five_prime_utr;Parent=Msa1407590-mRNA-1
tig0023317 five_prime_UTR 38892 38930 38892 ID=Msa1407590-mRNA-1:five_prime_utr;Parent=Msa1407590-mRNA-1
tig0023317 CDS 38841 38891 38841 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 38635 38742 38635 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 38451 38484 38451 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 37872 38028 37872 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 37439 37686 37439 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 37203 37327 37203 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 37006 37127 37006 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 36226 36289 36226 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 36127 36151 36127 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 35846 35964 35846 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 35135 35409 35135 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 34952 35050 34952 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 34742 34861 34742 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 CDS 33745 33874 33745 ID=Msa1407590-mRNA-1:cds;Parent=Msa1407590-mRNA-1
tig0023317 three_prime_UTR 32500 33744 32500 ID=Msa1407590-mRNA-1:three_prime_utr;Parent=Msa1407590-mRNA-1
Gene Sequence

>Msa1407590

ATGAAAATTGCTGAACTAGAACAAGTTAGCTCAAGACCTGATGTTGTTGTGGTTTGGGATGCTACTGCAGCAGATCCTAAGTTGCTGGTGTTTTTGAAATCTTATCGTAACACCGTACCTGTACCTAGGCATTGGTCACAAAAGAGAAAATTTTTGCAGGGGAGCGGCTTTGGCAATCACCAATCCTGGACTGGGAAATCTTGGTGGAGCTCGAATAGGAATAGTTGCGAAACCGTCTGCGAATTTGTTGCTGGAATACTCGCGACTTGGCTTAGTGGAGGTGTTGTTGTTCCACTTGCACTCAGCTATGCAGAAGTAGAGCTTCTCTATGTGATGAATAATTCGGTTCGTATATATGATGTAAATATGCTTCAAAATGAACCTTACCTAAGGAAGAAAAATGTTGGCGATGTGTCTGCTATATTGAGTACTGAAGATCATGGTGAATTAATGCAAAGCATTGCCAATAAAACCTCTTCTCAGTTTTTCCATATTCTGCCTGTTCCTAATAATTCCTCTGAGAAGAGTAGAAATGGACATTCACAAAATGGGGAAATTGATGCAGACAGAATTTTCCTGAAAAATGTCGAAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAACGGGACAACAGTTAAAAACAAACAGATATTAGATTGTATGCTGGTTGTTACTTCAAATTTTGCAGACAAATTGCCTTCTTCATTGGTCCTACAGCTAAATGTTTATGTATTCTCTATTATTACAGTTGGAGGGCTTCTTAATGCAACATGTGGGAATATTAGTGAGCTGATAATAGCAATATTTACTCTTAGCAGCAACCAAATTGTTGTTGTCAAGATCAAGATTTTTCACTATAATGGGTCATTGTACTTCAAGGAGATGTTTGACAAGTTATACCAGGCTGATTGGAAACCAGAGTCACCAAGTCAAGGACCAAAACCAACCCAAGTTTCTACAAAAGCCTCTTCTGCCAACCCAACTGCACAAAAACCTGCTGCATATCGTCCACCACATGCTAAGACTGTAGCTGCTATTCAGGCAGAGGTTGAAACACCTATGATAAACAAGATTGCCGGTGGCGCAGCAGCACGTCCATTTGTAGCTCACCACAATGAACTTGACGTAAAGTTGTTCATGAGAATTGCTCCAGAACTTTATCTCAAGCAGCTGGTTGTTTGTGGGATGGAACATGTTTATGAAATTGGTAAACAATTTAGAAATGAGGATATAGACCTTACACATACTCCTGAGTTCACTACCTGTGATTTTTATATGGCTTATAATGACTACAACGACCTAATGGCGATAACACAGAAAATGTCTATTCACGAACTCACAAAGGGAAGCTATAAAATCAAATATCATGCAAATGGGGTTGATAAAGATCCTATTGAAATAGACTTCACTCCACCCTTCAGGAATAATGCTGATTTGGTTATGTGGTTTTATTATTCTTCTATGGAATGTCTAATTTCTCAAAGCCTGCAAGGTACATCTTCATGGAAATTCAGAAGATTGATAGCAATTATTATCCTGAGAGAAAATTTCTTCCAAGATTGCGGAGAGGTTGTTGATGTACGTCTTGCTTCAGATGAGGATGGAAGGTTTAAAGGCTTTGGACATGTTGAGTTTGCAACTGCAGTGGCAGCCCAAAGCGTAAGCTCTTAA
Protein sequence

>Msa1407590

MKIAELEQVSSRPDVVVVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKFLQGSGFGNHQSWTGKSWWSSNRNSCETVCEFVAGILATWLSGGVVVPLALSYAEVELLYVMNNSVRIYDVNMLQNEPYLRKKNVGDVSAILSTEDHGELMQSIANKTSSQFFHILPVPNNSSEKSRNGHSQNGEIDADRIFLKNVERSSEDPALILYTNGTTVKNKQILDCMLVVTSNFADKLPSSLVLQLNVYVFSIITVGGLLNATCGNISELIIAIFTLSSNQIVVVKIKIFHYNGSLYFKEMFDKLYQADWKPESPSQGPKPTQVSTKASSANPTAQKPAAYRPPHAKTVAAIQAEVETPMINKIAGGAAARPFVAHHNELDVKLFMRIAPELYLKQLVVCGMEHVYEIGKQFRNEDIDLTHTPEFTTCDFYMAYNDYNDLMAITQKMSIHELTKGSYKIKYHANGVDKDPIEIDFTPPFRNNADLVMWFYYSSMECLISQSLQGTSSWKFRRLIAIIILRENFFQDCGEVVDVRLASDEDGRFKGFGHVEFATAVAAQSVSS*