AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1418520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418520 MtrunA17_Chr1g0201151 96.440 646 16 1 1 639 1 646 0.0 1276
Msa1418520 MtrunA17_Chr6g0465751 64.107 638 205 8 1 632 1 620 0.0 790
Msa1418520 MtrunA17_Chr6g0466501 63.963 641 201 9 1 634 1 618 0.0 778
Msa1418520 MtrunA17_Chr6g0465631 66.858 522 163 4 104 625 1 512 0.0 697
Msa1418520 MtrunA17_Chr6g0466451 66.667 522 164 4 104 625 1 512 0.0 696
Msa1418520 MtrunA17_Chr4g0044541 59.150 612 225 13 27 623 31 632 0.0 687
Msa1418520 MtrunA17_Chr6g0465691 63.768 552 177 6 89 634 2 536 0.0 674
Msa1418520 MtrunA17_Chr6g0465691 34.386 285 168 5 30 299 31 311 3.21e-41 157
Msa1418520 MtrunA17_Chr0c09g0493511 63.406 552 183 6 89 634 2 540 0.0 669
Msa1418520 MtrunA17_Chr0c09g0493511 35.439 285 165 5 30 299 31 311 1.33e-44 167
Msa1418520 MtrunA17_Chr1g0153181 56.320 625 254 11 27 639 29 646 0.0 657
Msa1418520 MtrunA17_Chr3g0134141 56.447 636 244 12 13 639 7 618 0.0 634
Msa1418520 MtrunA17_Chr7g0265341 43.021 609 314 10 30 619 70 664 1.27e-146 441
Msa1418520 MtrunA17_Chr1g0179701 41.667 480 243 9 6 474 46 499 1.15e-113 352
Msa1418520 MtrunA17_Chr3g0110211 35.556 180 113 3 29 206 24 202 1.27e-30 124
Msa1418520 MtrunA17_Chr3g0110211 29.570 186 110 5 212 394 28 195 1.55e-16 82.0
Msa1418520 MtrunA17_Chr3g0110211 28.342 187 124 5 111 292 18 199 7.39e-16 79.7
Msa1418520 MtrunA17_Chr6g0465621 64.286 84 25 1 1 84 1 79 7.66e-28 107
Msa1418520 MtrunA17_Chr6g0466441 64.286 84 25 1 1 84 1 79 7.66e-28 107
Msa1418520 MtrunA17_Chr1g0153871 31.655 278 161 11 29 284 96 366 8.47e-27 113
Msa1418520 MtrunA17_Chr1g0153871 24.113 282 204 6 119 396 98 373 5.98e-23 102
Msa1418520 MtrunA17_Chr0c09g0493521 61.446 83 27 2 1 83 1 78 1.50e-26 103
Msa1418520 MtrunA17_Chr0c09g0493581 65.476 84 22 3 1 83 1 78 4.44e-26 102
Msa1418520 MtrunA17_Chr6g0465701 62.500 88 26 3 1 87 1 82 6.76e-26 102
Msa1418520 MtrunA17_Chr3g0133651 29.242 277 170 10 29 284 92 363 5.87e-25 107
Msa1418520 MtrunA17_Chr3g0133651 25.000 308 212 11 120 421 95 389 3.55e-20 93.6
Msa1418520 MtrunA17_Chr4g0074711 28.881 277 170 9 31 285 75 346 2.84e-24 105
Msa1418520 MtrunA17_Chr4g0074711 23.509 285 204 9 120 397 76 353 2.33e-17 84.7
Msa1418520 MtrunA17_Chr2g0288251 28.223 287 178 11 31 294 61 342 1.71e-23 103
Msa1418520 MtrunA17_Chr2g0288251 23.077 286 205 9 120 397 62 340 2.20e-16 81.6
Msa1418520 MtrunA17_Chr6g0465741 74.576 59 15 0 565 623 40 98 2.34e-22 92.4
Msa1418520 MtrunA17_Chr6g0466541 38.650 163 64 5 243 405 2 128 7.33e-22 91.7
Msa1418520 MtrunA17_Chr6g0466541 37.584 149 69 4 151 299 1 125 5.73e-21 89.4
Msa1418520 MtrunA17_Chr6g0466551 60.000 80 32 0 560 639 34 113 8.57e-22 91.7
Msa1418520 MtrunA17_Chr2g0328791 26.599 297 172 10 31 286 16 307 4.52e-20 93.2
Msa1418520 MtrunA17_Chr8g0344491 26.117 291 167 9 26 280 58 336 2.53e-19 90.9
Msa1418520 MtrunA17_Chr8g0344491 27.063 303 177 10 109 382 57 344 1.11e-17 85.9
Msa1418520 MtrunA17_Chr3g0139111 25.993 277 164 9 31 274 61 329 4.04e-19 90.5
Msa1418520 MtrunA17_Chr3g0139111 25.685 292 190 6 110 383 52 334 4.11e-18 87.4
Msa1418520 MtrunA17_Chr4g0045221 27.609 297 166 11 31 285 117 406 6.77e-19 90.1
Msa1418520 MtrunA17_Chr4g0045221 28.141 199 123 7 198 392 113 295 1.47e-12 70.1
Msa1418520 MtrunA17_Chr4g0070231 25.083 303 178 9 8 270 17 310 1.76e-18 88.2
Msa1418520 MtrunA17_Chr4g0070231 24.832 298 184 7 110 383 38 319 9.79e-17 82.8
Msa1418520 MtrunA17_Chr4g0026301 25.591 254 173 6 20 267 100 343 1.41e-15 80.1
Msa1418520 MtrunA17_Chr3g0116631 31.771 192 119 5 206 394 106 288 2.10e-15 77.4
Msa1418520 MtrunA17_Chr3g0116631 26.519 181 111 4 26 190 105 279 3.02e-11 64.7
Msa1418520 MtrunA17_Chr1g0177101 29.012 162 103 2 32 181 110 271 4.98e-15 76.6
Msa1418520 MtrunA17_Chr1g0177101 28.649 185 114 5 211 388 110 283 1.22e-11 66.2
Msa1418520 MtrunA17_Chr1g0177101 28.235 170 107 6 117 274 107 273 4.06e-11 64.7
Msa1418520 MtrunA17_Chr7g0267571 25.854 205 131 4 32 220 111 310 4.63e-14 73.6
Msa1418520 MtrunA17_Chr7g0276201 23.273 275 197 5 22 291 96 361 7.93e-14 74.3
Msa1418520 MtrunA17_Chr3g0101061 25.490 255 132 11 211 423 42 280 1.78e-13 73.2
Msa1418520 MtrunA17_Chr3g0101061 28.324 173 106 6 118 274 40 210 9.71e-11 64.7
Msa1418520 MtrunA17_Chr7g0217261 23.636 275 197 5 20 290 339 604 2.53e-13 73.2
Msa1418520 MtrunA17_Chr1g0181111 29.412 187 107 4 29 190 83 269 3.65e-13 70.5
Msa1418520 MtrunA17_Chr1g0181111 29.208 202 114 5 120 299 86 280 1.05e-12 68.9
Msa1418520 MtrunA17_Chr7g0259641 31.304 230 136 12 102 318 571 791 7.12e-13 72.0
Msa1418520 MtrunA17_Chr7g0259641 28.936 235 144 10 181 402 553 777 7.81e-12 68.6
Msa1418520 MtrunA17_Chr5g0411091 34.595 185 108 7 210 391 97 271 7.23e-13 70.1
Msa1418520 MtrunA17_Chr4g0058151 30.645 186 116 5 211 394 124 298 1.55e-12 68.9
Msa1418520 MtrunA17_Chr4g0031091 37.805 82 50 1 112 192 27 108 3.64e-12 63.5
Msa1418520 MtrunA17_Chr8g0335981 22.711 273 186 8 32 291 217 477 3.80e-12 69.7
Msa1418520 MtrunA17_Chr7g0268551 27.011 348 203 15 209 549 16 319 4.85e-12 68.6
Msa1418520 MtrunA17_Chr1g0211191 31.333 150 85 3 42 174 82 230 1.83e-11 66.6
Msa1418520 MtrunA17_Chr2g0290191 27.717 184 104 8 211 378 6 176 1.99e-11 66.6
Msa1418520 MtrunA17_Chr3g0087481 31.217 189 119 6 193 378 45 225 3.11e-11 63.9
Msa1418520 MtrunA17_Chr4g0068631 25.128 195 124 6 208 396 87 265 3.79e-11 66.2
Msa1418520 MtrunA17_Chr8g0360551 27.801 241 151 7 148 381 10 234 6.66e-11 65.1
Msa1418520 MtrunA17_Chr3g0119311 37.838 74 45 1 120 192 38 111 9.20e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418520 AT1G71770.1 57.532 624 242 13 29 633 58 677 0.0 692
Msa1418520 AT1G71770.2 57.532 624 242 13 29 633 58 677 0.0 692
Msa1418520 AT1G22760.1 57.369 631 236 13 4 619 31 643 0.0 680
Msa1418520 AT4G34110.1 55.000 640 258 14 10 638 9 629 0.0 646
Msa1418520 AT1G49760.1 54.976 633 254 15 29 639 44 667 0.0 626
Msa1418520 AT1G49760.2 54.976 633 254 15 29 639 44 667 0.0 626
Msa1418520 AT2G23350.1 53.407 631 257 15 30 639 46 660 0.0 615
Msa1418520 AT2G36660.1 38.963 598 331 9 28 624 22 586 9.92e-125 382
Msa1418520 AT1G34140.1 49.515 412 173 8 89 473 2 405 4.87e-119 360
Msa1418520 AT1G34140.1 31.802 283 177 4 31 299 32 312 6.28e-37 143
Msa1418520 AT3G16380.1 45.600 375 198 4 31 402 22 393 1.73e-101 320
Msa1418520 AT3G16380.1 34.138 290 169 6 118 403 21 292 8.46e-40 154
Msa1418520 AT3G16380.1 34.197 193 111 4 205 396 17 194 2.02e-22 102
Msa1418520 AT3G16380.1 33.508 191 105 4 29 201 201 387 1.49e-21 99.4
Msa1418520 AT2G18510.1 33.889 180 116 3 29 206 24 202 3.95e-29 119
Msa1418520 AT2G18510.1 27.273 187 115 5 211 394 27 195 8.23e-15 77.0
Msa1418520 AT1G47500.1 31.673 281 162 11 29 284 102 377 5.76e-27 114
Msa1418520 AT1G47500.1 26.071 280 174 12 120 381 105 369 1.33e-19 92.4
Msa1418520 AT3G19130.1 31.544 298 160 12 31 291 109 399 2.87e-26 112
Msa1418520 AT3G19130.1 27.667 300 170 13 116 383 102 386 1.63e-19 92.0
Msa1418520 AT1G47490.1 31.673 281 162 11 29 284 100 375 8.82e-26 110
Msa1418520 AT1G47490.1 26.740 273 181 12 120 381 103 367 1.95e-21 97.8
Msa1418520 AT1G49600.1 29.448 326 186 12 31 324 120 433 1.01e-23 105
Msa1418520 AT1G49600.1 27.622 286 171 11 120 383 121 392 1.20e-19 92.8
Msa1418520 AT1G49600.3 30.847 295 165 11 31 293 120 407 1.14e-23 105
Msa1418520 AT1G49600.3 26.959 319 189 13 114 405 110 411 2.35e-20 94.7
Msa1418520 AT1G49600.2 30.847 295 165 11 31 293 120 407 1.14e-23 105
Msa1418520 AT1G49600.2 26.959 319 189 13 114 405 110 411 2.35e-20 94.7
Msa1418520 AT5G54900.1 27.500 280 176 9 31 288 61 335 1.17e-23 103
Msa1418520 AT5G54900.1 23.826 298 193 11 119 399 61 341 1.20e-15 79.7
Msa1418520 AT1G54080.1 27.273 308 168 11 7 270 32 327 3.34e-23 103
Msa1418520 AT1G54080.1 27.875 287 173 9 109 376 58 329 7.20e-19 90.1
Msa1418520 AT1G54080.1 28.571 175 105 5 210 383 64 219 1.98e-12 70.1
Msa1418520 AT1G11650.2 26.557 305 197 10 2 285 35 333 2.05e-22 100
Msa1418520 AT1G11650.2 23.381 278 199 7 110 379 51 322 3.29e-15 78.6
Msa1418520 AT4G27000.1 27.636 275 174 10 31 285 81 350 3.61e-22 100
Msa1418520 AT4G27000.1 23.973 292 194 11 119 397 81 357 5.36e-14 75.1
Msa1418520 AT1G54080.2 27.244 312 167 12 7 270 32 331 8.30e-22 99.0
Msa1418520 AT1G54080.2 27.835 291 172 10 109 376 58 333 1.77e-17 85.9
Msa1418520 AT1G11650.1 26.182 275 177 9 2 256 35 303 2.68e-20 92.4
Msa1418520 AT3G14100.1 25.267 281 162 8 26 270 55 323 2.99e-19 91.3
Msa1418520 AT3G14100.1 27.758 281 169 8 109 370 54 319 8.67e-17 83.6
Msa1418520 AT3G14100.1 27.473 182 112 5 210 390 60 222 3.26e-12 69.3
Msa1418520 AT5G19350.2 24.731 279 175 7 31 279 25 298 7.72e-19 89.7
Msa1418520 AT5G19350.1 25.088 283 173 7 31 279 25 302 1.46e-18 89.0
Msa1418520 AT1G17370.2 27.491 291 178 10 109 381 49 324 1.35e-16 82.8
Msa1418520 AT1G17370.2 25.540 278 162 9 26 270 50 315 4.61e-16 81.3
Msa1418520 AT1G17370.1 26.871 294 179 10 109 381 49 327 2.87e-16 82.0
Msa1418520 AT1G17370.1 25.623 281 161 9 26 270 50 318 5.42e-16 81.3
Msa1418520 AT1G47500.2 30.058 173 111 6 29 191 102 274 4.81e-16 80.1
Msa1418520 AT4G00830.2 25.912 274 188 6 26 294 112 375 1.21e-15 80.5
Msa1418520 AT4G00830.2 24.372 398 246 13 120 494 118 483 1.14e-14 77.4
Msa1418520 AT4G00830.1 25.912 274 188 6 26 294 112 375 1.21e-15 80.5
Msa1418520 AT4G00830.1 24.372 398 246 13 120 494 118 483 1.14e-14 77.4
Msa1418520 AT4G00830.6 25.912 274 188 6 26 294 112 375 1.21e-15 80.5
Msa1418520 AT4G00830.6 24.372 398 246 13 120 494 118 483 1.14e-14 77.4
Msa1418520 AT2G37220.1 27.419 186 107 3 32 190 93 277 2.16e-15 77.8
Msa1418520 AT4G00830.3 25.830 271 184 6 26 294 112 367 3.01e-15 79.3
Msa1418520 AT4G00830.3 24.874 398 236 14 120 494 118 475 4.23e-14 75.5
Msa1418520 AT4G00830.5 25.830 271 184 6 26 294 112 367 3.01e-15 79.3
Msa1418520 AT4G00830.5 24.874 398 236 14 120 494 118 475 4.23e-14 75.5
Msa1418520 AT1G47490.2 30.058 173 111 6 29 191 100 272 3.37e-15 77.4
Msa1418520 AT4G24770.1 32.979 188 111 6 211 395 152 327 1.36e-14 75.9
Msa1418520 AT4G24770.1 28.324 173 115 3 26 190 146 317 3.40e-12 68.6
Msa1418520 AT4G24770.2 32.979 188 111 6 211 395 152 327 1.36e-14 75.9
Msa1418520 AT4G24770.2 28.324 173 115 3 26 190 146 317 3.40e-12 68.6
Msa1418520 AT1G01080.1 29.843 191 118 6 104 280 95 283 2.87e-14 74.3
Msa1418520 AT1G01080.3 30.978 184 111 6 104 273 95 276 6.51e-14 73.2
Msa1418520 AT1G01080.2 29.688 192 118 6 104 280 95 284 1.02e-13 72.8
Msa1418520 AT4G00830.4 24.311 399 245 14 120 494 118 483 1.06e-13 74.3
Msa1418520 AT4G00830.4 24.818 274 191 6 26 294 112 375 2.41e-12 70.1
Msa1418520 AT2G35410.1 27.419 186 120 4 211 390 97 273 2.64e-13 71.6
Msa1418520 AT2G44710.2 22.677 269 183 8 32 287 216 472 3.12e-13 73.6
Msa1418520 AT2G44710.1 22.677 269 183 8 32 287 216 472 3.12e-13 73.6
Msa1418520 AT2G44710.4 22.677 269 183 8 32 287 131 387 3.32e-13 73.6
Msa1418520 AT3G52380.1 24.000 175 109 3 32 186 118 288 4.47e-13 71.2
Msa1418520 AT3G52380.1 30.052 193 108 8 118 292 116 299 1.33e-11 66.6
Msa1418520 AT3G52380.1 29.032 186 126 5 211 393 118 300 5.74e-11 64.7
Msa1418520 AT3G52150.2 31.319 182 95 6 211 378 78 243 5.85e-13 69.7
Msa1418520 AT3G52150.2 25.434 173 115 3 32 190 78 250 7.51e-11 63.5
Msa1418520 AT3G52150.1 31.319 182 95 6 211 378 78 243 5.85e-13 69.7
Msa1418520 AT3G52150.1 25.434 173 115 3 32 190 78 250 7.51e-11 63.5
Msa1418520 AT5G50250.1 30.890 191 119 6 206 394 110 289 5.99e-13 70.5
Msa1418520 AT5G50250.1 28.333 180 117 4 30 201 113 288 1.22e-12 69.3
Msa1418520 AT5G55550.5 26.531 245 139 11 211 441 8 225 7.73e-13 71.6
Msa1418520 AT5G55550.4 26.531 245 139 11 211 441 8 225 7.73e-13 71.6
Msa1418520 AT5G55550.9 26.531 245 139 11 211 441 8 225 7.73e-13 71.6
Msa1418520 AT5G55550.7 26.531 245 139 11 211 441 8 225 7.73e-13 71.6
Msa1418520 AT5G55550.1 26.531 245 139 11 211 441 8 225 7.73e-13 71.6
Msa1418520 AT5G55550.2 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
Msa1418520 AT5G55550.3 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
Msa1418520 AT5G55550.6 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
Msa1418520 AT5G55550.11 26.531 245 139 11 211 441 8 225 1.04e-12 71.2
Msa1418520 AT3G52660.3 22.177 248 179 4 26 267 88 327 3.66e-12 69.3
Msa1418520 AT3G52660.1 22.177 248 179 4 26 267 88 327 3.66e-12 69.3
Msa1418520 AT3G52660.2 22.177 248 179 4 26 267 88 327 3.66e-12 69.3
Msa1418520 AT5G47620.1 27.624 181 106 8 211 378 8 176 3.71e-12 69.3
Msa1418520 AT5G47620.2 27.624 181 106 8 211 378 8 176 3.71e-12 69.3
Msa1418520 AT5G47620.5 27.624 181 106 8 211 378 8 176 3.71e-12 69.3
Msa1418520 AT4G26650.2 25.405 185 112 6 211 378 14 189 5.35e-12 68.9
Msa1418520 AT1G60000.1 25.698 179 126 3 18 190 73 250 5.45e-12 67.0
Msa1418520 AT4G26650.1 25.405 185 112 6 211 378 17 192 6.01e-12 68.6
Msa1418520 AT3G19350.1 48.485 66 33 1 554 619 23 87 6.99e-12 62.8
Msa1418520 AT5G47620.4 26.702 191 117 7 211 378 8 198 7.37e-12 68.6
Msa1418520 AT1G45100.1 27.684 177 111 3 196 370 143 304 9.01e-12 68.2
Msa1418520 AT1G17640.2 25.683 183 120 4 211 391 68 236 1.55e-11 67.0
Msa1418520 AT1G17640.1 25.683 183 120 4 211 391 68 236 1.55e-11 67.0
Msa1418520 AT1G17640.3 25.683 183 120 4 211 391 68 236 1.55e-11 67.0
Msa1418520 AT5G41690.1 26.943 193 126 4 211 389 70 261 1.67e-11 67.8
Msa1418520 AT5G41690.3 26.943 193 126 4 211 389 70 261 1.67e-11 67.8
Msa1418520 AT5G41690.2 26.943 193 126 4 211 389 70 261 1.67e-11 67.8
Msa1418520 AT4G19610.1 30.636 173 109 5 109 272 595 765 1.74e-11 67.8
Msa1418520 AT4G13850.3 41.333 75 43 1 117 190 34 108 1.83e-11 62.8
Msa1418520 AT3G46020.1 34.737 95 61 1 313 406 7 101 1.89e-11 61.6
Msa1418520 AT4G13850.2 41.333 75 43 1 117 190 34 108 2.24e-11 62.8
Msa1418520 AT4G13850.1 41.333 75 43 1 117 190 34 108 2.50e-11 62.8
Msa1418520 AT4G36960.1 29.940 167 104 6 119 278 4 164 2.65e-11 66.2
Msa1418520 AT4G36960.2 29.940 167 104 6 119 278 4 164 2.65e-11 66.2
Msa1418520 AT5G03580.1 39.241 79 47 1 207 285 15 92 6.29e-11 60.1

Find 197 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATAAGCTATTATTATTT+TGG 0.118284 tig0024604:+53792 Msa1418520:three_prime_UTR
CCGCTGGCTGCAGGGCTTCC+TGG 0.125743 tig0024604:+52550 Msa1418520:CDS
CCCTGTCTTTGGAGCTGATA+TGG 0.234302 tig0024604:-52724 None:intergenic
CTCCAAAGACAGGGTCAAAA+TGG 0.262200 tig0024604:+52733 Msa1418520:CDS
CATACCATGCGCTGATTGTC+TGG 0.263859 tig0024604:-53069 None:intergenic
CATTTGTCCTAACCCTTTCC+TGG 0.268295 tig0024604:-51220 None:intergenic
CCACCTCAGCCTGCTGGATT+TGG 0.272099 tig0024604:+52643 Msa1418520:CDS
CGCTCAGGTTGTTTCAATTA+GGG 0.273509 tig0024604:+49807 Msa1418520:CDS
TCGCTCAGGTTGTTTCAATT+AGG 0.283695 tig0024604:+49806 Msa1418520:CDS
CGCTGGCTGCAGGGCTTCCT+GGG 0.283699 tig0024604:+52551 Msa1418520:CDS
CCGATGACATTTGATGGTTC+TGG 0.284750 tig0024604:+52973 Msa1418520:CDS
CACATACACATTAGTGAACT+TGG 0.296288 tig0024604:-51249 None:intergenic
GGGCTTCCTGGGTACCATCC+AGG 0.299327 tig0024604:+52562 Msa1418520:CDS
ATCCATGCCATTTCGATTGT+TGG 0.315102 tig0024604:-52932 None:intergenic
ACTGCAGCAGCAGCTGAATC+TGG 0.336443 tig0024604:-51407 None:intergenic
GGAATGGCACCGCTGGCTGC+AGG 0.341384 tig0024604:+52541 Msa1418520:CDS
TACCGCTTTATTTGCTTCCT+CGG 0.346237 tig0024604:-51891 None:intergenic
TTGGAACTGTAACATCTTGC+AGG 0.347871 tig0024604:+51639 Msa1418520:CDS
CAGCCCACCAATAACTTATC+TGG 0.350131 tig0024604:-53859 None:intergenic
CATGGTCACAGCAAGGGTTC+TGG 0.350389 tig0024604:+51848 Msa1418520:CDS
CCCTGGTGGAATGGCACCGC+TGG 0.351683 tig0024604:+52534 Msa1418520:CDS
CAACCAAGGGTATAGATATA+TGG 0.354482 tig0024604:+52909 Msa1418520:CDS
AATGGGAAATCTAGATGCTT+TGG 0.369454 tig0024604:+51365 Msa1418520:CDS
AAAGGTCTCTGAGGCATTGC+AGG 0.369465 tig0024604:+53638 Msa1418520:CDS
GCTGCAGTTGAGAAGTTAAA+TGG 0.370195 tig0024604:+51422 Msa1418520:CDS
ACCTTTGCAGTATGTTGGTT+TGG 0.374003 tig0024604:-53543 None:intergenic
CATGCCATCCAACTGTTTGA+TGG 0.376643 tig0024604:-51153 None:intergenic
GCCCCTCAGCAGTTGTATTA+CGG 0.376872 tig0024604:+52598 Msa1418520:CDS
AGAGAGGAAGGCTCAGTTGC+AGG 0.377439 tig0024604:+52060 Msa1418520:CDS
TGAGAAAACATGATACGAAT+AGG 0.384527 tig0024604:-50930 None:intergenic
TGGCCCTGTACTTTCTTGTA+AGG 0.384907 tig0024604:+51055 Msa1418520:CDS
CGGATAGGTGCTCGACGAAA+TGG 0.388336 tig0024604:+52760 Msa1418520:CDS
ATGTTGCCGATGACATTTGA+TGG 0.389353 tig0024604:+52967 Msa1418520:CDS
TAGACCTGAATGATATGAAC+TGG 0.391809 tig0024604:+54015 Msa1418520:three_prime_UTR
GGCTTCCTGGGTACCATCCA+GGG 0.399660 tig0024604:+52563 Msa1418520:CDS
GACAGTAATGGTCAGTCAAA+AGG 0.400879 tig0024604:+51086 Msa1418520:CDS
GGGGCAAGTCTTGGTGCCCC+TGG 0.404417 tig0024604:-52580 None:intergenic
GCAACACCAGGCCGCATTCC+AGG 0.405751 tig0024604:-52685 None:intergenic
AAGCCCAGTTCATATCATTC+AGG 0.407397 tig0024604:-54019 None:intergenic
TTCCAGCAGCAGATCTTGCC+TGG 0.414251 tig0024604:+52667 Msa1418520:CDS
AGAGATTCAAGGACATGTTT+TGG 0.414309 tig0024604:+53888 Msa1418520:three_prime_UTR
CAGGAAAGGGTTAGGACAAA+TGG 0.422143 tig0024604:+51221 Msa1418520:CDS
CCGGTCAATGCTGCCGTCGC+CGG 0.426455 tig0024604:-49697 None:intergenic
ATGATAAACAAGTCTATGTT+GGG 0.427846 tig0024604:+51183 Msa1418520:CDS
CTCAACGTGATCCAAGTGTT+CGG 0.429454 tig0024604:+50949 Msa1418520:CDS
CTCAACTTCACTCCTCTGAA+TGG 0.432562 tig0024604:+50903 Msa1418520:CDS
TGATATGGCATAACAAAATT+CGG 0.436617 tig0024604:-52709 None:intergenic
GATTCTGCTGCACATGTTGG+AGG 0.441316 tig0024604:-52786 None:intergenic
TTCGCCACCAGGAAAGGGTT+AGG 0.441421 tig0024604:+51213 Msa1418520:CDS
AAAGCCTTTGTTTGTTGCTG+TGG 0.442545 tig0024604:+52024 Msa1418520:CDS
TGGCCATATATCTATACCCT+TGG 0.446363 tig0024604:-52912 None:intergenic
ATCTTGCCTGGAATGCGGCC+TGG 0.447751 tig0024604:+52679 Msa1418520:CDS
GTTGCATTATTAGGTGATGT+TGG 0.448677 tig0024604:+51820 Msa1418520:intron
GCCATATCAGCTCCAAAGAC+AGG 0.451036 tig0024604:+52723 Msa1418520:CDS
AATTCTTTCCTGCTCGAACT+TGG 0.452537 tig0024604:-51522 None:intergenic
CAAGTCTTGGTGCCCCTGGA+TGG 0.453330 tig0024604:-52576 None:intergenic
CAGCAAGGGTTCTGGTTTCG+TGG 0.453878 tig0024604:+51856 Msa1418520:CDS
TGCTTCCTCGGGAGTAGAAA+AGG 0.455695 tig0024604:-51879 None:intergenic
ACAGTCATGAAAGATGCAAA+TGG 0.458938 tig0024604:+51347 Msa1418520:CDS
CCCTGTACTTTCTTGTAAGG+TGG 0.459223 tig0024604:+51058 Msa1418520:CDS
TTGTTTCAATTAGGGTCTGT+AGG 0.459272 tig0024604:+49815 Msa1418520:CDS
GTCTCCGAATGTGGTGGCTC+CGG 0.462851 tig0024604:+49678 Msa1418520:CDS
GACAGGGATGTTGCTTGAAA+TGG 0.465292 tig0024604:+53566 Msa1418520:CDS
AATGATAAACAAGTCTATGT+TGG 0.465684 tig0024604:+51182 Msa1418520:CDS
CCTGGACGCTGATTATCAAT+AGG 0.467031 tig0024604:-53009 None:intergenic
TTCATACCACCTCAGCCTGC+TGG 0.468479 tig0024604:+52637 Msa1418520:CDS
CGCATTCACGAACGGTCCTC+CGG 0.469198 tig0024604:-49716 None:intergenic
GTCGCCGGAGCCACCACATT+CGG 0.473001 tig0024604:-49682 None:intergenic
CCGGCGACGGCAGCATTGAC+CGG 0.477791 tig0024604:+49697 Msa1418520:CDS
GTCCTTCATGAAGCTGCATC+GGG 0.478100 tig0024604:+53660 Msa1418520:CDS
ACCGCTTTATTTGCTTCCTC+GGG 0.479649 tig0024604:-51890 None:intergenic
GCCAGCGGTGCCATTCCACC+AGG 0.481094 tig0024604:-52535 None:intergenic
CTGTCACCTTTGCAGTATGT+TGG 0.481467 tig0024604:-53548 None:intergenic
TCAACTTCACTCCTCTGAAT+GGG 0.482554 tig0024604:+50904 Msa1418520:CDS
GAATGTGGTGGCTCCGGCGA+CGG 0.484230 tig0024604:+49684 Msa1418520:CDS
AACTGCTGAGGGGCAAGTCT+TGG 0.488367 tig0024604:-52589 None:intergenic
TATATGGCCAACAATCGAAA+TGG 0.488751 tig0024604:+52925 Msa1418520:CDS
TTCCAGGCAAGATCTGCTGC+TGG 0.488761 tig0024604:-52669 None:intergenic
GCACTAGTTATCTTGCCAAA+GGG 0.490127 tig0024604:-51323 None:intergenic
GTTGAGAAGTTCCTTTGCAT+TGG 0.492750 tig0024604:-50886 None:intergenic
CAACATACTGCAAAGGTGAC+AGG 0.494098 tig0024604:+53549 Msa1418520:CDS
GAATGGCACCGCTGGCTGCA+GGG 0.495319 tig0024604:+52542 Msa1418520:CDS
TCCAAAGACAGGGTCAAAAT+GGG 0.497020 tig0024604:+52734 Msa1418520:CDS
CAGACTAGGCGATCCTCTCT+TGG 0.498348 tig0024604:+49841 Msa1418520:CDS
TGTTTCAATTAGGGTCTGTA+GGG 0.499273 tig0024604:+49816 Msa1418520:CDS
CAATGTGTTCATTAAGAACC+TGG 0.502190 tig0024604:+50986 Msa1418520:CDS
CCTATTGATAATCAGCGTCC+AGG 0.504071 tig0024604:+53009 Msa1418520:CDS
AATCCGTTCCCCTGGTGGAA+TGG 0.506540 tig0024604:+52525 Msa1418520:CDS
TGTGATCAATTGATGTGTCC+AGG 0.506638 tig0024604:-51004 None:intergenic
GATCCAAGTGTTCGGAAAAG+TGG 0.507647 tig0024604:+50957 Msa1418520:CDS
TCTGTTTAGCCAAGTCGCTC+AGG 0.509218 tig0024604:+49792 Msa1418520:CDS
CTTGATTCTGCTGCACATGT+TGG 0.509410 tig0024604:-52789 None:intergenic
GTCCAGTTGAATGAAATGAA+TGG 0.510076 tig0024604:+51986 Msa1418520:intron
TTTGCTCAAATCCGTTCCCC+TGG 0.511063 tig0024604:+52517 Msa1418520:CDS
AGTGTTCGGAAAAGTGGATC+GGG 0.517337 tig0024604:+50963 Msa1418520:CDS
ATACCATGCGCTGATTGTCT+GGG 0.517628 tig0024604:-53068 None:intergenic
GGTCCTTCATGAAGCTGCAT+CGG 0.518569 tig0024604:+53659 Msa1418520:CDS
ACAGTAATGGTCAGTCAAAA+GGG 0.518664 tig0024604:+51087 Msa1418520:CDS
TCAAATGTCATCGGCAACAT+TGG 0.519004 tig0024604:-52964 None:intergenic
AACAGATATGAGAAATTGCA+AGG 0.520125 tig0024604:+51545 Msa1418520:CDS
GGCTGAGGTGGTATGAAGCC+AGG 0.520624 tig0024604:-52631 None:intergenic
TTTACGTTGGCGATCTCGAA+GGG 0.520934 tig0024604:+49743 Msa1418520:CDS
TGTCAACTTCACCAATGCTC+AGG 0.521040 tig0024604:+49873 Msa1418520:CDS
CATATATCTATACCCTTGGT+TGG 0.521460 tig0024604:-52908 None:intergenic
TCTGAAGTTGGTGATCAGCT+TGG 0.524358 tig0024604:+53684 Msa1418520:CDS
GAATGAAATGAATGGAAAGT+TGG 0.530915 tig0024604:+51994 Msa1418520:CDS
GTGCCATTCCACCAGGGGAA+CGG 0.531086 tig0024604:-52528 None:intergenic
GCCACCTTACAAGAAAGTAC+AGG 0.531089 tig0024604:-51059 None:intergenic
TGCACTAGTTATCTTGCCAA+AGG 0.533023 tig0024604:-51324 None:intergenic
CAGTCATGAAAGATGCAAAT+GGG 0.535240 tig0024604:+51348 Msa1418520:CDS
CTTTACGTTGGCGATCTCGA+AGG 0.535531 tig0024604:+49742 Msa1418520:CDS
CCAAATCCAGCAGGCTGAGG+TGG 0.536975 tig0024604:-52643 None:intergenic
GGCTGATATGTAGAGATTCA+AGG 0.536980 tig0024604:+53877 Msa1418520:three_prime_UTR
TTGCCAGATAAGTTATTGGT+GGG 0.540316 tig0024604:+53856 Msa1418520:three_prime_UTR
TGCTGGAAACCAAATCCAGC+AGG 0.541904 tig0024604:-52652 None:intergenic
TATTACGGTCAAGGCACACC+TGG 0.547147 tig0024604:+52613 Msa1418520:CDS
TTTGCCAGATAAGTTATTGG+TGG 0.549894 tig0024604:+53855 Msa1418520:three_prime_UTR
GGTGCCCCTGGATGGTACCC+AGG 0.551085 tig0024604:-52568 None:intergenic
AATGGTCAGTCAAAAGGGTA+TGG 0.555474 tig0024604:+51092 Msa1418520:CDS
TTGAAACAACCTGAGCGACT+TGG 0.559301 tig0024604:-49801 None:intergenic
CGAATAGGTTTCCCATTCAG+AGG 0.559642 tig0024604:-50915 None:intergenic
GCTTCCTGGGTACCATCCAG+GGG 0.561102 tig0024604:+52564 Msa1418520:CDS
ACATACACATTAGTGAACTT+GGG 0.561743 tig0024604:-51248 None:intergenic
ACAAAATTCGGAGCAACACC+AGG 0.561825 tig0024604:-52697 None:intergenic
CCAGGAAGCCCTGCAGCCAG+CGG 0.562572 tig0024604:-52550 None:intergenic
GCTCAAATCCGTTCCCCTGG+TGG 0.562712 tig0024604:+52520 Msa1418520:CDS
CGAAATGGCATGGATCTAGC+AGG 0.564881 tig0024604:+52940 Msa1418520:CDS
GGTCAAAATGGGCAACGGAT+AGG 0.565521 tig0024604:+52745 Msa1418520:CDS
AATTGAAATTATCAGATGCT+CGG 0.569025 tig0024604:+53486 Msa1418520:intron
TAAGATGAATCACTTCGGAT+TGG 0.570286 tig0024604:-53590 None:intergenic
GGCCAACAATCGAAATGGCA+TGG 0.570608 tig0024604:+52930 Msa1418520:CDS
TTCAATAAGATGAATCACTT+CGG 0.573383 tig0024604:-53595 None:intergenic
AAACTCACCATCCTGAGCAT+TGG 0.573445 tig0024604:-49884 None:intergenic
TTGCATCGTAACTCCAACCA+AGG 0.573794 tig0024604:+52895 Msa1418520:CDS
GACCGTAATACAACTGCTGA+GGG 0.575479 tig0024604:-52600 None:intergenic
ATCCCGATGCAGCTTCATGA+AGG 0.575668 tig0024604:-53662 None:intergenic
GAGGCAAGTGATGTAGACCC+TGG 0.581109 tig0024604:-53027 None:intergenic
GATTCACATGGTCACAGCAA+GGG 0.581180 tig0024604:+51842 Msa1418520:CDS
AAGTGTTCGGAAAAGTGGAT+CGG 0.582522 tig0024604:+50962 Msa1418520:CDS
GGATTCACATGGTCACAGCA+AGG 0.582683 tig0024604:+51841 Msa1418520:CDS
CAGCAGTTGTATTACGGTCA+AGG 0.584506 tig0024604:+52604 Msa1418520:CDS
GGCTGCGATTTCATCACCGA+TGG 0.587268 tig0024604:+49651 Msa1418520:CDS
TGGAACTGTAACATCTTGCA+GGG 0.587771 tig0024604:+51640 Msa1418520:CDS
AAACCAAATCCAGCAGGCTG+AGG 0.590059 tig0024604:-52646 None:intergenic
TGAAGTAATTTCAGCTGCAG+TGG 0.592647 tig0024604:+53726 Msa1418520:exon
GACATAAGCGTAACCAAGAG+AGG 0.592663 tig0024604:-49854 None:intergenic
CCAGAACCATCAAATGTCAT+CGG 0.594053 tig0024604:-52973 None:intergenic
CCATATCAGCTCCAAAGACA+GGG 0.596118 tig0024604:+52724 Msa1418520:CDS
AACATACTGCAAAGGTGACA+GGG 0.597579 tig0024604:+53550 Msa1418520:CDS
GTTGAAAGCCAAGTTCGAGC+AGG 0.598139 tig0024604:+51514 Msa1418520:CDS
CTATTGATAATCAGCGTCCA+GGG 0.600399 tig0024604:+53010 Msa1418520:CDS
CACTAGTTATCTTGCCAAAG+GGG 0.600793 tig0024604:-51322 None:intergenic
GCTGCATCGGGATCTGAAGT+TGG 0.602004 tig0024604:+53672 Msa1418520:CDS
TTCTGAAGCATCAACTGATG+AGG 0.602081 tig0024604:+51280 Msa1418520:CDS
TCAGCGCAAAGAAGAGAGGA+AGG 0.604652 tig0024604:+52048 Msa1418520:CDS
AAAGAGTGCCATCAAACAGT+TGG 0.606237 tig0024604:+51145 Msa1418520:CDS
AGCAGATCTTGCCTGGAATG+CGG 0.606792 tig0024604:+52674 Msa1418520:CDS
GACAGGGTCAAAATGGGCAA+CGG 0.607936 tig0024604:+52740 Msa1418520:CDS
GATGGTTCAGTCTCCGAATG+TGG 0.608912 tig0024604:+49669 Msa1418520:CDS
TAAAGTGACGCATTCACGAA+CGG 0.610365 tig0024604:-49724 None:intergenic
AGACCTGAATGATATGAACT+GGG 0.611208 tig0024604:+54016 Msa1418520:three_prime_UTR
CAGCGGTGCCATTCCACCAG+GGG 0.613136 tig0024604:-52533 None:intergenic
CCACCTTACAAGAAAGTACA+GGG 0.613727 tig0024604:-51058 None:intergenic
AACTTCACCAATGCTCAGGA+TGG 0.614190 tig0024604:+49877 Msa1418520:CDS
GTGAATGCGTCACTTTACGT+TGG 0.616829 tig0024604:+49730 Msa1418520:CDS
TGAAATGAATGGAAAGTTGG+TGG 0.617759 tig0024604:+51997 Msa1418520:CDS
TTGGTGTAAGACAGTCCACA+AGG 0.620718 tig0024604:-53524 None:intergenic
TGAGCCACAGCAACAAACAA+AGG 0.620998 tig0024604:-52028 None:intergenic
GGTTCAGTCTCCGAATGTGG+TGG 0.623008 tig0024604:+49672 Msa1418520:CDS
AGTGCCATCAAACAGTTGGA+TGG 0.623280 tig0024604:+51149 Msa1418520:CDS
ACAGATATGAGAAATTGCAA+GGG 0.623843 tig0024604:+51546 Msa1418520:CDS
TGGCTCAGCGCAAAGAAGAG+AGG 0.624005 tig0024604:+52044 Msa1418520:CDS
GGGTCTGTAGGGATCAGACT+AGG 0.624207 tig0024604:+49827 Msa1418520:CDS
TGACCGTAATACAACTGCTG+AGG 0.627393 tig0024604:-52601 None:intergenic
AACTGCTATCAATGATGACA+AGG 0.629314 tig0024604:+51445 Msa1418520:CDS
TCAATTGAGATTCTTCGTAG+AGG 0.631198 tig0024604:+53970 Msa1418520:three_prime_UTR
ACATTCGGAGACTGAACCAT+CGG 0.635247 tig0024604:-49667 None:intergenic
TTGTCCTAACCCTTTCCTGG+TGG 0.635698 tig0024604:-51217 None:intergenic
ACCAAACCAACATACTGCAA+AGG 0.637186 tig0024604:+53542 Msa1418520:CDS
GAAATGAATGGAAAGTTGGT+GGG 0.639653 tig0024604:+51998 Msa1418520:CDS
TACCATGCGCTGATTGTCTG+GGG 0.640655 tig0024604:-53067 None:intergenic
GGACACATCAATTGATCACA+AGG 0.641302 tig0024604:+51007 Msa1418520:CDS
TAGGTGATGTTGGATTCACA+TGG 0.645055 tig0024604:+51830 Msa1418520:intron
TGAACATCTATATCCCCTTG+TGG 0.645248 tig0024604:+53509 Msa1418520:CDS
TACCCCAGACAATCAGCGCA+TGG 0.646578 tig0024604:+53065 Msa1418520:CDS
GGTAGCAGAAGCTAAAGCAG+AGG 0.647511 tig0024604:-53046 None:intergenic
CCAGCGGTGCCATTCCACCA+GGG 0.647668 tig0024604:-52534 None:intergenic
TATTTGTGGGGAGGGCTCAG+AGG 0.651975 tig0024604:+51471 Msa1418520:CDS
CTCGAAGGGAGTGTGAACGA+AGG 0.652910 tig0024604:+49757 Msa1418520:CDS
CAGATATGAGAAATTGCAAG+GGG 0.659567 tig0024604:+51547 Msa1418520:CDS
GGTGTAAGACAGTCCACAAG+GGG 0.660676 tig0024604:-53522 None:intergenic
AAGGTGGCTCTTGACAGTAA+TGG 0.676259 tig0024604:+51074 Msa1418520:CDS
TCCCGAGGAAGCAAATAAAG+CGG 0.679076 tig0024604:+51889 Msa1418520:CDS
GCGACGGCAGCATTGACCGG+AGG 0.692922 tig0024604:+49700 Msa1418520:CDS
TGGTGTAAGACAGTCCACAA+GGG 0.698176 tig0024604:-53523 None:intergenic
TGCATCGTAACTCCAACCAA+GGG 0.699834 tig0024604:+52896 Msa1418520:CDS
ACCGTAATACAACTGCTGAG+GGG 0.736849 tig0024604:-52599 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTTTCTTAAAATTTTA+TGG - tig0024604:50252-50271 None:intergenic 10.0%
!!! TATTAATTTGTATTATTTGA+CGG + tig0024604:50662-50681 Msa1418520:intron 10.0%
!! TAGTTATTAAAAATATCTTA+TGG + tig0024604:50816-50835 Msa1418520:intron 10.0%
!! AAAGTAAATAAATGTTTAAA+GGG - tig0024604:52408-52427 None:intergenic 10.0%
!! GTTTGAATAATTTAATTAAA+GGG - tig0024604:53198-53217 None:intergenic 10.0%
!! TGTTTGAATAATTTAATTAA+AGG - tig0024604:53199-53218 None:intergenic 10.0%
!! CATCCATAATAATTAATATA+TGG + tig0024604:50766-50785 Msa1418520:intron 15.0%
!! CATCCATATATTAATTATTA+TGG - tig0024604:50772-50791 None:intergenic 15.0%
!! CATAATAATTAATATATGGA+TGG + tig0024604:50770-50789 Msa1418520:intron 15.0%
!! AAAAATCAAGAAACAAAAAT+AGG - tig0024604:50860-50879 None:intergenic 15.0%
!! AAATTATATGTTGCATTATT+AGG + tig0024604:51811-51830 Msa1418520:intron 15.0%
!! AAAAATGAATATTTCAACAA+AGG - tig0024604:52191-52210 None:intergenic 15.0%
!!! TATTCATTTTTGCTTATAAT+TGG + tig0024604:52254-52273 Msa1418520:intron 15.0%
!! GAAAGTAAATAAATGTTTAA+AGG - tig0024604:52409-52428 None:intergenic 15.0%
!! AGTTTATTCATAAAATCAAT+GGG + tig0024604:52461-52480 Msa1418520:intron 15.0%
!! TTATAAATTAACTGATACAA+AGG - tig0024604:53428-53447 None:intergenic 15.0%
!!! TTGATAAGCTATTATTATTT+TGG + tig0024604:53792-53811 Msa1418520:three_prime_UTR 15.0%
!!! TGATAAGCTATTATTATTTT+GGG + tig0024604:53793-53812 Msa1418520:three_prime_UTR 15.0%
!!! TTAACTGTTTCTTGTTAATT+TGG + tig0024604:49957-49976 Msa1418520:intron 20.0%
!! TCTAATAAGTCATTCTATAT+AGG - tig0024604:50452-50471 None:intergenic 20.0%
!! ATGATATGAATAATGAATCT+CGG - tig0024604:50481-50500 None:intergenic 20.0%
!! AATAGATACAACTATAAACA+AGG - tig0024604:50566-50585 None:intergenic 20.0%
!! ATAAATACATAAAAATGGGT+TGG - tig0024604:50600-50619 None:intergenic 20.0%
!! ATAAAATTGACCAGTAAAAA+AGG - tig0024604:51771-51790 None:intergenic 20.0%
!! AATAAATGTTTAAAGGGAAA+CGG - tig0024604:52402-52421 None:intergenic 20.0%
!! GAGTTTATTCATAAAATCAA+TGG + tig0024604:52460-52479 Msa1418520:intron 20.0%
!! TCATATGCATAATTTAAACA+CGG + tig0024604:53291-53310 Msa1418520:intron 20.0%
!!! ACTTGTTTTCTATTTTTTCT+TGG + tig0024604:53359-53378 Msa1418520:intron 20.0%
!!! GATAAGCTATTATTATTTTG+GGG + tig0024604:53794-53813 Msa1418520:three_prime_UTR 20.0%
! ATCATCTATGTGTTGTAATT+TGG + tig0024604:50008-50027 Msa1418520:intron 25.0%
! ATGTTCCTTTCTCAAATTAT+CGG - tig0024604:50146-50165 None:intergenic 25.0%
!! TTTTAACGGCATATTAATGT+TGG + tig0024604:50619-50638 Msa1418520:intron 25.0%
! TTTAACGGCATATTAATGTT+GGG + tig0024604:50620-50639 Msa1418520:intron 25.0%
!!! TTTGTTTCTTGATTTTTCAG+CGG + tig0024604:50863-50882 Msa1418520:intron 25.0%
! AATGATAAACAAGTCTATGT+TGG + tig0024604:51182-51201 Msa1418520:CDS 25.0%
! ATGATAAACAAGTCTATGTT+GGG + tig0024604:51183-51202 Msa1418520:CDS 25.0%
!! AAAGATCTATTTTCTGAGTT+TGG + tig0024604:51620-51639 Msa1418520:CDS 25.0%
! AATAAATATATGCAGAGAGA+CGG - tig0024604:51690-51709 None:intergenic 25.0%
! GTATATAATGCACACAAAAA+AGG - tig0024604:51738-51757 None:intergenic 25.0%
! ATAAATGTTTAAAGGGAAAC+GGG - tig0024604:52401-52420 None:intergenic 25.0%
! TTATTCATAAAATCAATGGG+TGG + tig0024604:52464-52483 Msa1418520:intron 25.0%
!!! TAACAAGTTATTTTCTCTGT+AGG + tig0024604:52489-52508 Msa1418520:intron 25.0%
! TGATATGGCATAACAAAATT+CGG - tig0024604:52712-52731 None:intergenic 25.0%
!!! CATTTGGTATTTTTACATGT+AGG + tig0024604:53101-53120 Msa1418520:intron 25.0%
! ATTGTTTCCTTAGAGTAAAT+TGG + tig0024604:53132-53151 Msa1418520:intron 25.0%
! ATTAAAGGGTTAAAATTGTG+AGG - tig0024604:53184-53203 None:intergenic 25.0%
!! GTGTGAGAAATGTAATTTTT+CGG + tig0024604:53455-53474 Msa1418520:intron 25.0%
! AATTGAAATTATCAGATGCT+CGG + tig0024604:53486-53505 Msa1418520:intron 25.0%
! TTCAATAAGATGAATCACTT+CGG - tig0024604:53598-53617 None:intergenic 25.0%
!! ATTTTTGCCAGATAAGTTAT+TGG + tig0024604:53852-53871 Msa1418520:three_prime_UTR 25.0%
! CTAGAAGCTAAAAATGAAAA+TGG - tig0024604:53931-53950 None:intergenic 25.0%
ATTGTACAAAGCTAAGTGTT+GGG + tig0024604:50404-50423 Msa1418520:intron 30.0%
AATCCAGATGAACAATTGTA+AGG + tig0024604:50523-50542 Msa1418520:intron 30.0%
ATGAACAATTGTAAGGATGA+AGG + tig0024604:50530-50549 Msa1418520:intron 30.0%
TTAACGGCATATTAATGTTG+GGG + tig0024604:50621-50640 Msa1418520:intron 30.0%
!! ATATTAATGTTGGGGGTATT+AGG + tig0024604:50629-50648 Msa1418520:intron 30.0%
! AAATTTGTGCACAGATTTTG+TGG - tig0024604:50707-50726 None:intergenic 30.0%
! ACTGTTGTTATCATAGGTTT+TGG + tig0024604:50793-50812 Msa1418520:intron 30.0%
TGAGAAAACATGATACGAAT+AGG - tig0024604:50933-50952 None:intergenic 30.0%
ACATACACATTAGTGAACTT+GGG - tig0024604:51251-51270 None:intergenic 30.0%
!!! TGATGACAAGGTTTTATTTG+TGG + tig0024604:51457-51476 Msa1418520:CDS 30.0%
!!! GATGACAAGGTTTTATTTGT+GGG + tig0024604:51458-51477 Msa1418520:CDS 30.0%
!!! ATGACAAGGTTTTATTTGTG+GGG + tig0024604:51459-51478 Msa1418520:CDS 30.0%
AACAGATATGAGAAATTGCA+AGG + tig0024604:51545-51564 Msa1418520:CDS 30.0%
ACAGATATGAGAAATTGCAA+GGG + tig0024604:51546-51565 Msa1418520:CDS 30.0%
! AATCGTCATCAAGATTTTTC+AGG - tig0024604:51583-51602 None:intergenic 30.0%
!!! TTCCAACATACCTTTTTTAC+TGG + tig0024604:51758-51777 Msa1418520:intron 30.0%
TTCCATTCATTTCATTCAAC+TGG - tig0024604:51991-52010 None:intergenic 30.0%
GAATGAAATGAATGGAAAGT+TGG + tig0024604:51994-52013 Msa1418520:CDS 30.0%
TTCATTATTAAGTAGCTGAC+TGG + tig0024604:52131-52150 Msa1418520:intron 30.0%
TGGCTATAGCTTATAATTAG+TGG + tig0024604:52151-52170 Msa1418520:intron 30.0%
!! TCTAAGTTTTATCAACCATG+AGG - tig0024604:52373-52392 None:intergenic 30.0%
ATTTACTTTCACAGTTCTCA+TGG + tig0024604:52419-52438 Msa1418520:intron 30.0%
TGGTATGTATAAGTTGCATT+TGG + tig0024604:53085-53104 Msa1418520:intron 30.0%
CAGAATACCAATTTACTCTA+AGG - tig0024604:53142-53161 None:intergenic 30.0%
TTTAAACACGGATCAAATTG+AGG + tig0024604:53303-53322 Msa1418520:intron 30.0%
TTGAGGTACATTACTAACTA+AGG + tig0024604:53320-53339 Msa1418520:intron 30.0%
GAGCATCTGATAATTTCAAT+TGG - tig0024604:53487-53506 None:intergenic 30.0%
!!! CTCAGAGACCTTTATTTTTA+GGG - tig0024604:53631-53650 None:intergenic 30.0%
TTGTTTCAATTAGGGTCTGT+AGG + tig0024604:49815-49834 Msa1418520:CDS 35.0%
TGTTTCAATTAGGGTCTGTA+GGG + tig0024604:49816-49835 Msa1418520:CDS 35.0%
ATTGTGATCATGTGTCATGT+TGG + tig0024604:50171-50190 Msa1418520:intron 35.0%
TGTTGGACACTAACATGTAT+CGG + tig0024604:50188-50207 Msa1418520:intron 35.0%
! ATTTGTGTCGATGTTATGTC+CGG - tig0024604:50221-50240 None:intergenic 35.0%
GTAATCACAAGTGTCAGTAT+CGG + tig0024604:50282-50301 Msa1418520:intron 35.0%
! ACGTCTTCAATAAGAAGTGT+CGG + tig0024604:50331-50350 Msa1418520:intron 35.0%
! AAGAATCTTTGTAGCATCGA+AGG - tig0024604:50380-50399 None:intergenic 35.0%
CATTGTACAAAGCTAAGTGT+TGG + tig0024604:50403-50422 Msa1418520:intron 35.0%
CATCCTTACAATTGTTCATC+TGG - tig0024604:50529-50548 None:intergenic 35.0%
TAACGGCATATTAATGTTGG+GGG + tig0024604:50622-50641 Msa1418520:intron 35.0%
CAATGTGTTCATTAAGAACC+TGG + tig0024604:50986-51005 Msa1418520:CDS 35.0%
ACAGTAATGGTCAGTCAAAA+GGG + tig0024604:51087-51106 Msa1418520:CDS 35.0%
CACATACACATTAGTGAACT+TGG - tig0024604:51252-51271 None:intergenic 35.0%
! GAGGACTTGAAACAACTTTT+TGG + tig0024604:51299-51318 Msa1418520:CDS 35.0%
ACAGTCATGAAAGATGCAAA+TGG + tig0024604:51347-51366 Msa1418520:CDS 35.0%
CAGTCATGAAAGATGCAAAT+GGG + tig0024604:51348-51367 Msa1418520:CDS 35.0%
AATGGGAAATCTAGATGCTT+TGG + tig0024604:51365-51384 Msa1418520:CDS 35.0%
AACTGCTATCAATGATGACA+AGG + tig0024604:51445-51464 Msa1418520:CDS 35.0%
CAGATATGAGAAATTGCAAG+GGG + tig0024604:51547-51566 Msa1418520:CDS 35.0%
! GACCAGTAAAAAAGGTATGT+TGG - tig0024604:51763-51782 None:intergenic 35.0%
GTTGCATTATTAGGTGATGT+TGG + tig0024604:51820-51839 Msa1418520:intron 35.0%
GTCCAGTTGAATGAAATGAA+TGG + tig0024604:51986-52005 Msa1418520:intron 35.0%
TGAAATGAATGGAAAGTTGG+TGG + tig0024604:51997-52016 Msa1418520:CDS 35.0%
! GAAATGAATGGAAAGTTGGT+GGG + tig0024604:51998-52017 Msa1418520:CDS 35.0%
CATTCCTTTATGAATCCTCA+TGG + tig0024604:52355-52374 Msa1418520:intron 35.0%
TCAACCATGAGGATTCATAA+AGG - tig0024604:52362-52381 None:intergenic 35.0%
CATATATCTATACCCTTGGT+TGG - tig0024604:52911-52930 None:intergenic 35.0%
! CAACCAAGGGTATAGATATA+TGG + tig0024604:52909-52928 Msa1418520:CDS 35.0%
TATATGGCCAACAATCGAAA+TGG + tig0024604:52925-52944 Msa1418520:CDS 35.0%
!! GTTACTCCTTTTGCCATTTA+TGG + tig0024604:53225-53244 Msa1418520:intron 35.0%
!! TCCTTTTGCCATTTATGGTA+GGG + tig0024604:53230-53249 Msa1418520:intron 35.0%
TAAGATGAATCACTTCGGAT+TGG - tig0024604:53593-53612 None:intergenic 35.0%
!!! ACCTTTATTTTTAGGGCATC+GGG - tig0024604:53624-53643 None:intergenic 35.0%
!!! GACCTTTATTTTTAGGGCAT+CGG - tig0024604:53625-53644 None:intergenic 35.0%
!!! CCTCAGAGACCTTTATTTTT+AGG - tig0024604:53632-53651 None:intergenic 35.0%
CCTAAAAATAAAGGTCTCTG+AGG + tig0024604:53629-53648 Msa1418520:CDS 35.0%
TTTGCCAGATAAGTTATTGG+TGG + tig0024604:53855-53874 Msa1418520:three_prime_UTR 35.0%
TTGCCAGATAAGTTATTGGT+GGG + tig0024604:53856-53875 Msa1418520:three_prime_UTR 35.0%
! AGAGATTCAAGGACATGTTT+TGG + tig0024604:53888-53907 Msa1418520:three_prime_UTR 35.0%
TCAATTGAGATTCTTCGTAG+AGG + tig0024604:53970-53989 Msa1418520:three_prime_UTR 35.0%
TAAAGTGACGCATTCACGAA+CGG - tig0024604:49727-49746 None:intergenic 40.0%
! TCGCTCAGGTTGTTTCAATT+AGG + tig0024604:49806-49825 Msa1418520:CDS 40.0%
! CGCTCAGGTTGTTTCAATTA+GGG + tig0024604:49807-49826 Msa1418520:CDS 40.0%
CCTTTCTCAAATTATCGGTG+TGG - tig0024604:50141-50160 None:intergenic 40.0%
CCACACCGATAATTTGAGAA+AGG + tig0024604:50138-50157 Msa1418520:intron 40.0%
ATACTACACATGTCAGACAC+CGG + tig0024604:50305-50324 Msa1418520:intron 40.0%
TTCTTATTGAAGACGTGTCC+CGG - tig0024604:50327-50346 None:intergenic 40.0%
!! TAATGTTGGGGGTATTAGGT+TGG + tig0024604:50633-50652 Msa1418520:intron 40.0%
!! GGATGGACTGTTGTTATCAT+AGG + tig0024604:50787-50806 Msa1418520:intron 40.0%
GTTGAGAAGTTCCTTTGCAT+TGG - tig0024604:50889-50908 None:intergenic 40.0%
TCAACTTCACTCCTCTGAAT+GGG + tig0024604:50904-50923 Msa1418520:CDS 40.0%
AAGTGTTCGGAAAAGTGGAT+CGG + tig0024604:50962-50981 Msa1418520:CDS 40.0%
TGTGATCAATTGATGTGTCC+AGG - tig0024604:51007-51026 None:intergenic 40.0%
GGACACATCAATTGATCACA+AGG + tig0024604:51007-51026 Msa1418520:CDS 40.0%
! CCACCTTACAAGAAAGTACA+GGG - tig0024604:51061-51080 None:intergenic 40.0%
GACAGTAATGGTCAGTCAAA+AGG + tig0024604:51086-51105 Msa1418520:CDS 40.0%
AATGGTCAGTCAAAAGGGTA+TGG + tig0024604:51092-51111 Msa1418520:CDS 40.0%
!! AAAGAGTGCCATCAAACAGT+TGG + tig0024604:51145-51164 Msa1418520:CDS 40.0%
!! TTCTGAAGCATCAACTGATG+AGG + tig0024604:51280-51299 Msa1418520:CDS 40.0%
!! AAACAACTTTTTGGCCCCTT+TGG + tig0024604:51308-51327 Msa1418520:CDS 40.0%
CACTAGTTATCTTGCCAAAG+GGG - tig0024604:51325-51344 None:intergenic 40.0%
GCACTAGTTATCTTGCCAAA+GGG - tig0024604:51326-51345 None:intergenic 40.0%
TGCACTAGTTATCTTGCCAA+AGG - tig0024604:51327-51346 None:intergenic 40.0%
GCTGCAGTTGAGAAGTTAAA+TGG + tig0024604:51422-51441 Msa1418520:CDS 40.0%
!!! ACAAGGTTTTATTTGTGGGG+AGG + tig0024604:51462-51481 Msa1418520:CDS 40.0%
!!! CAAGGTTTTATTTGTGGGGA+GGG + tig0024604:51463-51482 Msa1418520:CDS 40.0%
AATTCTTTCCTGCTCGAACT+TGG - tig0024604:51525-51544 None:intergenic 40.0%
TTGGAACTGTAACATCTTGC+AGG + tig0024604:51639-51658 Msa1418520:CDS 40.0%
TGGAACTGTAACATCTTGCA+GGG + tig0024604:51640-51659 Msa1418520:CDS 40.0%
TAGGTGATGTTGGATTCACA+TGG + tig0024604:51830-51849 Msa1418520:intron 40.0%
!! TACCGCTTTATTTGCTTCCT+CGG - tig0024604:51894-51913 None:intergenic 40.0%
GGTAAGTATTCAAAGAAGCG+TGG + tig0024604:51910-51929 Msa1418520:intron 40.0%
! AAAGCCTTTGTTTGTTGCTG+TGG + tig0024604:52024-52043 Msa1418520:CDS 40.0%
ACTTTCACAGTTCTCATGGT+CGG + tig0024604:52423-52442 Msa1418520:intron 40.0%
TCCAAAGACAGGGTCAAAAT+GGG + tig0024604:52734-52753 Msa1418520:CDS 40.0%
TGGCCATATATCTATACCCT+TGG - tig0024604:52915-52934 None:intergenic 40.0%
! ATCCATGCCATTTCGATTGT+TGG - tig0024604:52935-52954 None:intergenic 40.0%
TCAAATGTCATCGGCAACAT+TGG - tig0024604:52967-52986 None:intergenic 40.0%
ATGTTGCCGATGACATTTGA+TGG + tig0024604:52967-52986 Msa1418520:CDS 40.0%
CCAGAACCATCAAATGTCAT+CGG - tig0024604:52976-52995 None:intergenic 40.0%
! CTATTGATAATCAGCGTCCA+GGG + tig0024604:53010-53029 Msa1418520:CDS 40.0%
!! CTCCTTTTGCCATTTATGGT+AGG + tig0024604:53229-53248 Msa1418520:intron 40.0%
ACCCTACCATAAATGGCAAA+AGG - tig0024604:53234-53253 None:intergenic 40.0%
ATGCTAGACCCTACCATAAA+TGG - tig0024604:53241-53260 None:intergenic 40.0%
TGAACATCTATATCCCCTTG+TGG + tig0024604:53509-53528 Msa1418520:CDS 40.0%
ACCAAACCAACATACTGCAA+AGG + tig0024604:53542-53561 Msa1418520:CDS 40.0%
! ACCTTTGCAGTATGTTGGTT+TGG - tig0024604:53546-53565 None:intergenic 40.0%
AACATACTGCAAAGGTGACA+GGG + tig0024604:53550-53569 Msa1418520:CDS 40.0%
TCCCGATGCCCTAAAAATAA+AGG + tig0024604:53620-53639 Msa1418520:CDS 40.0%
TGAAGTAATTTCAGCTGCAG+TGG + tig0024604:53726-53745 Msa1418520:exon 40.0%
GCTTATCAAGCACAAAAACG+CGG - tig0024604:53781-53800 None:intergenic 40.0%
GGCTGATATGTAGAGATTCA+AGG + tig0024604:53877-53896 Msa1418520:three_prime_UTR 40.0%
ACATTCGGAGACTGAACCAT+CGG - tig0024604:49670-49689 None:intergenic 45.0%
! GTGAATGCGTCACTTTACGT+TGG + tig0024604:49730-49749 Msa1418520:CDS 45.0%
TTTACGTTGGCGATCTCGAA+GGG + tig0024604:49743-49762 Msa1418520:CDS 45.0%
TTGAAACAACCTGAGCGACT+TGG - tig0024604:49804-49823 None:intergenic 45.0%
GACATAAGCGTAACCAAGAG+AGG - tig0024604:49857-49876 None:intergenic 45.0%
TGTCAACTTCACCAATGCTC+AGG + tig0024604:49873-49892 Msa1418520:CDS 45.0%
AACTTCACCAATGCTCAGGA+TGG + tig0024604:49877-49896 Msa1418520:CDS 45.0%
AAACTCACCATCCTGAGCAT+TGG - tig0024604:49887-49906 None:intergenic 45.0%
AACATGTATCGGACAGACAC+CGG + tig0024604:50199-50218 Msa1418520:intron 45.0%
TACTACACATGTCAGACACC+GGG + tig0024604:50306-50325 Msa1418520:intron 45.0%
!! TTTTTCAGCGGCCAATGCAA+AGG + tig0024604:50875-50894 Msa1418520:intron 45.0%
CTCAACTTCACTCCTCTGAA+TGG + tig0024604:50903-50922 Msa1418520:CDS 45.0%
CGAATAGGTTTCCCATTCAG+AGG - tig0024604:50918-50937 None:intergenic 45.0%
CTCAACGTGATCCAAGTGTT+CGG + tig0024604:50949-50968 Msa1418520:CDS 45.0%
GATCCAAGTGTTCGGAAAAG+TGG + tig0024604:50957-50976 Msa1418520:CDS 45.0%
!! GATCCACTTTTCCGAACACT+TGG - tig0024604:50963-50982 None:intergenic 45.0%
AGTGTTCGGAAAAGTGGATC+GGG + tig0024604:50963-50982 Msa1418520:CDS 45.0%
! CATGACACTTTTGCTGCGTT+TGG + tig0024604:51035-51054 Msa1418520:CDS 45.0%
TGGCCCTGTACTTTCTTGTA+AGG + tig0024604:51055-51074 Msa1418520:CDS 45.0%
CCCTGTACTTTCTTGTAAGG+TGG + tig0024604:51058-51077 Msa1418520:CDS 45.0%
! GCCACCTTACAAGAAAGTAC+AGG - tig0024604:51062-51081 None:intergenic 45.0%
AAGGTGGCTCTTGACAGTAA+TGG + tig0024604:51074-51093 Msa1418520:CDS 45.0%
AGTGCCATCAAACAGTTGGA+TGG + tig0024604:51149-51168 Msa1418520:CDS 45.0%
CATGCCATCCAACTGTTTGA+TGG - tig0024604:51156-51175 None:intergenic 45.0%
! TTTTTGTTCGCCACCAGGAA+AGG + tig0024604:51207-51226 Msa1418520:CDS 45.0%
! TTTTGTTCGCCACCAGGAAA+GGG + tig0024604:51208-51227 Msa1418520:CDS 45.0%
CATTTGTCCTAACCCTTTCC+TGG - tig0024604:51223-51242 None:intergenic 45.0%
CAGGAAAGGGTTAGGACAAA+TGG + tig0024604:51221-51240 Msa1418520:CDS 45.0%
GATTCACATGGTCACAGCAA+GGG + tig0024604:51842-51861 Msa1418520:CDS 45.0%
TCCCGAGGAAGCAAATAAAG+CGG + tig0024604:51889-51908 Msa1418520:CDS 45.0%
!! ACCGCTTTATTTGCTTCCTC+GGG - tig0024604:51893-51912 None:intergenic 45.0%
TGAGCCACAGCAACAAACAA+AGG - tig0024604:52031-52050 None:intergenic 45.0%
! ATGGTCGGTTGACTGTGTTT+TGG + tig0024604:52438-52457 Msa1418520:intron 45.0%
ACCGTAATACAACTGCTGAG+GGG - tig0024604:52602-52621 None:intergenic 45.0%
GACCGTAATACAACTGCTGA+GGG - tig0024604:52603-52622 None:intergenic 45.0%
TGACCGTAATACAACTGCTG+AGG - tig0024604:52604-52623 None:intergenic 45.0%
CAGCAGTTGTATTACGGTCA+AGG + tig0024604:52604-52623 Msa1418520:CDS 45.0%
ACAAAATTCGGAGCAACACC+AGG - tig0024604:52700-52719 None:intergenic 45.0%
CCATATCAGCTCCAAAGACA+GGG + tig0024604:52724-52743 Msa1418520:CDS 45.0%
CTCCAAAGACAGGGTCAAAA+TGG + tig0024604:52733-52752 Msa1418520:CDS 45.0%
CTTGATTCTGCTGCACATGT+TGG - tig0024604:52792-52811 None:intergenic 45.0%
TTGCATCGTAACTCCAACCA+AGG + tig0024604:52895-52914 Msa1418520:CDS 45.0%
TGCATCGTAACTCCAACCAA+GGG + tig0024604:52896-52915 Msa1418520:CDS 45.0%
! CCGATGACATTTGATGGTTC+TGG + tig0024604:52973-52992 Msa1418520:CDS 45.0%
! CCTGGACGCTGATTATCAAT+AGG - tig0024604:53012-53031 None:intergenic 45.0%
! CCTATTGATAATCAGCGTCC+AGG + tig0024604:53009-53028 Msa1418520:CDS 45.0%
!! ATACCATGCGCTGATTGTCT+GGG - tig0024604:53071-53090 None:intergenic 45.0%
TGGTGTAAGACAGTCCACAA+GGG - tig0024604:53526-53545 None:intergenic 45.0%
TTGGTGTAAGACAGTCCACA+AGG - tig0024604:53527-53546 None:intergenic 45.0%
CTGTCACCTTTGCAGTATGT+TGG - tig0024604:53551-53570 None:intergenic 45.0%
CAACATACTGCAAAGGTGAC+AGG + tig0024604:53549-53568 Msa1418520:CDS 45.0%
! GACAGGGATGTTGCTTGAAA+TGG + tig0024604:53566-53585 Msa1418520:CDS 45.0%
!! TCTGAAGTTGGTGATCAGCT+TGG + tig0024604:53684-53703 Msa1418520:CDS 45.0%
CAGCCCACCAATAACTTATC+TGG - tig0024604:53862-53881 None:intergenic 45.0%
!! TAAAATAAATACATAAAAAT+GGG - tig0024604:50604-50623 None:intergenic 5.0%
!! TTAAAATAAATACATAAAAA+TGG - tig0024604:50605-50624 None:intergenic 5.0%
!!! TTTTTATGTATTTATTTTAA+CGG + tig0024604:50605-50624 Msa1418520:intron 5.0%
GATGGTTCAGTCTCCGAATG+TGG + tig0024604:49669-49688 Msa1418520:CDS 50.0%
CTTTACGTTGGCGATCTCGA+AGG + tig0024604:49742-49761 Msa1418520:CDS 50.0%
TCTGTTTAGCCAAGTCGCTC+AGG + tig0024604:49792-49811 Msa1418520:CDS 50.0%
!!! TGGGTTTTTTGTTCGCCACC+AGG + tig0024604:51202-51221 Msa1418520:CDS 50.0%
TTGTCCTAACCCTTTCCTGG+TGG - tig0024604:51220-51239 None:intergenic 50.0%
GTTGAAAGCCAAGTTCGAGC+AGG + tig0024604:51514-51533 Msa1418520:CDS 50.0%
GGATTCACATGGTCACAGCA+AGG + tig0024604:51841-51860 Msa1418520:CDS 50.0%
TGCTTCCTCGGGAGTAGAAA+AGG - tig0024604:51882-51901 None:intergenic 50.0%
TCAGCGCAAAGAAGAGAGGA+AGG + tig0024604:52048-52067 Msa1418520:CDS 50.0%
TTTGCTCAAATCCGTTCCCC+TGG + tig0024604:52517-52536 Msa1418520:CDS 50.0%
GCCCCTCAGCAGTTGTATTA+CGG + tig0024604:52598-52617 Msa1418520:CDS 50.0%
TATTACGGTCAAGGCACACC+TGG + tig0024604:52613-52632 Msa1418520:CDS 50.0%
AAACCAAATCCAGCAGGCTG+AGG - tig0024604:52649-52668 None:intergenic 50.0%
TGCTGGAAACCAAATCCAGC+AGG - tig0024604:52655-52674 None:intergenic 50.0%
AGCAGATCTTGCCTGGAATG+CGG + tig0024604:52674-52693 Msa1418520:CDS 50.0%
GCCATATCAGCTCCAAAGAC+AGG + tig0024604:52723-52742 Msa1418520:CDS 50.0%
!! CCCTGTCTTTGGAGCTGATA+TGG - tig0024604:52727-52746 None:intergenic 50.0%
!! GCCCATTTTGACCCTGTCTT+TGG - tig0024604:52738-52757 None:intergenic 50.0%
GACAGGGTCAAAATGGGCAA+CGG + tig0024604:52740-52759 Msa1418520:CDS 50.0%
GGTCAAAATGGGCAACGGAT+AGG + tig0024604:52745-52764 Msa1418520:CDS 50.0%
GATTCTGCTGCACATGTTGG+AGG - tig0024604:52789-52808 None:intergenic 50.0%
GGCCAACAATCGAAATGGCA+TGG + tig0024604:52930-52949 Msa1418520:CDS 50.0%
CGAAATGGCATGGATCTAGC+AGG + tig0024604:52940-52959 Msa1418520:CDS 50.0%
GGTAGCAGAAGCTAAAGCAG+AGG - tig0024604:53049-53068 None:intergenic 50.0%
!! TACCATGCGCTGATTGTCTG+GGG - tig0024604:53070-53089 None:intergenic 50.0%
!! CATACCATGCGCTGATTGTC+TGG - tig0024604:53072-53091 None:intergenic 50.0%
GGTGTAAGACAGTCCACAAG+GGG - tig0024604:53525-53544 None:intergenic 50.0%
!! AAAGGTCTCTGAGGCATTGC+AGG + tig0024604:53638-53657 Msa1418520:CDS 50.0%
GGTCCTTCATGAAGCTGCAT+CGG + tig0024604:53659-53678 Msa1418520:CDS 50.0%
GTCCTTCATGAAGCTGCATC+GGG + tig0024604:53660-53679 Msa1418520:CDS 50.0%
ATCCCGATGCAGCTTCATGA+AGG - tig0024604:53665-53684 None:intergenic 50.0%
GGCTGCGATTTCATCACCGA+TGG + tig0024604:49651-49670 Msa1418520:CDS 55.0%
GGTTCAGTCTCCGAATGTGG+TGG + tig0024604:49672-49691 Msa1418520:CDS 55.0%
! CTCGAAGGGAGTGTGAACGA+AGG + tig0024604:49757-49776 Msa1418520:CDS 55.0%
GGGTCTGTAGGGATCAGACT+AGG + tig0024604:49827-49846 Msa1418520:CDS 55.0%
CAGACTAGGCGATCCTCTCT+TGG + tig0024604:49841-49860 Msa1418520:CDS 55.0%
TTCGCCACCAGGAAAGGGTT+AGG + tig0024604:51213-51232 Msa1418520:CDS 55.0%
ACTGCAGCAGCAGCTGAATC+TGG - tig0024604:51410-51429 None:intergenic 55.0%
TATTTGTGGGGAGGGCTCAG+AGG + tig0024604:51471-51490 Msa1418520:CDS 55.0%
CATGGTCACAGCAAGGGTTC+TGG + tig0024604:51848-51867 Msa1418520:CDS 55.0%
!! CAGCAAGGGTTCTGGTTTCG+TGG + tig0024604:51856-51875 Msa1418520:CDS 55.0%
TGGCTCAGCGCAAAGAAGAG+AGG + tig0024604:52044-52063 Msa1418520:CDS 55.0%
AGAGAGGAAGGCTCAGTTGC+AGG + tig0024604:52060-52079 Msa1418520:CDS 55.0%
AATCCGTTCCCCTGGTGGAA+TGG + tig0024604:52525-52544 Msa1418520:CDS 55.0%
AACTGCTGAGGGGCAAGTCT+TGG - tig0024604:52592-52611 None:intergenic 55.0%
TTCATACCACCTCAGCCTGC+TGG + tig0024604:52637-52656 Msa1418520:CDS 55.0%
TTCCAGCAGCAGATCTTGCC+TGG + tig0024604:52667-52686 Msa1418520:CDS 55.0%
TTCCAGGCAAGATCTGCTGC+TGG - tig0024604:52672-52691 None:intergenic 55.0%
CGGATAGGTGCTCGACGAAA+TGG + tig0024604:52760-52779 Msa1418520:CDS 55.0%
GAGGCAAGTGATGTAGACCC+TGG - tig0024604:53030-53049 None:intergenic 55.0%
TACCCCAGACAATCAGCGCA+TGG + tig0024604:53065-53084 Msa1418520:CDS 55.0%
! GCTGCATCGGGATCTGAAGT+TGG + tig0024604:53672-53691 Msa1418520:CDS 55.0%
GTCTCCGAATGTGGTGGCTC+CGG + tig0024604:49678-49697 Msa1418520:CDS 60.0%
CGCATTCACGAACGGTCCTC+CGG - tig0024604:49719-49738 None:intergenic 60.0%
! CGTGGCCTTTTCTACTCCCG+AGG + tig0024604:51874-51893 Msa1418520:CDS 60.0%
GCTCAAATCCGTTCCCCTGG+TGG + tig0024604:52520-52539 Msa1418520:CDS 60.0%
! GTGCCATTCCACCAGGGGAA+CGG - tig0024604:52531-52550 None:intergenic 60.0%
GGCTTCCTGGGTACCATCCA+GGG + tig0024604:52563-52582 Msa1418520:CDS 60.0%
GCTTCCTGGGTACCATCCAG+GGG + tig0024604:52564-52583 Msa1418520:CDS 60.0%
!! CAAGTCTTGGTGCCCCTGGA+TGG - tig0024604:52579-52598 None:intergenic 60.0%
GGCTGAGGTGGTATGAAGCC+AGG - tig0024604:52634-52653 None:intergenic 60.0%
CCAAATCCAGCAGGCTGAGG+TGG - tig0024604:52646-52665 None:intergenic 60.0%
CCACCTCAGCCTGCTGGATT+TGG + tig0024604:52643-52662 Msa1418520:CDS 60.0%
ATCTTGCCTGGAATGCGGCC+TGG + tig0024604:52679-52698 Msa1418520:CDS 60.0%
GTCGCCGGAGCCACCACATT+CGG - tig0024604:49685-49704 None:intergenic 65.0%
GAATGTGGTGGCTCCGGCGA+CGG + tig0024604:49684-49703 Msa1418520:CDS 65.0%
!! CAGCGGTGCCATTCCACCAG+GGG - tig0024604:52536-52555 None:intergenic 65.0%
!! CCAGCGGTGCCATTCCACCA+GGG - tig0024604:52537-52556 None:intergenic 65.0%
! GAATGGCACCGCTGGCTGCA+GGG + tig0024604:52542-52561 Msa1418520:CDS 65.0%
GGGCTTCCTGGGTACCATCC+AGG + tig0024604:52562-52581 Msa1418520:CDS 65.0%
GCAACACCAGGCCGCATTCC+AGG - tig0024604:52688-52707 None:intergenic 65.0%
CCGGTCAATGCTGCCGTCGC+CGG - tig0024604:49700-49719 None:intergenic 70.0%
!! CCGGCGACGGCAGCATTGAC+CGG + tig0024604:49697-49716 Msa1418520:CDS 70.0%
!! GCGACGGCAGCATTGACCGG+AGG + tig0024604:49700-49719 Msa1418520:CDS 70.0%
CCCTGGTGGAATGGCACCGC+TGG + tig0024604:52534-52553 Msa1418520:CDS 70.0%
!! GCCAGCGGTGCCATTCCACC+AGG - tig0024604:52538-52557 None:intergenic 70.0%
! GGAATGGCACCGCTGGCTGC+AGG + tig0024604:52541-52560 Msa1418520:CDS 70.0%
CCAGGAAGCCCTGCAGCCAG+CGG - tig0024604:52553-52572 None:intergenic 70.0%
! CGCTGGCTGCAGGGCTTCCT+GGG + tig0024604:52551-52570 Msa1418520:CDS 70.0%
GGTGCCCCTGGATGGTACCC+AGG - tig0024604:52571-52590 None:intergenic 70.0%
!! GGGGCAAGTCTTGGTGCCCC+TGG - tig0024604:52583-52602 None:intergenic 70.0%
! CCGCTGGCTGCAGGGCTTCC+TGG + tig0024604:52550-52569 Msa1418520:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0024604 gene 49649 54037 49649 ID=Msa1418520;Name=Msa1418520
tig0024604 mRNA 49649 54037 49649 ID=Msa1418520-mRNA-1;Parent=Msa1418520;Name=Msa1418520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.71|1|1|1|7|309|639
tig0024604 exon 49649 49898 49649 ID=Msa1418520-mRNA-1:exon:381;Parent=Msa1418520-mRNA-1
tig0024604 exon 50883 51661 50883 ID=Msa1418520-mRNA-1:exon:382;Parent=Msa1418520-mRNA-1
tig0024604 exon 51833 51910 51833 ID=Msa1418520-mRNA-1:exon:383;Parent=Msa1418520-mRNA-1
tig0024604 exon 51992 52081 51992 ID=Msa1418520-mRNA-1:exon:384;Parent=Msa1418520-mRNA-1
tig0024604 exon 52511 52810 52511 ID=Msa1418520-mRNA-1:exon:385;Parent=Msa1418520-mRNA-1
tig0024604 exon 52892 53086 52892 ID=Msa1418520-mRNA-1:exon:386;Parent=Msa1418520-mRNA-1
tig0024604 exon 53501 54037 53501 ID=Msa1418520-mRNA-1:exon:387;Parent=Msa1418520-mRNA-1
tig0024604 CDS 49649 49898 49649 ID=Msa1418520-mRNA-1:cds;Parent=Msa1418520-mRNA-1
tig0024604 CDS 50883 51661 50883 ID=Msa1418520-mRNA-1:cds;Parent=Msa1418520-mRNA-1
tig0024604 CDS 51833 51910 51833 ID=Msa1418520-mRNA-1:cds;Parent=Msa1418520-mRNA-1
tig0024604 CDS 51992 52081 51992 ID=Msa1418520-mRNA-1:cds;Parent=Msa1418520-mRNA-1
tig0024604 CDS 52511 52810 52511 ID=Msa1418520-mRNA-1:cds;Parent=Msa1418520-mRNA-1
tig0024604 CDS 52892 53086 52892 ID=Msa1418520-mRNA-1:cds;Parent=Msa1418520-mRNA-1
tig0024604 CDS 53501 53728 53501 ID=Msa1418520-mRNA-1:cds;Parent=Msa1418520-mRNA-1
tig0024604 three_prime_UTR 53729 54037 53729 ID=Msa1418520-mRNA-1:three_prime_utr;Parent=Msa1418520-mRNA-1
Gene Sequence

>Msa1418520

ATGGCTGCGATTTCATCACCGATGGTTCAGTCTCCGAATGTGGTGGCTCCGGCGACGGCAGCATTGACCGGAGGACCGTTCGTGAATGCGTCACTTTACGTTGGCGATCTCGAAGGGAGTGTGAACGAAGGACAACTTTTTGATCTGTTTAGCCAAGTCGCTCAGGTTGTTTCAATTAGGGTCTGTAGGGATCAGACTAGGCGATCCTCTCTTGGTTACGCTTATGTCAACTTCACCAATGCTCAGGATGCGGCCAATGCAAAGGAACTTCTCAACTTCACTCCTCTGAATGGGAAACCTATTCGTATCATGTTTTCTCAACGTGATCCAAGTGTTCGGAAAAGTGGATCGGGCAATGTGTTCATTAAGAACCTGGACACATCAATTGATCACAAGGCGTTGCATGACACTTTTGCTGCGTTTGGCCCTGTACTTTCTTGTAAGGTGGCTCTTGACAGTAATGGTCAGTCAAAAGGGTATGGCTTTGTTCAGTTTGACAATGAAGAAGCTGCAAAGAGTGCCATCAAACAGTTGGATGGCATGTTGATAAATGATAAACAAGTCTATGTTGGGTTTTTTGTTCGCCACCAGGAAAGGGTTAGGACAAATGGATCGCCCAAGTTCACTAATGTGTATGTGAAAAATCTTTCTGAAGCATCAACTGATGAGGACTTGAAACAACTTTTTGGCCCCTTTGGCAAGATAACTAGTGCAACAGTCATGAAAGATGCAAATGGGAAATCTAGATGCTTTGGTTTTGTGAATTTTCAAAGTCCAGATTCAGCTGCTGCTGCAGTTGAGAAGTTAAATGGAACTGCTATCAATGATGACAAGGTTTTATTTGTGGGGAGGGCTCAGAGGAAAGCAGAAAGAGAGCATGAGTTGAAAGCCAAGTTCGAGCAGGAAAGAATTAACAGATATGAGAAATTGCAAGGGGCTAATTTGTACCTGAAAAATCTTGATGACGATTTTAATGAAGAAAAGTTGAAAGATCTATTTTCTGAGTTTGGAACTGTAACATCTTGCAGGGTGATGTTGGATTCACATGGTCACAGCAAGGGTTCTGGTTTCGTGGCCTTTTCTACTCCCGAGGAAGCAAATAAAGCGTTGAATGAAATGAATGGAAAGTTGGTGGGAAGAAAGCCTTTGTTTGTTGCTGTGGCTCAGCGCAAAGAAGAGAGGAAGGCTCAGTTGCAGGCACATTTTGCTCAAATCCGTTCCCCTGGTGGAATGGCACCGCTGGCTGCAGGGCTTCCTGGGTACCATCCAGGGGCACCAAGACTTGCCCCTCAGCAGTTGTATTACGGTCAAGGCACACCTGGCTTCATACCACCTCAGCCTGCTGGATTTGGTTTCCAGCAGCAGATCTTGCCTGGAATGCGGCCTGGTGTTGCTCCGAATTTTGTTATGCCATATCAGCTCCAAAGACAGGGTCAAAATGGGCAACGGATAGGTGCTCGACGAAATGGAAACCTCCAACATGTGCAGCAGAATCAAATGTTGCATCGTAACTCCAACCAAGGGTATAGATATATGGCCAACAATCGAAATGGCATGGATCTAGCAGGTCCAATGTTGCCGATGACATTTGATGGTTCTGGAGTTTCTGCTGCTCCTATTGATAATCAGCGTCCAGGGTCTACATCACTTGCCTCTGCTTTAGCTTCTGCTACCCCAGACAATCAGCGCATGATGCTCGGTGAACATCTATATCCCCTTGTGGACTGTCTTACACCAAACCAACATACTGCAAAGGTGACAGGGATGTTGCTTGAAATGGACCAATCCGAAGTGATTCATCTTATTGAATCTCCCGATGCCCTAAAAATAAAGGTCTCTGAGGCATTGCAGGTCCTTCATGAAGCTGCATCGGGATCTGAAGTTGGTGATCAGCTTGGTTCATTGTCATTGAACGAATGA
Protein sequence

>Msa1418520

MAAISSPMVQSPNVVAPATAALTGGPFVNASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFTNAQDAANAKELLNFTPLNGKPIRIMFSQRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAFGPVLSCKVALDSNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQVYVGFFVRHQERVRTNGSPKFTNVYVKNLSEASTDEDLKQLFGPFGKITSATVMKDANGKSRCFGFVNFQSPDSAAAAVEKLNGTAINDDKVLFVGRAQRKAEREHELKAKFEQERINRYEKLQGANLYLKNLDDDFNEEKLKDLFSEFGTVTSCRVMLDSHGHSKGSGFVAFSTPEEANKALNEMNGKLVGRKPLFVAVAQRKEERKAQLQAHFAQIRSPGGMAPLAAGLPGYHPGAPRLAPQQLYYGQGTPGFIPPQPAGFGFQQQILPGMRPGVAPNFVMPYQLQRQGQNGQRIGARRNGNLQHVQQNQMLHRNSNQGYRYMANNRNGMDLAGPMLPMTFDGSGVSAAPIDNQRPGSTSLASALASATPDNQRMMLGEHLYPLVDCLTPNQHTAKVTGMLLEMDQSEVIHLIESPDALKIKVSEALQVLHEAASGSEVGDQLGSLSLNE*