Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421110 | sp|Q9M367|BECN1_ARATH | 74.269 | 513 | 125 | 2 | 10 | 515 | 1 | 513 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421110 | A0A396IM07 | 98.453 | 517 | 7 | 1 | 1 | 517 | 1 | 516 | 0.0 | 1069 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa1421110 | 0.812088 | 5.055497e-51 | -8.615850e-47 |
| Msa0064920 | Msa1421110 | 0.804378 | 2.223249e-49 | -8.615850e-47 |
| Msa1421110 | Msa1449520 | 0.800037 | 1.738861e-48 | -8.615850e-47 |
| Msa0791290 | Msa1421110 | 0.883701 | 3.590495e-71 | -8.615850e-47 |
| Msa0377440 | Msa1421110 | 0.804955 | 1.684978e-49 | -8.615850e-47 |
| Msa0446900 | Msa1421110 | 0.808156 | 3.556090e-50 | -8.615850e-47 |
| Msa1077070 | Msa1421110 | 0.812571 | 3.965404e-51 | -8.615850e-47 |
| Msa0311720 | Msa1421110 | 0.805401 | 1.359134e-49 | -8.615850e-47 |
| Msa1122780 | Msa1421110 | 0.819418 | 1.173738e-52 | -8.615850e-47 |
| Msa0491750 | Msa1421110 | 0.947677 | 4.222827e-106 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421110 | MtrunA17_Chr3g0083891 | 98.453 | 517 | 7 | 1 | 1 | 517 | 1 | 516 | 0.0 | 1069 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421110 | AT3G61710.1 | 74.269 | 513 | 125 | 2 | 10 | 515 | 1 | 513 | 0.0 | 780 |
| Msa1421110 | AT3G61710.4 | 74.371 | 437 | 105 | 2 | 10 | 439 | 1 | 437 | 0.0 | 664 |
| Msa1421110 | AT3G61710.2 | 73.901 | 364 | 88 | 2 | 10 | 366 | 1 | 364 | 0.0 | 538 |
| Msa1421110 | AT3G61710.3 | 77.365 | 296 | 60 | 2 | 78 | 366 | 1 | 296 | 6.03e-156 | 447 |
Find 120 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGCATCTTACTGGAATTT+TGG | 0.123213 | tig0024910:-50680 | None:intergenic |
| AATATGTTATGTTCAGTTTC+TGG | 0.132096 | tig0024910:-53310 | None:intergenic |
| GGAGGAGAGAGATGCAATTT+TGG | 0.238592 | tig0024910:+50531 | Msa1421110:intron |
| GACTCTTCCATTGTCTTTCC+AGG | 0.250506 | tig0024910:-48292 | None:intergenic |
| ATTTCTCATGATGGAGAGTT+TGG | 0.268411 | tig0024910:+50625 | Msa1421110:CDS |
| TTGGTCCAGTCAACTTGTTC+TGG | 0.268929 | tig0024910:+52581 | Msa1421110:CDS |
| GCTTTAATAAGCAGGAAAAT+TGG | 0.278141 | tig0024910:+53124 | Msa1421110:CDS |
| GATGAGAGAGACGACGAAAA+AGG | 0.286671 | tig0024910:+46542 | Msa1421110:CDS |
| ATCTAGCCGCTTCAAAGAAT+TGG | 0.303262 | tig0024910:+50069 | Msa1421110:CDS |
| TTTCCTGCTTATTAAAGCTT+TGG | 0.306193 | tig0024910:-53119 | None:intergenic |
| TGTAACAATGCTTACTTATA+AGG | 0.311546 | tig0024910:-52721 | None:intergenic |
| ATTTGAAATGGGCTCTCTAT+TGG | 0.316160 | tig0024910:+53175 | Msa1421110:CDS |
| ACACACTCTGCAATTTGAAA+TGG | 0.321177 | tig0024910:+53163 | Msa1421110:CDS |
| TGTGATGAGCACAACTAAAA+TGG | 0.323097 | tig0024910:+48189 | Msa1421110:CDS |
| TTCCTGCTTATTAAAGCTTT+GGG | 0.325626 | tig0024910:-53118 | None:intergenic |
| AACTCTCCATCATGAGAAAT+AGG | 0.329432 | tig0024910:-50622 | None:intergenic |
| TCAGTTTCTGGATTCAGATT+TGG | 0.333866 | tig0024910:-53298 | None:intergenic |
| TTCAACGATCCTTCTCGTTC+TGG | 0.342444 | tig0024910:+46672 | Msa1421110:CDS |
| TGGGCTCTCTATTGGTTTGT+TGG | 0.349881 | tig0024910:+53183 | Msa1421110:CDS |
| TGAGCCTGAGGTCTTTGCTT+TGG | 0.359710 | tig0024910:-48232 | None:intergenic |
| CGCAATCCACTTTGCATCGT+TGG | 0.360309 | tig0024910:+46624 | Msa1421110:CDS |
| TTTGAAACATTTAGGTAGAA+TGG | 0.363731 | tig0024910:+51367 | Msa1421110:intron |
| GAAACTTCGGTCGGAAATAC+TGG | 0.365381 | tig0024910:-51443 | None:intergenic |
| TAGCTTATGTCCTTTGTATT+CGG | 0.366065 | tig0024910:+53440 | Msa1421110:three_prime_UTR |
| AACTGAACATAACATATTCT+AGG | 0.374123 | tig0024910:+53315 | Msa1421110:exon |
| TAGAACTATTTAGTTGTTAA+CGG | 0.374348 | tig0024910:+53362 | Msa1421110:three_prime_UTR |
| TGGCTTCAGTACCACGCTTC+GGG | 0.374741 | tig0024910:-53278 | None:intergenic |
| AAGAGGTCGAAGATGTAAAC+AGG | 0.379545 | tig0024910:+48707 | Msa1421110:CDS |
| CGCAGAATTTGCCAAGACTA+AGG | 0.388205 | tig0024910:+52657 | Msa1421110:CDS |
| GTTTCAATTGATTTCACATC+AGG | 0.393088 | tig0024910:+50334 | Msa1421110:CDS |
| AGCCTCGCTGAGGACATCTT+TGG | 0.404226 | tig0024910:-48776 | None:intergenic |
| TTGAAACATTTAGGTAGAAT+GGG | 0.417297 | tig0024910:+51368 | Msa1421110:intron |
| CGCATGCAGTCAAGGCATAA+AGG | 0.417474 | tig0024910:-48661 | None:intergenic |
| CTTATTAAAGCTTTGGGTGA+TGG | 0.421070 | tig0024910:-53112 | None:intergenic |
| TGCTTGTGAAACTTCAATCT+TGG | 0.428703 | tig0024910:-50554 | None:intergenic |
| CACACTCTGCAATTTGAAAT+GGG | 0.430612 | tig0024910:+53164 | Msa1421110:CDS |
| TTGGCTTCAGTACCACGCTT+CGG | 0.435431 | tig0024910:-53279 | None:intergenic |
| GTCTGATAAGCTTGATAAAG+AGG | 0.439310 | tig0024910:+48690 | Msa1421110:CDS |
| AATCTGCTTCTGATGGAGGC+GGG | 0.441391 | tig0024910:+48338 | Msa1421110:CDS |
| GGGTCGGAATCGGAGCTTAC+CGG | 0.447487 | tig0024910:+46563 | Msa1421110:CDS |
| CAAACCCATCGAGGGACGTT+CGG | 0.451867 | tig0024910:-46591 | None:intergenic |
| CAGCTCATAAGTACTGTTGC+TGG | 0.456802 | tig0024910:-52256 | None:intergenic |
| GTTCTCTTGATCCTTAGTCT+TGG | 0.461933 | tig0024910:-52668 | None:intergenic |
| CACCCAAAGCTTTAATAAGC+AGG | 0.463428 | tig0024910:+53116 | Msa1421110:CDS |
| CTTCCATTGTCTTTCCAGGA+TGG | 0.469552 | tig0024910:-48288 | None:intergenic |
| TTCCATTGTCTTTCCAGGAT+GGG | 0.478645 | tig0024910:-48287 | None:intergenic |
| CAATCTCAAATGCTCGAGTC+AGG | 0.481760 | tig0024910:-48441 | None:intergenic |
| TGAAGCCTGTCTTAAACGCT+TGG | 0.485526 | tig0024910:+48744 | Msa1421110:CDS |
| TTGCTGGTGTCTGTGATTCG+AGG | 0.493541 | tig0024910:-52240 | None:intergenic |
| ATCTGCTTCTGATGGAGGCG+GGG | 0.494333 | tig0024910:+48339 | Msa1421110:CDS |
| CCCCTCCAAGCGTTTAAGAC+AGG | 0.494529 | tig0024910:-48749 | None:intergenic |
| GGTAGCTTGAAACATTTCTC+TGG | 0.496750 | tig0024910:-52700 | None:intergenic |
| CGTGGTGATACTTCCCATCC+TGG | 0.503769 | tig0024910:+48274 | Msa1421110:CDS |
| TCTGCTTCTGATGGAGGCGG+GGG | 0.504719 | tig0024910:+48340 | Msa1421110:CDS |
| TGGATCCGAACGTCCCTCGA+TGG | 0.506017 | tig0024910:+46586 | Msa1421110:CDS |
| TAAATGTGTGTAGGGATGCA+AGG | 0.509400 | tig0024910:+48142 | Msa1421110:intron |
| GGGGAAACTCATTGTCTCCG+GGG | 0.509988 | tig0024910:+48359 | Msa1421110:CDS |
| TATGCAGAAGAAGGCAAGCT+TGG | 0.514890 | tig0024910:-51413 | None:intergenic |
| GAATCTGCTTCTGATGGAGG+CGG | 0.515512 | tig0024910:+48337 | Msa1421110:CDS |
| CATTTGCCACCTCATAACTC+TGG | 0.520812 | tig0024910:+48397 | Msa1421110:CDS |
| GGATGAGATAAATGCAGCAT+GGG | 0.526980 | tig0024910:+51389 | Msa1421110:CDS |
| GTGCTCCAGAACAAGTTGAC+TGG | 0.540441 | tig0024910:-52586 | None:intergenic |
| TAGCCGCTTCAAAGAATTGG+AGG | 0.541238 | tig0024910:+50072 | Msa1421110:CDS |
| AGCCTGTCTTAAACGCTTGG+AGG | 0.542097 | tig0024910:+48747 | Msa1421110:CDS |
| GGATCCGAACGTCCCTCGAT+GGG | 0.545053 | tig0024910:+46587 | Msa1421110:CDS |
| ATGCAAGGGTCATCTATTCA+TGG | 0.545903 | tig0024910:+48157 | Msa1421110:CDS |
| GCCTGTCTTAAACGCTTGGA+GGG | 0.547231 | tig0024910:+48748 | Msa1421110:CDS |
| ATACCATTGCTGAAAGAGGT+TGG | 0.550854 | tig0024910:-53218 | None:intergenic |
| CTTCCAACCTCTTTCAGCAA+TGG | 0.551764 | tig0024910:+53215 | Msa1421110:CDS |
| AGAAGAAAGAAGACTAGAAG+CGG | 0.552430 | tig0024910:+49982 | Msa1421110:CDS |
| AAGTCGGAATCTGCTTCTGA+TGG | 0.553414 | tig0024910:+48331 | Msa1421110:CDS |
| CGAGGGACGTTCGGATCCAC+CGG | 0.556220 | tig0024910:-46582 | None:intergenic |
| GAAGTATCACCACGAGGCCG+AGG | 0.564401 | tig0024910:-48265 | None:intergenic |
| GGCACATTGTATGCAGAAGA+AGG | 0.565635 | tig0024910:-51422 | None:intergenic |
| CTGTCTTAAACGCTTGGAGG+GGG | 0.566042 | tig0024910:+48750 | Msa1421110:CDS |
| AAGCAAAGACCTCAGGCTCA+AGG | 0.574216 | tig0024910:+48235 | Msa1421110:CDS |
| GCTCCTCCAATTCTTTGAAG+CGG | 0.574855 | tig0024910:-50075 | None:intergenic |
| AAATGTGTGTAGGGATGCAA+GGG | 0.574883 | tig0024910:+48143 | Msa1421110:intron |
| TCGACGCCAACGATGCAAAG+TGG | 0.576527 | tig0024910:-46630 | None:intergenic |
| TCGGAATCTGCTTCTGATGG+AGG | 0.577035 | tig0024910:+48334 | Msa1421110:CDS |
| GTTGCCAAAGCAAAGACCTC+AGG | 0.579073 | tig0024910:+48228 | Msa1421110:CDS |
| AGGCTCAAGGAGTTCCTCCT+CGG | 0.586199 | tig0024910:+48248 | Msa1421110:CDS |
| TTCCCATCCTGGAAAGACAA+TGG | 0.588109 | tig0024910:+48285 | Msa1421110:CDS |
| TGCTGGTGTCTGTGATTCGA+GGG | 0.588115 | tig0024910:-52239 | None:intergenic |
| GGGATGAGATAAATGCAGCA+TGG | 0.589013 | tig0024910:+51388 | Msa1421110:CDS |
| GAATTGAATCCAGAGTTATG+AGG | 0.590276 | tig0024910:-48406 | None:intergenic |
| AGCTTGAAACATTTCTCTGG+TGG | 0.591769 | tig0024910:-52697 | None:intergenic |
| GCGAACCTGGGTCTGTGTTG+TGG | 0.592083 | tig0024910:-48464 | None:intergenic |
| ACATGCTGAAGTGCCAGCTG+TGG | 0.592774 | tig0024910:+53245 | Msa1421110:CDS |
| CCTGTCTTAAACGCTTGGAG+GGG | 0.597661 | tig0024910:+48749 | Msa1421110:CDS |
| GGAGGAACTCCTTGAGCCTG+AGG | 0.598305 | tig0024910:-48244 | None:intergenic |
| AATTGCAATGAAAATCTCAT+CGG | 0.598768 | tig0024910:+46509 | Msa1421110:exon |
| ACAAAACTCGCATGCAGTCA+AGG | 0.604059 | tig0024910:-48669 | None:intergenic |
| GGGTACAAAGATCCCACAGC+TGG | 0.605818 | tig0024910:-53258 | None:intergenic |
| GGAGTTCCTCCTCGGCCTCG+TGG | 0.607193 | tig0024910:+48256 | Msa1421110:CDS |
| TGAAGTAAATGCTGAACTGA+AGG | 0.613224 | tig0024910:+50033 | Msa1421110:CDS |
| GATTGCCACAACACAGACCC+AGG | 0.618152 | tig0024910:+48459 | Msa1421110:CDS |
| ATTCGAGGGTAGCTACCCAT+AGG | 0.618428 | tig0024910:-52225 | None:intergenic |
| AAGGATACTGAAACTTCGGT+CGG | 0.619914 | tig0024910:-51452 | None:intergenic |
| TGACCACCATGATCAACCCC+CGG | 0.629604 | tig0024910:-48376 | None:intergenic |
| CAAATTCTGCGAAATCCTTG+AGG | 0.638626 | tig0024910:-52645 | None:intergenic |
| CAACGATGCAAAGTGGATTG+CGG | 0.640313 | tig0024910:-46623 | None:intergenic |
| AAATCTCATCGGTGCAAGAG+AGG | 0.641636 | tig0024910:+46520 | Msa1421110:CDS |
| GGATCTTTGTACCCGAAGCG+TGG | 0.642830 | tig0024910:+53267 | Msa1421110:CDS |
| GGGAAACTCATTGTCTCCGG+GGG | 0.643396 | tig0024910:+48360 | Msa1421110:CDS |
| AGTTCTGACAAACCCATCGA+GGG | 0.647106 | tig0024910:-46599 | None:intergenic |
| GAAGATACCATTGCTGAAAG+AGG | 0.647747 | tig0024910:-53222 | None:intergenic |
| CATGCTGAAGTGCCAGCTGT+GGG | 0.653216 | tig0024910:+53246 | Msa1421110:CDS |
| AGAAACTAACCAGAACGAGA+AGG | 0.653735 | tig0024910:-46681 | None:intergenic |
| TTCAAAACTACCGAATACAA+AGG | 0.655732 | tig0024910:-53450 | None:intergenic |
| GTATCACCACGAGGCCGAGG+AGG | 0.655786 | tig0024910:-48262 | None:intergenic |
| TCGGAATCGGAGCTTACCGG+TGG | 0.658622 | tig0024910:+46566 | Msa1421110:CDS |
| TTGAATCCAGAGTTATGAGG+TGG | 0.665081 | tig0024910:-48403 | None:intergenic |
| CAGTTCTGACAAACCCATCG+AGG | 0.678531 | tig0024910:-46600 | None:intergenic |
| TAAGAAAATCAGCCTCGCTG+AGG | 0.688641 | tig0024910:-48786 | None:intergenic |
| AGAGGTCGAAGATGTAAACA+GGG | 0.696790 | tig0024910:+48708 | Msa1421110:CDS |
| GGCCAAAGATGTCCTCAGCG+AGG | 0.702573 | tig0024910:+48774 | Msa1421110:CDS |
| GCTTCAAAGAATTGGAGGAG+CGG | 0.703613 | tig0024910:+50077 | Msa1421110:CDS |
| GATGAGATAAATGCAGCATG+GGG | 0.718114 | tig0024910:+51390 | Msa1421110:CDS |
| GGATGGGAAGTATCACCACG+AGG | 0.788789 | tig0024910:-48271 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTTTTATTTGAATTT+TGG | + | tig0024910:47745-47764 | Msa1421110:intron | 10.0% |
| !!! | TTTTTTTTATTTGAATTTTG+GGG | + | tig0024910:47747-47766 | Msa1421110:intron | 10.0% |
| !!! | ATTTATTTTCTTTTATTGTA+TGG | + | tig0024910:49077-49096 | Msa1421110:intron | 10.0% |
| !! | TAAGTAGTAAATAATTAATT+AGG | - | tig0024910:49940-49959 | None:intergenic | 10.0% |
| !!! | TGATCAATATTTTTTTTTTT+TGG | + | tig0024910:50942-50961 | Msa1421110:intron | 10.0% |
| !!! | TATACATTTTACAATTTATT+AGG | + | tig0024910:52145-52164 | Msa1421110:intron | 10.0% |
| !!! | TATTTTAATATGAAAGAAAA+AGG | - | tig0024910:52896-52915 | None:intergenic | 10.0% |
| !!! | TGTATCAAAAATGAATTTTA+TGG | + | tig0024910:46817-46836 | Msa1421110:intron | 15.0% |
| !!! | ATTTTTGACAAAAAAAATAG+AGG | + | tig0024910:47272-47291 | Msa1421110:intron | 15.0% |
| !!! | TTGTTTTTTTTTAGTATGAA+TGG | + | tig0024910:47685-47704 | Msa1421110:intron | 15.0% |
| !!! | CAATTTTAAACTTTTTTTGT+TGG | + | tig0024910:47976-47995 | Msa1421110:intron | 15.0% |
| !! | TTGAAAATATAATGTTGTTA+AGG | - | tig0024910:50125-50144 | None:intergenic | 15.0% |
| !! | AAAAAATATTGATCAAATAG+TGG | - | tig0024910:50937-50956 | None:intergenic | 15.0% |
| !!! | TACAACAATTTATTTTATGA+AGG | - | tig0024910:51188-51207 | None:intergenic | 15.0% |
| !!! | TTTTGATTTTTGAAACATTT+AGG | + | tig0024910:51359-51378 | Msa1421110:intron | 15.0% |
| !!! | AAAATCAACTTTTTTTTTTG+AGG | - | tig0024910:51676-51695 | None:intergenic | 15.0% |
| !! | TTGTTCAAAAAAAAAAACTT+TGG | - | tig0024910:51905-51924 | None:intergenic | 15.0% |
| !!! | ATTTTACAATTTATTAGGAA+TGG | + | tig0024910:52150-52169 | Msa1421110:intron | 15.0% |
| !! | AGTCATAATAATATAAAATG+TGG | + | tig0024910:52468-52487 | Msa1421110:intron | 15.0% |
| !!! | TTTTTAAAATTTGTACTGTT+TGG | - | tig0024910:52840-52859 | None:intergenic | 15.0% |
| !!! | TTTTTGATGTTTATCTTATT+AGG | + | tig0024910:52930-52949 | Msa1421110:intron | 15.0% |
| !! | TTATAGTTTATTCGATTGAT+TGG | + | tig0024910:46882-46901 | Msa1421110:intron | 20.0% |
| !! | GAATAAGAATTTATTCAGTT+AGG | - | tig0024910:46925-46944 | None:intergenic | 20.0% |
| !! | AGTATTATAACAACATAGAT+TGG | + | tig0024910:47437-47456 | Msa1421110:intron | 20.0% |
| !! | TTCAAAATCAAAATTAGCAA+CGG | - | tig0024910:48006-48025 | None:intergenic | 20.0% |
| !!! | GTTTGAATGTTTTATGTATA+TGG | + | tig0024910:48623-48642 | Msa1421110:intron | 20.0% |
| !! | TATTCAGAATAAACCAATAT+TGG | - | tig0024910:49013-49032 | None:intergenic | 20.0% |
| !! | ATTTCACAACAGATTATTTA+TGG | - | tig0024910:49122-49141 | None:intergenic | 20.0% |
| !! | TACATATATAATTCCTACAT+AGG | - | tig0024910:49381-49400 | None:intergenic | 20.0% |
| !! | GTAATATTATGTATAGCAAT+AGG | + | tig0024910:49398-49417 | Msa1421110:intron | 20.0% |
| !!! | TGCTTTAAATTTTGAAGTTA+TGG | + | tig0024910:49780-49799 | Msa1421110:intron | 20.0% |
| !!! | TTTTCTTTTATTCTTTAGTG+TGG | + | tig0024910:50234-50253 | Msa1421110:intron | 20.0% |
| !! | AAGATTCTCAATAAAATCTA+AGG | - | tig0024910:50389-50408 | None:intergenic | 20.0% |
| !!! | GATTTTTCCAAAAAATAAAC+AGG | - | tig0024910:50464-50483 | None:intergenic | 20.0% |
| !!! | TTGGAACAATTAACAATTTT+CGG | + | tig0024910:50644-50663 | Msa1421110:CDS | 20.0% |
| !! | ATATTCAAATCATCAAATGA+GGG | - | tig0024910:51231-51250 | None:intergenic | 20.0% |
| !! | ATCTTAAACTAGAAAGAAAA+AGG | - | tig0024910:51311-51330 | None:intergenic | 20.0% |
| !! | CTGATATACTTAATGAAAAA+AGG | - | tig0024910:51474-51493 | None:intergenic | 20.0% |
| !! | ATTTCTTCATGTATCTAAAA+AGG | - | tig0024910:51788-51807 | None:intergenic | 20.0% |
| !! | TTTCTAGATAGTATATAATG+TGG | + | tig0024910:52004-52023 | Msa1421110:intron | 20.0% |
| !! | GTAAAATGTATAATGAAATG+TGG | - | tig0024910:52137-52156 | None:intergenic | 20.0% |
| !! | TCTAAAAAGTAATGAGTTAA+GGG | - | tig0024910:52187-52206 | None:intergenic | 20.0% |
| !! | ATCTAAAAAGTAATGAGTTA+AGG | - | tig0024910:52188-52207 | None:intergenic | 20.0% |
| !! | TCGAATAAAAATAATTCCTA+TGG | + | tig0024910:52209-52228 | Msa1421110:CDS | 20.0% |
| !! | CGAATAAAAATAATTCCTAT+GGG | + | tig0024910:52210-52229 | Msa1421110:CDS | 20.0% |
| !!! | ATTACTTTTTCTCAAGTATA+TGG | + | tig0024910:52324-52343 | Msa1421110:intron | 20.0% |
| !!! | TTCCTGTTTCTAAAATATTT+AGG | + | tig0024910:52383-52402 | Msa1421110:intron | 20.0% |
| !!! | TCCTGTTTCTAAAATATTTA+GGG | + | tig0024910:52384-52403 | Msa1421110:intron | 20.0% |
| !! | AAGTTTAACAAAAATTCTGA+AGG | - | tig0024910:52522-52541 | None:intergenic | 20.0% |
| !! | AGATAAACATCAAAAAGAAA+AGG | - | tig0024910:52926-52945 | None:intergenic | 20.0% |
| !! | TAGAACTATTTAGTTGTTAA+CGG | + | tig0024910:53362-53381 | Msa1421110:three_prime_UTR | 20.0% |
| !! | GAGATTTTCATTGCAATTTA+AGG | - | tig0024910:46507-46526 | None:intergenic | 25.0% |
| ! | AATTGCAATGAAAATCTCAT+CGG | + | tig0024910:46509-46528 | Msa1421110:exon | 25.0% |
| ! | TAGTTTCTTATTACTCTCTT+TGG | + | tig0024910:46696-46715 | Msa1421110:intron | 25.0% |
| !! | ATTAACACGACATTTTTAAC+CGG | + | tig0024910:47188-47207 | Msa1421110:intron | 25.0% |
| ! | TCAATGCATATATATGTGAA+AGG | + | tig0024910:47234-47253 | Msa1421110:intron | 25.0% |
| !! | TTTTGTCAAAAATCTCCAAA+TGG | - | tig0024910:47265-47284 | None:intergenic | 25.0% |
| !! | AAGAACTCTCTAAAAAAATG+TGG | - | tig0024910:47365-47384 | None:intergenic | 25.0% |
| ! | GATTACAATTAGAACTAGAA+TGG | + | tig0024910:47656-47675 | Msa1421110:intron | 25.0% |
| !!! | TTGTTGATTTAGTAGACAAA+TGG | + | tig0024910:47721-47740 | Msa1421110:intron | 25.0% |
| ! | ATGATTTATTCATGATGAAG+AGG | + | tig0024910:47807-47826 | Msa1421110:intron | 25.0% |
| !!! | TGTTATTGTTGATTCACTAT+CGG | + | tig0024910:47882-47901 | Msa1421110:intron | 25.0% |
| !!! | GTGAATATTTGTTGTTGATT+AGG | + | tig0024910:47938-47957 | Msa1421110:intron | 25.0% |
| ! | GGATTTATTAAATGTGTGTA+GGG | + | tig0024910:48134-48153 | Msa1421110:intron | 25.0% |
| ! | GAAATTTACTCATTTGTATG+TGG | + | tig0024910:48524-48543 | Msa1421110:intron | 25.0% |
| !! | TGTTTTATGTATATGGTTTC+AGG | + | tig0024910:48630-48649 | Msa1421110:intron | 25.0% |
| !! | TTTTCTTAAGGAGAAATTGA+AGG | + | tig0024910:48801-48820 | Msa1421110:CDS | 25.0% |
| !! | TATTACCTAACTGTTTCTTT+AGG | + | tig0024910:48855-48874 | Msa1421110:intron | 25.0% |
| !!! | GTTTGCTTTGTTTGAATTTA+TGG | + | tig0024910:48967-48986 | Msa1421110:intron | 25.0% |
| !! | TATGTGTTTTCTTCCAATAT+TGG | + | tig0024910:48997-49016 | Msa1421110:intron | 25.0% |
| !! | TTCTTTTATTGTATGGAGAA+TGG | + | tig0024910:49084-49103 | Msa1421110:intron | 25.0% |
| ! | AAAATGTATCCAAGTGAATT+TGG | - | tig0024910:49199-49218 | None:intergenic | 25.0% |
| ! | GCAAAAAGACTAAAATATGA+CGG | - | tig0024910:49339-49358 | None:intergenic | 25.0% |
| ! | TAAAACTTCGAGATTGAAAA+CGG | - | tig0024910:49440-49459 | None:intergenic | 25.0% |
| !!! | AGTTGGTTATTAGTTTGTTT+TGG | + | tig0024910:49644-49663 | Msa1421110:intron | 25.0% |
| !!! | ATTCCAATTTTTGAAAACAC+TGG | + | tig0024910:49865-49884 | Msa1421110:intron | 25.0% |
| ! | TATAATGTTGTTAAGGACAA+AGG | - | tig0024910:50118-50137 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTATCTTGAACTA+CGG | - | tig0024910:50159-50178 | None:intergenic | 25.0% |
| !! | ATTCATAGAAAGCTCATTTT+GGG | - | tig0024910:50211-50230 | None:intergenic | 25.0% |
| ! | GCAAAAATATTTCAATCAAC+AGG | + | tig0024910:50510-50529 | Msa1421110:intron | 25.0% |
| ! | AAAATATTTCAATCAACAGG+AGG | + | tig0024910:50513-50532 | Msa1421110:intron | 25.0% |
| !! | GTATGATTTGATTTCATTGT+TGG | + | tig0024910:50757-50776 | Msa1421110:intron | 25.0% |
| ! | CATATTCAAATCATCAAATG+AGG | - | tig0024910:51232-51251 | None:intergenic | 25.0% |
| !! | CATTTGATGATTTGAATATG+TGG | + | tig0024910:51232-51251 | Msa1421110:intron | 25.0% |
| !! | TTTGAAACATTTAGGTAGAA+TGG | + | tig0024910:51367-51386 | Msa1421110:intron | 25.0% |
| ! | TTGAAACATTTAGGTAGAAT+GGG | + | tig0024910:51368-51387 | Msa1421110:intron | 25.0% |
| ! | AAAAAAGGATACTGAAACTT+CGG | - | tig0024910:51459-51478 | None:intergenic | 25.0% |
| ! | AGATGATAATCACTATAACT+TGG | - | tig0024910:51628-51647 | None:intergenic | 25.0% |
| !!! | ATCAATGATTTTAAGAAGAC+AGG | + | tig0024910:51815-51834 | Msa1421110:intron | 25.0% |
| !!! | TCAATGATTTTAAGAAGACA+GGG | + | tig0024910:51816-51835 | Msa1421110:intron | 25.0% |
| !! | TTACTTGTTAAAATCTTGCA+TGG | + | tig0024910:51871-51890 | Msa1421110:intron | 25.0% |
| !! | TTTTCCAATCACAGTTAATT+TGG | + | tig0024910:52042-52061 | Msa1421110:intron | 25.0% |
| ! | AATTCCAAATTAACTGTGAT+TGG | - | tig0024910:52049-52068 | None:intergenic | 25.0% |
| !!! | ACCCTAAATATTTTAGAAAC+AGG | - | tig0024910:52388-52407 | None:intergenic | 25.0% |
| ! | TGTAACAATGCTTACTTATA+AGG | - | tig0024910:52724-52743 | None:intergenic | 25.0% |
| !! | TAAGTAAGCATTGTTACATA+TGG | + | tig0024910:52726-52745 | Msa1421110:intron | 25.0% |
| ! | TTGATGTTTATCTTATTAGG+TGG | + | tig0024910:52933-52952 | Msa1421110:intron | 25.0% |
| ! | AATATGTTATGTTCAGTTTC+TGG | - | tig0024910:53313-53332 | None:intergenic | 25.0% |
| ! | AACTGAACATAACATATTCT+AGG | + | tig0024910:53315-53334 | Msa1421110:exon | 25.0% |
| ! | GCTGATTCTTTCTTTGAATT+TGG | + | tig0024910:46749-46768 | Msa1421110:intron | 30.0% |
| AATAAATTCTTATTCGTCCC+CGG | + | tig0024910:46930-46949 | Msa1421110:intron | 30.0% | |
| ACAAAAAAAATAGAGGCAGT+CGG | + | tig0024910:47279-47298 | Msa1421110:intron | 30.0% | |
| CATGATGAAGAGGTAAATAA+TGG | + | tig0024910:47817-47836 | Msa1421110:intron | 30.0% | |
| AACAAATATTCACACAGAAC+TGG | - | tig0024910:47931-47950 | None:intergenic | 30.0% | |
| GTTACTGTGATGATATAGAA+CGG | + | tig0024910:48111-48130 | Msa1421110:intron | 30.0% | |
| TTACTGTGATGATATAGAAC+GGG | + | tig0024910:48112-48131 | Msa1421110:intron | 30.0% | |
| GGGATTTATTAAATGTGTGT+AGG | + | tig0024910:48133-48152 | Msa1421110:intron | 30.0% | |
| TGTTCGGTTCAAACATAAAT+TGG | + | tig0024910:48502-48521 | Msa1421110:intron | 30.0% | |
| TCAATCCTAAAGAAACAGTT+AGG | - | tig0024910:48863-48882 | None:intergenic | 30.0% | |
| !! | AACTGTTTCTTTAGGATTGA+AGG | + | tig0024910:48863-48882 | Msa1421110:intron | 30.0% |
| AATTGAACTTAAGCAAACAG+AGG | - | tig0024910:48913-48932 | None:intergenic | 30.0% | |
| AATTCAAACAAAGCAAACAG+AGG | - | tig0024910:48965-48984 | None:intergenic | 30.0% | |
| !! | GCTTTGTTTGAATTTATGGT+CGG | + | tig0024910:48971-48990 | Msa1421110:intron | 30.0% |
| TTTGAAAACACATTCCATGT+TGG | + | tig0024910:49038-49057 | Msa1421110:intron | 30.0% | |
| CTTCCAAATCAAATATGTCA+TGG | - | tig0024910:49266-49285 | None:intergenic | 30.0% | |
| TTACTTTATGTGTTAGCAAC+AGG | + | tig0024910:49457-49476 | Msa1421110:intron | 30.0% | |
| AAACATACACATCCCTAATT+GGG | - | tig0024910:49485-49504 | None:intergenic | 30.0% | |
| !!! | TGGTTATTAGTTTGTTTTGG+AGG | + | tig0024910:49647-49666 | Msa1421110:intron | 30.0% |
| CTCTATAACTCTATACCAAA+GGG | - | tig0024910:49681-49700 | None:intergenic | 30.0% | |
| CTTTGGTATAGAGTTATAGA+GGG | + | tig0024910:49680-49699 | Msa1421110:intron | 30.0% | |
| ! | AGACCAGTGTTTTCAAAAAT+TGG | - | tig0024910:49871-49890 | None:intergenic | 30.0% |
| ! | TTCATAGAAAGCTCATTTTG+GGG | - | tig0024910:50210-50229 | None:intergenic | 30.0% |
| ! | GATTCATAGAAAGCTCATTT+TGG | - | tig0024910:50212-50231 | None:intergenic | 30.0% |
| ! | GTTTCAATTGATTTCACATC+AGG | + | tig0024910:50334-50353 | Msa1421110:CDS | 30.0% |
| !!! | TCTGTGTCCTGTTTATTTTT+TGG | + | tig0024910:50454-50473 | Msa1421110:intron | 30.0% |
| ! | ACAATTAACAATTTTCGGCT+TGG | + | tig0024910:50649-50668 | Msa1421110:CDS | 30.0% |
| ! | AACAACATTTTCACGTATGT+TGG | - | tig0024910:50819-50838 | None:intergenic | 30.0% |
| TAACACTCAAATCTCTATAG+CGG | + | tig0024910:51015-51034 | Msa1421110:intron | 30.0% | |
| TGATGATATGTTCAACTTCA+TGG | + | tig0024910:51138-51157 | Msa1421110:intron | 30.0% | |
| ATGAAGGAAATAGCAAAACA+TGG | - | tig0024910:51172-51191 | None:intergenic | 30.0% | |
| ! | GAACTAGTTTCATTAACTCA+TGG | - | tig0024910:51558-51577 | None:intergenic | 30.0% |
| !! | CAATGATTTTAAGAAGACAG+GGG | + | tig0024910:51817-51836 | Msa1421110:intron | 30.0% |
| AGACAGCACTTAATAAACTT+TGG | - | tig0024910:51932-51951 | None:intergenic | 30.0% | |
| CTAGATAGTATATAATGTGG+TGG | + | tig0024910:52007-52026 | Msa1421110:intron | 30.0% | |
| AAAACCGTAGCCATTAATAA+TGG | - | tig0024910:52555-52574 | None:intergenic | 30.0% | |
| ! | TGTACTGTTTGGTTTAGTTA+GGG | - | tig0024910:52829-52848 | None:intergenic | 30.0% |
| ! | TTGTACTGTTTGGTTTAGTT+AGG | - | tig0024910:52830-52849 | None:intergenic | 30.0% |
| GATAAATGATTCTCAAAGCA+TGG | - | tig0024910:52984-53003 | None:intergenic | 30.0% | |
| AGAATGACAAATATTTGTGC+TGG | + | tig0024910:53053-53072 | Msa1421110:intron | 30.0% | |
| !! | AAATATTTGTGCTGGTTTGT+AGG | + | tig0024910:53061-53080 | Msa1421110:intron | 30.0% |
| TTCCTGCTTATTAAAGCTTT+GGG | - | tig0024910:53121-53140 | None:intergenic | 30.0% | |
| TTTCCTGCTTATTAAAGCTT+TGG | - | tig0024910:53122-53141 | None:intergenic | 30.0% | |
| GCTTTAATAAGCAGGAAAAT+TGG | + | tig0024910:53124-53143 | Msa1421110:CDS | 30.0% | |
| TAGCTTATGTCCTTTGTATT+CGG | + | tig0024910:53440-53459 | Msa1421110:three_prime_UTR | 30.0% | |
| TTCAAAACTACCGAATACAA+AGG | - | tig0024910:53453-53472 | None:intergenic | 30.0% | |
| !! | AGGATCGTTGAAGTACTTTT+CGG | - | tig0024910:46664-46683 | None:intergenic | 35.0% |
| TGTAATTAAGGCTCTGTTTG+CGG | + | tig0024910:47302-47321 | Msa1421110:intron | 35.0% | |
| !! | TCGGTGTTACTTCAATTGTA+CGG | + | tig0024910:47901-47920 | Msa1421110:intron | 35.0% |
| TACTGTGATGATATAGAACG+GGG | + | tig0024910:48113-48132 | Msa1421110:intron | 35.0% | |
| TGTGATGAGCACAACTAAAA+TGG | + | tig0024910:48189-48208 | Msa1421110:CDS | 35.0% | |
| !! | TTTTGTGGTAGTGTACAAGT+CGG | + | tig0024910:48315-48334 | Msa1421110:CDS | 35.0% |
| GAATTGAATCCAGAGTTATG+AGG | - | tig0024910:48409-48428 | None:intergenic | 35.0% | |
| CATACAGAAATCTGCATGTT+CGG | + | tig0024910:48486-48505 | Msa1421110:intron | 35.0% | |
| GTCTGATAAGCTTGATAAAG+AGG | + | tig0024910:48690-48709 | Msa1421110:CDS | 35.0% | |
| GAGGTTAGGAATTAAACTTG+TGG | - | tig0024910:48946-48965 | None:intergenic | 35.0% | |
| AAACAAAGCAAACAGAGGTT+AGG | - | tig0024910:48960-48979 | None:intergenic | 35.0% | |
| GAATTGAAATGCTTCCAACA+TGG | - | tig0024910:49055-49074 | None:intergenic | 35.0% | |
| AATATGTCATGGCTCTTGAA+TGG | - | tig0024910:49255-49274 | None:intergenic | 35.0% | |
| GAGCCATGACATATTTGATT+TGG | + | tig0024910:49260-49279 | Msa1421110:intron | 35.0% | |
| ! | CCTACATAGGAATCATCTTT+TGG | - | tig0024910:49368-49387 | None:intergenic | 35.0% |
| CCAAAAGATGATTCCTATGT+AGG | + | tig0024910:49365-49384 | Msa1421110:intron | 35.0% | |
| TGAAAACGGTAGCATCAATT+GGG | - | tig0024910:49426-49445 | None:intergenic | 35.0% | |
| TTGAAAACGGTAGCATCAAT+TGG | - | tig0024910:49427-49446 | None:intergenic | 35.0% | |
| CAAACATACACATCCCTAAT+TGG | - | tig0024910:49486-49505 | None:intergenic | 35.0% | |
| CTGACGTTGGATATAAATAG+AGG | + | tig0024910:49597-49616 | Msa1421110:intron | 35.0% | |
| TGTAAACGCATTCAGTTAGT+TGG | + | tig0024910:49627-49646 | Msa1421110:intron | 35.0% | |
| CCTCTATAACTCTATACCAA+AGG | - | tig0024910:49682-49701 | None:intergenic | 35.0% | |
| CCTTTGGTATAGAGTTATAG+AGG | + | tig0024910:49679-49698 | Msa1421110:intron | 35.0% | |
| GAGTAACAGAAAGAGAACAT+GGG | - | tig0024910:49721-49740 | None:intergenic | 35.0% | |
| TTCTGTTACTCCCTAGTTTA+TGG | + | tig0024910:49730-49749 | Msa1421110:intron | 35.0% | |
| TAGAACTGGACCATAAACTA+GGG | - | tig0024910:49743-49762 | None:intergenic | 35.0% | |
| ATAGAACTGGACCATAAACT+AGG | - | tig0024910:49744-49763 | None:intergenic | 35.0% | |
| ATGGTCCAGTTCTATCAAAA+TGG | + | tig0024910:49749-49768 | Msa1421110:intron | 35.0% | |
| TGGTCCAGTTCTATCAAAAT+GGG | + | tig0024910:49750-49769 | Msa1421110:intron | 35.0% | |
| TCATTGTTTGTGTGGTGATT+TGG | + | tig0024910:49806-49825 | Msa1421110:intron | 35.0% | |
| GGCTTTCAAAGAAAACATAG+TGG | - | tig0024910:49919-49938 | None:intergenic | 35.0% | |
| AGAAGAAAGAAGACTAGAAG+CGG | + | tig0024910:49982-50001 | Msa1421110:CDS | 35.0% | |
| TGAAGTAAATGCTGAACTGA+AGG | + | tig0024910:50033-50052 | Msa1421110:CDS | 35.0% | |
| ! | TCATAGAAAGCTCATTTTGG+GGG | - | tig0024910:50209-50228 | None:intergenic | 35.0% |
| TACATGTATGAATGTGTAGC+AGG | + | tig0024910:50285-50304 | Msa1421110:intron | 35.0% | |
| TATGAATGTGTAGCAGGTAT+TGG | + | tig0024910:50291-50310 | Msa1421110:intron | 35.0% | |
| TGCTTGTGAAACTTCAATCT+TGG | - | tig0024910:50557-50576 | None:intergenic | 35.0% | |
| !! | GCTTTTCCTATTTCTCATGA+TGG | + | tig0024910:50616-50635 | Msa1421110:CDS | 35.0% |
| AACTCTCCATCATGAGAAAT+AGG | - | tig0024910:50625-50644 | None:intergenic | 35.0% | |
| ! | ATTTCTCATGATGGAGAGTT+TGG | + | tig0024910:50625-50644 | Msa1421110:CDS | 35.0% |
| ! | ACGCATCTTACTGGAATTTT+GGG | - | tig0024910:50682-50701 | None:intergenic | 35.0% |
| ! | TACGCATCTTACTGGAATTT+TGG | - | tig0024910:50683-50702 | None:intergenic | 35.0% |
| ! | ACATTTTCACGTATGTTGGT+AGG | - | tig0024910:50815-50834 | None:intergenic | 35.0% |
| TCAAATCATCAAATGAGGGA+AGG | - | tig0024910:51227-51246 | None:intergenic | 35.0% | |
| AACAGAGGAGAAAATTCTTC+AGG | - | tig0024910:51272-51291 | None:intergenic | 35.0% | |
| CTCAAGATTAACAACAACAG+AGG | - | tig0024910:51287-51306 | None:intergenic | 35.0% | |
| ! | CAGAATTTTACATCTGACAG+TGG | + | tig0024910:51582-51601 | Msa1421110:intron | 35.0% |
| CAAGTGATAGATACACCAAA+TGG | + | tig0024910:51710-51729 | Msa1421110:intron | 35.0% | |
| TGATAGATACACCAAATGGT+GGG | + | tig0024910:51714-51733 | Msa1421110:intron | 35.0% | |
| ATGTATCTAAAAAGGCAACC+CGG | - | tig0024910:51780-51799 | None:intergenic | 35.0% | |
| TTATGTCTGTGGTGATATTG+AGG | + | tig0024910:52434-52453 | Msa1421110:intron | 35.0% | |
| GTCTACCATGCCATTATTAA+TGG | + | tig0024910:52542-52561 | Msa1421110:intron | 35.0% | |
| CATGCCATTATTAATGGCTA+CGG | + | tig0024910:52548-52567 | Msa1421110:intron | 35.0% | |
| !!! | ATTGTTTTTAGCATGCCTCA+AGG | + | tig0024910:52630-52649 | Msa1421110:CDS | 35.0% |
| ! | TTTGGTTTAGTTAGGGAAAG+AGG | - | tig0024910:52822-52841 | None:intergenic | 35.0% |
| TCTTTCAACTTGTGAGAAAG+AGG | - | tig0024910:52871-52890 | None:intergenic | 35.0% | |
| !! | CTTATTAAAGCTTTGGGTGA+TGG | - | tig0024910:53115-53134 | None:intergenic | 35.0% |
| ACACACTCTGCAATTTGAAA+TGG | + | tig0024910:53163-53182 | Msa1421110:CDS | 35.0% | |
| ! | CACACTCTGCAATTTGAAAT+GGG | + | tig0024910:53164-53183 | Msa1421110:CDS | 35.0% |
| ! | ATTTGAAATGGGCTCTCTAT+TGG | + | tig0024910:53175-53194 | Msa1421110:CDS | 35.0% |
| ! | TCAGTTTCTGGATTCAGATT+TGG | - | tig0024910:53301-53320 | None:intergenic | 35.0% |
| ATGAGAGAGACGACGAAAAA+GGG | + | tig0024910:46543-46562 | Msa1421110:CDS | 40.0% | |
| AGAAACTAACCAGAACGAGA+AGG | - | tig0024910:46684-46703 | None:intergenic | 40.0% | |
| AAAGAATCAGCGAATTGCAG+AGG | - | tig0024910:46740-46759 | None:intergenic | 40.0% | |
| AGCTACAAAATAAGCCAACC+GGG | - | tig0024910:46951-46970 | None:intergenic | 40.0% | |
| CAGCTACAAAATAAGCCAAC+CGG | - | tig0024910:46952-46971 | None:intergenic | 40.0% | |
| TCACTTGTGTTTATGCTAGC+TGG | + | tig0024910:47158-47177 | Msa1421110:intron | 40.0% | |
| TGTTTATGCTAGCTGGATTC+TGG | + | tig0024910:47165-47184 | Msa1421110:intron | 40.0% | |
| ! | AACACGACATTTTTAACCGG+AGG | + | tig0024910:47191-47210 | Msa1421110:intron | 40.0% |
| !! | CTCTATTTTTCGTCTTCCTC+CGG | - | tig0024910:47210-47229 | None:intergenic | 40.0% |
| ATGTGAAAGGATCGTCCATT+TGG | + | tig0024910:47247-47266 | Msa1421110:intron | 40.0% | |
| GTAATTAAGGCTCTGTTTGC+GGG | + | tig0024910:47303-47322 | Msa1421110:intron | 40.0% | |
| ACATGAATAAGGGGGTTTGT+GGG | - | tig0024910:47519-47538 | None:intergenic | 40.0% | |
| AACATGAATAAGGGGGTTTG+TGG | - | tig0024910:47520-47539 | None:intergenic | 40.0% | |
| ACAAACCCCCTTATTCATGT+TGG | + | tig0024910:47519-47538 | Msa1421110:intron | 40.0% | |
| CAAACCCCCTTATTCATGTT+GGG | + | tig0024910:47520-47539 | Msa1421110:intron | 40.0% | |
| AAACCCCCTTATTCATGTTG+GGG | + | tig0024910:47521-47540 | Msa1421110:intron | 40.0% | |
| TAGTCCCCCAACATGAATAA+GGG | - | tig0024910:47529-47548 | None:intergenic | 40.0% | |
| ATAGTCCCCCAACATGAATA+AGG | - | tig0024910:47530-47549 | None:intergenic | 40.0% | |
| AGGAAAGGGAAATGGAAGAT+AGG | - | tig0024910:47553-47572 | None:intergenic | 40.0% | |
| AGGTAAAAGGAAGGAGGAAA+GGG | - | tig0024910:47567-47586 | None:intergenic | 40.0% | |
| TAGGTAAAAGGAAGGAGGAA+AGG | - | tig0024910:47568-47587 | None:intergenic | 40.0% | |
| GACTTTAGGTAAAAGGAAGG+AGG | - | tig0024910:47573-47592 | None:intergenic | 40.0% | |
| GAGGACTTTAGGTAAAAGGA+AGG | - | tig0024910:47576-47595 | None:intergenic | 40.0% | |
| GTGCAAGGATCATCAATTCA+TGG | + | tig0024910:47616-47635 | Msa1421110:intron | 40.0% | |
| TAAATGTGTGTAGGGATGCA+AGG | + | tig0024910:48142-48161 | Msa1421110:intron | 40.0% | |
| AAATGTGTGTAGGGATGCAA+GGG | + | tig0024910:48143-48162 | Msa1421110:intron | 40.0% | |
| ATGCAAGGGTCATCTATTCA+TGG | + | tig0024910:48157-48176 | Msa1421110:CDS | 40.0% | |
| TTCCATTGTCTTTCCAGGAT+GGG | - | tig0024910:48290-48309 | None:intergenic | 40.0% | |
| ! | GACAATGGAAGAGTCTTTTG+TGG | + | tig0024910:48300-48319 | Msa1421110:CDS | 40.0% |
| TTGAATCCAGAGTTATGAGG+TGG | - | tig0024910:48406-48425 | None:intergenic | 40.0% | |
| AGATTTCTGTATGCGAACCT+GGG | - | tig0024910:48479-48498 | None:intergenic | 40.0% | |
| CTGCTTCTTGAGGAAATGTT+TGG | + | tig0024910:48547-48566 | Msa1421110:intron | 40.0% | |
| AAGAGGTCGAAGATGTAAAC+AGG | + | tig0024910:48707-48726 | Msa1421110:CDS | 40.0% | |
| AGAGGTCGAAGATGTAAACA+GGG | + | tig0024910:48708-48727 | Msa1421110:CDS | 40.0% | |
| !! | AGAAATTGAAGGTGCTCATC+AGG | + | tig0024910:48812-48831 | Msa1421110:intron | 40.0% |
| GAGGCTATGAATACGACTAA+TGG | - | tig0024910:48894-48913 | None:intergenic | 40.0% | |
| CATACCAGACCAAATTCACT+TGG | + | tig0024910:49187-49206 | Msa1421110:intron | 40.0% | |
| GTATCCAAGTGAATTTGGTC+TGG | - | tig0024910:49194-49213 | None:intergenic | 40.0% | |
| TTGGAAGTTGCATTCTCTCA+TGG | + | tig0024910:49279-49298 | Msa1421110:intron | 40.0% | |
| GTTAGTTAGCCCTCTAACTT+TGG | + | tig0024910:49571-49590 | Msa1421110:intron | 40.0% | |
| GGAGTAACAGAAAGAGAACA+TGG | - | tig0024910:49722-49741 | None:intergenic | 40.0% | |
| !! | GCAACCCATTTTGATAGAAC+TGG | - | tig0024910:49757-49776 | None:intergenic | 40.0% |
| TATGGCTGTCATTGTTTGTG+TGG | + | tig0024910:49798-49817 | Msa1421110:intron | 40.0% | |
| ATCTAGCCGCTTCAAAGAAT+TGG | + | tig0024910:50069-50088 | Msa1421110:CDS | 40.0% | |
| ! | CGCATCTTACTGGAATTTTG+GGG | - | tig0024910:50681-50700 | None:intergenic | 40.0% |
| !!! | ATGCGTAGCATGTTGTTTTC+TGG | + | tig0024910:50696-50715 | Msa1421110:intron | 40.0% |
| GGATGAGATAAATGCAGCAT+GGG | + | tig0024910:51389-51408 | Msa1421110:CDS | 40.0% | |
| GATGAGATAAATGCAGCATG+GGG | + | tig0024910:51390-51409 | Msa1421110:CDS | 40.0% | |
| AAGGATACTGAAACTTCGGT+CGG | - | tig0024910:51455-51474 | None:intergenic | 40.0% | |
| GTGATAGATACACCAAATGG+TGG | + | tig0024910:51713-51732 | Msa1421110:intron | 40.0% | |
| CCTATGAACCATGAAGACAA+TGG | - | tig0024910:51843-51862 | None:intergenic | 40.0% | |
| CCATTGTCTTCATGGTTCAT+AGG | + | tig0024910:51840-51859 | Msa1421110:intron | 40.0% | |
| CGTAGCCATTAATAATGGCA+TGG | - | tig0024910:52550-52569 | None:intergenic | 40.0% | |
| ! | ATTAATGGCTACGGTTTTGC+AGG | + | tig0024910:52557-52576 | Msa1421110:intron | 40.0% |
| CAAATTCTGCGAAATCCTTG+AGG | - | tig0024910:52648-52667 | None:intergenic | 40.0% | |
| GTTCTCTTGATCCTTAGTCT+TGG | - | tig0024910:52671-52690 | None:intergenic | 40.0% | |
| AGCTTGAAACATTTCTCTGG+TGG | - | tig0024910:52700-52719 | None:intergenic | 40.0% | |
| GGTAGCTTGAAACATTTCTC+TGG | - | tig0024910:52703-52722 | None:intergenic | 40.0% | |
| ! | CACCCAAAGCTTTAATAAGC+AGG | + | tig0024910:53116-53135 | Msa1421110:CDS | 40.0% |
| ATACCATTGCTGAAAGAGGT+TGG | - | tig0024910:53221-53240 | None:intergenic | 40.0% | |
| GAAGATACCATTGCTGAAAG+AGG | - | tig0024910:53225-53244 | None:intergenic | 40.0% | |
| AAATCTCATCGGTGCAAGAG+AGG | + | tig0024910:46520-46539 | Msa1421110:CDS | 45.0% | |
| GATGAGAGAGACGACGAAAA+AGG | + | tig0024910:46542-46561 | Msa1421110:CDS | 45.0% | |
| ! | AGTTCTGACAAACCCATCGA+GGG | - | tig0024910:46602-46621 | None:intergenic | 45.0% |
| !! | CAACGATGCAAAGTGGATTG+CGG | - | tig0024910:46626-46645 | None:intergenic | 45.0% |
| TTCAACGATCCTTCTCGTTC+TGG | + | tig0024910:46672-46691 | Msa1421110:CDS | 45.0% | |
| AATTCTTATTCGTCCCCGGT+TGG | + | tig0024910:46934-46953 | Msa1421110:intron | 45.0% | |
| GCTACAAAATAAGCCAACCG+GGG | - | tig0024910:46950-46969 | None:intergenic | 45.0% | |
| CGGAGGAAGACGAAAAATAG+AGG | + | tig0024910:47208-47227 | Msa1421110:intron | 45.0% | |
| AGAGGCAGTCGGTGTAATTA+AGG | + | tig0024910:47290-47309 | Msa1421110:intron | 45.0% | |
| AACCCCCTTATTCATGTTGG+GGG | + | tig0024910:47522-47541 | Msa1421110:intron | 45.0% | |
| AGTCCCCCAACATGAATAAG+GGG | - | tig0024910:47528-47547 | None:intergenic | 45.0% | |
| AAGGAAGGAGGAAAGGGAAA+TGG | - | tig0024910:47561-47580 | None:intergenic | 45.0% | |
| AGGGGAGGACTTTAGGTAAA+AGG | - | tig0024910:47580-47599 | None:intergenic | 45.0% | |
| CTTGCACACTTACGCTCTTT+CGG | - | tig0024910:47603-47622 | None:intergenic | 45.0% | |
| TTCCCATCCTGGAAAGACAA+TGG | + | tig0024910:48285-48304 | Msa1421110:CDS | 45.0% | |
| CTTCCATTGTCTTTCCAGGA+TGG | - | tig0024910:48291-48310 | None:intergenic | 45.0% | |
| GACTCTTCCATTGTCTTTCC+AGG | - | tig0024910:48295-48314 | None:intergenic | 45.0% | |
| AAGTCGGAATCTGCTTCTGA+TGG | + | tig0024910:48331-48350 | Msa1421110:CDS | 45.0% | |
| CATTTGCCACCTCATAACTC+TGG | + | tig0024910:48397-48416 | Msa1421110:CDS | 45.0% | |
| CAATCTCAAATGCTCGAGTC+AGG | - | tig0024910:48444-48463 | None:intergenic | 45.0% | |
| CAGATTTCTGTATGCGAACC+TGG | - | tig0024910:48480-48499 | None:intergenic | 45.0% | |
| TTGTATGTGGCTGCTTCTTG+AGG | + | tig0024910:48537-48556 | Msa1421110:intron | 45.0% | |
| ACAAAACTCGCATGCAGTCA+AGG | - | tig0024910:48672-48691 | None:intergenic | 45.0% | |
| TGAAGCCTGTCTTAAACGCT+TGG | + | tig0024910:48744-48763 | Msa1421110:CDS | 45.0% | |
| TAAGAAAATCAGCCTCGCTG+AGG | - | tig0024910:48789-48808 | None:intergenic | 45.0% | |
| !! | CAGCGAGGCTGATTTTCTTA+AGG | + | tig0024910:48789-48808 | Msa1421110:CDS | 45.0% |
| GTCATGGCTCTTGAATGGTT+TGG | - | tig0024910:49250-49269 | None:intergenic | 45.0% | |
| AACAGAGCTAACACAGCTCT+GGG | - | tig0024910:49525-49544 | None:intergenic | 45.0% | |
| !! | CTGTGTTAGCTCTGTTGGTT+AGG | + | tig0024910:49529-49548 | Msa1421110:intron | 45.0% |
| CGTCAGCTACCAAAGTTAGA+GGG | - | tig0024910:49583-49602 | None:intergenic | 45.0% | |
| ACGTCAGCTACCAAAGTTAG+AGG | - | tig0024910:49584-49603 | None:intergenic | 45.0% | |
| ! | CTAACTTTGGTAGCTGACGT+TGG | + | tig0024910:49584-49603 | Msa1421110:intron | 45.0% |
| TAGCCGCTTCAAAGAATTGG+AGG | + | tig0024910:50072-50091 | Msa1421110:CDS | 45.0% | |
| ! | GCTCCTCCAATTCTTTGAAG+CGG | - | tig0024910:50078-50097 | None:intergenic | 45.0% |
| GCTTCAAAGAATTGGAGGAG+CGG | + | tig0024910:50077-50096 | Msa1421110:CDS | 45.0% | |
| !! | AAGCTCATTTTGGGGGTTGA+GGG | - | tig0024910:50202-50221 | None:intergenic | 45.0% |
| !! | AAAGCTCATTTTGGGGGTTG+AGG | - | tig0024910:50203-50222 | None:intergenic | 45.0% |
| ! | GGAGGAGAGAGATGCAATTT+TGG | + | tig0024910:50531-50550 | Msa1421110:intron | 45.0% |
| CAACATGCTACGCATCTTAC+TGG | - | tig0024910:50691-50710 | None:intergenic | 45.0% | |
| ! | CTAGTGCTAAACCCCTTTTG+GGG | - | tig0024910:50891-50910 | None:intergenic | 45.0% |
| ! | GCTAGTGCTAAACCCCTTTT+GGG | - | tig0024910:50892-50911 | None:intergenic | 45.0% |
| ! | TGCTAGTGCTAAACCCCTTT+TGG | - | tig0024910:50893-50912 | None:intergenic | 45.0% |
| AAAAGGGGTTTAGCACTAGC+AGG | + | tig0024910:50892-50911 | Msa1421110:intron | 45.0% | |
| ACTAGCAGGATAGCGTATAG+TGG | + | tig0024910:50906-50925 | Msa1421110:intron | 45.0% | |
| CTAGCAGGATAGCGTATAGT+GGG | + | tig0024910:50907-50926 | Msa1421110:intron | 45.0% | |
| TAGTCAATAGCGCGCTATAG+CGG | - | tig0024910:51083-51102 | None:intergenic | 45.0% | |
| GGGATGAGATAAATGCAGCA+TGG | + | tig0024910:51388-51407 | Msa1421110:CDS | 45.0% | |
| TATGCAGAAGAAGGCAAGCT+TGG | - | tig0024910:51416-51435 | None:intergenic | 45.0% | |
| GGCACATTGTATGCAGAAGA+AGG | - | tig0024910:51425-51444 | None:intergenic | 45.0% | |
| GAAACTTCGGTCGGAAATAC+TGG | - | tig0024910:51446-51465 | None:intergenic | 45.0% | |
| ATCTGACAGTGGTCATGCTA+GGG | + | tig0024910:51593-51612 | Msa1421110:intron | 45.0% | |
| ! | CAGCTCATAAGTACTGTTGC+TGG | - | tig0024910:52259-52278 | None:intergenic | 45.0% |
| GACATAAAGAACTCGAGCCA+GGG | - | tig0024910:52421-52440 | None:intergenic | 45.0% | |
| AGACATAAAGAACTCGAGCC+AGG | - | tig0024910:52422-52441 | None:intergenic | 45.0% | |
| GCTCGAGTTCTTTATGTCTG+TGG | + | tig0024910:52423-52442 | Msa1421110:intron | 45.0% | |
| ! | TTGGTCCAGTCAACTTGTTC+TGG | + | tig0024910:52581-52600 | Msa1421110:CDS | 45.0% |
| CGCAGAATTTGCCAAGACTA+AGG | + | tig0024910:52657-52676 | Msa1421110:CDS | 45.0% | |
| !! | TGGGCTCTCTATTGGTTTGT+TGG | + | tig0024910:53183-53202 | Msa1421110:CDS | 45.0% |
| CTTCCAACCTCTTTCAGCAA+TGG | + | tig0024910:53215-53234 | Msa1421110:CDS | 45.0% | |
| !!! | TTTTTTTTTATTTGAATTTT+GGG | + | tig0024910:47746-47765 | Msa1421110:intron | 5.0% |
| GAGAGACGACGAAAAAGGGT+CGG | + | tig0024910:46547-46566 | Msa1421110:CDS | 50.0% | |
| CGACGAAAAAGGGTCGGAAT+CGG | + | tig0024910:46553-46572 | Msa1421110:CDS | 50.0% | |
| ! | CAGTTCTGACAAACCCATCG+AGG | - | tig0024910:46603-46622 | None:intergenic | 50.0% |
| CGCAATCCACTTTGCATCGT+TGG | + | tig0024910:46624-46643 | Msa1421110:CDS | 50.0% | |
| TAAGGCTCTGTTTGCGGGTT+TGG | + | tig0024910:47308-47327 | Msa1421110:intron | 50.0% | |
| GTCCCCCAACATGAATAAGG+GGG | - | tig0024910:47527-47546 | None:intergenic | 50.0% | |
| ACACTTACGCTCTTTCGGAG+GGG | - | tig0024910:47598-47617 | None:intergenic | 50.0% | |
| CACACTTACGCTCTTTCGGA+GGG | - | tig0024910:47599-47618 | None:intergenic | 50.0% | |
| ! | CGAAAGAGCGTAAGTGTGCA+AGG | + | tig0024910:47601-47620 | Msa1421110:intron | 50.0% |
| GTTGCCAAAGCAAAGACCTC+AGG | + | tig0024910:48228-48247 | Msa1421110:CDS | 50.0% | |
| TGAGCCTGAGGTCTTTGCTT+TGG | - | tig0024910:48235-48254 | None:intergenic | 50.0% | |
| AAGCAAAGACCTCAGGCTCA+AGG | + | tig0024910:48235-48254 | Msa1421110:CDS | 50.0% | |
| TCGGAATCTGCTTCTGATGG+AGG | + | tig0024910:48334-48353 | Msa1421110:CDS | 50.0% | |
| GAATCTGCTTCTGATGGAGG+CGG | + | tig0024910:48337-48356 | Msa1421110:CDS | 50.0% | |
| AATCTGCTTCTGATGGAGGC+GGG | + | tig0024910:48338-48357 | Msa1421110:CDS | 50.0% | |
| CGCATGCAGTCAAGGCATAA+AGG | - | tig0024910:48664-48683 | None:intergenic | 50.0% | |
| AGCCTGTCTTAAACGCTTGG+AGG | + | tig0024910:48747-48766 | Msa1421110:CDS | 50.0% | |
| GCCTGTCTTAAACGCTTGGA+GGG | + | tig0024910:48748-48767 | Msa1421110:CDS | 50.0% | |
| CCTGTCTTAAACGCTTGGAG+GGG | + | tig0024910:48749-48768 | Msa1421110:CDS | 50.0% | |
| CTGTCTTAAACGCTTGGAGG+GGG | + | tig0024910:48750-48769 | Msa1421110:CDS | 50.0% | |
| TTAGCAACAGGCGCCCAATT+AGG | + | tig0024910:49469-49488 | Msa1421110:intron | 50.0% | |
| TAGCAACAGGCGCCCAATTA+GGG | + | tig0024910:49470-49489 | Msa1421110:intron | 50.0% | |
| CAACAGAGCTAACACAGCTC+TGG | - | tig0024910:49526-49545 | None:intergenic | 50.0% | |
| !! | CAGAGCTGTGTTAGCTCTGT+TGG | + | tig0024910:49524-49543 | Msa1421110:intron | 50.0% |
| TTGGAGGTAGACACACCCTT+TGG | + | tig0024910:49663-49682 | Msa1421110:intron | 50.0% | |
| !! | TTTTGGGGGTTGAGGGTTGA+GGG | - | tig0024910:50195-50214 | None:intergenic | 50.0% |
| !! | ATTTTGGGGGTTGAGGGTTG+AGG | - | tig0024910:50196-50215 | None:intergenic | 50.0% |
| GATAGCAGCCAACCCCAAAA+GGG | + | tig0024910:50876-50895 | Msa1421110:intron | 50.0% | |
| ATAGCAGCCAACCCCAAAAG+GGG | + | tig0024910:50877-50896 | Msa1421110:intron | 50.0% | |
| !!! | TGCTAAACCCCTTTTGGGGT+TGG | - | tig0024910:50887-50906 | None:intergenic | 50.0% |
| CATCTGACAGTGGTCATGCT+AGG | + | tig0024910:51592-51611 | Msa1421110:intron | 50.0% | |
| ATTCGAGGGTAGCTACCCAT+AGG | - | tig0024910:52228-52247 | None:intergenic | 50.0% | |
| TGCTGGTGTCTGTGATTCGA+GGG | - | tig0024910:52242-52261 | None:intergenic | 50.0% | |
| TTGCTGGTGTCTGTGATTCG+AGG | - | tig0024910:52243-52262 | None:intergenic | 50.0% | |
| GTCTGTGGTGATATTGAGGC+TGG | + | tig0024910:52438-52457 | Msa1421110:intron | 50.0% | |
| ! | TGGCTACGGTTTTGCAGGTT+TGG | + | tig0024910:52562-52581 | Msa1421110:intron | 50.0% |
| ! | GTGCTCCAGAACAAGTTGAC+TGG | - | tig0024910:52589-52608 | None:intergenic | 50.0% |
| TTGGCTTCAGTACCACGCTT+CGG | - | tig0024910:53282-53301 | None:intergenic | 50.0% | |
| CAAACCCATCGAGGGACGTT+CGG | - | tig0024910:46594-46613 | None:intergenic | 55.0% | |
| TCGACGCCAACGATGCAAAG+TGG | - | tig0024910:46633-46652 | None:intergenic | 55.0% | |
| GCTCTGTTTGCGGGTTTGGA+GGG | + | tig0024910:47312-47331 | Msa1421110:intron | 55.0% | |
| CTCTGTTTGCGGGTTTGGAG+GGG | + | tig0024910:47313-47332 | Msa1421110:intron | 55.0% | |
| CTTTCGGAGGGGAGGACTTT+AGG | - | tig0024910:47587-47606 | None:intergenic | 55.0% | |
| GCACACTTACGCTCTTTCGG+AGG | - | tig0024910:47600-47619 | None:intergenic | 55.0% | |
| AGGCTCAAGGAGTTCCTCCT+CGG | + | tig0024910:48248-48267 | Msa1421110:CDS | 55.0% | |
| !! | GGATGGGAAGTATCACCACG+AGG | - | tig0024910:48274-48293 | None:intergenic | 55.0% |
| CGTGGTGATACTTCCCATCC+TGG | + | tig0024910:48274-48293 | Msa1421110:CDS | 55.0% | |
| ATCTGCTTCTGATGGAGGCG+GGG | + | tig0024910:48339-48358 | Msa1421110:CDS | 55.0% | |
| CGGGGGAAACTCATTGTCTC+CGG | + | tig0024910:48357-48376 | Msa1421110:CDS | 55.0% | |
| GGGGGAAACTCATTGTCTCC+GGG | + | tig0024910:48358-48377 | Msa1421110:CDS | 55.0% | |
| GGGGAAACTCATTGTCTCCG+GGG | + | tig0024910:48359-48378 | Msa1421110:CDS | 55.0% | |
| GGGAAACTCATTGTCTCCGG+GGG | + | tig0024910:48360-48379 | Msa1421110:CDS | 55.0% | |
| ! | TTGTCTCCGGGGGTTGATCA+TGG | + | tig0024910:48370-48389 | Msa1421110:CDS | 55.0% |
| TGACCACCATGATCAACCCC+CGG | - | tig0024910:48379-48398 | None:intergenic | 55.0% | |
| GATTGCCACAACACAGACCC+AGG | + | tig0024910:48459-48478 | Msa1421110:CDS | 55.0% | |
| ! | CCCCTCCAAGCGTTTAAGAC+AGG | - | tig0024910:48752-48771 | None:intergenic | 55.0% |
| TCTTAAACGCTTGGAGGGGG+AGG | + | tig0024910:48753-48772 | Msa1421110:CDS | 55.0% | |
| AGCCTCGCTGAGGACATCTT+TGG | - | tig0024910:48779-48798 | None:intergenic | 55.0% | |
| AGGGTTGAGGGGTGAGGTTA+GGG | - | tig0024910:50183-50202 | None:intergenic | 55.0% | |
| TTTGGGGGTTGAGGGTTGAG+GGG | - | tig0024910:50194-50213 | None:intergenic | 55.0% | |
| GCTATCATAGCAGCCAACCC+TGG | + | tig0024910:50854-50873 | Msa1421110:intron | 55.0% | |
| !! | TTGGGGTTGGCTGCTATCCA+GGG | - | tig0024910:50874-50893 | None:intergenic | 55.0% |
| !! | TTTGGGGTTGGCTGCTATCC+AGG | - | tig0024910:50875-50894 | None:intergenic | 55.0% |
| GGATAGCAGCCAACCCCAAA+AGG | + | tig0024910:50875-50894 | Msa1421110:intron | 55.0% | |
| GACAGGGGCCATTGTCTTCA+TGG | + | tig0024910:51832-51851 | Msa1421110:intron | 55.0% | |
| AAGAACTCGAGCCAGGGCAA+AGG | - | tig0024910:52415-52434 | None:intergenic | 55.0% | |
| ! | ACATGCTGAAGTGCCAGCTG+TGG | + | tig0024910:53245-53264 | Msa1421110:CDS | 55.0% |
| ! | CATGCTGAAGTGCCAGCTGT+GGG | + | tig0024910:53246-53265 | Msa1421110:CDS | 55.0% |
| GGGTACAAAGATCCCACAGC+TGG | - | tig0024910:53261-53280 | None:intergenic | 55.0% | |
| GGATCTTTGTACCCGAAGCG+TGG | + | tig0024910:53267-53286 | Msa1421110:CDS | 55.0% | |
| TGGCTTCAGTACCACGCTTC+GGG | - | tig0024910:53281-53300 | None:intergenic | 55.0% | |
| GGGTCGGAATCGGAGCTTAC+CGG | + | tig0024910:46563-46582 | Msa1421110:CDS | 60.0% | |
| TCGGAATCGGAGCTTACCGG+TGG | + | tig0024910:46566-46585 | Msa1421110:CDS | 60.0% | |
| TGGATCCGAACGTCCCTCGA+TGG | + | tig0024910:46586-46605 | Msa1421110:CDS | 60.0% | |
| GGATCCGAACGTCCCTCGAT+GGG | + | tig0024910:46587-46606 | Msa1421110:CDS | 60.0% | |
| GGCTCTGTTTGCGGGTTTGG+AGG | + | tig0024910:47311-47330 | Msa1421110:intron | 60.0% | |
| CGGGTTTGGAGGGGAGTAGA+GGG | + | tig0024910:47322-47341 | Msa1421110:intron | 60.0% | |
| CTTACGCTCTTTCGGAGGGG+AGG | - | tig0024910:47595-47614 | None:intergenic | 60.0% | |
| GGAGGAACTCCTTGAGCCTG+AGG | - | tig0024910:48247-48266 | None:intergenic | 60.0% | |
| ! | GAAGTATCACCACGAGGCCG+AGG | - | tig0024910:48268-48287 | None:intergenic | 60.0% |
| TCTGCTTCTGATGGAGGCGG+GGG | + | tig0024910:48340-48359 | Msa1421110:CDS | 60.0% | |
| ! | TCTCCGGGGGTTGATCATGG+TGG | + | tig0024910:48373-48392 | Msa1421110:CDS | 60.0% |
| GCGAACCTGGGTCTGTGTTG+TGG | - | tig0024910:48467-48486 | None:intergenic | 60.0% | |
| GGCCAAAGATGTCCTCAGCG+AGG | + | tig0024910:48774-48793 | Msa1421110:CDS | 60.0% | |
| GAGGGTTGAGGGGTGAGGTT+AGG | - | tig0024910:50184-50203 | None:intergenic | 60.0% | |
| ! | GGTTGGCTGCTATCCAGGGT+TGG | - | tig0024910:50870-50889 | None:intergenic | 60.0% |
| GTAGCGTAGCGGCATCGTAG+CGG | - | tig0024910:51059-51078 | None:intergenic | 60.0% | |
| GCTATAGCGGCGTAGCGTAG+CGG | - | tig0024910:51070-51089 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | tig0024910:51726-51745 | Msa1421110:intron | 60.0% |
| CTGAAGCTCCCGCATACGCA+GGG | - | tig0024910:51753-51772 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | - | tig0024910:51754-51773 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | tig0024910:51758-51777 | Msa1421110:intron | 60.0% | |
| TTAGGGTCGTGCCTTTGCCC+TGG | + | tig0024910:52401-52420 | Msa1421110:intron | 60.0% | |
| CGAGGGACGTTCGGATCCAC+CGG | - | tig0024910:46585-46604 | None:intergenic | 65.0% | |
| GCGGGTTTGGAGGGGAGTAG+AGG | + | tig0024910:47321-47340 | Msa1421110:intron | 65.0% | |
| GTATCACCACGAGGCCGAGG+AGG | - | tig0024910:48265-48284 | None:intergenic | 65.0% | |
| GGGTTGAGGGTTGAGGGGTG+AGG | - | tig0024910:50189-50208 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | tig0024910:51728-51747 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | tig0024910:51741-51760 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | tig0024910:51742-51761 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | tig0024910:51741-51760 | Msa1421110:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | tig0024910:51742-51761 | Msa1421110:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | tig0024910:51759-51778 | Msa1421110:intron | 65.0% | |
| GGAGTTCCTCCTCGGCCTCG+TGG | + | tig0024910:48256-48275 | Msa1421110:CDS | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | tig0024910:51743-51762 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | tig0024910:51747-51766 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | tig0024910:51748-51767 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024910 | gene | 46500 | 53581 | 46500 | ID=Msa1421110;Name=Msa1421110 |
| tig0024910 | mRNA | 46500 | 53581 | 46500 | ID=Msa1421110-mRNA-1;Parent=Msa1421110;Name=Msa1421110-mRNA-1;_AED=0.21;_eAED=0.21;_QI=16|1|1|1|1|1|10|261|517 |
| tig0024910 | exon | 46500 | 46693 | 46500 | ID=Msa1421110-mRNA-1:exon:1919;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 48155 | 48480 | 48155 | ID=Msa1421110-mRNA-1:exon:1920;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 48652 | 48822 | 48652 | ID=Msa1421110-mRNA-1:exon:1921;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 49974 | 50098 | 49974 | ID=Msa1421110-mRNA-1:exon:1922;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 50307 | 50355 | 50307 | ID=Msa1421110-mRNA-1:exon:1923;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 50532 | 50690 | 50532 | ID=Msa1421110-mRNA-1:exon:1924;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 51381 | 51466 | 51381 | ID=Msa1421110-mRNA-1:exon:1925;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 52206 | 52277 | 52206 | ID=Msa1421110-mRNA-1:exon:1926;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 52579 | 52728 | 52579 | ID=Msa1421110-mRNA-1:exon:1927;Parent=Msa1421110-mRNA-1 |
| tig0024910 | exon | 53083 | 53581 | 53083 | ID=Msa1421110-mRNA-1:exon:1928;Parent=Msa1421110-mRNA-1 |
| tig0024910 | five_prime_UTR | 46500 | 46515 | 46500 | ID=Msa1421110-mRNA-1:five_prime_utr;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 46516 | 46693 | 46516 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 48155 | 48480 | 48155 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 48652 | 48822 | 48652 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 49974 | 50098 | 49974 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 50307 | 50355 | 50307 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 50532 | 50690 | 50532 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 51381 | 51466 | 51381 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 52206 | 52277 | 52206 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 52579 | 52728 | 52579 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | CDS | 53083 | 53320 | 53083 | ID=Msa1421110-mRNA-1:cds;Parent=Msa1421110-mRNA-1 |
| tig0024910 | three_prime_UTR | 53321 | 53581 | 53321 | ID=Msa1421110-mRNA-1:three_prime_utr;Parent=Msa1421110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
