AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0017320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017320 MtrunA17_Chr1g0169341 98.000 650 13 0 1 650 1 650 0.0 1311
Msa0017320 MtrunA17_Chr7g0274521 56.474 641 244 12 5 631 29 648 0.0 684
Msa0017320 MtrunA17_Chr1g0190281 53.448 638 249 11 5 636 3 598 0.0 632
Msa0017320 MtrunA17_Chr2g0288551 43.740 631 255 11 8 626 26 568 6.83e-164 482
Msa0017320 MtrunA17_Chr1g0169571 61.561 346 131 2 2 346 3 347 1.56e-145 434
Msa0017320 MtrunA17_Chr1g0169571 57.386 176 65 3 474 647 402 569 3.36e-50 183
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017320 AT1G04780.1 70.977 665 166 13 4 649 6 662 0.0 891
Msa0017320 AT3G24210.1 62.282 631 196 10 1 630 1 590 0.0 747
Msa0017320 AT3G04470.1 53.435 655 222 12 5 631 3 602 0.0 668
Msa0017320 AT1G62050.1 43.451 649 270 14 9 627 18 599 6.04e-164 484
Msa0017320 AT1G11740.1 52.318 302 141 1 9 310 17 315 1.51e-105 334
Msa0017320 AT1G11740.1 47.953 171 61 4 479 628 364 527 2.37e-37 148

Find 187 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCACTTGGCTGTTAAATT+AGG 0.055054 1_1:+28688565 Msa0017320:CDS
TGCAACTATAGTTGAGTTAA+TGG 0.161049 1_1:-28693309 None:intergenic
TTCACTTGGCTGTTAAATTA+GGG 0.214370 1_1:+28688566 Msa0017320:CDS
CTTCAGACACTTACAAGATT+TGG 0.232931 1_1:+28688860 Msa0017320:CDS
TGAAAAGGTGAGCGATTTAT+TGG 0.236609 1_1:+28689611 Msa0017320:CDS
CTCTCCATGCTTGTCTGATC+TGG 0.259849 1_1:+28687885 Msa0017320:five_prime_UTR
GGAAAAGGGGTGCGAATCTA+AGG 0.266382 1_1:+28688881 Msa0017320:CDS
GTGTTGTGCTGCAGCTTAAA+AGG 0.268769 1_1:+28693223 Msa0017320:three_prime_UTR
AAATTATTGTTAACTAGCTT+TGG 0.286774 1_1:+28693440 Msa0017320:three_prime_UTR
AAATCAAAACTTTATCCAAT+AGG 0.292042 1_1:-28688226 None:intergenic
TGTCTAAAACAAATATATTT+AGG 0.297109 1_1:+28689112 Msa0017320:CDS
CTTTGAAGTAGGAAACAAAA+AGG 0.311010 1_1:-28687937 None:intergenic
CAATTCCACCAGATTATACT+TGG 0.314172 1_1:+28693041 Msa0017320:CDS
AAGGATTGAGGCCTATTCTT+TGG 0.316054 1_1:+28689799 Msa0017320:CDS
ATCCATCCCTTGTGCTGTTT+AGG 0.317424 1_1:+28688322 Msa0017320:five_prime_UTR
GGGATTGATGTTGCAAAGTT+TGG 0.320650 1_1:+28688352 Msa0017320:CDS
AATCCAACCAGCACTGAAAA+AGG 0.327215 1_1:-28688182 None:intergenic
ATCTTGGTTTCAGTGGATAA+AGG 0.328101 1_1:+28692946 Msa0017320:CDS
GAGCAAGCACTGACCTTAAC+AGG 0.333513 1_1:-28689948 None:intergenic
CAATTGCCTTCTTTCATCTT+CGG 0.347048 1_1:-28689358 None:intergenic
TTGGGTATTAATCATTTCAT+TGG 0.351047 1_1:+28687978 Msa0017320:five_prime_UTR
CTGTGATACCTTTCATTTCA+AGG 0.359358 1_1:+28688830 Msa0017320:CDS
TAGAAGCTGCCATATTTGTT+TGG 0.360904 1_1:+28693166 Msa0017320:three_prime_UTR
AATCAAAACTTTATCCAATA+GGG 0.365910 1_1:-28688225 None:intergenic
CAAGTTTGTGGTGACCCTAT+TGG 0.373629 1_1:+28688211 Msa0017320:five_prime_UTR
GCATTATCAGCCTCTGGCTT+GGG 0.378131 1_1:+28688717 Msa0017320:CDS
GCTGAAATGCTTATGGTTGT+TGG 0.381013 1_1:+28688601 Msa0017320:CDS
AATTATTGTTAACTAGCTTT+GGG 0.381544 1_1:+28693441 Msa0017320:three_prime_UTR
AGAATTTACAGAAGAAGCTT+TGG 0.383345 1_1:-28689724 None:intergenic
TCTACGCAAAGAGAACTTCT+TGG 0.388331 1_1:-28689588 None:intergenic
CAAATTTCTCAGCTTCATCT+TGG 0.390368 1_1:+28692930 Msa0017320:CDS
CAATCTCTGCTGTGATTGAT+AGG 0.391403 1_1:+28688515 Msa0017320:CDS
CTACCGTTACCATCTTCAAT+AGG 0.394559 1_1:-28689468 None:intergenic
GAAAAGGTGAGCGATTTATT+GGG 0.399396 1_1:+28689612 Msa0017320:CDS
GGTGGAATTGCAAACGGGTC+TGG 0.404701 1_1:-28693028 None:intergenic
ATAAAATCTAGAGGAGTTCC+TGG 0.407650 1_1:+28689258 Msa0017320:CDS
TGGTCATAGTCCTGTTCATA+AGG 0.411108 1_1:+28688372 Msa0017320:CDS
AGGATTATGGTGAGCTTAAG+AGG 0.411282 1_1:+28688407 Msa0017320:CDS
CACTTACAAGATTTGGAAAA+GGG 0.421955 1_1:+28688867 Msa0017320:CDS
CCTGACATGGATGGACTTGT+TGG 0.422111 1_1:-28692887 None:intergenic
AGGGCTGACATGACTTTGGC+TGG 0.422895 1_1:+28688901 Msa0017320:CDS
TTATGGTTGTTGGTGCTGAT+TGG 0.422928 1_1:+28688611 Msa0017320:CDS
TTCTCTTTGCGTAGATGAAA+AGG 0.429956 1_1:+28689596 Msa0017320:CDS
GTGTAGAAGGTTGCCTCGTT+TGG 0.430443 1_1:+28688747 Msa0017320:CDS
AAACAGAAATGGTAGGATCT+TGG 0.430531 1_1:+28689196 Msa0017320:CDS
GGTGAGCTTAAGAGGATACT+TGG 0.431434 1_1:+28688415 Msa0017320:CDS
CATGCTTGTCTGATCTGGAT+TGG 0.431711 1_1:+28687890 Msa0017320:five_prime_UTR
CTTGGTGATGGTTCAGAGGA+TGG 0.433039 1_1:+28688970 Msa0017320:CDS
AGCCTCTGGCTTGGGCGAAA+TGG 0.434814 1_1:+28688725 Msa0017320:CDS
TATTAAGCATTATCAGCCTC+TGG 0.435561 1_1:+28688711 Msa0017320:CDS
TTGTGCTGTTTAGGTATGGC+AGG 0.436450 1_1:+28688331 Msa0017320:exon
GCTGAGAAATTTGTCGCTGC+AGG 0.436837 1_1:-28692920 None:intergenic
CAGCTTCATCTTGGTTTCAG+TGG 0.438126 1_1:+28692939 Msa0017320:CDS
AAAATCACAGCCTTATGAAC+AGG 0.440620 1_1:-28688382 None:intergenic
CGAAGATGAAAGAAGGCAAT+TGG 0.443916 1_1:+28689359 Msa0017320:CDS
TTGTGATTGTTAGTGTTGGT+TGG 0.452258 1_1:+28688278 Msa0017320:five_prime_UTR
ACACTTACAAGATTTGGAAA+AGG 0.454221 1_1:+28688866 Msa0017320:CDS
TGGATTATTCTGCAAGTTTG+TGG 0.455880 1_1:+28688199 Msa0017320:five_prime_UTR
GGTTTAATCTGATTATTTGA+AGG 0.456077 1_1:-28689642 None:intergenic
AGAGACATTCCTATTGAAGA+TGG 0.456127 1_1:+28689459 Msa0017320:CDS
TCCCTTGTGCTGTTTAGGTA+TGG 0.456844 1_1:+28688327 Msa0017320:exon
GAGAAGAACAAATCAAAGAA+AGG 0.457216 1_1:+28693097 Msa0017320:CDS
ATAATGCTTAATAATGATCT+TGG 0.457513 1_1:-28688701 None:intergenic
TCAGTTGACTTGGAGGCGCC+AGG 0.458205 1_1:+28689170 Msa0017320:CDS
GAAAATAAGCAGGAAAAGAA+AGG 0.458780 1_1:+28689501 Msa0017320:CDS
AGCATTATCAGCCTCTGGCT+TGG 0.461466 1_1:+28688716 Msa0017320:CDS
ATCGTTAAGTTCTTCACTCT+CGG 0.461882 1_1:-28689328 None:intergenic
TGAGATCATGCAGAGTGATC+CGG 0.463016 1_1:-28689004 None:intergenic
TTTGGAAAAGTCATAAAGCT+AGG 0.465645 1_1:+28693184 Msa0017320:three_prime_UTR
TTTGCAACAATGTCAAGTAA+TGG 0.466040 1_1:-28689861 None:intergenic
AGTGGCTGCTGAAATGCTTA+TGG 0.466309 1_1:+28688594 Msa0017320:CDS
AGAAAGGATGGTTTGGTGGA+TGG 0.466730 1_1:+28689517 Msa0017320:CDS
GGGATTATAACCTTTGAAGT+AGG 0.468247 1_1:-28687948 None:intergenic
ATTGGAGGATGCACTTAAGC+TGG 0.468456 1_1:+28689377 Msa0017320:CDS
GATGGTAACGGTAGCAATAG+TGG 0.470448 1_1:+28689477 Msa0017320:CDS
CAGGAAAAGAAAGGATGGTT+TGG 0.470506 1_1:+28689510 Msa0017320:CDS
GAACCTGCAGCAGATGAACT+AGG 0.474066 1_1:-28692980 None:intergenic
GTGATTGTGATTGTTAGTGT+TGG 0.474734 1_1:+28688274 Msa0017320:five_prime_UTR
ACTTACAACAAAACTTCCAA+TGG 0.475435 1_1:+28689917 Msa0017320:CDS
AGAAGAACAAATCAAAGAAA+GGG 0.475808 1_1:+28693098 Msa0017320:CDS
CGCCCTAGTTCATCTGCTGC+AGG 0.477336 1_1:+28692977 Msa0017320:CDS
TAATCTGGTGGAATTGCAAA+CGG 0.477515 1_1:-28693034 None:intergenic
ACTCTGATGGTGGGAACCAC+AGG 0.479198 1_1:-28692806 None:intergenic
ATGACTTTGGCTGGTTTCGA+CGG 0.483089 1_1:+28688910 Msa0017320:CDS
CATGATCTCACACAAGGAAA+AGG 0.485210 1_1:+28689017 Msa0017320:CDS
CGTGAAAATGAATATAAGAA+AGG 0.486287 1_1:+28689780 Msa0017320:CDS
TATTTACAACAATAAAATCA+AGG 0.488975 1_1:-28693412 None:intergenic
ATAGGAATGTCTCTAAAGCT+TGG 0.492744 1_1:-28689450 None:intergenic
CTTACAACAAAACTTCCAAT+GGG 0.493342 1_1:+28689918 Msa0017320:CDS
CTGCAGGTTCCAGCAGTAGT+AGG 0.495341 1_1:+28692993 Msa0017320:CDS
CTTGGGCGAAATGGTGTAGA+AGG 0.495564 1_1:+28688734 Msa0017320:CDS
CTCTCTTCGCCTGACATGGA+TGG 0.499410 1_1:-28692896 None:intergenic
TTCTGTTGAGGTTGTTGTGA+GGG 0.502579 1_1:+28689674 Msa0017320:CDS
ATATGGCAGCTTCTATTCAA+TGG 0.502947 1_1:-28693158 None:intergenic
GCAGTGACCCAAGTATAATC+TGG 0.510448 1_1:-28693049 None:intergenic
TCTAAGGGCTGACATGACTT+TGG 0.515499 1_1:+28688897 Msa0017320:CDS
TTGGTGATGGTTCAGAGGAT+GGG 0.516406 1_1:+28688971 Msa0017320:CDS
GGGTGAGATTCGTACGGAAG+CGG 0.516999 1_1:+28688462 Msa0017320:CDS
GTGAGCTTAAGAGGATACTT+GGG 0.519970 1_1:+28688416 Msa0017320:CDS
TTTACCTAAGCTGTGTAATG+TGG 0.520667 1_1:+28688441 Msa0017320:CDS
AAGCTGCAGCACAACACCAT+TGG 0.520683 1_1:-28693217 None:intergenic
GCAGATGAACTAGGGCGGTA+TGG 0.522475 1_1:-28692971 None:intergenic
AATCTGGTGGAATTGCAAAC+GGG 0.523683 1_1:-28693033 None:intergenic
CCAACAAGTCCATCCATGTC+AGG 0.528362 1_1:+28692887 Msa0017320:CDS
GCCTGGTATTGATGTTACTC+AGG 0.530031 1_1:+28689134 Msa0017320:CDS
CTGAACAATGATAGTGATGA+GGG 0.531253 1_1:+28689411 Msa0017320:CDS
TCATCGTCTGTCATAGCTCC+AGG 0.531703 1_1:-28689276 None:intergenic
AAAACAAATATATTTAGGCC+TGG 0.531734 1_1:+28689117 Msa0017320:CDS
TCATGCAGAGTGATCCGGGC+TGG 0.533564 1_1:-28688999 None:intergenic
TGAAGAGGAGTATCACGATT+CGG 0.534315 1_1:-28688547 None:intergenic
TTTGGCGAAAGCCAAAGAAT+AGG 0.538222 1_1:-28689810 None:intergenic
AGCAGAAGTCGTCATAAAGA+TGG 0.538908 1_1:+28689753 Msa0017320:CDS
ACCTCAACAGAATGTCTCCC+TGG 0.545970 1_1:-28689663 None:intergenic
TTAACAGGAAAAGTTCCCAT+TGG 0.546615 1_1:-28689933 None:intergenic
AGGGCTCTCTTCGCCTGACA+TGG 0.547387 1_1:-28692900 None:intergenic
GAGATCATGCAGAGTGATCC+GGG 0.550659 1_1:-28689003 None:intergenic
GCGCCAGGAGAAAACAGAAA+TGG 0.553288 1_1:+28689185 Msa0017320:CDS
CAAATCTTGTAAGTGTCTGA+AGG 0.555543 1_1:-28688859 None:intergenic
GGTAGGATCTTGGAAAGCTA+AGG 0.558300 1_1:+28689206 Msa0017320:CDS
TACCTAAACAGCACAAGGGA+TGG 0.559050 1_1:-28688324 None:intergenic
TGTGCTGTTTAGGTATGGCA+GGG 0.560479 1_1:+28688332 Msa0017320:exon
GGTTCCCACCATCAGAGTAT+TGG 0.560691 1_1:+28692811 Msa0017320:CDS
GAAAAGAAAGGATGGTTTGG+TGG 0.562638 1_1:+28689513 Msa0017320:CDS
ATAAGCAGGAAAAGAAAGGA+TGG 0.566965 1_1:+28689505 Msa0017320:CDS
AGATGAAAGAAGGCAATTGG+AGG 0.568053 1_1:+28689362 Msa0017320:CDS
GACATGGATGGACTTGTTGG+CGG 0.572596 1_1:-28692884 None:intergenic
TTGTGAGGGGCGATGAGCAA+CGG 0.572804 1_1:+28689688 Msa0017320:CDS
TATTCAGGTTGCCATTCCTG+TGG 0.573026 1_1:+28692790 Msa0017320:intron
TCACTTGGCTGTTAAATTAG+GGG 0.574791 1_1:+28688567 Msa0017320:CDS
TCAAATAATCAGATTAAACC+AGG 0.576252 1_1:+28689645 Msa0017320:CDS
GGTGTTGCGAATTCATCTAA+TGG 0.576273 1_1:-28692863 None:intergenic
AGTGACCAATACTCTGATGG+TGG 0.577816 1_1:-28692816 None:intergenic
CTGATCTGGATTGGATCACA+AGG 0.578500 1_1:+28687899 Msa0017320:five_prime_UTR
TCACCCACATTACACAGCTT+AGG 0.579319 1_1:-28688445 None:intergenic
CGCATCGTCGCTACCAAACG+AGG 0.579484 1_1:-28688760 None:intergenic
CTGAGAAATTTGTCGCTGCA+GGG 0.579531 1_1:-28692919 None:intergenic
GATGGTGGGAACCACAGGAA+TGG 0.580921 1_1:-28692801 None:intergenic
AAAGAGAGAAACCCCACCAA+AGG 0.581628 1_1:-28687728 None:intergenic
TGGAGTTTGCAGAATGAACA+AGG 0.585411 1_1:+28688631 Msa0017320:CDS
GCTAGGATTTGATTCTCCAA+TGG 0.585418 1_1:+28693201 Msa0017320:three_prime_UTR
CAATAGTGGAGAAAATAAGC+AGG 0.586148 1_1:+28689491 Msa0017320:CDS
AACCTGCAGCAGATGAACTA+GGG 0.586365 1_1:-28692979 None:intergenic
ATTTACAACAATAAAATCAA+GGG 0.591541 1_1:-28693411 None:intergenic
TGCCATACCTAAACAGCACA+AGG 0.592296 1_1:-28688329 None:intergenic
TCGTGATACTCCTCTTCACT+TGG 0.594632 1_1:+28688552 Msa0017320:CDS
CACCATTTCGCCCAAGCCAG+AGG 0.595905 1_1:-28688727 None:intergenic
GGTGCAATCCTTGAAATGAA+AGG 0.596454 1_1:-28688838 None:intergenic
TCTGTTGAGGTTGTTGTGAG+GGG 0.602480 1_1:+28689675 Msa0017320:CDS
TCATTTCATTGGACAAACCA+AGG 0.603813 1_1:+28687989 Msa0017320:five_prime_UTR
AATTTAACAGCCAAGTGAAG+AGG 0.606406 1_1:-28688562 None:intergenic
ACGCAAAGAGAACTTCTTGG+TGG 0.607111 1_1:-28689585 None:intergenic
AATTCCACCAGATTATACTT+GGG 0.608111 1_1:+28693042 Msa0017320:CDS
ATTCTGTTGAGGTTGTTGTG+AGG 0.608833 1_1:+28689673 Msa0017320:CDS
TGTTGTGCTGCAGCTTAAAA+GGG 0.611876 1_1:+28693224 Msa0017320:three_prime_UTR
ATGAATATAAGAAAGGATTG+AGG 0.612683 1_1:+28689787 Msa0017320:CDS
GTTGTAAGTATAAAATCTAG+AGG 0.612791 1_1:+28689249 Msa0017320:CDS
ACCAGGGAGACATTCTGTTG+AGG 0.613862 1_1:+28689662 Msa0017320:CDS
GAAAAGGGGTGCGAATCTAA+GGG 0.614309 1_1:+28688882 Msa0017320:CDS
CTCGTTTGGTAGCGACGATG+CGG 0.615725 1_1:+28688761 Msa0017320:CDS
CAATCCAGATCAGACAAGCA+TGG 0.617432 1_1:-28687889 None:intergenic
ACTGAACAATGATAGTGATG+AGG 0.620972 1_1:+28689410 Msa0017320:CDS
ATGATCTCACTTCACTTCAG+TGG 0.621864 1_1:+28693135 Msa0017320:exon
TTACCTAAGCTGTGTAATGT+GGG 0.623380 1_1:+28688442 Msa0017320:CDS
GAGGATGGGAAAGTCCAGCC+CGG 0.628594 1_1:+28688985 Msa0017320:CDS
GTTTGGTAGCGACGATGCGG+AGG 0.629098 1_1:+28688764 Msa0017320:CDS
GTGACCCAAGTATAATCTGG+TGG 0.630524 1_1:-28693046 None:intergenic
GCCTGAGTAACATCAATACC+AGG 0.632873 1_1:-28689135 None:intergenic
GTGACCAATACTCTGATGGT+GGG 0.634458 1_1:-28692815 None:intergenic
CAGGAGAAAACAGAAATGGT+AGG 0.637085 1_1:+28689189 Msa0017320:CDS
GTTTGCAGAATGAACAAGGG+TGG 0.641695 1_1:+28688635 Msa0017320:CDS
TGAGCTTAAGAGGATACTTG+GGG 0.641820 1_1:+28688417 Msa0017320:CDS
ATTCCTATTGAAGATGGTAA+CGG 0.643760 1_1:+28689465 Msa0017320:CDS
TGAGGGGCGATGAGCAACGG+AGG 0.648943 1_1:+28689691 Msa0017320:CDS
ACTTACAAGATTTGGAAAAG+GGG 0.652824 1_1:+28688868 Msa0017320:CDS
TGGCGCCTCCAAGTCAACTG+AGG 0.653180 1_1:-28689168 None:intergenic
GATCTCACACAAGGAAAAGG+AGG 0.660308 1_1:+28689020 Msa0017320:CDS
TGTTAAATTAGGGGATGAAG+TGG 0.665433 1_1:+28688576 Msa0017320:CDS
AAAAGTGACCAATACTCTGA+TGG 0.668899 1_1:-28692819 None:intergenic
TAATGTGGGTGAGATTCGTA+CGG 0.669654 1_1:+28688456 Msa0017320:CDS
TTAAAAGGGATGAAACATTG+TGG 0.670417 1_1:+28693238 Msa0017320:three_prime_UTR
CAAATAATCAGATTAAACCA+GGG 0.677591 1_1:+28689646 Msa0017320:CDS
GGAGTTTGCAGAATGAACAA+GGG 0.699547 1_1:+28688632 Msa0017320:CDS
GAGCTTAAGAGGATACTTGG+GGG 0.708775 1_1:+28688418 Msa0017320:CDS
TGAACAATGATAGTGATGAG+GGG 0.712496 1_1:+28689412 Msa0017320:CDS
CTGCAGCAGATGAACTAGGG+CGG 0.715429 1_1:-28692976 None:intergenic
ACTCTGCATGATCTCACACA+AGG 0.718060 1_1:+28689011 Msa0017320:CDS
GCCATACCTAAACAGCACAA+GGG 0.724512 1_1:-28688328 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATAAATAATAAAAAA+GGG - chr1_1:28687799-28687818 None:intergenic 0.0%
!! TATTAAATAAATAATAAAAA+AGG - chr1_1:28687800-28687819 None:intergenic 0.0%
!!! TTTTTATTGCTTTAAATAAT+TGG + chr1_1:28691521-28691540 Msa0017320:intron 10.0%
!!! TTTTTTCTATTTTACTATAA+GGG + chr1_1:28692336-28692355 Msa0017320:intron 10.0%
!! AAATAATAAAAAAGGGAAAT+TGG - chr1_1:28687792-28687811 None:intergenic 15.0%
!!! TGTCTAAAACAAATATATTT+AGG + chr1_1:28689112-28689131 Msa0017320:CDS 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - chr1_1:28690167-28690186 None:intergenic 15.0%
!! GAATATAATTAATCATGTTT+CGG + chr1_1:28690195-28690214 Msa0017320:intron 15.0%
!! ATAGTAAAATAGAAAAAAGA+TGG - chr1_1:28692334-28692353 None:intergenic 15.0%
!!! CTTTTTTCTATTTTACTATA+AGG + chr1_1:28692335-28692354 Msa0017320:intron 15.0%
!! ATTTACAACAATAAAATCAA+GGG - chr1_1:28693414-28693433 None:intergenic 15.0%
!! TATTTACAACAATAAAATCA+AGG - chr1_1:28693415-28693434 None:intergenic 15.0%
!!! TTGGTTTTTTTGGTTTATTT+AGG + chr1_1:28688144-28688163 Msa0017320:intron 20.0%
!!! TTTTGGTTTATTTAGGTTTT+TGG + chr1_1:28688151-28688170 Msa0017320:intron 20.0%
!!! TTTGGTTTATTTAGGTTTTT+GGG + chr1_1:28688152-28688171 Msa0017320:intron 20.0%
!! AATCAAAACTTTATCCAATA+GGG - chr1_1:28688228-28688247 None:intergenic 20.0%
!! AAATCAAAACTTTATCCAAT+AGG - chr1_1:28688229-28688248 None:intergenic 20.0%
!! ATAATGCTTAATAATGATCT+TGG - chr1_1:28688704-28688723 None:intergenic 20.0%
!!! TCAATTTTTAATGGAAAGTT+TGG - chr1_1:28689831-28689850 None:intergenic 20.0%
!!! AAGAGTTCTTCAATTTTTAA+TGG - chr1_1:28689840-28689859 None:intergenic 20.0%
!!! ACTAACAATATGAATTTTCT+GGG + chr1_1:28689995-28690014 Msa0017320:intron 20.0%
!!! ATTTTCTCAAATTATTATCG+GGG - chr1_1:28690165-28690184 None:intergenic 20.0%
!!! CATTTTCTCAAATTATTATC+GGG - chr1_1:28690166-28690185 None:intergenic 20.0%
!!! TCTAATTAGCTTGAATTTTA+TGG + chr1_1:28690659-28690678 Msa0017320:intron 20.0%
!! CAATACTAAATACAAATGTA+GGG - chr1_1:28690756-28690775 None:intergenic 20.0%
!! TTCTATCCAATCATAATTAA+TGG - chr1_1:28690799-28690818 None:intergenic 20.0%
!! AAAAAAAAAAAAATCCCACA+GGG - chr1_1:28690957-28690976 None:intergenic 20.0%
!! AAAAAAAAAAAAAATCCCAC+AGG - chr1_1:28690958-28690977 None:intergenic 20.0%
!!! GTTTGTTTCTTTTGTATTTT+TGG + chr1_1:28690988-28691007 Msa0017320:intron 20.0%
!!! TTTTGTATTTTTGGATACAA+GGG + chr1_1:28690997-28691016 Msa0017320:intron 20.0%
!! TTATAAAATAGATATACTCC+AGG + chr1_1:28691269-28691288 Msa0017320:intron 20.0%
!! TATAAAATAGATATACTCCA+GGG + chr1_1:28691270-28691289 Msa0017320:intron 20.0%
!! AATGTGGTATTAATTGAATA+GGG - chr1_1:28691737-28691756 None:intergenic 20.0%
!! TAATGTGGTATTAATTGAAT+AGG - chr1_1:28691738-28691757 None:intergenic 20.0%
!! ATGAACTATAAGTTATAATG+TGG - chr1_1:28691753-28691772 None:intergenic 20.0%
!!! GTTTTTGTAAAAAAAAGTCT+AGG + chr1_1:28691820-28691839 Msa0017320:intron 20.0%
!! CAAAGATTCTATTAATTATG+TGG - chr1_1:28692070-28692089 None:intergenic 20.0%
!!! AGATTTAATCCCTATAATTT+TGG + chr1_1:28692197-28692216 Msa0017320:intron 20.0%
!! AAGGAAATTCCAAAATTATA+GGG - chr1_1:28692209-28692228 None:intergenic 20.0%
!! AAAGGAAATTCCAAAATTAT+AGG - chr1_1:28692210-28692229 None:intergenic 20.0%
!! AATAATGAAGAACAGTATAA+AGG - chr1_1:28692228-28692247 None:intergenic 20.0%
!! TCATCTATAAAGAAAGATAT+GGG - chr1_1:28692745-28692764 None:intergenic 20.0%
!! ATCATCTATAAAGAAAGATA+TGG - chr1_1:28692746-28692765 None:intergenic 20.0%
!!! AAATTATTGTTAACTAGCTT+TGG + chr1_1:28693440-28693459 Msa0017320:three_prime_UTR 20.0%
!! TTTGAAGTAGGAAACAAAAA+GGG - chr1_1:28687939-28687958 None:intergenic 25.0%
!! GTTATAATCCCTTGATTTTT+GGG + chr1_1:28687960-28687979 Msa0017320:five_prime_UTR 25.0%
! GATTAATACCCAAAAATCAA+GGG - chr1_1:28687971-28687990 None:intergenic 25.0%
! TGATTAATACCCAAAAATCA+AGG - chr1_1:28687972-28687991 None:intergenic 25.0%
! TTGGGTATTAATCATTTCAT+TGG + chr1_1:28687978-28687997 Msa0017320:five_prime_UTR 25.0%
! ATAAAGTAAGTTACTAACCT+TGG - chr1_1:28688009-28688028 None:intergenic 25.0%
!!! AAGAAAGAAAAGTATCAAGT+GGG - chr1_1:28688064-28688083 None:intergenic 25.0%
!!! AAAGAAAGAAAAGTATCAAG+TGG - chr1_1:28688065-28688084 None:intergenic 25.0%
! TCTCATTCTAAATTGCTAAA+TGG + chr1_1:28688115-28688134 Msa0017320:intron 25.0%
! CTCATTCTAAATTGCTAAAT+GGG + chr1_1:28688116-28688135 Msa0017320:intron 25.0%
!!! TTTATTTAGGTTTTTGGGAT+AGG + chr1_1:28688157-28688176 Msa0017320:intron 25.0%
! AAAACAAATATATTTAGGCC+TGG + chr1_1:28689117-28689136 Msa0017320:CDS 25.0%
! GTTGTAAGTATAAAATCTAG+AGG + chr1_1:28689249-28689268 Msa0017320:CDS 25.0%
! GGTTTAATCTGATTATTTGA+AGG - chr1_1:28689645-28689664 None:intergenic 25.0%
! TCAAATAATCAGATTAAACC+AGG + chr1_1:28689645-28689664 Msa0017320:CDS 25.0%
! CAAATAATCAGATTAAACCA+GGG + chr1_1:28689646-28689665 Msa0017320:CDS 25.0%
! CGTGAAAATGAATATAAGAA+AGG + chr1_1:28689780-28689799 Msa0017320:CDS 25.0%
! ATGAATATAAGAAAGGATTG+AGG + chr1_1:28689787-28689806 Msa0017320:CDS 25.0%
!! CACTAACAATATGAATTTTC+TGG + chr1_1:28689994-28690013 Msa0017320:intron 25.0%
! GTCTACAAATCATCATTATT+CGG + chr1_1:28690461-28690480 Msa0017320:intron 25.0%
! TTCAAGCTAATTAGATGAAA+TGG - chr1_1:28690654-28690673 None:intergenic 25.0%
! CTCTCTATTTAAGCTTATTA+AGG - chr1_1:28690693-28690712 None:intergenic 25.0%
! GCAATACTAAATACAAATGT+AGG - chr1_1:28690757-28690776 None:intergenic 25.0%
! TAATTAATGGAAAGTGAAAC+AGG - chr1_1:28690786-28690805 None:intergenic 25.0%
! CACTTTCCATTAATTATGAT+TGG + chr1_1:28690790-28690809 Msa0017320:intron 25.0%
!! ATCCTTTTACCTTATCAAAA+TGG + chr1_1:28690818-28690837 Msa0017320:intron 25.0%
!! TCCTTTTACCTTATCAAAAT+GGG + chr1_1:28690819-28690838 Msa0017320:intron 25.0%
! AAAAAAAAAAAATCCCACAG+GGG - chr1_1:28690956-28690975 None:intergenic 25.0%
!!! CTTTTGTATTTTTGGATACA+AGG + chr1_1:28690996-28691015 Msa0017320:intron 25.0%
!! TTTTAATCCAGACAATATTC+TGG - chr1_1:28691077-28691096 None:intergenic 25.0%
! CAAAAATTTCGGTAATAAGT+GGG - chr1_1:28691140-28691159 None:intergenic 25.0%
! ACAAAAATTTCGGTAATAAG+TGG - chr1_1:28691141-28691160 None:intergenic 25.0%
! TGACGAAGTAACAAAAATTT+CGG - chr1_1:28691151-28691170 None:intergenic 25.0%
!!! TTTTTGTTACTTCGTCATAT+TGG + chr1_1:28691154-28691173 Msa0017320:intron 25.0%
!! AGTTGTTTCAGAAGAATAAA+AGG - chr1_1:28691246-28691265 None:intergenic 25.0%
!! TTTTACATTACAAAATACCC+TGG - chr1_1:28691290-28691309 None:intergenic 25.0%
! AACAGGATATTATTACACAT+TGG - chr1_1:28691595-28691614 None:intergenic 25.0%
! TGTGTAATAATATCCTGTTA+AGG + chr1_1:28691596-28691615 Msa0017320:intron 25.0%
!!! ACCTTTTATTTCTCAAGTAT+AGG + chr1_1:28691792-28691811 Msa0017320:intron 25.0%
! ACCTATACTTGAGAAATAAA+AGG - chr1_1:28691796-28691815 None:intergenic 25.0%
! AAAACGAAATCAAATCACAA+AGG - chr1_1:28691914-28691933 None:intergenic 25.0%
! TTCTATTAATTATGTGGCAA+AGG - chr1_1:28692064-28692083 None:intergenic 25.0%
! CAGAGATATAGACATAAATA+GGG - chr1_1:28692107-28692126 None:intergenic 25.0%
! TCAGAGATATAGACATAAAT+AGG - chr1_1:28692108-28692127 None:intergenic 25.0%
! TATCTCTGATGTATGTAATT+AGG + chr1_1:28692119-28692138 Msa0017320:intron 25.0%
! AATATGTAGACTTGAGAATA+AGG - chr1_1:28692301-28692320 None:intergenic 25.0%
! TCATTGACATTGATAAGTTT+GGG - chr1_1:28692382-28692401 None:intergenic 25.0%
! ATCATTGACATTGATAAGTT+TGG - chr1_1:28692383-28692402 None:intergenic 25.0%
!!! TTTTAGTTTAGGACAAAAGA+TGG + chr1_1:28692512-28692531 Msa0017320:intron 25.0%
!! TTTAGTTTAGGACAAAAGAT+GGG + chr1_1:28692513-28692532 Msa0017320:intron 25.0%
! ACATATCAAGAATGTTTAGA+AGG - chr1_1:28692586-28692605 None:intergenic 25.0%
! TTCTAAACATTCTTGATATG+TGG + chr1_1:28692585-28692604 Msa0017320:intron 25.0%
! AGTGAAAAAACACAAAAAGA+GGG - chr1_1:28692710-28692729 None:intergenic 25.0%
! AGAAGAACAAATCAAAGAAA+GGG + chr1_1:28693098-28693117 Msa0017320:CDS 25.0%
!! ATGACTTTTCCAAACAAATA+TGG - chr1_1:28693178-28693197 None:intergenic 25.0%
!! CTTTGAAGTAGGAAACAAAA+AGG - chr1_1:28687940-28687959 None:intergenic 30.0%
!! CTTTTTGTTTCCTACTTCAA+AGG + chr1_1:28687938-28687957 Msa0017320:five_prime_UTR 30.0%
! GGTTATAATCCCTTGATTTT+TGG + chr1_1:28687959-28687978 Msa0017320:five_prime_UTR 30.0%
!! AGAAAGAAAAGTATCAAGTG+GGG - chr1_1:28688063-28688082 None:intergenic 30.0%
! AATTGCTAAATGGGTCATTT+TGG + chr1_1:28688125-28688144 Msa0017320:intron 30.0%
!!! ATGGGTCATTTTGGTTTTTT+TGG + chr1_1:28688134-28688153 Msa0017320:intron 30.0%
TTCACTTGGCTGTTAAATTA+GGG + chr1_1:28688566-28688585 Msa0017320:CDS 30.0%
ACACTTACAAGATTTGGAAA+AGG + chr1_1:28688866-28688885 Msa0017320:CDS 30.0%
CACTTACAAGATTTGGAAAA+GGG + chr1_1:28688867-28688886 Msa0017320:CDS 30.0%
ACTTACAAGATTTGGAAAAG+GGG + chr1_1:28688868-28688887 Msa0017320:CDS 30.0%
!! GATCAAAGTGTTCTTTTTCT+TGG + chr1_1:28688952-28688971 Msa0017320:CDS 30.0%
ATTCCTATTGAAGATGGTAA+CGG + chr1_1:28689465-28689484 Msa0017320:CDS 30.0%
GAAAATAAGCAGGAAAAGAA+AGG + chr1_1:28689501-28689520 Msa0017320:CDS 30.0%
AGAATTTACAGAAGAAGCTT+TGG - chr1_1:28689727-28689746 None:intergenic 30.0%
TTTGCAACAATGTCAAGTAA+TGG - chr1_1:28689864-28689883 None:intergenic 30.0%
ACTTACAACAAAACTTCCAA+TGG + chr1_1:28689917-28689936 Msa0017320:CDS 30.0%
CTTACAACAAAACTTCCAAT+GGG + chr1_1:28689918-28689937 Msa0017320:CDS 30.0%
! GTAACAAGCAAGAGTATAAT+TGG - chr1_1:28690072-28690091 None:intergenic 30.0%
CAAGAAATAGACAGAGAAAA+GGG + chr1_1:28690326-28690345 Msa0017320:intron 30.0%
AAGAAATAGACAGAGAAAAG+GGG + chr1_1:28690327-28690346 Msa0017320:intron 30.0%
AAGCTAATTAGATGAAATGG+AGG - chr1_1:28690651-28690670 None:intergenic 30.0%
!! TCCCATTTTGATAAGGTAAA+AGG - chr1_1:28690823-28690842 None:intergenic 30.0%
! TAGTGGACAAATGAATATTC+TGG - chr1_1:28691043-28691062 None:intergenic 30.0%
TAAAAGGAGAGGTAAATACA+TGG - chr1_1:28691230-28691249 None:intergenic 30.0%
TTTCAGAAGAATAAAAGGAG+AGG - chr1_1:28691241-28691260 None:intergenic 30.0%
TCGAAGTTTCTTTCTTGTAT+TGG + chr1_1:28691398-28691417 Msa0017320:intron 30.0%
CGAAGTTTCTTTCTTGTATT+GGG + chr1_1:28691399-28691418 Msa0017320:intron 30.0%
CCATATAATATCACCTTAAC+AGG - chr1_1:28691612-28691631 None:intergenic 30.0%
CCTGTTAAGGTGATATTATA+TGG + chr1_1:28691609-28691628 Msa0017320:intron 30.0%
!!! CTAGGTATTAGTTTTGCTTT+AGG + chr1_1:28691838-28691857 Msa0017320:intron 30.0%
! TTTCGTTTTCAACAACCATT+TGG + chr1_1:28691925-28691944 Msa0017320:intron 30.0%
CTAACTTACAAATCACCAAA+TGG - chr1_1:28691943-28691962 None:intergenic 30.0%
! CATTTGGTGATTTGTAAGTT+AGG + chr1_1:28691941-28691960 Msa0017320:intron 30.0%
!!! TTTTGTTGTTTAAGCTCTTG+AGG + chr1_1:28692029-28692048 Msa0017320:intron 30.0%
TGATGCAACTAGATAGATAT+AGG + chr1_1:28692172-28692191 Msa0017320:intron 30.0%
TCAATGATCAGAAACTTTGT+TGG + chr1_1:28692395-28692414 Msa0017320:intron 30.0%
!!! GGTCTTATTGGTTTTAGTTT+AGG + chr1_1:28692501-28692520 Msa0017320:intron 30.0%
! AGGAATGAGGTTTAATTTCA+AGG - chr1_1:28692566-28692585 None:intergenic 30.0%
AAGAATGTTTAGAAGGAATG+AGG - chr1_1:28692579-28692598 None:intergenic 30.0%
! TTTCAATGCATTTTTCCATG+TGG + chr1_1:28692656-28692675 Msa0017320:intron 30.0%
AATTCCACCAGATTATACTT+GGG + chr1_1:28693042-28693061 Msa0017320:CDS 30.0%
GAGAAGAACAAATCAAAGAA+AGG + chr1_1:28693097-28693116 Msa0017320:CDS 30.0%
TTTGGAAAAGTCATAAAGCT+AGG + chr1_1:28693184-28693203 Msa0017320:three_prime_UTR 30.0%
TTAAAAGGGATGAAACATTG+TGG + chr1_1:28693238-28693257 Msa0017320:three_prime_UTR 30.0%
TGCAACTATAGTTGAGTTAA+TGG - chr1_1:28693312-28693331 None:intergenic 30.0%
!! GGGATTATAACCTTTGAAGT+AGG - chr1_1:28687951-28687970 None:intergenic 35.0%
TCATTTCATTGGACAAACCA+AGG + chr1_1:28687989-28688008 Msa0017320:five_prime_UTR 35.0%
TGGATTATTCTGCAAGTTTG+TGG + chr1_1:28688199-28688218 Msa0017320:five_prime_UTR 35.0%
GTGATTGTGATTGTTAGTGT+TGG + chr1_1:28688274-28688293 Msa0017320:five_prime_UTR 35.0%
!! TTGTGATTGTTAGTGTTGGT+TGG + chr1_1:28688278-28688297 Msa0017320:five_prime_UTR 35.0%
! AAAATCACAGCCTTATGAAC+AGG - chr1_1:28688385-28688404 None:intergenic 35.0%
! TCATAAGGCTGTGATTTTGA+AGG + chr1_1:28688387-28688406 Msa0017320:CDS 35.0%
!! GCTGTGATTTTGAAGGATTA+TGG + chr1_1:28688394-28688413 Msa0017320:CDS 35.0%
TTTACCTAAGCTGTGTAATG+TGG + chr1_1:28688441-28688460 Msa0017320:CDS 35.0%
TTACCTAAGCTGTGTAATGT+GGG + chr1_1:28688442-28688461 Msa0017320:CDS 35.0%
!! TTCGATTTTAGAGGAAGAGA+AGG + chr1_1:28688486-28688505 Msa0017320:CDS 35.0%
AATTTAACAGCCAAGTGAAG+AGG - chr1_1:28688565-28688584 None:intergenic 35.0%
CTTCACTTGGCTGTTAAATT+AGG + chr1_1:28688565-28688584 Msa0017320:CDS 35.0%
TCACTTGGCTGTTAAATTAG+GGG + chr1_1:28688567-28688586 Msa0017320:CDS 35.0%
TGTTAAATTAGGGGATGAAG+TGG + chr1_1:28688576-28688595 Msa0017320:CDS 35.0%
TATTAAGCATTATCAGCCTC+TGG + chr1_1:28688711-28688730 Msa0017320:CDS 35.0%
! GAGGATGAGAGACTTTTATA+TGG + chr1_1:28688783-28688802 Msa0017320:CDS 35.0%
CTGTGATACCTTTCATTTCA+AGG + chr1_1:28688830-28688849 Msa0017320:CDS 35.0%
CAAATCTTGTAAGTGTCTGA+AGG - chr1_1:28688862-28688881 None:intergenic 35.0%
CTTCAGACACTTACAAGATT+TGG + chr1_1:28688860-28688879 Msa0017320:CDS 35.0%
! AGTGTTCTTTTTCTTGGTGA+TGG + chr1_1:28688958-28688977 Msa0017320:CDS 35.0%
AAACAGAAATGGTAGGATCT+TGG + chr1_1:28689196-28689215 Msa0017320:CDS 35.0%
ATAAAATCTAGAGGAGTTCC+TGG + chr1_1:28689258-28689277 Msa0017320:CDS 35.0%
ATCGTTAAGTTCTTCACTCT+CGG - chr1_1:28689331-28689350 None:intergenic 35.0%
! TTTTGACCGAAGATGAAAGA+AGG + chr1_1:28689352-28689371 Msa0017320:CDS 35.0%
CAATTGCCTTCTTTCATCTT+CGG - chr1_1:28689361-28689380 None:intergenic 35.0%
! ACTGAACAATGATAGTGATG+AGG + chr1_1:28689410-28689429 Msa0017320:CDS 35.0%
! CTGAACAATGATAGTGATGA+GGG + chr1_1:28689411-28689430 Msa0017320:CDS 35.0%
! TGAACAATGATAGTGATGAG+GGG + chr1_1:28689412-28689431 Msa0017320:CDS 35.0%
!! ATAGGAATGTCTCTAAAGCT+TGG - chr1_1:28689453-28689472 None:intergenic 35.0%
AGAGACATTCCTATTGAAGA+TGG + chr1_1:28689459-28689478 Msa0017320:CDS 35.0%
! CAATAGTGGAGAAAATAAGC+AGG + chr1_1:28689491-28689510 Msa0017320:CDS 35.0%
ATAAGCAGGAAAAGAAAGGA+TGG + chr1_1:28689505-28689524 Msa0017320:CDS 35.0%
TTCTCTTTGCGTAGATGAAA+AGG + chr1_1:28689596-28689615 Msa0017320:CDS 35.0%
TGAAAAGGTGAGCGATTTAT+TGG + chr1_1:28689611-28689630 Msa0017320:CDS 35.0%
GAAAAGGTGAGCGATTTATT+GGG + chr1_1:28689612-28689631 Msa0017320:CDS 35.0%
TTAACAGGAAAAGTTCCCAT+TGG - chr1_1:28689936-28689955 None:intergenic 35.0%
! AATGGGAACTTTTCCTGTTA+AGG + chr1_1:28689935-28689954 Msa0017320:CDS 35.0%
CATGCATGTTATGAAAAAGC+AGG + chr1_1:28690108-28690127 Msa0017320:intron 35.0%
CATGTTATGAAAAAGCAGGA+CGG + chr1_1:28690112-28690131 Msa0017320:intron 35.0%
ATTAGGAACATGTGGGTAAA+AGG + chr1_1:28690294-28690313 Msa0017320:intron 35.0%
TTAGGAACATGTGGGTAAAA+GGG + chr1_1:28690295-28690314 Msa0017320:intron 35.0%
GCAAGAAATAGACAGAGAAA+AGG + chr1_1:28690325-28690344 Msa0017320:intron 35.0%
GAGAAGATAACAGTACTATG+AGG + chr1_1:28690355-28690374 Msa0017320:intron 35.0%
GAGGAACATAATAGAAGAGT+AGG + chr1_1:28690374-28690393 Msa0017320:intron 35.0%
GCATAAGCTAAAAGTGGTAA+AGG - chr1_1:28690528-28690547 None:intergenic 35.0%
!!! TTGTAGCACCGATGTTTTAT+GGG + chr1_1:28690573-28690592 Msa0017320:intron 35.0%
!! GTTCAACTCCCATTTTGATA+AGG - chr1_1:28690830-28690849 None:intergenic 35.0%
TATATAGTTAATGACCCCTG+TGG + chr1_1:28690939-28690958 Msa0017320:intron 35.0%
ATATAGTTAATGACCCCTGT+GGG + chr1_1:28690940-28690959 Msa0017320:intron 35.0%
AAACAAGAAACAGCAGGAAA+AGG - chr1_1:28691181-28691200 None:intergenic 35.0%
CAAGAAAGAAACTTCGATCA+CGG - chr1_1:28691395-28691414 None:intergenic 35.0%
!! GTCTTTGTGTCACTTTGATT+TGG + chr1_1:28691553-28691572 Msa0017320:intron 35.0%
TACACATTGGTACTCTAGTA+AGG - chr1_1:28691582-28691601 None:intergenic 35.0%
ATACATCTACTTACCTTTCC+TGG + chr1_1:28691634-28691653 Msa0017320:intron 35.0%
TCCTGCATTGTTACTCATTA+AGG + chr1_1:28691668-28691687 Msa0017320:intron 35.0%
TCCTTAATGAGTAACAATGC+AGG - chr1_1:28691672-28691691 None:intergenic 35.0%
AAATCCTTCCTACACATTCT+AGG + chr1_1:28691875-28691894 Msa0017320:intron 35.0%
AATCCTTCCTACACATTCTA+GGG + chr1_1:28691876-28691895 Msa0017320:intron 35.0%
TAGAAAACCCTAGAATGTGT+AGG - chr1_1:28691886-28691905 None:intergenic 35.0%
! GATGTATGTGAAGAGTATGA+TGG - chr1_1:28692467-28692486 None:intergenic 35.0%
TACTCTTCACATACATCTCT+TGG + chr1_1:28692470-28692489 Msa0017320:intron 35.0%
ACTCTTCACATACATCTCTT+GGG + chr1_1:28692471-28692490 Msa0017320:intron 35.0%
!!! GGAGGGTTTTAAAACATCAT+AGG + chr1_1:28692680-28692699 Msa0017320:intron 35.0%
AAAAGTGACCAATACTCTGA+TGG - chr1_1:28692822-28692841 None:intergenic 35.0%
CAAATTTCTCAGCTTCATCT+TGG + chr1_1:28692930-28692949 Msa0017320:CDS 35.0%
ATCTTGGTTTCAGTGGATAA+AGG + chr1_1:28692946-28692965 Msa0017320:CDS 35.0%
! ATTTTCTATCCTACTACTGC+TGG - chr1_1:28693005-28693024 None:intergenic 35.0%
TAATCTGGTGGAATTGCAAA+CGG - chr1_1:28693037-28693056 None:intergenic 35.0%
CAATTCCACCAGATTATACT+TGG + chr1_1:28693041-28693060 Msa0017320:CDS 35.0%
ATATGGCAGCTTCTATTCAA+TGG - chr1_1:28693161-28693180 None:intergenic 35.0%
TAGAAGCTGCCATATTTGTT+TGG + chr1_1:28693166-28693185 Msa0017320:three_prime_UTR 35.0%
!!! ATAGGTACCTTTTTCAGTGC+TGG + chr1_1:28688175-28688194 Msa0017320:five_prime_UTR 40.0%
! AATCCAACCAGCACTGAAAA+AGG - chr1_1:28688185-28688204 None:intergenic 40.0%
GGGATTGATGTTGCAAAGTT+TGG + chr1_1:28688352-28688371 Msa0017320:CDS 40.0%
TGGTCATAGTCCTGTTCATA+AGG + chr1_1:28688372-28688391 Msa0017320:CDS 40.0%
AGGATTATGGTGAGCTTAAG+AGG + chr1_1:28688407-28688426 Msa0017320:CDS 40.0%
GTGAGCTTAAGAGGATACTT+GGG + chr1_1:28688416-28688435 Msa0017320:CDS 40.0%
TGAGCTTAAGAGGATACTTG+GGG + chr1_1:28688417-28688436 Msa0017320:CDS 40.0%
TAATGTGGGTGAGATTCGTA+CGG + chr1_1:28688456-28688475 Msa0017320:CDS 40.0%
CAATCTCTGCTGTGATTGAT+AGG + chr1_1:28688515-28688534 Msa0017320:CDS 40.0%
!! TGAAGAGGAGTATCACGATT+CGG - chr1_1:28688550-28688569 None:intergenic 40.0%
GCTGAAATGCTTATGGTTGT+TGG + chr1_1:28688601-28688620 Msa0017320:CDS 40.0%
!! TTATGGTTGTTGGTGCTGAT+TGG + chr1_1:28688611-28688630 Msa0017320:CDS 40.0%
TGGAGTTTGCAGAATGAACA+AGG + chr1_1:28688631-28688650 Msa0017320:CDS 40.0%
GGAGTTTGCAGAATGAACAA+GGG + chr1_1:28688632-28688651 Msa0017320:CDS 40.0%
GGTGCAATCCTTGAAATGAA+AGG - chr1_1:28688841-28688860 None:intergenic 40.0%
!!! TTTTCTTGGTGATGGTTCAG+AGG + chr1_1:28688966-28688985 Msa0017320:CDS 40.0%
CATGATCTCACACAAGGAAA+AGG + chr1_1:28689017-28689036 Msa0017320:CDS 40.0%
!!! TCTAGATGATGCTGCTTTTG+CGG + chr1_1:28689053-28689072 Msa0017320:CDS 40.0%
! TTCTTTTGCCTCAGTTGACT+TGG + chr1_1:28689160-28689179 Msa0017320:CDS 40.0%
! CTACCATTTCTGTTTTCTCC+TGG - chr1_1:28689191-28689210 None:intergenic 40.0%
CAGGAGAAAACAGAAATGGT+AGG + chr1_1:28689189-28689208 Msa0017320:CDS 40.0%
CGAAGATGAAAGAAGGCAAT+TGG + chr1_1:28689359-28689378 Msa0017320:CDS 40.0%
AGATGAAAGAAGGCAATTGG+AGG + chr1_1:28689362-28689381 Msa0017320:CDS 40.0%
CTACCGTTACCATCTTCAAT+AGG - chr1_1:28689471-28689490 None:intergenic 40.0%
CAGGAAAAGAAAGGATGGTT+TGG + chr1_1:28689510-28689529 Msa0017320:CDS 40.0%
! GAAAAGAAAGGATGGTTTGG+TGG + chr1_1:28689513-28689532 Msa0017320:CDS 40.0%
TCTACGCAAAGAGAACTTCT+TGG - chr1_1:28689591-28689610 None:intergenic 40.0%
ATTCTGTTGAGGTTGTTGTG+AGG + chr1_1:28689673-28689692 Msa0017320:CDS 40.0%
TTCTGTTGAGGTTGTTGTGA+GGG + chr1_1:28689674-28689693 Msa0017320:CDS 40.0%
AGCAGAAGTCGTCATAAAGA+TGG + chr1_1:28689753-28689772 Msa0017320:CDS 40.0%
AAGGATTGAGGCCTATTCTT+TGG + chr1_1:28689799-28689818 Msa0017320:CDS 40.0%
TTTGGCGAAAGCCAAAGAAT+AGG - chr1_1:28689813-28689832 None:intergenic 40.0%
TGCATGCTACAGCATAAGTA+GGG - chr1_1:28690094-28690113 None:intergenic 40.0%
ATGCATGCTACAGCATAAGT+AGG - chr1_1:28690095-28690114 None:intergenic 40.0%
! ACCACCTTAATCTGAAGTGT+CGG + chr1_1:28690235-28690254 Msa0017320:intron 40.0%
ATATCATGCATGCCATGTGT+TGG + chr1_1:28690264-28690283 Msa0017320:intron 40.0%
!! CCTATGGATTAGGAACATGT+GGG + chr1_1:28690287-28690306 Msa0017320:intron 40.0%
ATAGACAGAGAAAAGGGGTA+AGG + chr1_1:28690332-28690351 Msa0017320:intron 40.0%
TAGACAGAGAAAAGGGGTAA+GGG + chr1_1:28690333-28690352 Msa0017320:intron 40.0%
TAGAAGAGTAGGTGTGTTCT+TGG + chr1_1:28690385-28690404 Msa0017320:intron 40.0%
AGAAGAGTAGGTGTGTTCTT+GGG + chr1_1:28690386-28690405 Msa0017320:intron 40.0%
AGCTAAAAGTGGTAAAGGTG+AGG - chr1_1:28690523-28690542 None:intergenic 40.0%
!! AAACATCGGTGCTACAAGTT+GGG - chr1_1:28690570-28690589 None:intergenic 40.0%
!! AAAACATCGGTGCTACAAGT+TGG - chr1_1:28690571-28690590 None:intergenic 40.0%
!!! CTTGTAGCACCGATGTTTTA+TGG + chr1_1:28690572-28690591 Msa0017320:intron 40.0%
! ACCGATGTTTTATGGGTATG+CGG + chr1_1:28690580-28690599 Msa0017320:intron 40.0%
ACCGCATACCCATAAAACAT+CGG - chr1_1:28690584-28690603 None:intergenic 40.0%
TGGGTATGCGGTAAAATTAG+TGG + chr1_1:28690592-28690611 Msa0017320:intron 40.0%
TCTTGCTCCAGAATATTGTC+TGG + chr1_1:28691067-28691086 Msa0017320:intron 40.0%
CAATGCAAACAAGAAACAGC+AGG - chr1_1:28691187-28691206 None:intergenic 40.0%
!! GTGAGTTCTTTTTCACGTAG+AGG + chr1_1:28691335-28691354 Msa0017320:intron 40.0%
!!! CACTCACGAGTTTTGGTTTT+CGG - chr1_1:28691453-28691472 None:intergenic 40.0%
AACCAAAACTCGTGAGTGAA+TGG + chr1_1:28691455-28691474 Msa0017320:intron 40.0%
! TTCCATTCACTCACGAGTTT+TGG - chr1_1:28691460-28691479 None:intergenic 40.0%
AAACCCTAGAATGTGTAGGA+AGG - chr1_1:28691882-28691901 None:intergenic 40.0%
! CAATGCATTTTTCCATGTGG+TGG + chr1_1:28692659-28692678 Msa0017320:intron 40.0%
!!! TTTTAAAACCCTCCACCACA+TGG - chr1_1:28692674-28692693 None:intergenic 40.0%
GTGACTCTTTCTGCATATTC+AGG + chr1_1:28692775-28692794 Msa0017320:intron 40.0%
! GGTGTTGCGAATTCATCTAA+TGG - chr1_1:28692866-28692885 None:intergenic 40.0%
AATCTGGTGGAATTGCAAAC+GGG - chr1_1:28693036-28693055 None:intergenic 40.0%
ATGATCTCACTTCACTTCAG+TGG + chr1_1:28693135-28693154 Msa0017320:exon 40.0%
GCTAGGATTTGATTCTCCAA+TGG + chr1_1:28693201-28693220 Msa0017320:three_prime_UTR 40.0%
TGTTGTGCTGCAGCTTAAAA+GGG + chr1_1:28693224-28693243 Msa0017320:three_prime_UTR 40.0%
CAATCCAGATCAGACAAGCA+TGG - chr1_1:28687892-28687911 None:intergenic 45.0%
CATGCTTGTCTGATCTGGAT+TGG + chr1_1:28687890-28687909 Msa0017320:five_prime_UTR 45.0%
! CTGATCTGGATTGGATCACA+AGG + chr1_1:28687899-28687918 Msa0017320:five_prime_UTR 45.0%
!!! GTACCTTTTTCAGTGCTGGT+TGG + chr1_1:28688179-28688198 Msa0017320:five_prime_UTR 45.0%
CAAGTTTGTGGTGACCCTAT+TGG + chr1_1:28688211-28688230 Msa0017320:five_prime_UTR 45.0%
!! ATCCATCCCTTGTGCTGTTT+AGG + chr1_1:28688322-28688341 Msa0017320:five_prime_UTR 45.0%
TACCTAAACAGCACAAGGGA+TGG - chr1_1:28688327-28688346 None:intergenic 45.0%
!! TCCCTTGTGCTGTTTAGGTA+TGG + chr1_1:28688327-28688346 Msa0017320:exon 45.0%
GCCATACCTAAACAGCACAA+GGG - chr1_1:28688331-28688350 None:intergenic 45.0%
TGCCATACCTAAACAGCACA+AGG - chr1_1:28688332-28688351 None:intergenic 45.0%
!! TTGTGCTGTTTAGGTATGGC+AGG + chr1_1:28688331-28688350 Msa0017320:exon 45.0%
!! TGTGCTGTTTAGGTATGGCA+GGG + chr1_1:28688332-28688351 Msa0017320:exon 45.0%
GGTGAGCTTAAGAGGATACT+TGG + chr1_1:28688415-28688434 Msa0017320:CDS 45.0%
GAGCTTAAGAGGATACTTGG+GGG + chr1_1:28688418-28688437 Msa0017320:CDS 45.0%
TCACCCACATTACACAGCTT+AGG - chr1_1:28688448-28688467 None:intergenic 45.0%
! GGAAGCGGTTTCGATTTTAG+AGG + chr1_1:28688477-28688496 Msa0017320:CDS 45.0%
TCGTGATACTCCTCTTCACT+TGG + chr1_1:28688552-28688571 Msa0017320:CDS 45.0%
AGTGGCTGCTGAAATGCTTA+TGG + chr1_1:28688594-28688613 Msa0017320:CDS 45.0%
GTTTGCAGAATGAACAAGGG+TGG + chr1_1:28688635-28688654 Msa0017320:CDS 45.0%
! GAAAAGGGGTGCGAATCTAA+GGG + chr1_1:28688882-28688901 Msa0017320:CDS 45.0%
TCTAAGGGCTGACATGACTT+TGG + chr1_1:28688897-28688916 Msa0017320:CDS 45.0%
!! ATGACTTTGGCTGGTTTCGA+CGG + chr1_1:28688910-28688929 Msa0017320:CDS 45.0%
!! TTGGTGATGGTTCAGAGGAT+GGG + chr1_1:28688971-28688990 Msa0017320:CDS 45.0%
TGAGATCATGCAGAGTGATC+CGG - chr1_1:28689007-28689026 None:intergenic 45.0%
ACTCTGCATGATCTCACACA+AGG + chr1_1:28689011-28689030 Msa0017320:CDS 45.0%
GATCTCACACAAGGAAAAGG+AGG + chr1_1:28689020-28689039 Msa0017320:CDS 45.0%
!! GCCTGGTATTGATGTTACTC+AGG + chr1_1:28689134-28689153 Msa0017320:CDS 45.0%
GCCTGAGTAACATCAATACC+AGG - chr1_1:28689138-28689157 None:intergenic 45.0%
!!! TTTTGCCTCAGTTGACTTGG+AGG + chr1_1:28689163-28689182 Msa0017320:CDS 45.0%
GGTAGGATCTTGGAAAGCTA+AGG + chr1_1:28689206-28689225 Msa0017320:CDS 45.0%
ATTGGAGGATGCACTTAAGC+TGG + chr1_1:28689377-28689396 Msa0017320:CDS 45.0%
!! GATGGTAACGGTAGCAATAG+TGG + chr1_1:28689477-28689496 Msa0017320:CDS 45.0%
!! AGAAAGGATGGTTTGGTGGA+TGG + chr1_1:28689517-28689536 Msa0017320:CDS 45.0%
ACGCAAAGAGAACTTCTTGG+TGG - chr1_1:28689588-28689607 None:intergenic 45.0%
TCTGTTGAGGTTGTTGTGAG+GGG + chr1_1:28689675-28689694 Msa0017320:CDS 45.0%
! TAACGTGTCGATGTTGTGTC+TGG - chr1_1:28690141-28690160 None:intergenic 45.0%
ACCGACACTTCAGATTAAGG+TGG - chr1_1:28690239-28690258 None:intergenic 45.0%
!! AGCACCGACACTTCAGATTA+AGG - chr1_1:28690242-28690261 None:intergenic 45.0%
CTAATCCATAGGCCAACACA+TGG - chr1_1:28690279-28690298 None:intergenic 45.0%
! CATGTGTTGGCCTATGGATT+AGG + chr1_1:28690277-28690296 Msa0017320:intron 45.0%
!! GCCTATGGATTAGGAACATG+TGG + chr1_1:28690286-28690305 Msa0017320:intron 45.0%
CCCACATGTTCCTAATCCAT+AGG - chr1_1:28690290-28690309 None:intergenic 45.0%
! GCAAGGGCATAAGCTAAAAG+TGG - chr1_1:28690534-28690553 None:intergenic 45.0%
GGGTAGTAAAGAGCTAGCAA+GGG - chr1_1:28690550-28690569 None:intergenic 45.0%
TGGGTAGTAAAGAGCTAGCA+AGG - chr1_1:28690551-28690570 None:intergenic 45.0%
!! TTCTGGAGCAAGAAGAGTAG+TGG - chr1_1:28691060-28691079 None:intergenic 45.0%
GGTAATAAGTGGGAGAGTAG+TGG - chr1_1:28691130-28691149 None:intergenic 45.0%
! GTAGAGGAGTGTGCTTTAAG+AGG + chr1_1:28691351-28691370 Msa0017320:intron 45.0%
GAAGCTACTGAATCCAGGAA+AGG - chr1_1:28691650-28691669 None:intergenic 45.0%
!! ATACATCTCTTGGGCTAGCT+TGG + chr1_1:28692480-28692499 Msa0017320:intron 45.0%
!! TTGGGCTAGCTTGGTCTTAT+TGG + chr1_1:28692489-28692508 Msa0017320:intron 45.0%
! TGCATTTTTCCATGTGGTGG+AGG + chr1_1:28692662-28692681 Msa0017320:intron 45.0%
!! GCATTTTTCCATGTGGTGGA+GGG + chr1_1:28692663-28692682 Msa0017320:intron 45.0%
!! TATTCAGGTTGCCATTCCTG+TGG + chr1_1:28692790-28692809 Msa0017320:intron 45.0%
GTGACCAATACTCTGATGGT+GGG - chr1_1:28692818-28692837 None:intergenic 45.0%
AGTGACCAATACTCTGATGG+TGG - chr1_1:28692819-28692838 None:intergenic 45.0%
CTGAGAAATTTGTCGCTGCA+GGG - chr1_1:28692922-28692941 None:intergenic 45.0%
CAGCTTCATCTTGGTTTCAG+TGG + chr1_1:28692939-28692958 Msa0017320:CDS 45.0%
AACCTGCAGCAGATGAACTA+GGG - chr1_1:28692982-28693001 None:intergenic 45.0%
GTGACCCAAGTATAATCTGG+TGG - chr1_1:28693049-28693068 None:intergenic 45.0%
GCAGTGACCCAAGTATAATC+TGG - chr1_1:28693052-28693071 None:intergenic 45.0%
GTGTTGTGCTGCAGCTTAAA+AGG + chr1_1:28693223-28693242 Msa0017320:three_prime_UTR 45.0%
CTCTCCATGCTTGTCTGATC+TGG + chr1_1:28687885-28687904 Msa0017320:five_prime_UTR 50.0%
CAAGTGGGGTCACAGATCAA+GGG - chr1_1:28688049-28688068 None:intergenic 50.0%
TCAAGTGGGGTCACAGATCA+AGG - chr1_1:28688050-28688069 None:intergenic 50.0%
AGCATTATCAGCCTCTGGCT+TGG + chr1_1:28688716-28688735 Msa0017320:CDS 50.0%
! GCATTATCAGCCTCTGGCTT+GGG + chr1_1:28688717-28688736 Msa0017320:CDS 50.0%
CTTGGGCGAAATGGTGTAGA+AGG + chr1_1:28688734-28688753 Msa0017320:CDS 50.0%
GTGTAGAAGGTTGCCTCGTT+TGG + chr1_1:28688747-28688766 Msa0017320:CDS 50.0%
! GGAAAAGGGGTGCGAATCTA+AGG + chr1_1:28688881-28688900 Msa0017320:CDS 50.0%
!! CTTGGTGATGGTTCAGAGGA+TGG + chr1_1:28688970-28688989 Msa0017320:CDS 50.0%
GAGATCATGCAGAGTGATCC+GGG - chr1_1:28689006-28689025 None:intergenic 50.0%
GCGCCAGGAGAAAACAGAAA+TGG + chr1_1:28689185-28689204 Msa0017320:CDS 50.0%
TCATCGTCTGTCATAGCTCC+AGG - chr1_1:28689279-28689298 None:intergenic 50.0%
ACCAGGGAGACATTCTGTTG+AGG + chr1_1:28689662-28689681 Msa0017320:CDS 50.0%
ACCTCAACAGAATGTCTCCC+TGG - chr1_1:28689666-28689685 None:intergenic 50.0%
!! GAGCAAGCACTGACCTTAAC+AGG - chr1_1:28689951-28689970 None:intergenic 50.0%
CTAAGCAGTCAGCACAAAGG+AGG - chr1_1:28690915-28690934 None:intergenic 50.0%
GAGCTAAGCAGTCAGCACAA+AGG - chr1_1:28690918-28690937 None:intergenic 50.0%
TGCAGGAAGCTACTGAATCC+AGG - chr1_1:28691655-28691674 None:intergenic 50.0%
GGTTCCCACCATCAGAGTAT+TGG + chr1_1:28692811-28692830 Msa0017320:CDS 50.0%
!! GACATGGATGGACTTGTTGG+CGG - chr1_1:28692887-28692906 None:intergenic 50.0%
! CCTGACATGGATGGACTTGT+TGG - chr1_1:28692890-28692909 None:intergenic 50.0%
CCAACAAGTCCATCCATGTC+AGG + chr1_1:28692887-28692906 Msa0017320:CDS 50.0%
GCTGAGAAATTTGTCGCTGC+AGG - chr1_1:28692923-28692942 None:intergenic 50.0%
GAACCTGCAGCAGATGAACT+AGG - chr1_1:28692983-28693002 None:intergenic 50.0%
AAGCTGCAGCACAACACCAT+TGG - chr1_1:28693220-28693239 None:intergenic 50.0%
GGGTGAGATTCGTACGGAAG+CGG + chr1_1:28688462-28688481 Msa0017320:CDS 55.0%
!! CTCGTTTGGTAGCGACGATG+CGG + chr1_1:28688761-28688780 Msa0017320:CDS 55.0%
AGGGCTGACATGACTTTGGC+TGG + chr1_1:28688901-28688920 Msa0017320:CDS 55.0%
TTGTGAGGGGCGATGAGCAA+CGG + chr1_1:28689688-28689707 Msa0017320:CDS 55.0%
! GCATGCCATGTGTTGGCCTA+TGG + chr1_1:28690271-28690290 Msa0017320:intron 55.0%
!! GATGGTGGGAACCACAGGAA+TGG - chr1_1:28692804-28692823 None:intergenic 55.0%
!! ACTCTGATGGTGGGAACCAC+AGG - chr1_1:28692809-28692828 None:intergenic 55.0%
CTCTCTTCGCCTGACATGGA+TGG - chr1_1:28692899-28692918 None:intergenic 55.0%
GCAGATGAACTAGGGCGGTA+TGG - chr1_1:28692974-28692993 None:intergenic 55.0%
CTGCAGCAGATGAACTAGGG+CGG - chr1_1:28692979-28692998 None:intergenic 55.0%
CTGCAGGTTCCAGCAGTAGT+AGG + chr1_1:28692993-28693012 Msa0017320:CDS 55.0%
GGTGGAATTGCAAACGGGTC+TGG - chr1_1:28693031-28693050 None:intergenic 55.0%
!! AGCCTCTGGCTTGGGCGAAA+TGG + chr1_1:28688725-28688744 Msa0017320:CDS 60.0%
CACCATTTCGCCCAAGCCAG+AGG - chr1_1:28688730-28688749 None:intergenic 60.0%
CGCATCGTCGCTACCAAACG+AGG - chr1_1:28688763-28688782 None:intergenic 60.0%
!! GTTTGGTAGCGACGATGCGG+AGG + chr1_1:28688764-28688783 Msa0017320:CDS 60.0%
GAGGATGGGAAAGTCCAGCC+CGG + chr1_1:28688985-28689004 Msa0017320:CDS 60.0%
TCATGCAGAGTGATCCGGGC+TGG - chr1_1:28689002-28689021 None:intergenic 60.0%
TGGCGCCTCCAAGTCAACTG+AGG - chr1_1:28689171-28689190 None:intergenic 60.0%
!! TCAGTTGACTTGGAGGCGCC+AGG + chr1_1:28689170-28689189 Msa0017320:CDS 60.0%
AGGGCTCTCTTCGCCTGACA+TGG - chr1_1:28692903-28692922 None:intergenic 60.0%
CGCCCTAGTTCATCTGCTGC+AGG + chr1_1:28692977-28692996 Msa0017320:CDS 60.0%
TGAGGGGCGATGAGCAACGG+AGG + chr1_1:28689691-28689710 Msa0017320:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 28687730 28693463 28687730 ID=Msa0017320;Name=Msa0017320
chr1_1 mRNA 28687730 28693463 28687730 ID=Msa0017320-mRNA-1;Parent=Msa0017320;Name=Msa0017320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=461|1|1|1|0.5|0.33|3|325|650
chr1_1 exon 28687730 28688010 28687730 ID=Msa0017320-mRNA-1:exon:9583;Parent=Msa0017320-mRNA-1
chr1_1 exon 28688166 28689956 28688166 ID=Msa0017320-mRNA-1:exon:9584;Parent=Msa0017320-mRNA-1
chr1_1 exon 28692797 28693463 28692797 ID=Msa0017320-mRNA-1:exon:9585;Parent=Msa0017320-mRNA-1
chr1_1 five_prime_UTR 28687730 28688010 28687730 ID=Msa0017320-mRNA-1:five_prime_utr;Parent=Msa0017320-mRNA-1
chr1_1 five_prime_UTR 28688166 28688345 28688166 ID=Msa0017320-mRNA-1:five_prime_utr;Parent=Msa0017320-mRNA-1
chr1_1 CDS 28688346 28689956 28688346 ID=Msa0017320-mRNA-1:cds;Parent=Msa0017320-mRNA-1
chr1_1 CDS 28692797 28693138 28692797 ID=Msa0017320-mRNA-1:cds;Parent=Msa0017320-mRNA-1
chr1_1 three_prime_UTR 28693139 28693463 28693139 ID=Msa0017320-mRNA-1:three_prime_utr;Parent=Msa0017320-mRNA-1
Gene Sequence

>Msa0017320

ATGGCAGGGATTGATGTTGCAAAGTTTGGTCATAGTCCTGTTCATAAGGCTGTGATTTTGAAGGATTATGGTGAGCTTAAGAGGATACTTGGGGGTTTACCTAAGCTGTGTAATGTGGGTGAGATTCGTACGGAAGCGGTTTCGATTTTAGAGGAAGAGAAGGCTGATGCAATCTCTGCTGTGATTGATAGGCGTGACGTGCCGAATCGTGATACTCCTCTTCACTTGGCTGTTAAATTAGGGGATGAAGTGGCTGCTGAAATGCTTATGGTTGTTGGTGCTGATTGGAGTTTGCAGAATGAACAAGGGTGGAGTGCTCTTCAAGAAGCTATTTGCAGTCGAGAAGAGCGTATTGCCAAGATCATTATTAAGCATTATCAGCCTCTGGCTTGGGCGAAATGGTGTAGAAGGTTGCCTCGTTTGGTAGCGACGATGCGGAGGATGAGAGACTTTTATATGGAGATTACTTTCAATTTTGAGAGTTCTGTGATACCTTTCATTTCAAGGATTGCACCTTCAGACACTTACAAGATTTGGAAAAGGGGTGCGAATCTAAGGGCTGACATGACTTTGGCTGGTTTCGACGGTTTTAGAATTCAGAGATCAGATCAAAGTGTTCTTTTTCTTGGTGATGGTTCAGAGGATGGGAAAGTCCAGCCCGGATCACTCTGCATGATCTCACACAAGGAAAAGGAGGTACTTAATGCTCTAGATGATGCTGCTTTTGCGGCAAATGATGAAGAAGTTCAGCATGAAGTAGCTGCAATGTCTAAAACAAATATATTTAGGCCTGGTATTGATGTTACTCAGGCAGTTCTTTTGCCTCAGTTGACTTGGAGGCGCCAGGAGAAAACAGAAATGGTAGGATCTTGGAAAGCTAAGGTGTATGATATGCACAATGTTGTTGTAAGTATAAAATCTAGAGGAGTTCCTGGAGCTATGACAGACGATGAGTTATTCTCGTCTTGCAATGAAAATGAAACCGAGAGTGAAGAACTTAACGATATTTTGACCGAAGATGAAAGAAGGCAATTGGAGGATGCACTTAAGCTGGATTCGTCAGAACTGAACAATGATAGTGATGAGGGGATCATTGCGCATCGTCCAAGCTTTAGAGACATTCCTATTGAAGATGGTAACGGTAGCAATAGTGGAGAAAATAAGCAGGAAAAGAAAGGATGGTTTGGTGGATGGAGAAAAAAAGATTATAAACATGAAGCAGCGTCGAAGAAGTTTACACCACCAAGAAGTTCTCTTTGCGTAGATGAAAAGGTGAGCGATTTATTGGGAGATTCTCCTTCAAATAATCAGATTAAACCAGGGAGACATTCTGTTGAGGTTGTTGTGAGGGGCGATGAGCAACGGAGGAAAAAAGATGCCAAAGCTTCTTCTGTAAATTCTGATAGCAGCAGAAGTCGTCATAAAGATGGAAGTCGTGAAAATGAATATAAGAAAGGATTGAGGCCTATTCTTTGGCTTTCGCCAAACTTTCCATTAAAAATTGAAGAACTCTTGCCATTACTTGACATTGTTGCAAACAAAGTTAAAGCAATTCGACGATTAAGAGAATTACTTACAACAAAACTTCCAATGGGAACTTTTCCTGTTAAGGTTGCCATTCCTGTGGTTCCCACCATCAGAGTATTGGTCACTTTTACAAAGTTTGAAGAACTTCAGCCATTAGATGAATTCGCAACACCGCCAACAAGTCCATCCATGTCAGGCGAAGAGAGCCCTGCAGCGACAAATTTCTCAGCTTCATCTTGGTTTCAGTGGATAAAGGCTCCATACCGCCCTAGTTCATCTGCTGCAGGTTCCAGCAGTAGTAGGATAGAAAATATTCCAGACCCGTTTGCAATTCCACCAGATTATACTTGGGTCACTGCTGAAGAAAAGAAGAAAAAGATGCAAGAGAAGAACAAATCAAAGAAAGGGAAAAGTCATAAACAATGA
Protein sequence

>Msa0017320

MAGIDVAKFGHSPVHKAVILKDYGELKRILGGLPKLCNVGEIRTEAVSILEEEKADAISAVIDRRDVPNRDTPLHLAVKLGDEVAAEMLMVVGADWSLQNEQGWSALQEAICSREERIAKIIIKHYQPLAWAKWCRRLPRLVATMRRMRDFYMEITFNFESSVIPFISRIAPSDTYKIWKRGANLRADMTLAGFDGFRIQRSDQSVLFLGDGSEDGKVQPGSLCMISHKEKEVLNALDDAAFAANDEEVQHEVAAMSKTNIFRPGIDVTQAVLLPQLTWRRQEKTEMVGSWKAKVYDMHNVVVSIKSRGVPGAMTDDELFSSCNENETESEELNDILTEDERRQLEDALKLDSSELNNDSDEGIIAHRPSFRDIPIEDGNGSNSGENKQEKKGWFGGWRKKDYKHEAASKKFTPPRSSLCVDEKVSDLLGDSPSNNQIKPGRHSVEVVVRGDEQRRKKDAKASSVNSDSSRSRHKDGSRENEYKKGLRPILWLSPNFPLKIEELLPLLDIVANKVKAIRRLRELLTTKLPMGTFPVKVAIPVVPTIRVLVTFTKFEELQPLDEFATPPTSPSMSGEESPAATNFSASSWFQWIKAPYRPSSSAAGSSSSRIENIPDPFAIPPDYTWVTAEEKKKKMQEKNKSKKGKSHKQ*