AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1449520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1449520 MtrunA17_Chr4g0006741 97.841 1158 24 1 1 1157 1 1158 0.0 2337
Msa1449520 MtrunA17_Chr6g0480511 69.136 81 21 1 1051 1131 1 77 1.17e-29 112
Msa1449520 MtrunA17_Chr6g0480131 80.488 41 8 0 1021 1061 78 118 9.75e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1449520 AT3G17740.1 55.681 1153 469 18 24 1156 18 1148 0.0 1198
Msa1449520 AT3G17712.1 51.733 779 337 16 24 784 18 775 0.0 696
Msa1449520 AT3G17712.2 48.931 842 347 18 24 847 49 825 0.0 688
Msa1449520 AT3G17712.3 49.294 779 331 16 24 784 18 750 0.0 648

Find 267 sgRNAs with CRISPR-Local

Find 634 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCACCTCTTCTATATTTA+TGG 0.091238 tig0032629:+23934 Msa1449520:CDS
GATAGCTCAGATGTGTTAAT+TGG 0.177328 tig0032629:+20200 Msa1449520:CDS
AGTTGCCACTGCTTTATTTC+AGG 0.187243 tig0032629:+20914 Msa1449520:CDS
AAGCTTAATGAGTCATTTAT+TGG 0.188488 tig0032629:+27314 Msa1449520:three_prime_UTR
AATCAAATGTGTATATCTTT+TGG 0.201919 tig0032629:+27287 Msa1449520:three_prime_UTR
AATATATAGAAGTTCATTAA+AGG 0.246122 tig0032629:-27341 None:intergenic
AAAATACTCTTGCAACATTC+TGG 0.251489 tig0032629:+20233 Msa1449520:CDS
CATCATCACTTGAAGAATCT+TGG 0.255261 tig0032629:+19937 Msa1449520:CDS
GGAGAAGTCTTACGCGATTC+TGG 0.260987 tig0032629:+18002 Msa1449520:CDS
TGAAAAGAAAATTAGCATTC+TGG 0.276086 tig0032629:+20106 Msa1449520:CDS
AAAAGAGGCTCGACTATATT+TGG 0.284322 tig0032629:+21685 Msa1449520:CDS
ATGTCTGGGCGACATGTTAA+AGG 0.285959 tig0032629:+19660 Msa1449520:CDS
TTCTAAAGCCATATACTTTC+CGG 0.294879 tig0032629:-19778 None:intergenic
TGATGCGGGCATTGAAGTTT+TGG 0.295063 tig0032629:+24223 Msa1449520:CDS
GACATATTCAAGGGATTATA+CGG 0.303008 tig0032629:-19642 None:intergenic
AATCAGGTCTGATGAAAGTT+TGG 0.310085 tig0032629:+25329 Msa1449520:CDS
TCCCAATTCATTGACTTCTA+TGG 0.311831 tig0032629:+21710 Msa1449520:CDS
TTGTTATTCTATGTCAAAAC+TGG 0.321666 tig0032629:-27458 None:intergenic
ATTGAAGCTTTGTCTGCTTC+AGG 0.321667 tig0032629:+20350 Msa1449520:CDS
TTGTTTGAGGAGCTAACTTC+TGG 0.335825 tig0032629:+24197 Msa1449520:CDS
AAACTGAACTCTGTTCTTAC+TGG 0.335846 tig0032629:+26567 Msa1449520:CDS
TTGCATTTGGCTGTATCTAT+AGG 0.339115 tig0032629:+18214 Msa1449520:CDS
ATTCTGGAAGTTACAAGTTA+TGG 0.348037 tig0032629:+20249 Msa1449520:CDS
AATGATGATAGGGTAAAATA+TGG 0.348416 tig0032629:+27185 Msa1449520:three_prime_UTR
TATAATCCCTTGAATATGTC+TGG 0.349363 tig0032629:+19645 Msa1449520:CDS
GTGTGCTATGAAATGATGAT+AGG 0.352219 tig0032629:+27174 Msa1449520:three_prime_UTR
GATATACACATTTGATTTGT+GGG 0.352839 tig0032629:-27281 None:intergenic
GCATTCCTGCAACCTTATCT+TGG 0.357772 tig0032629:-20052 None:intergenic
TGCAAGAAAGGTGTTTGATA+TGG 0.360767 tig0032629:+23674 Msa1449520:CDS
ACATCAGTTCGCATCATATC+AGG 0.363869 tig0032629:-26721 None:intergenic
AGTTCTTGCTGAACAATTGC+AGG 0.366857 tig0032629:-20831 None:intergenic
ATACTGGTCCGGAAAGTATA+TGG 0.373451 tig0032629:+19770 Msa1449520:CDS
AACTGACATTGATTTGGTTA+TGG 0.374531 tig0032629:+21205 Msa1449520:CDS
CACCATAGAAGTCAATGAAT+TGG 0.376393 tig0032629:-21712 None:intergenic
TGTTCAAGCTTGGGCTGATT+CGG 0.379325 tig0032629:+18137 Msa1449520:CDS
GCACGAAGAGAGGCTGATTA+TGG 0.379965 tig0032629:+23639 Msa1449520:CDS
TGTGTCGCCCATCCGGAAGC+TGG 0.380256 tig0032629:+27226 Msa1449520:three_prime_UTR
TGAGAACAGTATTATCATCT+TGG 0.381863 tig0032629:+24123 Msa1449520:CDS
AAATGAAACTGACATTGATT+TGG 0.382298 tig0032629:+21199 Msa1449520:CDS
ACATTTGATTTGTGGGGTCT+AGG 0.397563 tig0032629:-27274 None:intergenic
AGAACCTTTGTCTAAAGATA+TGG 0.398050 tig0032629:+21157 Msa1449520:CDS
TGATATTAATGCTGGGGATG+GGG 0.400245 tig0032629:+21307 Msa1449520:CDS
TGAAGTCTGCTGGGCGATAC+TGG 0.400470 tig0032629:+19754 Msa1449520:CDS
AGTTTGGGAATCCGTTTCTC+AGG 0.400962 tig0032629:+25345 Msa1449520:CDS
ACCCGCATGATGAAATAGTT+TGG 0.410461 tig0032629:+20012 Msa1449520:CDS
TCTGATGAGAGAAGTGGATT+TGG 0.413272 tig0032629:+18099 Msa1449520:CDS
AGATGTCGATATTGATGCTT+TGG 0.415396 tig0032629:+19722 Msa1449520:CDS
TGTCAGTTTGTTGAACTCCC+TGG 0.415865 tig0032629:-19982 None:intergenic
AACTTCTCTAACATAGAATC+TGG 0.417243 tig0032629:-22492 None:intergenic
GTTGTATGAGGAGACGATTT+TGG 0.421246 tig0032629:-19837 None:intergenic
ATGTTCTGCTTCATTGTTTG+AGG 0.421531 tig0032629:+24184 Msa1449520:CDS
GATATTAATGCTGGGGATGG+GGG 0.421772 tig0032629:+21308 Msa1449520:CDS
ATCATCACTTGAAGAATCTT+GGG 0.421872 tig0032629:+19938 Msa1449520:CDS
ATATTGTCTTGCTTAGGAAA+TGG 0.422114 tig0032629:+24023 Msa1449520:CDS
AGAGAAGTGGATTTGGTTCG+AGG 0.423815 tig0032629:+18106 Msa1449520:CDS
TACTGTGGCGTTGCTACATT+GGG 0.427366 tig0032629:+26286 Msa1449520:CDS
ATGTTAAAGGTTTGTATTGG+TGG 0.430835 tig0032629:+19673 Msa1449520:CDS
GATCGTGATAATCTTGCATT+TGG 0.431143 tig0032629:+18201 Msa1449520:CDS
TTTCAACAAACAGTCCTACT+TGG 0.431735 tig0032629:+22439 Msa1449520:CDS
CCGACTTATTGATCTGCTCT+TGG 0.433348 tig0032629:+26698 Msa1449520:three_prime_UTR
TGCTGAACAATTGCAGGATC+CGG 0.434392 tig0032629:-20825 None:intergenic
ATGCCTATTCGAAGGAAGTT+AGG 0.435294 tig0032629:+21401 Msa1449520:CDS
TTGATATTAATGCTGGGGAT+GGG 0.436562 tig0032629:+21306 Msa1449520:CDS
GAGGAATTTCTCCAAGTTCA+AGG 0.436742 tig0032629:+20295 Msa1449520:CDS
AACATATTGTGTCGCCCATC+CGG 0.441908 tig0032629:+27219 Msa1449520:three_prime_UTR
GAGTTCCAAGATAAGGTTGC+AGG 0.444561 tig0032629:+20047 Msa1449520:CDS
TGGCACCGTAACCCAGCTTC+CGG 0.445102 tig0032629:-27238 None:intergenic
AGATATACACATTTGATTTG+TGG 0.445128 tig0032629:-27282 None:intergenic
TTCTTCTGACCATTTGATCC+AGG 0.447092 tig0032629:-21351 None:intergenic
TGAGAATTTGCTAAAGCTGC+TGG 0.447644 tig0032629:+21280 Msa1449520:CDS
ATCAGGTCTGATGAAAGTTT+GGG 0.449772 tig0032629:+25330 Msa1449520:CDS
GATTATTACTTTGATTCTCA+TGG 0.450097 tig0032629:+18177 Msa1449520:CDS
GACATGTTAAAGGTTTGTAT+TGG 0.456197 tig0032629:+19670 Msa1449520:CDS
CCCATCCGGAAGCTGGGTTA+CGG 0.457862 tig0032629:+27233 Msa1449520:three_prime_UTR
CAATATTGATCTTGCAAGAA+AGG 0.458569 tig0032629:+23662 Msa1449520:CDS
CAGAGGCATCAGAAGCAATC+AGG 0.458800 tig0032629:+25313 Msa1449520:CDS
AGAAGAAGCGGAAGCGTGAT+AGG 0.459511 tig0032629:+18076 Msa1449520:CDS
GTCGTTTCTTCCGCCGGATG+AGG 0.461191 tig0032629:-17754 None:intergenic
CAACTTCTCCGCTTCCTCAA+TGG 0.462573 tig0032629:+17851 Msa1449520:CDS
GGCGCCGTCGTTTCTTCCGC+CGG 0.463420 tig0032629:-17760 None:intergenic
CTACCTAACTTCCTTCGAAT+AGG 0.464372 tig0032629:-21404 None:intergenic
GGAAATCGCGTGTTCAAGCT+TGG 0.464439 tig0032629:+18127 Msa1449520:CDS
TGCAGATTTGAGTGGCAGGC+TGG 0.464824 tig0032629:+20882 Msa1449520:CDS
CTGGGAATTGATATTAATGC+TGG 0.465869 tig0032629:+21299 Msa1449520:CDS
TTAAAAGGTGTAGTGGAAGT+TGG 0.465903 tig0032629:+25400 Msa1449520:CDS
GACAGAGAACACACTTAGCT+TGG 0.468388 tig0032629:+22461 Msa1449520:CDS
ACACTTTGACCTGGATCAAA+TGG 0.468618 tig0032629:+21342 Msa1449520:CDS
CTTCAGGCAGCAAGCACTCT+AGG 0.468679 tig0032629:+20366 Msa1449520:CDS
GGTGCTAGAGTCGGAGAAGA+AGG 0.469058 tig0032629:+21026 Msa1449520:CDS
GTCTGGTGGCGGCGATTGCA+CGG 0.470391 tig0032629:-17947 None:intergenic
GTCATTGATGACGGCGATGT+CGG 0.472535 tig0032629:-17896 None:intergenic
ACCATAGAAGTCAATGAATT+GGG 0.472745 tig0032629:-21711 None:intergenic
AAATCTAAAGTGAAACTAGT+AGG 0.473342 tig0032629:-22555 None:intergenic
TTTATACCTTTATCAGATGT+TGG 0.475182 tig0032629:+19870 Msa1449520:CDS
TCTTTGCAGATTTGAGTGGC+AGG 0.476187 tig0032629:+20878 Msa1449520:CDS
GAAAATTAGCATTCTGGAGA+AGG 0.477612 tig0032629:+20112 Msa1449520:CDS
AGTTCAAGGTTTCCATGGTT+AGG 0.478362 tig0032629:+20309 Msa1449520:CDS
GTCCACATGGTTGGAGAAAG+AGG 0.479968 tig0032629:+21061 Msa1449520:CDS
TATTAGACGTTGTGTGGAAG+TGG 0.480847 tig0032629:-25423 None:intergenic
AGAAGAGGAAGAAGAAGAAG+CGG 0.480918 tig0032629:+18064 Msa1449520:CDS
ATAGCTCAGATGTGTTAATT+GGG 0.481935 tig0032629:+20201 Msa1449520:CDS
AACTCATCTTGTGTTGTATG+AGG 0.482210 tig0032629:-19849 None:intergenic
CTCCAAGTTCAAGGTTTCCA+TGG 0.483168 tig0032629:+20304 Msa1449520:CDS
AAATTCTCAGTATCATCTTC+AGG 0.485844 tig0032629:-21266 None:intergenic
TTTCACCCTGAACACAAAAG+AGG 0.486554 tig0032629:+21670 Msa1449520:CDS
AAAATTCAAGTTGATAGCTA+TGG 0.486757 tig0032629:-25264 None:intergenic
ATACATATATTGTCTTGCTT+AGG 0.487166 tig0032629:+24017 Msa1449520:CDS
TCCTCGGAATCGGATGGTAA+TGG 0.487628 tig0032629:+18027 Msa1449520:CDS
TAGCTGGAGGCCCTGAGAAA+CGG 0.488750 tig0032629:-25356 None:intergenic
GAAAACCATCTGTAGTTGTC+TGG 0.489074 tig0032629:+26160 Msa1449520:intron
ACTTGTAACAGCGTTCATCT+AGG 0.489334 tig0032629:-25459 None:intergenic
GTGCTATCCATGCTTGCCCC+TGG 0.490132 tig0032629:+26361 Msa1449520:CDS
TCTGCTGGGCGATACTGGTC+CGG 0.492360 tig0032629:+19759 Msa1449520:CDS
GTCTAAAGATATGGAGGGTA+CGG 0.494692 tig0032629:+21166 Msa1449520:CDS
CAGCCATGTGAATATCTGAT+AGG 0.495331 tig0032629:+27136 Msa1449520:three_prime_UTR
CTAACTTCTGGATGTGATGC+GGG 0.496122 tig0032629:+24209 Msa1449520:CDS
ATGAAAATGAAGGCGGAGGT+TGG 0.497135 tig0032629:+21123 Msa1449520:CDS
CATGCAGAATGGATATTGCC+CGG 0.498884 tig0032629:+19613 Msa1449520:intron
AAATGACCAATCTGTCGCTC+TGG 0.499183 tig0032629:+24160 Msa1449520:CDS
GGGATTATACGGTTTGTGCC+GGG 0.499324 tig0032629:-19631 None:intergenic
GGTTACGCCTAGTCGAGCTT+TGG 0.499801 tig0032629:+22737 Msa1449520:CDS
ACCGTAACCCAGCTTCCGGA+TGG 0.501985 tig0032629:-27234 None:intergenic
CTCTGCTCTGTGAGTAGCAA+AGG 0.502309 tig0032629:-20966 None:intergenic
TTACTGAGCCATTGAGGAAG+CGG 0.502373 tig0032629:-17859 None:intergenic
AACCATGGAAACCTTGAACT+TGG 0.502602 tig0032629:-20306 None:intergenic
GATTCTGGAATCCTCGGAAT+CGG 0.503974 tig0032629:+18017 Msa1449520:CDS
GATGATAAAATGAAGTCTGC+TGG 0.504271 tig0032629:+19744 Msa1449520:CDS
AATGAAGGCGGAGGTTGGTC+TGG 0.504419 tig0032629:+21128 Msa1449520:CDS
AACATACCAGAGCGACAGAT+TGG 0.504775 tig0032629:-24166 None:intergenic
GTATTATCATCTTGGTTTCG+TGG 0.505889 tig0032629:+24131 Msa1449520:CDS
GCGGCGATTGCACGGTTTCG+CGG 0.507407 tig0032629:-17939 None:intergenic
AGGGATTATACGGTTTGTGC+CGG 0.507851 tig0032629:-19632 None:intergenic
AAGGTCATGACTCTTGCAAA+AGG 0.510428 tig0032629:-26662 None:intergenic
GAAATCGCGTGTTCAAGCTT+GGG 0.510544 tig0032629:+18128 Msa1449520:CDS
GATGTACCAACATCTGATAA+AGG 0.510740 tig0032629:-19876 None:intergenic
AAATGAATTCTTCTAACCGT+GGG 0.512118 tig0032629:+22715 Msa1449520:CDS
GGGCTCTCGGTTGGTCCACA+TGG 0.512719 tig0032629:+21048 Msa1449520:CDS
TAAATATAGAAGAGGTGCAT+TGG 0.516208 tig0032629:-23931 None:intergenic
CAGATGTGTTAATTGGGAGA+TGG 0.517234 tig0032629:+20207 Msa1449520:CDS
TCAGATGTTGGTACATCTCA+AGG 0.520098 tig0032629:+19882 Msa1449520:CDS
GTCCTCACCAGGGGCAAGCA+TGG 0.521108 tig0032629:-26368 None:intergenic
AGGCAGCAAGCACTCTAGGC+AGG 0.522323 tig0032629:+20370 Msa1449520:CDS
CAATTCATTGACTTCTATGG+TGG 0.522961 tig0032629:+21713 Msa1449520:CDS
CTCCTCTTTCTCCAACCATG+TGG 0.525797 tig0032629:-21063 None:intergenic
GAATCCGTGGATTATTTGAA+AGG 0.525915 tig0032629:+26229 Msa1449520:CDS
TGGAGAAAGAGGAGGAAACT+AGG 0.527396 tig0032629:+21072 Msa1449520:CDS
ATATTTATGGTATGCTGAAG+TGG 0.527552 tig0032629:+23947 Msa1449520:CDS
AGATGTGTTAATTGGGAGAT+GGG 0.527919 tig0032629:+20208 Msa1449520:CDS
TCAAGCTGATGATTCTTCAC+CGG 0.528047 tig0032629:+20806 Msa1449520:CDS
CATCATATCAGCATTCCTCA+TGG 0.528935 tig0032629:-22592 None:intergenic
TGGAATCAAAGTGGTTCACT+TGG 0.529079 tig0032629:+19693 Msa1449520:CDS
GAATGGAGAGAGAGAAGAAG+AGG 0.534659 tig0032629:+18049 Msa1449520:CDS
ACCAAACTATTTCATCATGC+GGG 0.535900 tig0032629:-20013 None:intergenic
GAGAATTTGCTAAAGCTGCT+GGG 0.536239 tig0032629:+21281 Msa1449520:CDS
TTTAAAAGTTCTGGACTGAA+GGG 0.539764 tig0032629:-25382 None:intergenic
GTACTGTGGCGTTGCTACAT+TGG 0.539841 tig0032629:+26285 Msa1449520:CDS
ATCGCGTAAGACTTCTCCTT+AGG 0.541047 tig0032629:-17997 None:intergenic
GGAATCAAAGTGGTTCACTT+GGG 0.541162 tig0032629:+19694 Msa1449520:CDS
GAGTGCTTCACTAGTAGAAG+AGG 0.542272 tig0032629:-21585 None:intergenic
GTGTCGCCCATCCGGAAGCT+GGG 0.542652 tig0032629:+27227 Msa1449520:three_prime_UTR
GTCGGAGAAGAAGGGGCTCT+CGG 0.543567 tig0032629:+21035 Msa1449520:CDS
ATGTGTGTACCAGGTCAAAA+CGG 0.545599 tig0032629:+26523 Msa1449520:intron
GTCTAGGTTAGCGCACAGAT+TGG 0.545761 tig0032629:-27258 None:intergenic
GAGAAGAAGGGGCTCTCGGT+TGG 0.545878 tig0032629:+21039 Msa1449520:CDS
CTGGACTGAAGGGATATAGC+TGG 0.546217 tig0032629:-25372 None:intergenic
CTAGAGTTACTGAGCCATTG+AGG 0.547683 tig0032629:-17865 None:intergenic
AATTCTTGCATGTTGTTCAG+AGG 0.548394 tig0032629:+20276 Msa1449520:CDS
AAGGCGGAGGTTGGTCTGGT+TGG 0.548589 tig0032629:+21132 Msa1449520:CDS
GCAATTTATTAGACGTTGTG+TGG 0.551393 tig0032629:-25429 None:intergenic
TGACATTGATTTGGTTATGG+AGG 0.551910 tig0032629:+21208 Msa1449520:CDS
CAAATAATCCACGGATTCTG+TGG 0.552387 tig0032629:-26224 None:intergenic
TGCAACCTTATCTTGGAACT+CGG 0.552722 tig0032629:-20045 None:intergenic
AATCCGTGGATTATTTGAAA+GGG 0.552807 tig0032629:+26230 Msa1449520:CDS
ATGTCGCCCAGACATATTCA+AGG 0.553525 tig0032629:-19652 None:intergenic
TCTCGGTTGGTCCACATGGT+TGG 0.553706 tig0032629:+21052 Msa1449520:CDS
ATCTGATAGGAGCAGAGTGG+TGG 0.558214 tig0032629:+27149 Msa1449520:three_prime_UTR
AGCGACATCGTCATTGATGA+CGG 0.558684 tig0032629:-17905 None:intergenic
AACCAAACTATTTCATCATG+CGG 0.561510 tig0032629:-20014 None:intergenic
TCCATTACCATCCGATTCCG+AGG 0.562094 tig0032629:-18028 None:intergenic
ACCTTTGTCTAAAGATATGG+AGG 0.563862 tig0032629:+21160 Msa1449520:CDS
TCAGTCTTTGCAGATTTGAG+TGG 0.565941 tig0032629:+20874 Msa1449520:CDS
CTGATATGATGAAATTCGTA+CGG 0.566214 tig0032629:+22604 Msa1449520:CDS
GCAGGAATGCAACGGCAGAA+AGG 0.566264 tig0032629:+20065 Msa1449520:CDS
GTGCTAGAGTCGGAGAAGAA+GGG 0.568609 tig0032629:+21027 Msa1449520:CDS
ATTGATATTAATGCTGGGGA+TGG 0.569601 tig0032629:+21305 Msa1449520:CDS
CAGGTCAAAACGGCTATGGT+TGG 0.571924 tig0032629:+26533 Msa1449520:intron
GGCTCAATCCACAGAATCCG+TGG 0.572080 tig0032629:+26216 Msa1449520:CDS
TGTGGAAGGGCTTCCTCCCG+AGG 0.576194 tig0032629:+23707 Msa1449520:CDS
GAGCTCTCACATGAAAATGA+AGG 0.577121 tig0032629:+21113 Msa1449520:CDS
GTTTGGGAATCCGTTTCTCA+GGG 0.578296 tig0032629:+25346 Msa1449520:CDS
AAAATGAATTCTTCTAACCG+TGG 0.580478 tig0032629:+22714 Msa1449520:CDS
AGAGAACACACTTAGCTTGG+AGG 0.581855 tig0032629:+22464 Msa1449520:CDS
AGCATACATCTTCCTAACCA+TGG 0.583395 tig0032629:-20321 None:intergenic
CTGCCCTTTCAAATAATCCA+CGG 0.586163 tig0032629:-26233 None:intergenic
ATGGCATTGTTATCTGTGGA+AGG 0.586327 tig0032629:+23693 Msa1449520:CDS
TCAAAACGGCTATGGTTGGA+TGG 0.586926 tig0032629:+26537 Msa1449520:CDS
CCCTCCATATCTTTAGACAA+AGG 0.588936 tig0032629:-21161 None:intergenic
TTACGCGATTCTGGAATCCT+CGG 0.592624 tig0032629:+18011 Msa1449520:CDS
GTACCAGGTCAAAACGGCTA+TGG 0.592964 tig0032629:+26529 Msa1449520:intron
TGGGAATTGATATTAATGCT+GGG 0.592965 tig0032629:+21300 Msa1449520:CDS
ATAATCCCTTGAATATGTCT+GGG 0.593366 tig0032629:+19646 Msa1449520:CDS
CCGTAACCCAGCTTCCGGAT+GGG 0.594994 tig0032629:-27233 None:intergenic
GACTTTGCCAAAGCTCGACT+AGG 0.595236 tig0032629:-22744 None:intergenic
TGTGCTATGAAATGATGATA+GGG 0.595243 tig0032629:+27175 Msa1449520:three_prime_UTR
AAAATACGTCGAGCTGCAGA+AGG 0.595640 tig0032629:-26333 None:intergenic
CAGCGATGAAAATCGACCTA+AGG 0.596898 tig0032629:+17981 Msa1449520:CDS
ATCAGTGGATGCCTATTCGA+AGG 0.597051 tig0032629:+21393 Msa1449520:CDS
TGGCATTGTTATCTGTGGAA+GGG 0.597415 tig0032629:+23694 Msa1449520:CDS
ATTACATAAGGATGCTTCAG+AGG 0.597554 tig0032629:+25296 Msa1449520:CDS
CAACTGCTTAGAGCACGTCA+AGG 0.599219 tig0032629:+24086 Msa1449520:CDS
TCAAGCTTGGGCTGATTCGG+AGG 0.600114 tig0032629:+18140 Msa1449520:CDS
GTTTCTTCCGCCGGATGAGG+TGG 0.601810 tig0032629:-17751 None:intergenic
AACTGCTTAGAGCACGTCAA+GGG 0.603024 tig0032629:+24087 Msa1449520:CDS
TCACATGAAAATGAAGGCGG+AGG 0.604343 tig0032629:+21119 Msa1449520:CDS
TGCTAGAGTCGGAGAAGAAG+GGG 0.604644 tig0032629:+21028 Msa1449520:CDS
GGAATCGGATGGTAATGGAA+TGG 0.605026 tig0032629:+18032 Msa1449520:CDS
CTGGAATCCTCGGAATCGGA+TGG 0.605711 tig0032629:+18021 Msa1449520:CDS
ATATACACATTTGATTTGTG+GGG 0.606321 tig0032629:-27280 None:intergenic
AGTGTGTTCTCTGTCCAAGT+AGG 0.607389 tig0032629:-22453 None:intergenic
TGAAGCACTCGAAACAGAAG+AGG 0.607630 tig0032629:+21598 Msa1449520:CDS
CTTCTAGAGATTGTGATCAG+TGG 0.608924 tig0032629:+21378 Msa1449520:CDS
ATGAAATGTTAAATAAAACC+AGG 0.609052 tig0032629:+19964 Msa1449520:CDS
GATAGGTCTGATGAGAGAAG+TGG 0.611307 tig0032629:+18093 Msa1449520:CDS
AATTCATTGACTTCTATGGT+GGG 0.613871 tig0032629:+21714 Msa1449520:CDS
AATAGTCATGGTGCTAGAGT+CGG 0.614865 tig0032629:+21017 Msa1449520:CDS
GCATACCATAAATATAGAAG+AGG 0.615993 tig0032629:-23939 None:intergenic
GCTAACTTCTGGATGTGATG+CGG 0.619258 tig0032629:+24208 Msa1449520:CDS
GAATCAAAGTGGTTCACTTG+GGG 0.619557 tig0032629:+19695 Msa1449520:CDS
TCTGATAGGAGCAGAGTGGT+GGG 0.619562 tig0032629:+27150 Msa1449520:three_prime_UTR
TGATATGGCATTGTTATCTG+TGG 0.623363 tig0032629:+23689 Msa1449520:CDS
TCTTCCAAAACGTGATTACG+TGG 0.625230 tig0032629:-22657 None:intergenic
GGGAGTTCAACAAACTGACA+AGG 0.625965 tig0032629:+19985 Msa1449520:CDS
CCAAGAGCAGATCAATAAGT+CGG 0.629491 tig0032629:-26698 None:intergenic
AAAAGCCAGACAACTACAGA+TGG 0.630771 tig0032629:-26165 None:intergenic
TGCTCTGTGAGTAGCAAAGG+AGG 0.632640 tig0032629:-20963 None:intergenic
TTGTATTGGTGGAATCAAAG+TGG 0.634447 tig0032629:+19684 Msa1449520:CDS
ATAAGGTTGCAGGAATGCAA+CGG 0.637235 tig0032629:+20057 Msa1449520:CDS
ATGATAAAATGAAGTCTGCT+GGG 0.641434 tig0032629:+19745 Msa1449520:CDS
TATGGAGGATAATCAAGATG+AGG 0.643787 tig0032629:+21223 Msa1449520:CDS
GGGAAGACAGGGAAGAGTGA+AGG 0.644577 tig0032629:-17802 None:intergenic
AAGTTAATGACACTTTGACC+TGG 0.647706 tig0032629:+21333 Msa1449520:CDS
TTGTCATACGAGATGTCTAG+AGG 0.649299 tig0032629:+26192 Msa1449520:CDS
GACTGAAGGGATATAGCTGG+AGG 0.651632 tig0032629:-25369 None:intergenic
AGTCGGATTCTCGACAACAA+AGG 0.653317 tig0032629:-26681 None:intergenic
CTCTCACATGAAAATGAAGG+CGG 0.657419 tig0032629:+21116 Msa1449520:CDS
GAGCTTGCAAATAACACTAA+CGG 0.658106 tig0032629:+23969 Msa1449520:CDS
CTCGACTAGGCGTAACCCCA+CGG 0.658761 tig0032629:-22731 None:intergenic
TGAAATGTTAAATAAAACCA+GGG 0.660472 tig0032629:+19965 Msa1449520:CDS
AATGAATTCTTCTAACCGTG+GGG 0.661218 tig0032629:+22716 Msa1449520:CDS
TGTCGCCCAGACATATTCAA+GGG 0.662414 tig0032629:-19651 None:intergenic
TTCTATTAGGAAGTTCCATG+AGG 0.662474 tig0032629:+22577 Msa1449520:CDS
TTCAGCCTGAAATAAAGCAG+TGG 0.668193 tig0032629:-20919 None:intergenic
TAGGCAACGAGTCGTCAAAG+AGG 0.669463 tig0032629:+21091 Msa1449520:CDS
AATACAGTACATACCTCGGG+AGG 0.671521 tig0032629:-23720 None:intergenic
TCATCCGGCGGAAGAAACGA+CGG 0.675988 tig0032629:+17756 Msa1449520:CDS
ACACAACGTCTAATAAATTG+CGG 0.684041 tig0032629:+25431 Msa1449520:CDS
GGAGTTCAACAAACTGACAA+GGG 0.685275 tig0032629:+19986 Msa1449520:CDS
TCATACGAGATGTCTAGAGG+TGG 0.692905 tig0032629:+26195 Msa1449520:CDS
GGGAATTGATATTAATGCTG+GGG 0.694418 tig0032629:+21301 Msa1449520:CDS
GCTCCTATCAGATATTCACA+TGG 0.694687 tig0032629:-27139 None:intergenic
TGGTGTATATGCACGAAGAG+AGG 0.702422 tig0032629:+23629 Msa1449520:CDS
TTTGCAGCTCAGTTGTACTG+TGG 0.704524 tig0032629:+26271 Msa1449520:CDS
CCTTTGTCTAAAGATATGGA+GGG 0.715925 tig0032629:+21161 Msa1449520:CDS
CACATGGTTGGAGAAAGAGG+AGG 0.728895 tig0032629:+21064 Msa1449520:CDS
CAACGTCTAATAAATTGCGG+CGG 0.732271 tig0032629:+25434 Msa1449520:CDS
CTTGCAAATAACACTAACGG+TGG 0.740720 tig0032629:+23972 Msa1449520:CDS
AATATCTGATAGGAGCAGAG+TGG 0.802595 tig0032629:+27146 Msa1449520:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGCAAAAAAATAAATAAA+AGG - tig0032629:23874-23893 None:intergenic 10.0%
!!! TATTATTTATTTTTTTTGGT+AGG + tig0032629:24423-24442 Msa1449520:intron 10.0%
!!! ATTATTTATTTTTTTTGGTA+GGG + tig0032629:24424-24443 Msa1449520:intron 10.0%
!!! ATTTGGAAATATATTATTTT+AGG - tig0032629:25567-25586 None:intergenic 10.0%
!!! TATATTAATTTTTCAGAAAA+AGG - tig0032629:25808-25827 None:intergenic 10.0%
!! TGAATCAAAATTTAGTATTT+AGG + tig0032629:18545-18564 Msa1449520:intron 15.0%
!! GAATCAAAATTTAGTATTTA+GGG + tig0032629:18546-18565 Msa1449520:intron 15.0%
!!! TAATAAGTATTTGACTTTAT+TGG + tig0032629:19068-19087 Msa1449520:intron 15.0%
!! ACTAAATACTCATTATTATA+TGG - tig0032629:19159-19178 None:intergenic 15.0%
!! GATAATAAATTGAAAAAAGA+TGG - tig0032629:20452-20471 None:intergenic 15.0%
!! GATCAAAAATAAAATTTCAT+TGG + tig0032629:23484-23503 Msa1449520:intron 15.0%
!!! AAACTTTGAAAAAGTATAAA+GGG - tig0032629:23771-23790 None:intergenic 15.0%
!!! AAAACTTTGAAAAAGTATAA+AGG - tig0032629:23772-23791 None:intergenic 15.0%
!! CATTAGTTATTGTAAAATTT+AGG + tig0032629:24385-24404 Msa1449520:intron 15.0%
!!! TTTTGTTTAACTATTACATA+AGG + tig0032629:25284-25303 Msa1449520:CDS 15.0%
!!! AATTCTTTAACTTAATAGAT+TGG + tig0032629:25778-25797 Msa1449520:intron 15.0%
!! AATATATAGAAGTTCATTAA+AGG - tig0032629:27344-27363 None:intergenic 15.0%
!!! TGTTTTATCCATTTTTAAAT+TGG + tig0032629:27375-27394 Msa1449520:three_prime_UTR 15.0%
!!! GTTTTATCCATTTTTAAATT+GGG + tig0032629:27376-27395 Msa1449520:three_prime_UTR 15.0%
!!! AAGTTTTAACGATAAATAAT+TGG - tig0032629:27410-27429 None:intergenic 15.0%
!! ATTCAAAATCTAAACAAAAC+CGG - tig0032629:18300-18319 None:intergenic 20.0%
!!! AAACCCTGAATAATTTTTTT+GGG - tig0032629:18741-18760 None:intergenic 20.0%
!! AATGAGTATTTAGTATTGTT+AGG + tig0032629:19165-19184 Msa1449520:intron 20.0%
!!! TAACTTTGTTTCAATTTTCT+GGG - tig0032629:19332-19351 None:intergenic 20.0%
!! ATTAAAGTGATAAAGTGATA+TGG + tig0032629:19423-19442 Msa1449520:intron 20.0%
!! AAACATAAATAAGAACTCAA+AGG - tig0032629:19534-19553 None:intergenic 20.0%
!! TTTATAAATTTCATGCAGAA+TGG + tig0032629:19602-19621 Msa1449520:intron 20.0%
!! ATGAAATGTTAAATAAAACC+AGG + tig0032629:19964-19983 Msa1449520:CDS 20.0%
!! TGAAATGTTAAATAAAACCA+GGG + tig0032629:19965-19984 Msa1449520:CDS 20.0%
!!! TTGTTTGATAAGCTTTTAAA+AGG - tig0032629:20178-20197 None:intergenic 20.0%
!! TGGATGAATGATAATATTAT+AGG + tig0032629:20508-20527 Msa1449520:intron 20.0%
!! GGATGAATGATAATATTATA+GGG + tig0032629:20509-20528 Msa1449520:intron 20.0%
!!! TTTTTTTTTTCCCTTAAAAG+TGG + tig0032629:20549-20568 Msa1449520:intron 20.0%
!!! GTATTATTTTGACAACAATT+TGG + tig0032629:21955-21974 Msa1449520:intron 20.0%
!!! CTTGTATTTTCAACATAATT+TGG + tig0032629:22149-22168 Msa1449520:intron 20.0%
!! CATAATTTGGATAGTTATAA+TGG + tig0032629:22162-22181 Msa1449520:intron 20.0%
!!! CATAATTATCCATAATTTTC+AGG - tig0032629:22216-22235 None:intergenic 20.0%
!! GATGGTTAATAAATATAACA+AGG - tig0032629:22267-22286 None:intergenic 20.0%
!!! TTCACTTTAGATTTTCTATT+AGG + tig0032629:22564-22583 Msa1449520:CDS 20.0%
!! AATTTATTTATGCTACAGAA+AGG - tig0032629:22823-22842 None:intergenic 20.0%
!! TAAAGTTCAAATATCAGTTT+AGG - tig0032629:22904-22923 None:intergenic 20.0%
!! ATCATGTTAAAATTACAGTT+AGG + tig0032629:22945-22964 Msa1449520:intron 20.0%
!! TCATGTTAAAATTACAGTTA+GGG + tig0032629:22946-22965 Msa1449520:intron 20.0%
!!! AACTTTGAAAAAGTATAAAG+GGG - tig0032629:23770-23789 None:intergenic 20.0%
!! GCAAAAAAATAAATAAAAGG+AGG - tig0032629:23871-23890 None:intergenic 20.0%
!! TGTAATGACAGAATTATTAT+AGG - tig0032629:24672-24691 None:intergenic 20.0%
!! TTGATCTATTATGATTCAAT+TGG + tig0032629:24923-24942 Msa1449520:intron 20.0%
!! ATTTATACTTTCAAAGCATA+AGG - tig0032629:25490-25509 None:intergenic 20.0%
!! AATGACAAGTTATTCATATT+TGG - tig0032629:25584-25603 None:intergenic 20.0%
!! TTCTTAGGTATTATGAAAAT+AGG + tig0032629:25603-25622 Msa1449520:intron 20.0%
!!! AATCAAATGTGTATATCTTT+TGG + tig0032629:27287-27306 Msa1449520:three_prime_UTR 20.0%
!!! ATCAAATGTGTATATCTTTT+GGG + tig0032629:27288-27307 Msa1449520:three_prime_UTR 20.0%
!! TTGAAGAGAAGATTTTGTTA+CGG - tig0032629:17827-17846 None:intergenic 25.0%
! GATTATTACTTTGATTCTCA+TGG + tig0032629:18177-18196 Msa1449520:CDS 25.0%
! ATCTATAGGTATATTGGAAT+TGG + tig0032629:18228-18247 Msa1449520:intron 25.0%
! TTGGAATTGGATGAAAAAAT+TGG + tig0032629:18241-18260 Msa1449520:intron 25.0%
! TGGAATTGGATGAAAAAATT+GGG + tig0032629:18242-18261 Msa1449520:intron 25.0%
!! TGTTCATTTTAAATTGCTAC+CGG + tig0032629:18278-18297 Msa1449520:intron 25.0%
! CAAATAATCCTTTGAATGAA+TGG - tig0032629:18403-18422 None:intergenic 25.0%
! AGTTCCCAAAAAAATTATTC+AGG + tig0032629:18734-18753 Msa1449520:intron 25.0%
! GTTCCCAAAAAAATTATTCA+GGG + tig0032629:18735-18754 Msa1449520:intron 25.0%
!!! CAAACCCTGAATAATTTTTT+TGG - tig0032629:18742-18761 None:intergenic 25.0%
!! AAAATTATTCAGGGTTTGTT+TGG + tig0032629:18744-18763 Msa1449520:intron 25.0%
! CACAAAAATGCACATTAATA+AGG - tig0032629:19017-19036 None:intergenic 25.0%
! GTCAAATACTTATTAGATCA+TGG - tig0032629:19063-19082 None:intergenic 25.0%
!!! TTGTTAGGCTTGTTTTATAA+TGG + tig0032629:19180-19199 Msa1449520:intron 25.0%
!!! GTAACTTTGTTTCAATTTTC+TGG - tig0032629:19333-19352 None:intergenic 25.0%
!! TGAAACAAAGTTACTTGTTT+TGG + tig0032629:19339-19358 Msa1449520:intron 25.0%
!!! GAAACAAAGTTACTTGTTTT+GGG + tig0032629:19340-19359 Msa1449520:intron 25.0%
! TTTATACCTTTATCAGATGT+TGG + tig0032629:19870-19889 Msa1449520:CDS 25.0%
!!! TGATGATGAAATTTTAGAGT+CGG - tig0032629:19925-19944 None:intergenic 25.0%
! TGAAAAGAAAATTAGCATTC+TGG + tig0032629:20106-20125 Msa1449520:CDS 25.0%
!! GTAATAGATTTTCATTCTCT+GGG - tig0032629:20151-20170 None:intergenic 25.0%
!! AGTAATAGATTTTCATTCTC+TGG - tig0032629:20152-20171 None:intergenic 25.0%
!!! TGTCATTTTTATCCATTGAT+GGG + tig0032629:20618-20637 Msa1449520:intron 25.0%
!!! ACCTATTTTTGCTTACATTT+TGG + tig0032629:20659-20678 Msa1449520:intron 25.0%
! TCCAAAATGTAAGCAAAAAT+AGG - tig0032629:20663-20682 None:intergenic 25.0%
!!! ATCCTCAAATAGGTTTTAAA+TGG + tig0032629:20758-20777 Msa1449520:intron 25.0%
!! TTCCATTTAAAACCTATTTG+AGG - tig0032629:20763-20782 None:intergenic 25.0%
!!! GGAAAAACTTTATTTTTAGC+AGG + tig0032629:20779-20798 Msa1449520:intron 25.0%
!! GTCAGTTTCATTTTCAAAAT+TGG - tig0032629:21192-21211 None:intergenic 25.0%
!! AAATGAAACTGACATTGATT+TGG + tig0032629:21199-21218 Msa1449520:CDS 25.0%
! ATATGCATATCTGTCAAATA+TGG - tig0032629:21856-21875 None:intergenic 25.0%
!!! TATTTTGACAACAATTTGGA+TGG + tig0032629:21959-21978 Msa1449520:intron 25.0%
! GTTAATGCAGTTCAAATATA+TGG + tig0032629:21981-22000 Msa1449520:intron 25.0%
!! GTTGAAAATACAAGATTTTC+AGG - tig0032629:22143-22162 None:intergenic 25.0%
! ATTTGAACACCTGAAAATTA+TGG + tig0032629:22204-22223 Msa1449520:intron 25.0%
! TATATTTATTAACCATCCAC+TGG + tig0032629:22270-22289 Msa1449520:intron 25.0%
! TTGTTGTCAAATTTGTCAAA+AGG + tig0032629:22344-22363 Msa1449520:intron 25.0%
!! TTATAATGTGTTGATGTCTT+TGG + tig0032629:22390-22409 Msa1449520:intron 25.0%
!! AAATCTAAAGTGAAACTAGT+AGG - tig0032629:22558-22577 None:intergenic 25.0%
! AGGTTATTACAATATTTCCA+TGG - tig0032629:22884-22903 None:intergenic 25.0%
! TAACTCATAAAGTTAGTTAC+AGG - tig0032629:23101-23120 None:intergenic 25.0%
! TAACTTTATGAGTTAGTTAC+AGG + tig0032629:23106-23125 Msa1449520:intron 25.0%
!! GAATTTTCAATCAAATAAGC+AGG - tig0032629:23336-23355 None:intergenic 25.0%
!!! ACATTTTAACCATAAGAACT+GGG - tig0032629:23413-23432 None:intergenic 25.0%
!!! AACATTTTAACCATAAGAAC+TGG - tig0032629:23414-23433 None:intergenic 25.0%
! GTTTGTATATTGTTCATTGT+AGG + tig0032629:23593-23612 Msa1449520:intron 25.0%
! ACAGTGCGTATTAAAATTTA+TGG + tig0032629:23826-23845 Msa1449520:intron 25.0%
!!! AATTGCATTCATTGACTTAA+TGG + tig0032629:23893-23912 Msa1449520:intron 25.0%
! ATACATATATTGTCTTGCTT+AGG + tig0032629:24017-24036 Msa1449520:CDS 25.0%
!! TTGATGCTTGACTTTTAAAT+GGG - tig0032629:24061-24080 None:intergenic 25.0%
! CTAAAAATCAAACTATCTAC+TGG - tig0032629:24328-24347 None:intergenic 25.0%
!!! TTTATTTTTTTTGGTAGGGT+CGG + tig0032629:24428-24447 Msa1449520:intron 25.0%
!!! CTCAAATTGTTTTGCTAAAT+GGG + tig0032629:24644-24663 Msa1449520:intron 25.0%
! TATACACTTACTGATAGTAA+AGG - tig0032629:24886-24905 None:intergenic 25.0%
! GATCAATACAAGTTTATGTA+AGG - tig0032629:24909-24928 None:intergenic 25.0%
!! TGATTCAATTGGAATTTGTT+TGG + tig0032629:24934-24953 Msa1449520:intron 25.0%
! TAAATTACCCTTATGTTTCT+AGG - tig0032629:25022-25041 None:intergenic 25.0%
!! GTTATGTAGAATCATTTTGT+CGG + tig0032629:25147-25166 Msa1449520:intron 25.0%
!! TTATGTAGAATCATTTTGTC+GGG + tig0032629:25148-25167 Msa1449520:intron 25.0%
!!! AAAATTCAAGTTGATAGCTA+TGG - tig0032629:25267-25286 None:intergenic 25.0%
!! TGAATAACTTGTCATTTCTT+AGG + tig0032629:25588-25607 Msa1449520:intron 25.0%
! CAATTGGAAGAAAAAAGATA+CGG - tig0032629:25846-25865 None:intergenic 25.0%
! TTTGTGAGACTTAAAACAAT+TGG - tig0032629:25862-25881 None:intergenic 25.0%
!! TTATTATTGCCTTATTCTTC+TGG + tig0032629:25925-25944 Msa1449520:intron 25.0%
!!! AACTTGCTACAATTGTAAAA+GGG - tig0032629:26018-26037 None:intergenic 25.0%
!!! TAACTTGCTACAATTGTAAA+AGG - tig0032629:26019-26038 None:intergenic 25.0%
!! TTTTACAATTGTAGCAAGTT+AGG + tig0032629:26018-26037 Msa1449520:intron 25.0%
! AAGTTGCAAAAATTACTAAC+AGG - tig0032629:26088-26107 None:intergenic 25.0%
!!! TATGCAGTCTAAAATTTTGT+TGG + tig0032629:26764-26783 Msa1449520:intron 25.0%
! ATTTACAAGTACTTCTACAA+TGG - tig0032629:26864-26883 None:intergenic 25.0%
! ACATTCAAATACATTATCCA+AGG - tig0032629:26899-26918 None:intergenic 25.0%
! CTTGTAAATATATACTGAAG+TGG + tig0032629:26926-26945 Msa1449520:intron 25.0%
! AATGATGATAGGGTAAAATA+TGG + tig0032629:27185-27204 Msa1449520:three_prime_UTR 25.0%
!!! ATATACACATTTGATTTGTG+GGG - tig0032629:27283-27302 None:intergenic 25.0%
!!! GATATACACATTTGATTTGT+GGG - tig0032629:27284-27303 None:intergenic 25.0%
!!! AGATATACACATTTGATTTG+TGG - tig0032629:27285-27304 None:intergenic 25.0%
! AAGCTTAATGAGTCATTTAT+TGG + tig0032629:27314-27333 Msa1449520:three_prime_UTR 25.0%
! TGAAGAGAAGATTTTGTTAC+GGG - tig0032629:17826-17845 None:intergenic 30.0%
TAGACACGTATGATTACATT+CGG + tig0032629:18372-18391 Msa1449520:intron 30.0%
CTATAGACTACTCAAACAAA+GGG - tig0032629:18670-18689 None:intergenic 30.0%
TCTATAGACTACTCAAACAA+AGG - tig0032629:18671-18690 None:intergenic 30.0%
TTTGTTTGAGTAGTCTATAG+AGG + tig0032629:18670-18689 Msa1449520:intron 30.0%
CGTTTATCTTATAAGTGCTA+AGG - tig0032629:18940-18959 None:intergenic 30.0%
!! CACATTAATAAGGCTTTGTT+TGG - tig0032629:19007-19026 None:intergenic 30.0%
! TTTTTGTGTTCATAATGCAC+TGG + tig0032629:19029-19048 Msa1449520:intron 30.0%
AATATAATGACGATAGAGCT+AGG + tig0032629:19093-19112 Msa1449520:intron 30.0%
! TTCTAACACTTAACTGATTC+GGG - tig0032629:19221-19240 None:intergenic 30.0%
CTTCTAACACTTAACTGATT+CGG - tig0032629:19222-19241 None:intergenic 30.0%
! TTAGTTCTTCTCATTACTGT+TGG + tig0032629:19253-19272 Msa1449520:intron 30.0%
ATAAGAACTCAAAGGTTCAA+TGG - tig0032629:19526-19545 None:intergenic 30.0%
GACATATTCAAGGGATTATA+CGG - tig0032629:19645-19664 None:intergenic 30.0%
TATAATCCCTTGAATATGTC+TGG + tig0032629:19645-19664 Msa1449520:CDS 30.0%
ATAATCCCTTGAATATGTCT+GGG + tig0032629:19646-19665 Msa1449520:CDS 30.0%
GACATGTTAAAGGTTTGTAT+TGG + tig0032629:19670-19689 Msa1449520:CDS 30.0%
ATGTTAAAGGTTTGTATTGG+TGG + tig0032629:19673-19692 Msa1449520:CDS 30.0%
ATGATAAAATGAAGTCTGCT+GGG + tig0032629:19745-19764 Msa1449520:CDS 30.0%
!! TTCTAAAGCCATATACTTTC+CGG - tig0032629:19781-19800 None:intergenic 30.0%
ATCATCACTTGAAGAATCTT+GGG + tig0032629:19938-19957 Msa1449520:CDS 30.0%
AACCAAACTATTTCATCATG+CGG - tig0032629:20017-20036 None:intergenic 30.0%
ATAGCTCAGATGTGTTAATT+GGG + tig0032629:20201-20220 Msa1449520:CDS 30.0%
AAAATACTCTTGCAACATTC+TGG + tig0032629:20233-20252 Msa1449520:CDS 30.0%
! ATTCTGGAAGTTACAAGTTA+TGG + tig0032629:20249-20268 Msa1449520:CDS 30.0%
TTCACGCAAAAATAAGAAGA+GGG - tig0032629:20417-20436 None:intergenic 30.0%
ATTCACGCAAAAATAAGAAG+AGG - tig0032629:20418-20437 None:intergenic 30.0%
! TTATCTTGTTTGAACAGACT+TGG + tig0032629:20467-20486 Msa1449520:intron 30.0%
!!! TTTTTTCCCTTAAAAGTGGT+TGG + tig0032629:20553-20572 Msa1449520:intron 30.0%
!! CATTTTCCAACCACTTTTAA+GGG - tig0032629:20562-20581 None:intergenic 30.0%
!! TCATTTTCCAACCACTTTTA+AGG - tig0032629:20563-20582 None:intergenic 30.0%
!!! CTGTCATTTTTATCCATTGA+TGG + tig0032629:20617-20636 Msa1449520:intron 30.0%
ATTACTAAGTGACACAATCA+TGG - tig0032629:20710-20729 None:intergenic 30.0%
ATTTCAGAAGATCCTCAAAT+AGG + tig0032629:20748-20767 Msa1449520:intron 30.0%
AGAACCTTTGTCTAAAGATA+TGG + tig0032629:21157-21176 Msa1449520:CDS 30.0%
!! AACTGACATTGATTTGGTTA+TGG + tig0032629:21205-21224 Msa1449520:CDS 30.0%
AAATTCTCAGTATCATCTTC+AGG - tig0032629:21269-21288 None:intergenic 30.0%
TGGGAATTGATATTAATGCT+GGG + tig0032629:21300-21319 Msa1449520:CDS 30.0%
CATGATGTTTGTAATGAAAC+TGG - tig0032629:21527-21546 None:intergenic 30.0%
ACCATAGAAGTCAATGAATT+GGG - tig0032629:21714-21733 None:intergenic 30.0%
!! AATTCATTGACTTCTATGGT+GGG + tig0032629:21714-21733 Msa1449520:CDS 30.0%
! CGTCTCAATTGTAAGTTTTT+AGG + tig0032629:21741-21760 Msa1449520:intron 30.0%
AGGTGTAAATATCACAACTT+AGG + tig0032629:21761-21780 Msa1449520:intron 30.0%
TGGTTAACACTGTTTAAATG+AGG - tig0032629:22306-22325 None:intergenic 30.0%
AACTTCTCTAACATAGAATC+TGG - tig0032629:22495-22514 None:intergenic 30.0%
CTGATATGATGAAATTCGTA+CGG + tig0032629:22604-22623 Msa1449520:CDS 30.0%
AAAATGAATTCTTCTAACCG+TGG + tig0032629:22714-22733 Msa1449520:CDS 30.0%
AAATGAATTCTTCTAACCGT+GGG + tig0032629:22715-22734 Msa1449520:CDS 30.0%
TCTCTTAAAAAGTGATAGAC+AGG + tig0032629:22767-22786 Msa1449520:CDS 30.0%
TATAGTTGTAGAATGAATCC+TGG - tig0032629:22975-22994 None:intergenic 30.0%
CTGTCTATATATAGTCTTCA+AGG - tig0032629:23069-23088 None:intergenic 30.0%
CTATATATAGACAGACTTCA+TGG + tig0032629:23075-23094 Msa1449520:intron 30.0%
! TAACTTGTGTTAGTTACAGT+TGG + tig0032629:23179-23198 Msa1449520:intron 30.0%
CATAGTATAGCTCTTTATCA+AGG - tig0032629:23208-23227 None:intergenic 30.0%
GGGAGAAAAATATAACATGT+TGG - tig0032629:23393-23412 None:intergenic 30.0%
! TATTTTTCTCCCAGTTCTTA+TGG + tig0032629:23401-23420 Msa1449520:intron 30.0%
AAATGAAAAGCTGATCAAAG+AGG + tig0032629:23435-23454 Msa1449520:intron 30.0%
AATGAAAAGCTGATCAAAGA+GGG + tig0032629:23436-23455 Msa1449520:intron 30.0%
CTTACCATTTACAACAAATG+AGG - tig0032629:23540-23559 None:intergenic 30.0%
CAATATTGATCTTGCAAGAA+AGG + tig0032629:23662-23681 Msa1449520:CDS 30.0%
AGATAATACAGTACATACCT+CGG - tig0032629:23727-23746 None:intergenic 30.0%
!! ATTCATTGACTTAATGGAGT+AGG + tig0032629:23899-23918 Msa1449520:intron 30.0%
! TAAATATAGAAGAGGTGCAT+TGG - tig0032629:23934-23953 None:intergenic 30.0%
ATGCACCTCTTCTATATTTA+TGG + tig0032629:23934-23953 Msa1449520:CDS 30.0%
GCATACCATAAATATAGAAG+AGG - tig0032629:23942-23961 None:intergenic 30.0%
ATATTTATGGTATGCTGAAG+TGG + tig0032629:23947-23966 Msa1449520:CDS 30.0%
ATATTGTCTTGCTTAGGAAA+TGG + tig0032629:24023-24042 Msa1449520:CDS 30.0%
! TGATGCTTGACTTTTAAATG+GGG - tig0032629:24060-24079 None:intergenic 30.0%
! CTTGATGCTTGACTTTTAAA+TGG - tig0032629:24062-24081 None:intergenic 30.0%
TGAGAACAGTATTATCATCT+TGG + tig0032629:24123-24142 Msa1449520:CDS 30.0%
! TTTGGATCAAGCTTTTACTA+TGG + tig0032629:24241-24260 Msa1449520:CDS 30.0%
TCAACTTTATAAGCTTACAG+TGG - tig0032629:24351-24370 None:intergenic 30.0%
!!! TTATTTTTTTTGGTAGGGTC+GGG + tig0032629:24429-24448 Msa1449520:intron 30.0%
AATACTTGGGTGAAATAGAT+AGG + tig0032629:24460-24479 Msa1449520:intron 30.0%
ATACTTGGGTGAAATAGATA+GGG + tig0032629:24461-24480 Msa1449520:intron 30.0%
!!! GAAGAAATTGGGTGTTTTTT+AGG - tig0032629:24614-24633 None:intergenic 30.0%
CCATTTAGCAAAACAATTTG+AGG - tig0032629:24646-24665 None:intergenic 30.0%
!! CCTCAAATTGTTTTGCTAAA+TGG + tig0032629:24643-24662 Msa1449520:intron 30.0%
AAATAAGTAGAGCCTACAAA+AGG + tig0032629:24732-24751 Msa1449520:intron 30.0%
! AATTGTCGAGTGAACTTTTT+GGG - tig0032629:24797-24816 None:intergenic 30.0%
AAAAAGTTCACTCGACAATT+GGG + tig0032629:24797-24816 Msa1449520:intron 30.0%
! AATCATTTTGTTCTGCAGAA+AGG + tig0032629:25236-25255 Msa1449520:intron 30.0%
!! TTTAAAAGTTCTGGACTGAA+GGG - tig0032629:25385-25404 None:intergenic 30.0%
!!! TTTTAAAAGTTCTGGACTGA+AGG - tig0032629:25386-25405 None:intergenic 30.0%
! TTCAGTCCAGAACTTTTAAA+AGG + tig0032629:25385-25404 Msa1449520:CDS 30.0%
!! ACTACACCTTTTAAAAGTTC+TGG - tig0032629:25394-25413 None:intergenic 30.0%
!! AGAACTTTTAAAAGGTGTAG+TGG + tig0032629:25393-25412 Msa1449520:CDS 30.0%
ACACAACGTCTAATAAATTG+CGG + tig0032629:25431-25450 Msa1449520:CDS 30.0%
! ATGCTTTTAATCATAGTCTC+TGG + tig0032629:25508-25527 Msa1449520:intron 30.0%
! TGCTTTTAATCATAGTCTCT+GGG + tig0032629:25509-25528 Msa1449520:intron 30.0%
AGATTAATGCATGAGAGAAA+GGG - tig0032629:25893-25912 None:intergenic 30.0%
AAGATTAATGCATGAGAGAA+AGG - tig0032629:25894-25913 None:intergenic 30.0%
ATTTACAAGCCAGAAGAATA+AGG - tig0032629:25937-25956 None:intergenic 30.0%
! ATTGTAGCAAGTTAGGTTTT+TGG + tig0032629:26025-26044 Msa1449520:intron 30.0%
AAAATTACTAACAGGACAGA+AGG - tig0032629:26080-26099 None:intergenic 30.0%
! AATCCGTGGATTATTTGAAA+GGG + tig0032629:26230-26249 Msa1449520:CDS 30.0%
TTTATGTAAATGTGTGTACC+AGG + tig0032629:26514-26533 Msa1449520:intron 30.0%
! GAAGTACTTGTAAATTCAGA+AGG + tig0032629:26869-26888 Msa1449520:intron 30.0%
TAAATTCAGAAGGTAATCCT+TGG + tig0032629:26879-26898 Msa1449520:intron 30.0%
!!! CTTTTGTTGTTCAATGATTG+TGG + tig0032629:26986-27005 Msa1449520:intron 30.0%
GTGTAAATTGAACATCTGAT+AGG + tig0032629:27102-27121 Msa1449520:intron 30.0%
TGTGCTATGAAATGATGATA+GGG + tig0032629:27175-27194 Msa1449520:three_prime_UTR 30.0%
GTTAGCACCCAATTTAAAAA+TGG - tig0032629:27386-27405 None:intergenic 30.0%
! GAAGAGAAGATTTTGTTACG+GGG - tig0032629:17825-17844 None:intergenic 35.0%
GATCGTGATAATCTTGCATT+TGG + tig0032629:18201-18220 Msa1449520:CDS 35.0%
TTGCATTTGGCTGTATCTAT+AGG + tig0032629:18214-18233 Msa1449520:CDS 35.0%
GGCTGTATCTATAGGTATAT+TGG + tig0032629:18222-18241 Msa1449520:intron 35.0%
! AGTGCTTCATAGGTTTTTGT+TGG + tig0032629:18457-18476 Msa1449520:intron 35.0%
!! GTGTGAATTTTGTGCTGTTA+GGG + tig0032629:18498-18517 Msa1449520:intron 35.0%
AGGGCTAATGATGCATTTAA+TGG + tig0032629:18517-18536 Msa1449520:intron 35.0%
TACTCAAACAAAGGGAATGT+TGG - tig0032629:18662-18681 None:intergenic 35.0%
TCTTTGCTCTGACTTCAATT+GGG + tig0032629:18693-18712 Msa1449520:intron 35.0%
TCTCTTAAACAGTCTCACAA+GGG - tig0032629:18789-18808 None:intergenic 35.0%
!!! CTTTAGAGTTTTGCAGGTTA+AGG + tig0032629:19119-19138 Msa1449520:intron 35.0%
!! GTTTCAATTTTCTGGGAACA+AGG - tig0032629:19325-19344 None:intergenic 35.0%
ATGGCACGATTAAAGTGATA+TGG + tig0032629:19442-19461 Msa1449520:intron 35.0%
! TTGTATTGGTGGAATCAAAG+TGG + tig0032629:19684-19703 Msa1449520:CDS 35.0%
AGATGTCGATATTGATGCTT+TGG + tig0032629:19722-19741 Msa1449520:CDS 35.0%
GATGATAAAATGAAGTCTGC+TGG + tig0032629:19744-19763 Msa1449520:CDS 35.0%
AACTCATCTTGTGTTGTATG+AGG - tig0032629:19852-19871 None:intergenic 35.0%
GATGTACCAACATCTGATAA+AGG - tig0032629:19879-19898 None:intergenic 35.0%
CATCATCACTTGAAGAATCT+TGG + tig0032629:19937-19956 Msa1449520:CDS 35.0%
ACCAAACTATTTCATCATGC+GGG - tig0032629:20016-20035 None:intergenic 35.0%
! GAAAATTAGCATTCTGGAGA+AGG + tig0032629:20112-20131 Msa1449520:CDS 35.0%
GATAGCTCAGATGTGTTAAT+TGG + tig0032629:20200-20219 Msa1449520:CDS 35.0%
AGATGTGTTAATTGGGAGAT+GGG + tig0032629:20208-20227 Msa1449520:CDS 35.0%
AATTCTTGCATGTTGTTCAG+AGG + tig0032629:20276-20295 Msa1449520:CDS 35.0%
AACTTTGTTCTTCCCATCAA+TGG - tig0032629:20633-20652 None:intergenic 35.0%
! AACGACTGTTTGAGCATTTT+TGG + tig0032629:20994-21013 Msa1449520:CDS 35.0%
!!! GAGCATTTTTGGAATAGTCA+TGG + tig0032629:21005-21024 Msa1449520:CDS 35.0%
ACCTTTGTCTAAAGATATGG+AGG + tig0032629:21160-21179 Msa1449520:CDS 35.0%
CCTTTGTCTAAAGATATGGA+GGG + tig0032629:21161-21180 Msa1449520:CDS 35.0%
!! TGACATTGATTTGGTTATGG+AGG + tig0032629:21208-21227 Msa1449520:CDS 35.0%
TATGGAGGATAATCAAGATG+AGG + tig0032629:21223-21242 Msa1449520:CDS 35.0%
CTGGGAATTGATATTAATGC+TGG + tig0032629:21299-21318 Msa1449520:CDS 35.0%
GGGAATTGATATTAATGCTG+GGG + tig0032629:21301-21320 Msa1449520:CDS 35.0%
ATTGATATTAATGCTGGGGA+TGG + tig0032629:21305-21324 Msa1449520:CDS 35.0%
TTGATATTAATGCTGGGGAT+GGG + tig0032629:21306-21325 Msa1449520:CDS 35.0%
AAGTTAATGACACTTTGACC+TGG + tig0032629:21333-21352 Msa1449520:CDS 35.0%
AAAAGAGGCTCGACTATATT+TGG + tig0032629:21685-21704 Msa1449520:CDS 35.0%
!! TCCCAATTCATTGACTTCTA+TGG + tig0032629:21710-21729 Msa1449520:CDS 35.0%
CACCATAGAAGTCAATGAAT+TGG - tig0032629:21715-21734 None:intergenic 35.0%
!! CAATTCATTGACTTCTATGG+TGG + tig0032629:21713-21732 Msa1449520:CDS 35.0%
AACCTAATACTTTGAACCAG+CGG - tig0032629:21823-21842 None:intergenic 35.0%
GCATATCTGTCAAATATGGA+AGG - tig0032629:21852-21871 None:intergenic 35.0%
CTAGAGAACTCCATTATTAG+TGG + tig0032629:21882-21901 Msa1449520:intron 35.0%
TCACATACACCTGAAAATCA+TGG - tig0032629:22081-22100 None:intergenic 35.0%
GGATAATTATGCTCAGTGAA+TGG + tig0032629:22225-22244 Msa1449520:intron 35.0%
AACAAAAGTCGACAAGAACT+TGG - tig0032629:22329-22348 None:intergenic 35.0%
!! CTGCTTCATTTTTCTTCTGT+AGG + tig0032629:22415-22434 Msa1449520:intron 35.0%
TTTCAACAAACAGTCCTACT+TGG + tig0032629:22439-22458 Msa1449520:CDS 35.0%
! GTGCTTTTGTCAAAACGTTA+TGG - tig0032629:22527-22546 None:intergenic 35.0%
TTCTATTAGGAAGTTCCATG+AGG + tig0032629:22577-22596 Msa1449520:CDS 35.0%
! TTTTCCACGTAATCACGTTT+TGG + tig0032629:22653-22672 Msa1449520:CDS 35.0%
AATGAATTCTTCTAACCGTG+GGG + tig0032629:22716-22735 Msa1449520:CDS 35.0%
AAATTACAGTTAGGGTTACC+AGG + tig0032629:22954-22973 Msa1449520:intron 35.0%
!! TCTGCCTCATTTGTTGTAAA+TGG + tig0032629:23533-23552 Msa1449520:intron 35.0%
!! TTGTAGGATGTTTTGTTGTG+TGG + tig0032629:23609-23628 Msa1449520:intron 35.0%
!! TGCAAGAAAGGTGTTTGATA+TGG + tig0032629:23674-23693 Msa1449520:CDS 35.0%
TGATATGGCATTGTTATCTG+TGG + tig0032629:23689-23708 Msa1449520:CDS 35.0%
GATAATACAGTACATACCTC+GGG - tig0032629:23726-23745 None:intergenic 35.0%
GTGTCTGTATATACAAGTGT+TGG - tig0032629:23808-23827 None:intergenic 35.0%
AAAGGAGGTTGTGTATACAT+AGG - tig0032629:23856-23875 None:intergenic 35.0%
GAGCTTGCAAATAACACTAA+CGG + tig0032629:23969-23988 Msa1449520:CDS 35.0%
GTATTATCATCTTGGTTTCG+TGG + tig0032629:24131-24150 Msa1449520:CDS 35.0%
ATGTTCTGCTTCATTGTTTG+AGG + tig0032629:24184-24203 Msa1449520:CDS 35.0%
ACAAATGAAGATGCATAACC+TGG - tig0032629:24272-24291 None:intergenic 35.0%
!! TCGGGTTGATTGAAATACTT+GGG + tig0032629:24447-24466 Msa1449520:intron 35.0%
TACTTGGGTGAAATAGATAG+GGG + tig0032629:24462-24481 Msa1449520:intron 35.0%
GGCTAAACTTCGAGTATTAA+AGG + tig0032629:24483-24502 Msa1449520:intron 35.0%
! GGTGTTGGATTGAAGAAATT+GGG - tig0032629:24625-24644 None:intergenic 35.0%
!! AGGTGTTGGATTGAAGAAAT+TGG - tig0032629:24626-24645 None:intergenic 35.0%
! AGCAAAACAATTTGAGGTGT+TGG - tig0032629:24640-24659 None:intergenic 35.0%
!! TTTTGGGTGCTTATAGAGAA+GGG - tig0032629:24781-24800 None:intergenic 35.0%
!!! TTTTTGGGTGCTTATAGAGA+AGG - tig0032629:24782-24801 None:intergenic 35.0%
! CAATTGTCGAGTGAACTTTT+TGG - tig0032629:24798-24817 None:intergenic 35.0%
CAAAAAGTTCACTCGACAAT+TGG + tig0032629:24796-24815 Msa1449520:intron 35.0%
AAAAGTTCACTCGACAATTG+GGG + tig0032629:24798-24817 Msa1449520:intron 35.0%
AGTCTGACCTAGAAACATAA+GGG + tig0032629:25012-25031 Msa1449520:intron 35.0%
GTGTGCTAATAGATAACTAG+TGG - tig0032629:25082-25101 None:intergenic 35.0%
ATTACATAAGGATGCTTCAG+AGG + tig0032629:25296-25315 Msa1449520:CDS 35.0%
AATCAGGTCTGATGAAAGTT+TGG + tig0032629:25329-25348 Msa1449520:CDS 35.0%
ATCAGGTCTGATGAAAGTTT+GGG + tig0032629:25330-25349 Msa1449520:CDS 35.0%
! TTAAAAGGTGTAGTGGAAGT+TGG + tig0032629:25400-25419 Msa1449520:CDS 35.0%
GCAATTTATTAGACGTTGTG+TGG - tig0032629:25432-25451 None:intergenic 35.0%
!!! TGTGTAGCTTTTTTTTCAGC+AGG + tig0032629:25650-25669 Msa1449520:intron 35.0%
!!! GTTTTTGGTTTCCTGCATAA+TGG + tig0032629:26040-26059 Msa1449520:intron 35.0%
! GAATCCGTGGATTATTTGAA+AGG + tig0032629:26229-26248 Msa1449520:CDS 35.0%
TTAAATACAAGTCCTCACCA+GGG - tig0032629:26381-26400 None:intergenic 35.0%
TTTAAATACAAGTCCTCACC+AGG - tig0032629:26382-26401 None:intergenic 35.0%
!! CTTATAGCTTTGAAGCTTTG+GGG - tig0032629:26418-26437 None:intergenic 35.0%
!! CCTTATAGCTTTGAAGCTTT+GGG - tig0032629:26419-26438 None:intergenic 35.0%
CCAAAGCTTCAAAGCTATAA+GGG + tig0032629:26417-26436 Msa1449520:intron 35.0%
AAACTGAACTCTGTTCTTAC+TGG + tig0032629:26567-26586 Msa1449520:CDS 35.0%
!!! AAGCTTTTTTTACCAGAGCA+TGG - tig0032629:26822-26841 None:intergenic 35.0%
GTGTGCTATGAAATGATGAT+AGG + tig0032629:27174-27193 Msa1449520:three_prime_UTR 35.0%
! ATTTTGTTACGGGGAAGACA+GGG - tig0032629:17816-17835 None:intergenic 40.0%
AGAAGAGGAAGAAGAAGAAG+CGG + tig0032629:18064-18083 Msa1449520:CDS 40.0%
! TCTGATGAGAGAAGTGGATT+TGG + tig0032629:18099-18118 Msa1449520:CDS 40.0%
CGGTTATGCCATTCATTCAA+AGG + tig0032629:18392-18411 Msa1449520:intron 40.0%
TTGGTGAGTGTATTGAATGC+TGG + tig0032629:18476-18495 Msa1449520:intron 40.0%
!! GGTGTGAATTTTGTGCTGTT+AGG + tig0032629:18497-18516 Msa1449520:intron 40.0%
TTAGAACCTTGGACCTAAAG+AGG - tig0032629:18628-18647 None:intergenic 40.0%
CATATGGAGGATTAGAACCT+TGG - tig0032629:18639-18658 None:intergenic 40.0%
ACAAAGGGAATGTTGGCATA+TGG - tig0032629:18655-18674 None:intergenic 40.0%
GTCTTTGCTCTGACTTCAAT+TGG + tig0032629:18692-18711 Msa1449520:intron 40.0%
CTTTGCTCTGACTTCAATTG+GGG + tig0032629:18694-18713 Msa1449520:intron 40.0%
TTTGCTCTGACTTCAATTGG+GGG + tig0032629:18695-18714 Msa1449520:intron 40.0%
CTCTCTTAAACAGTCTCACA+AGG - tig0032629:18790-18809 None:intergenic 40.0%
TGTTCATAATGCACTGGACT+AGG + tig0032629:19035-19054 Msa1449520:intron 40.0%
!!! AGGCTTCTTTAGAGTTTTGC+AGG + tig0032629:19113-19132 Msa1449520:intron 40.0%
GAGAAGAACTAAGAAGTCAC+AGG - tig0032629:19245-19264 None:intergenic 40.0%
ATGGCGCGATTAAAGTGATA+TGG + tig0032629:19461-19480 Msa1449520:intron 40.0%
ATGGCGCGATTAAAGTGATA+TGG + tig0032629:19461-19480 Msa1449520:intron 40.0%
TGGAATCAAAGTGGTTCACT+TGG + tig0032629:19693-19712 Msa1449520:CDS 40.0%
GGAATCAAAGTGGTTCACTT+GGG + tig0032629:19694-19713 Msa1449520:CDS 40.0%
GAATCAAAGTGGTTCACTTG+GGG + tig0032629:19695-19714 Msa1449520:CDS 40.0%
! ATACTGGTCCGGAAAGTATA+TGG + tig0032629:19770-19789 Msa1449520:CDS 40.0%
!!! ATTTTGGAGCAACAAGACGT+AGG - tig0032629:19824-19843 None:intergenic 40.0%
! GTTGTATGAGGAGACGATTT+TGG - tig0032629:19840-19859 None:intergenic 40.0%
TCAGATGTTGGTACATCTCA+AGG + tig0032629:19882-19901 Msa1449520:CDS 40.0%
GGAGTTCAACAAACTGACAA+GGG + tig0032629:19986-20005 Msa1449520:CDS 40.0%
ACCCGCATGATGAAATAGTT+TGG + tig0032629:20012-20031 Msa1449520:CDS 40.0%
! TTTTGCCGAGTTCCAAGATA+AGG + tig0032629:20040-20059 Msa1449520:CDS 40.0%
TGCAACCTTATCTTGGAACT+CGG - tig0032629:20048-20067 None:intergenic 40.0%
ATAAGGTTGCAGGAATGCAA+CGG + tig0032629:20057-20076 Msa1449520:CDS 40.0%
CAGATGTGTTAATTGGGAGA+TGG + tig0032629:20207-20226 Msa1449520:CDS 40.0%
GAGGAATTTCTCCAAGTTCA+AGG + tig0032629:20295-20314 Msa1449520:CDS 40.0%
AACCATGGAAACCTTGAACT+TGG - tig0032629:20309-20328 None:intergenic 40.0%
AGTTCAAGGTTTCCATGGTT+AGG + tig0032629:20309-20328 Msa1449520:CDS 40.0%
AGCATACATCTTCCTAACCA+TGG - tig0032629:20324-20343 None:intergenic 40.0%
! ATTGAAGCTTTGTCTGCTTC+AGG + tig0032629:20350-20369 Msa1449520:CDS 40.0%
TCAAGCTGATGATTCTTCAC+CGG + tig0032629:20806-20825 Msa1449520:CDS 40.0%
AGTTCTTGCTGAACAATTGC+AGG - tig0032629:20834-20853 None:intergenic 40.0%
TCAGTCTTTGCAGATTTGAG+TGG + tig0032629:20874-20893 Msa1449520:CDS 40.0%
!! AGTTGCCACTGCTTTATTTC+AGG + tig0032629:20914-20933 Msa1449520:CDS 40.0%
TTCAGCCTGAAATAAAGCAG+TGG - tig0032629:20922-20941 None:intergenic 40.0%
! AATAGTCATGGTGCTAGAGT+CGG + tig0032629:21017-21036 Msa1449520:CDS 40.0%
GAGCTCTCACATGAAAATGA+AGG + tig0032629:21113-21132 Msa1449520:CDS 40.0%
CTCTCACATGAAAATGAAGG+CGG + tig0032629:21116-21135 Msa1449520:CDS 40.0%
CCCTCCATATCTTTAGACAA+AGG - tig0032629:21164-21183 None:intergenic 40.0%
GTCTAAAGATATGGAGGGTA+CGG + tig0032629:21166-21185 Msa1449520:CDS 40.0%
!! TGAGAATTTGCTAAAGCTGC+TGG + tig0032629:21280-21299 Msa1449520:CDS 40.0%
!! GAGAATTTGCTAAAGCTGCT+GGG + tig0032629:21281-21300 Msa1449520:CDS 40.0%
TGATATTAATGCTGGGGATG+GGG + tig0032629:21307-21326 Msa1449520:CDS 40.0%
ACACTTTGACCTGGATCAAA+TGG + tig0032629:21342-21361 Msa1449520:CDS 40.0%
TTCTTCTGACCATTTGATCC+AGG - tig0032629:21354-21373 None:intergenic 40.0%
! CTTCTAGAGATTGTGATCAG+TGG + tig0032629:21378-21397 Msa1449520:CDS 40.0%
ATGCCTATTCGAAGGAAGTT+AGG + tig0032629:21401-21420 Msa1449520:CDS 40.0%
CTACCTAACTTCCTTCGAAT+AGG - tig0032629:21407-21426 None:intergenic 40.0%
CTATTCGAAGGAAGTTAGGT+AGG + tig0032629:21405-21424 Msa1449520:intron 40.0%
GAAGAGGTTGTATCTGTTCA+TGG - tig0032629:21572-21591 None:intergenic 40.0%
! CTTTTGTGTTCAGGGTGAAA+AGG - tig0032629:21670-21689 None:intergenic 40.0%
TTTCACCCTGAACACAAAAG+AGG + tig0032629:21670-21689 Msa1449520:CDS 40.0%
AGCACATCAGACTCTTAACA+TGG - tig0032629:21799-21818 None:intergenic 40.0%
!! TACCGCTGGTTCAAAGTATT+AGG + tig0032629:21818-21837 Msa1449520:intron 40.0%
AAGGACAGAGCCACTAATAA+TGG - tig0032629:21895-21914 None:intergenic 40.0%
! GGTGTTATGTGGATGGTTAT+TGG - tig0032629:22053-22072 None:intergenic 40.0%
!! TCATGGTTCATGGTGTTATG+TGG - tig0032629:22064-22083 None:intergenic 40.0%
! CACCATGAACCATGATTTTC+AGG + tig0032629:22069-22088 Msa1449520:intron 40.0%
CACCTGAAAATCATGGTTCA+TGG - tig0032629:22074-22093 None:intergenic 40.0%
ATGAGGTTAATTACGTCCAG+TGG - tig0032629:22289-22308 None:intergenic 40.0%
AAAAGTCGACAAGAACTTGG+TGG - tig0032629:22326-22345 None:intergenic 40.0%
CATCATATCAGCATTCCTCA+TGG - tig0032629:22595-22614 None:intergenic 40.0%
TCTTCCAAAACGTGATTACG+TGG - tig0032629:22660-22679 None:intergenic 40.0%
AGCATCTACAACTATTGCCA+TGG + tig0032629:22864-22883 Msa1449520:intron 40.0%
AGCTGCATGATACTTAGTGT+AGG - tig0032629:23154-23173 None:intergenic 40.0%
TTAAGCATACACACAGCGTA+TGG - tig0032629:23240-23259 None:intergenic 40.0%
CATTTCCTCAAGCAACAAGA+TGG - tig0032629:23465-23484 None:intergenic 40.0%
ATGGCATTGTTATCTGTGGA+AGG + tig0032629:23693-23712 Msa1449520:CDS 40.0%
TGGCATTGTTATCTGTGGAA+GGG + tig0032629:23694-23713 Msa1449520:CDS 40.0%
CTGTATTATCTGCTGCAACT+TGG + tig0032629:23736-23755 Msa1449520:intron 40.0%
CTTGCAAATAACACTAACGG+TGG + tig0032629:23972-23991 Msa1449520:CDS 40.0%
TTGTTTGAGGAGCTAACTTC+TGG + tig0032629:24197-24216 Msa1449520:CDS 40.0%
!! GTCGGGTTGATTGAAATACT+TGG + tig0032629:24446-24465 Msa1449520:intron 40.0%
! GACGTTTAGAGCATATACGA+CGG + tig0032629:24514-24533 Msa1449520:intron 40.0%
! TTTAGAGCATATACGACGGA+TGG + tig0032629:24518-24537 Msa1449520:intron 40.0%
CTACTTAGGAACCCAAATAG+GGG - tig0032629:24548-24567 None:intergenic 40.0%
CCTACTTAGGAACCCAAATA+GGG - tig0032629:24549-24568 None:intergenic 40.0%
ACCTACTTAGGAACCCAAAT+AGG - tig0032629:24550-24569 None:intergenic 40.0%
TGTGCATGTATGACCTACTT+AGG - tig0032629:24562-24581 None:intergenic 40.0%
AAAGTTCACTCGACAATTGG+GGG + tig0032629:24799-24818 Msa1449520:intron 40.0%
! TGGAATTTGTTTGGTCAGCT+TGG + tig0032629:24943-24962 Msa1449520:intron 40.0%
! GGAATTTGTTTGGTCAGCTT+GGG + tig0032629:24944-24963 Msa1449520:intron 40.0%
CAGTCTGACCTAGAAACATA+AGG + tig0032629:25011-25030 Msa1449520:intron 40.0%
GTTATCTATTAGCACACACG+AGG + tig0032629:25085-25104 Msa1449520:intron 40.0%
GTGAGCTAAATGCTTAGCTT+TGG + tig0032629:25121-25140 Msa1449520:intron 40.0%
TATTAGACGTTGTGTGGAAG+TGG - tig0032629:25426-25445 None:intergenic 40.0%
CAACGTCTAATAAATTGCGG+CGG + tig0032629:25434-25453 Msa1449520:CDS 40.0%
ACTTGTAACAGCGTTCATCT+AGG - tig0032629:25462-25481 None:intergenic 40.0%
TTCCTGCATAATGGTGTGTA+TGG + tig0032629:26049-26068 Msa1449520:intron 40.0%
GAAAACCATCTGTAGTTGTC+TGG + tig0032629:26160-26179 Msa1449520:intron 40.0%
AAAAGCCAGACAACTACAGA+TGG - tig0032629:26168-26187 None:intergenic 40.0%
TTGTCATACGAGATGTCTAG+AGG + tig0032629:26192-26211 Msa1449520:CDS 40.0%
CAAATAATCCACGGATTCTG+TGG - tig0032629:26227-26246 None:intergenic 40.0%
CTGCCCTTTCAAATAATCCA+CGG - tig0032629:26236-26255 None:intergenic 40.0%
TAAATACAAGTCCTCACCAG+GGG - tig0032629:26380-26399 None:intergenic 40.0%
CCCAAAGCTTCAAAGCTATA+AGG + tig0032629:26416-26435 Msa1449520:intron 40.0%
!! CCCTTATAGCTTTGAAGCTT+TGG - tig0032629:26420-26439 None:intergenic 40.0%
AAGCTTCAAAGCTATAAGGG+AGG + tig0032629:26420-26439 Msa1449520:intron 40.0%
ATGTGTGTACCAGGTCAAAA+CGG + tig0032629:26523-26542 Msa1449520:intron 40.0%
AAGGTCATGACTCTTGCAAA+AGG - tig0032629:26665-26684 None:intergenic 40.0%
CCAAGAGCAGATCAATAAGT+CGG - tig0032629:26701-26720 None:intergenic 40.0%
ACATCAGTTCGCATCATATC+AGG - tig0032629:26724-26743 None:intergenic 40.0%
TCAAGTTTACAACCATGCTC+TGG + tig0032629:26807-26826 Msa1449520:intron 40.0%
GGAAAGAAAAAGCAAGCATC+TGG + tig0032629:26947-26966 Msa1449520:intron 40.0%
CAGCCATGTGAATATCTGAT+AGG + tig0032629:27136-27155 Msa1449520:three_prime_UTR 40.0%
GCTCCTATCAGATATTCACA+TGG - tig0032629:27142-27161 None:intergenic 40.0%
AATATCTGATAGGAGCAGAG+TGG + tig0032629:27146-27165 Msa1449520:three_prime_UTR 40.0%
!! ACATTTGATTTGTGGGGTCT+AGG - tig0032629:27277-27296 None:intergenic 40.0%
! GAGTGAAGGTTTTGCTTCGT+CGG - tig0032629:17791-17810 None:intergenic 45.0%
! GATTTTGTTACGGGGAAGAC+AGG - tig0032629:17817-17836 None:intergenic 45.0%
TTACTGAGCCATTGAGGAAG+CGG - tig0032629:17862-17881 None:intergenic 45.0%
CTAGAGTTACTGAGCCATTG+AGG - tig0032629:17868-17887 None:intergenic 45.0%
AGCGACATCGTCATTGATGA+CGG - tig0032629:17908-17927 None:intergenic 45.0%
CAGCGATGAAAATCGACCTA+AGG + tig0032629:17981-18000 Msa1449520:CDS 45.0%
ATCGCGTAAGACTTCTCCTT+AGG - tig0032629:18000-18019 None:intergenic 45.0%
!! TTACGCGATTCTGGAATCCT+CGG + tig0032629:18011-18030 Msa1449520:CDS 45.0%
!! GATTCTGGAATCCTCGGAAT+CGG + tig0032629:18017-18036 Msa1449520:CDS 45.0%
!! GGAATCGGATGGTAATGGAA+TGG + tig0032629:18032-18051 Msa1449520:CDS 45.0%
GAATGGAGAGAGAGAAGAAG+AGG + tig0032629:18049-18068 Msa1449520:CDS 45.0%
GATAGGTCTGATGAGAGAAG+TGG + tig0032629:18093-18112 Msa1449520:CDS 45.0%
! AGAGAAGTGGATTTGGTTCG+AGG + tig0032629:18106-18125 Msa1449520:CDS 45.0%
GAAATCGCGTGTTCAAGCTT+GGG + tig0032629:18128-18147 Msa1449520:CDS 45.0%
TGTTCAAGCTTGGGCTGATT+CGG + tig0032629:18137-18156 Msa1449520:CDS 45.0%
! CACGCTTCTATCAGAAGTGT+CGG - tig0032629:18348-18367 None:intergenic 45.0%
CGACGTGTCAGTGTTGTATA+CGG + tig0032629:18426-18445 Msa1449520:intron 45.0%
GGTGCATGTTAGTGCTTCAT+AGG + tig0032629:18447-18466 Msa1449520:intron 45.0%
! TTTAGGGTTTGTAACCCGCA+TGG + tig0032629:18562-18581 Msa1449520:intron 45.0%
TTAGGGTTTGTAACCCGCAT+GGG + tig0032629:18563-18582 Msa1449520:intron 45.0%
! GTGGTGTAAGTTTGAGACGT+AGG + tig0032629:18594-18613 Msa1449520:intron 45.0%
GTAGGTGTTTGCTCCTCTTT+AGG + tig0032629:18612-18631 Msa1449520:intron 45.0%
TTTGCTCCTCTTTAGGTCCA+AGG + tig0032629:18619-18638 Msa1449520:intron 45.0%
AAGGGAATGTTGGCATATGG+AGG - tig0032629:18652-18671 None:intergenic 45.0%
TCTGACTTCAATTGGGGGAT+GGG + tig0032629:18700-18719 Msa1449520:intron 45.0%
CTCATTACTGTTGGTCACCT+AGG + tig0032629:19262-19281 Msa1449520:intron 45.0%
TCACCTAGGCAGAAGTTCAA+TGG + tig0032629:19276-19295 Msa1449520:intron 45.0%
CACCTAGGCAGAAGTTCAAT+GGG + tig0032629:19277-19296 Msa1449520:intron 45.0%
ACCTAGGCAGAAGTTCAATG+GGG + tig0032629:19278-19297 Msa1449520:intron 45.0%
CAGAAGTTCAATGGGGATTG+CGG + tig0032629:19285-19304 Msa1449520:intron 45.0%
TTCAATGGGGATTGCGGATT+TGG + tig0032629:19291-19310 Msa1449520:intron 45.0%
TCAATGGGGATTGCGGATTT+GGG + tig0032629:19292-19311 Msa1449520:intron 45.0%
CATGCAGAATGGATATTGCC+CGG + tig0032629:19613-19632 Msa1449520:intron 45.0%
AGGGATTATACGGTTTGTGC+CGG - tig0032629:19635-19654 None:intergenic 45.0%
TGTCGCCCAGACATATTCAA+GGG - tig0032629:19654-19673 None:intergenic 45.0%
ATGTCGCCCAGACATATTCA+AGG - tig0032629:19655-19674 None:intergenic 45.0%
ATGTCTGGGCGACATGTTAA+AGG + tig0032629:19660-19679 Msa1449520:CDS 45.0%
!! TGTCAGTTTGTTGAACTCCC+TGG - tig0032629:19985-20004 None:intergenic 45.0%
GGGAGTTCAACAAACTGACA+AGG + tig0032629:19985-20004 Msa1449520:CDS 45.0%
GAGTTCCAAGATAAGGTTGC+AGG + tig0032629:20047-20066 Msa1449520:CDS 45.0%
GCATTCCTGCAACCTTATCT+TGG - tig0032629:20055-20074 None:intergenic 45.0%
CTCCAAGTTCAAGGTTTCCA+TGG + tig0032629:20304-20323 Msa1449520:CDS 45.0%
GGATGCTCAGATCACTAACT+TGG + tig0032629:20488-20507 Msa1449520:intron 45.0%
TGCTGAACAATTGCAGGATC+CGG - tig0032629:20828-20847 None:intergenic 45.0%
TCTTTGCAGATTTGAGTGGC+AGG + tig0032629:20878-20897 Msa1449520:CDS 45.0%
TGGAGAAAGAGGAGGAAACT+AGG + tig0032629:21072-21091 Msa1449520:CDS 45.0%
TCACATGAAAATGAAGGCGG+AGG + tig0032629:21119-21138 Msa1449520:CDS 45.0%
ATGAAAATGAAGGCGGAGGT+TGG + tig0032629:21123-21142 Msa1449520:CDS 45.0%
GATATTAATGCTGGGGATGG+GGG + tig0032629:21308-21327 Msa1449520:CDS 45.0%
ATCAGTGGATGCCTATTCGA+AGG + tig0032629:21393-21412 Msa1449520:CDS 45.0%
GAGTGCTTCACTAGTAGAAG+AGG - tig0032629:21588-21607 None:intergenic 45.0%
! TGAAGCACTCGAAACAGAAG+AGG + tig0032629:21598-21617 Msa1449520:CDS 45.0%
! TCGAGCCTCTTTTGTGTTCA+GGG - tig0032629:21678-21697 None:intergenic 45.0%
!! TGTCCTTCTTTGTTGGCTTC+TGG + tig0032629:21908-21927 Msa1449520:intron 45.0%
AAGCCAGAAGCCAACAAAGA+AGG - tig0032629:21914-21933 None:intergenic 45.0%
!! GGTTCATGGTGTTATGTGGA+TGG - tig0032629:22060-22079 None:intergenic 45.0%
GGTTAATTACGTCCAGTGGA+TGG - tig0032629:22285-22304 None:intergenic 45.0%
AGTGTGTTCTCTGTCCAAGT+AGG - tig0032629:22456-22475 None:intergenic 45.0%
GACAGAGAACACACTTAGCT+TGG + tig0032629:22461-22480 Msa1449520:CDS 45.0%
! AGAGAACACACTTAGCTTGG+AGG + tig0032629:22464-22483 Msa1449520:CDS 45.0%
GAGCAAGAAAGTAGAGAGAG+GGG - tig0032629:22801-22820 None:intergenic 45.0%
GGAGCAAGAAAGTAGAGAGA+GGG - tig0032629:22802-22821 None:intergenic 45.0%
AGGAGCAAGAAAGTAGAGAG+AGG - tig0032629:22803-22822 None:intergenic 45.0%
! ACAGGTGCTATGCTAAGCTA+CGG + tig0032629:23124-23143 Msa1449520:intron 45.0%
TGGTGTATATGCACGAAGAG+AGG + tig0032629:23629-23648 Msa1449520:CDS 45.0%
AATACAGTACATACCTCGGG+AGG - tig0032629:23723-23742 None:intergenic 45.0%
AACTGCTTAGAGCACGTCAA+GGG + tig0032629:24087-24106 Msa1449520:CDS 45.0%
AAATGACCAATCTGTCGCTC+TGG + tig0032629:24160-24179 Msa1449520:CDS 45.0%
AACATACCAGAGCGACAGAT+TGG - tig0032629:24169-24188 None:intergenic 45.0%
GCTAACTTCTGGATGTGATG+CGG + tig0032629:24208-24227 Msa1449520:CDS 45.0%
CTAACTTCTGGATGTGATGC+GGG + tig0032629:24209-24228 Msa1449520:CDS 45.0%
!!! TGATGCGGGCATTGAAGTTT+TGG + tig0032629:24223-24242 Msa1449520:CDS 45.0%
! GCTTTTACTATGGTGCTTCC+AGG + tig0032629:24251-24270 Msa1449520:CDS 45.0%
! CCCTATTTGGGTTCCTAAGT+AGG + tig0032629:24546-24565 Msa1449520:intron 45.0%
AGCCTACAAAAGGAAGCAAG+AGG + tig0032629:24742-24761 Msa1449520:intron 45.0%
GCCTACAAAAGGAAGCAAGA+GGG + tig0032629:24743-24762 Msa1449520:intron 45.0%
! ACCCTCTTGCTTCCTTTTGT+AGG - tig0032629:24747-24766 None:intergenic 45.0%
!! TATAGAGAAGGGTGTCTGGA+AGG - tig0032629:24770-24789 None:intergenic 45.0%
!! TGCTTATAGAGAAGGGTGTC+TGG - tig0032629:24774-24793 None:intergenic 45.0%
AGTTTGGGAATCCGTTTCTC+AGG + tig0032629:25345-25364 Msa1449520:CDS 45.0%
GTTTGGGAATCCGTTTCTCA+GGG + tig0032629:25346-25365 Msa1449520:CDS 45.0%
TGCCATACACACCATTATGC+AGG - tig0032629:26054-26073 None:intergenic 45.0%
TCATACGAGATGTCTAGAGG+TGG + tig0032629:26195-26214 Msa1449520:CDS 45.0%
TTTGCAGCTCAGTTGTACTG+TGG + tig0032629:26271-26290 Msa1449520:CDS 45.0%
TACTGTGGCGTTGCTACATT+GGG + tig0032629:26286-26305 Msa1449520:CDS 45.0%
AAAATACGTCGAGCTGCAGA+AGG - tig0032629:26336-26355 None:intergenic 45.0%
TCAAAACGGCTATGGTTGGA+TGG + tig0032629:26537-26556 Msa1449520:CDS 45.0%
AGTCGGATTCTCGACAACAA+AGG - tig0032629:26684-26703 None:intergenic 45.0%
CCGACTTATTGATCTGCTCT+TGG + tig0032629:26698-26717 Msa1449520:three_prime_UTR 45.0%
AACATATTGTGTCGCCCATC+CGG + tig0032629:27219-27238 Msa1449520:three_prime_UTR 45.0%
!!! CTTTTATTATTTATTTTTTT+TGG + tig0032629:24419-24438 Msa1449520:intron 5.0%
GGACCAAAAACCACCTCATC+CGG + tig0032629:17741-17760 Msa1449520:CDS 50.0%
! GAAGGTTTTGCTTCGTCGGA+CGG - tig0032629:17787-17806 None:intergenic 50.0%
CAACTTCTCCGCTTCCTCAA+TGG + tig0032629:17851-17870 Msa1449520:CDS 50.0%
!! GTCATTGATGACGGCGATGT+CGG - tig0032629:17899-17918 None:intergenic 50.0%
! TTTTCATCGTCGTCTGGTGG+CGG - tig0032629:17961-17980 None:intergenic 50.0%
! CTGTTTTCATCGTCGTCTGG+TGG - tig0032629:17964-17983 None:intergenic 50.0%
!! TCGCTGTTTTCATCGTCGTC+TGG - tig0032629:17967-17986 None:intergenic 50.0%
GGAGAAGTCTTACGCGATTC+TGG + tig0032629:18002-18021 Msa1449520:CDS 50.0%
TCCTCGGAATCGGATGGTAA+TGG + tig0032629:18027-18046 Msa1449520:CDS 50.0%
TCCATTACCATCCGATTCCG+AGG - tig0032629:18031-18050 None:intergenic 50.0%
! AGAAGAAGCGGAAGCGTGAT+AGG + tig0032629:18076-18095 Msa1449520:CDS 50.0%
GGAAATCGCGTGTTCAAGCT+TGG + tig0032629:18127-18146 Msa1449520:CDS 50.0%
CTCTGACTTCAATTGGGGGA+TGG + tig0032629:18699-18718 Msa1449520:intron 50.0%
TCCCCATTGAACTTCTGCCT+AGG - tig0032629:19282-19301 None:intergenic 50.0%
CAATGGGGATTGCGGATTTG+GGG + tig0032629:19293-19312 Msa1449520:intron 50.0%
GGGATTATACGGTTTGTGCC+GGG - tig0032629:19634-19653 None:intergenic 50.0%
TGCTCTGTGAGTAGCAAAGG+AGG - tig0032629:20966-20985 None:intergenic 50.0%
CTCTGCTCTGTGAGTAGCAA+AGG - tig0032629:20969-20988 None:intergenic 50.0%
GTGCTAGAGTCGGAGAAGAA+GGG + tig0032629:21027-21046 Msa1449520:CDS 50.0%
TGCTAGAGTCGGAGAAGAAG+GGG + tig0032629:21028-21047 Msa1449520:CDS 50.0%
GTCCACATGGTTGGAGAAAG+AGG + tig0032629:21061-21080 Msa1449520:CDS 50.0%
CTCCTCTTTCTCCAACCATG+TGG - tig0032629:21066-21085 None:intergenic 50.0%
CACATGGTTGGAGAAAGAGG+AGG + tig0032629:21064-21083 Msa1449520:CDS 50.0%
TAGGCAACGAGTCGTCAAAG+AGG + tig0032629:21091-21110 Msa1449520:CDS 50.0%
! GTCGAGCCTCTTTTGTGTTC+AGG - tig0032629:21679-21698 None:intergenic 50.0%
! GTGGCTCTGTCCTTCTTTGT+TGG + tig0032629:21901-21920 Msa1449520:intron 50.0%
GACTTTGCCAAAGCTCGACT+AGG - tig0032629:22747-22766 None:intergenic 50.0%
! CAGGTGCTATGCTAAGCTAC+GGG + tig0032629:23125-23144 Msa1449520:intron 50.0%
! GGAAGCCATCTTGTTGCTTG+AGG + tig0032629:23457-23476 Msa1449520:intron 50.0%
GCACGAAGAGAGGCTGATTA+TGG + tig0032629:23639-23658 Msa1449520:CDS 50.0%
CAACTGCTTAGAGCACGTCA+AGG + tig0032629:24086-24105 Msa1449520:CDS 50.0%
!! CAGAGGCATCAGAAGCAATC+AGG + tig0032629:25313-25332 Msa1449520:CDS 50.0%
GACTGAAGGGATATAGCTGG+AGG - tig0032629:25372-25391 None:intergenic 50.0%
CTGGACTGAAGGGATATAGC+TGG - tig0032629:25375-25394 None:intergenic 50.0%
GTACTGTGGCGTTGCTACAT+TGG + tig0032629:26285-26304 Msa1449520:CDS 50.0%
GTACCAGGTCAAAACGGCTA+TGG + tig0032629:26529-26548 Msa1449520:intron 50.0%
!! CAACCATAGCCGTTTTGACC+TGG - tig0032629:26535-26554 None:intergenic 50.0%
CAGGTCAAAACGGCTATGGT+TGG + tig0032629:26533-26552 Msa1449520:intron 50.0%
ATCTGATAGGAGCAGAGTGG+TGG + tig0032629:27149-27168 Msa1449520:three_prime_UTR 50.0%
TCTGATAGGAGCAGAGTGGT+GGG + tig0032629:27150-27169 Msa1449520:three_prime_UTR 50.0%
GTCTAGGTTAGCGCACAGAT+TGG - tig0032629:27261-27280 None:intergenic 50.0%
CCAAAAACCACCTCATCCGG+CGG + tig0032629:17744-17763 Msa1449520:CDS 55.0%
TCATCCGGCGGAAGAAACGA+CGG + tig0032629:17756-17775 Msa1449520:CDS 55.0%
GGGAAGACAGGGAAGAGTGA+AGG - tig0032629:17805-17824 None:intergenic 55.0%
CTGGAATCCTCGGAATCGGA+TGG + tig0032629:18021-18040 Msa1449520:CDS 55.0%
!! TCAAGCTTGGGCTGATTCGG+AGG + tig0032629:18140-18159 Msa1449520:CDS 55.0%
! GTAACCCGCATGGGTTGACT+TGG + tig0032629:18572-18591 Msa1449520:intron 55.0%
ACCACCAAGTCAACCCATGC+GGG - tig0032629:18579-18598 None:intergenic 55.0%
CACCACCAAGTCAACCCATG+CGG - tig0032629:18580-18599 None:intergenic 55.0%
ACTTCAATTGGGGGATGGGC+TGG + tig0032629:18704-18723 Msa1449520:intron 55.0%
TGAAGTCTGCTGGGCGATAC+TGG + tig0032629:19754-19773 Msa1449520:CDS 55.0%
GCAGGAATGCAACGGCAGAA+AGG + tig0032629:20065-20084 Msa1449520:CDS 55.0%
CTTCAGGCAGCAAGCACTCT+AGG + tig0032629:20366-20385 Msa1449520:CDS 55.0%
TGCAGATTTGAGTGGCAGGC+TGG + tig0032629:20882-20901 Msa1449520:CDS 55.0%
GGTGCTAGAGTCGGAGAAGA+AGG + tig0032629:21026-21045 Msa1449520:CDS 55.0%
! TCTCGGTTGGTCCACATGGT+TGG + tig0032629:21052-21071 Msa1449520:CDS 55.0%
! AATGAAGGCGGAGGTTGGTC+TGG + tig0032629:21128-21147 Msa1449520:CDS 55.0%
AGAGTCTGATGTGCTACCGC+TGG + tig0032629:21804-21823 Msa1449520:intron 55.0%
GGTTACGCCTAGTCGAGCTT+TGG + tig0032629:22737-22756 Msa1449520:CDS 55.0%
ACGGATGGAGCTCCCCTATT+TGG + tig0032629:24533-24552 Msa1449520:intron 55.0%
CGGATGGAGCTCCCCTATTT+GGG + tig0032629:24534-24553 Msa1449520:intron 55.0%
GGGTGTGTGTGTGTGTGTGT+GGG + tig0032629:24819-24838 Msa1449520:intron 55.0%
GGTGTGTGTGTGTGTGTGTG+GGG + tig0032629:24820-24839 Msa1449520:intron 55.0%
GTGTGTGTGTGTGTGTGTGG+GGG + tig0032629:24821-24840 Msa1449520:intron 55.0%
TGTGTGTGTGTGTGTGTGGG+GGG + tig0032629:24822-24841 Msa1449520:intron 55.0%
TAGCTGGAGGCCCTGAGAAA+CGG - tig0032629:25359-25378 None:intergenic 55.0%
GGCTCAATCCACAGAATCCG+TGG + tig0032629:26216-26235 Msa1449520:CDS 55.0%
! CCGCCGGATGAGGTGGTTTT+TGG - tig0032629:17747-17766 None:intergenic 60.0%
GTTTCTTCCGCCGGATGAGG+TGG - tig0032629:17754-17773 None:intergenic 60.0%
GTCGTTTCTTCCGCCGGATG+AGG - tig0032629:17757-17776 None:intergenic 60.0%
! GGTTTTGCTTCGTCGGACGG+TGG - tig0032629:17784-17803 None:intergenic 60.0%
!! ACCCGCATGGGTTGACTTGG+TGG + tig0032629:18575-18594 Msa1449520:intron 60.0%
TGGGGATTGCGGATTTGGGG+AGG + tig0032629:19296-19315 Msa1449520:intron 60.0%
GGGGATTGCGGATTTGGGGA+GGG + tig0032629:19297-19316 Msa1449520:intron 60.0%
TCTGCTGGGCGATACTGGTC+CGG + tig0032629:19759-19778 Msa1449520:CDS 60.0%
AGGCAGCAAGCACTCTAGGC+AGG + tig0032629:20370-20389 Msa1449520:CDS 60.0%
GTCGGAGAAGAAGGGGCTCT+CGG + tig0032629:21035-21054 Msa1449520:CDS 60.0%
GAGAAGAAGGGGCTCTCGGT+TGG + tig0032629:21039-21058 Msa1449520:CDS 60.0%
!! AAGGCGGAGGTTGGTCTGGT+TGG + tig0032629:21132-21151 Msa1449520:CDS 60.0%
CTCGACTAGGCGTAACCCCA+CGG - tig0032629:22734-22753 None:intergenic 60.0%
GGGGTGTGTGTGTGTGTGTG+TGG + tig0032629:24818-24837 Msa1449520:intron 60.0%
GTGTGTGTGTGTGTGTGGGG+GGG + tig0032629:24823-24842 Msa1449520:intron 60.0%
TGTGTGTGTGTGTGTGGGGG+GGG + tig0032629:24824-24843 Msa1449520:intron 60.0%
GTGCTATCCATGCTTGCCCC+TGG + tig0032629:26361-26380 Msa1449520:CDS 60.0%
ATCCATGCTTGCCCCTGGTG+AGG + tig0032629:26366-26385 Msa1449520:intron 60.0%
CCGTAACCCAGCTTCCGGAT+GGG - tig0032629:27236-27255 None:intergenic 60.0%
CCCATCCGGAAGCTGGGTTA+CGG + tig0032629:27233-27252 Msa1449520:three_prime_UTR 60.0%
ACCGTAACCCAGCTTCCGGA+TGG - tig0032629:27237-27256 None:intergenic 60.0%
TGGCACCGTAACCCAGCTTC+CGG - tig0032629:27241-27260 None:intergenic 60.0%
GCGGCGATTGCACGGTTTCG+CGG - tig0032629:17942-17961 None:intergenic 65.0%
!! GTCTGGTGGCGGCGATTGCA+CGG - tig0032629:17950-17969 None:intergenic 65.0%
! GGGCTCTCGGTTGGTCCACA+TGG + tig0032629:21048-21067 Msa1449520:CDS 65.0%
TGTGGAAGGGCTTCCTCCCG+AGG + tig0032629:23707-23726 Msa1449520:CDS 65.0%
GTGTGTGTGTGTGTGGGGGG+GGG + tig0032629:24825-24844 Msa1449520:intron 65.0%
TGTGTGTGTGTGTGGGGGGG+GGG + tig0032629:24826-24845 Msa1449520:intron 65.0%
GTCCTCACCAGGGGCAAGCA+TGG - tig0032629:26371-26390 None:intergenic 65.0%
TGTGTCGCCCATCCGGAAGC+TGG + tig0032629:27226-27245 Msa1449520:three_prime_UTR 65.0%
GTGTCGCCCATCCGGAAGCT+GGG + tig0032629:27227-27246 Msa1449520:three_prime_UTR 65.0%
GGCGCCGTCGTTTCTTCCGC+CGG - tig0032629:17763-17782 None:intergenic 70.0%
GTGTGTGTGTGTGGGGGGGG+GGG + tig0032629:24827-24846 Msa1449520:intron 70.0%
TGTGTGTGTGTGGGGGGGGG+GGG + tig0032629:24828-24847 Msa1449520:intron 70.0%
GTGTGTGTGTGGGGGGGGGG+GGG + tig0032629:24829-24848 Msa1449520:intron 75.0%
TGTGTGTGTGGGGGGGGGGG+GGG + tig0032629:24830-24849 Msa1449520:intron 75.0%
! GTGTGTGTGGGGGGGGGGGG+GGG + tig0032629:24831-24850 Msa1449520:intron 80.0%
Chromosome Type Strat End Strand Name
tig0032629 gene 17739 27468 17739 ID=Msa1449520;Name=Msa1449520
tig0032629 mRNA 17739 27468 17739 ID=Msa1449520-mRNA-1;Parent=Msa1449520;Name=Msa1449520-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|0.90|1|0.9|0.81|11|406|1157
tig0032629 exon 17739 18235 17739 ID=Msa1449520-mRNA-1:exon:16977;Parent=Msa1449520-mRNA-1
tig0032629 exon 19620 20391 19620 ID=Msa1449520-mRNA-1:exon:16978;Parent=Msa1449520-mRNA-1
tig0032629 exon 20801 21422 20801 ID=Msa1449520-mRNA-1:exon:16979;Parent=Msa1449520-mRNA-1
tig0032629 exon 21579 21750 21579 ID=Msa1449520-mRNA-1:exon:16980;Parent=Msa1449520-mRNA-1
tig0032629 exon 22437 22788 22437 ID=Msa1449520-mRNA-1:exon:16981;Parent=Msa1449520-mRNA-1
tig0032629 exon 23615 23728 23615 ID=Msa1449520-mRNA-1:exon:16982;Parent=Msa1449520-mRNA-1
tig0032629 exon 23921 24272 23921 ID=Msa1449520-mRNA-1:exon:16983;Parent=Msa1449520-mRNA-1
tig0032629 exon 25254 25479 25254 ID=Msa1449520-mRNA-1:exon:16984;Parent=Msa1449520-mRNA-1
tig0032629 exon 26161 26382 26161 ID=Msa1449520-mRNA-1:exon:16985;Parent=Msa1449520-mRNA-1
tig0032629 exon 26536 26741 26536 ID=Msa1449520-mRNA-1:exon:16986;Parent=Msa1449520-mRNA-1
tig0032629 exon 27124 27468 27124 ID=Msa1449520-mRNA-1:exon:16987;Parent=Msa1449520-mRNA-1
tig0032629 CDS 17739 18235 17739 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 19620 20391 19620 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 20801 21422 20801 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 21579 21750 21579 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 22437 22788 22437 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 23615 23728 23615 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 23921 24272 23921 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 25254 25479 25254 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 26161 26382 26161 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 CDS 26536 26680 26536 ID=Msa1449520-mRNA-1:cds;Parent=Msa1449520-mRNA-1
tig0032629 three_prime_UTR 26681 26741 26681 ID=Msa1449520-mRNA-1:three_prime_utr;Parent=Msa1449520-mRNA-1
tig0032629 three_prime_UTR 27124 27468 27124 ID=Msa1449520-mRNA-1:three_prime_utr;Parent=Msa1449520-mRNA-1
Gene Sequence

>Msa1449520

ATGGACCAAAAACCACCTCATCCGGCGGAAGAAACGACGGCGCCACCGTCCGACGAAGCAAAACCTTCACTCTTCCCTGTCTTCCCCGTAACAAAATCTTCTCTTCAAATCACAACTTCTCCGCTTCCTCAATGGCTCAGTAACTCTAGCTTCACAACCGACATCGCCGTCATCAATGACGATGTCGCTTCATTACTCAACCGCGAAACCGTGCAATCGCCGCCACCAGACGACGATGAAAACAGCGATGAAAATCGACCTAAGGAGAAGTCTTACGCGATTCTGGAATCCTCGGAATCGGATGGTAATGGAATGGAGAGAGAGAAGAAGAGGAAGAAGAAGAAGCGGAAGCGTGATAGGTCTGATGAGAGAAGTGGATTTGGTTCGAGGAAATCGCGTGTTCAAGCTTGGGCTGATTCGGAGGCTAATACTGTTAAAGATTATTACTTTGATTCTCATGGTGATCGTGATAATCTTGCATTTGGCTGTATCTATAGAATGGATATTGCCCGGCACAAACCGTATAATCCCTTGAATATGTCTGGGCGACATGTTAAAGGTTTGTATTGGTGGAATCAAAGTGGTTCACTTGGGGAAAGAGATGTCGATATTGATGCTTTGGATGATAAAATGAAGTCTGCTGGGCGATACTGGTCCGGAAAGTATATGGCTTTAGAACGACATAAAAGCTTCAAGCGCCTACGTCTTGTTGCTCCAAAATCGTCTCCTCATACAACACAAGATGAGTTTATACCTTTATCAGATGTTGGTACATCTCAAGGAGCTGTTGACAGTGAATCCGACTCTAAAATTTCATCATCACTTGAAGAATCTTGGGAAGATGAAATGTTAAATAAAACCAGGGAGTTCAACAAACTGACAAGGGAGAACCCGCATGATGAAATAGTTTGGTTACATTTTGCCGAGTTCCAAGATAAGGTTGCAGGAATGCAACGGCAGAAAGGTGCTCGCTTGCAAATACTTGAAAAGAAAATTAGCATTCTGGAGAAGGCAGTTGAGCTTAACCCAGAGAATGAAAATCTATTACTTTGCCTTTTAAAAGCTTATCAAACAAGAGATAGCTCAGATGTGTTAATTGGGAGATGGGAGAAAATACTCTTGCAACATTCTGGAAGTTACAAGTTATGGAGTGAATTCTTGCATGTTGTTCAGAGGAATTTCTCCAAGTTCAAGGTTTCCATGGTTAGGAAGATGTATGCTTATGCTATTGAAGCTTTGTCTGCTTCAGGCAGCAAGCACTCTAGGCAGGCTCTTCAAGCTGATGATTCTTCACCGGATCCTGCAATTGTTCAGCAAGAACTTCGTCTTGTAGATATATTTCTCAGTCTTTGCAGATTTGAGTGGCAGGCTGGTTATAGAGAAGTTGCCACTGCTTTATTTCAGGCTGAAATTGAGTTTAGTTTATTTTGTCCTCCTTTGCTACTCACAGAGCAGAGTAAGCAACGACTGTTTGAGCATTTTTGGAATAGTCATGGTGCTAGAGTCGGAGAAGAAGGGGCTCTCGGTTGGTCCACATGGTTGGAGAAAGAGGAGGAAACTAGGCAACGAGTCGTCAAAGAGGAGCTCTCACATGAAAATGAAGGCGGAGGTTGGTCTGGTTGGTCAGAACCTTTGTCTAAAGATATGGAGGGTACGGCCAATTTTGAAAATGAAACTGACATTGATTTGGTTATGGAGGATAATCAAGATGAGGATGAATATAAAGATGTTGAGCCTGAAGATGATACTGAGAATTTGCTAAAGCTGCTGGGAATTGATATTAATGCTGGGGATGGGGGAGAAGTTAATGACACTTTGACCTGGATCAAATGGTCAGAAGAAGAGTCTTCTAGAGATTGTGATCAGTGGATGCCTATTCGAAGGAAGTTAGATACAACCTCTTCTACTAGTGAAGCACTCGAAACAGAAGAGGATGAGAAACTCTCGAGAATCATATTGTATGAAGATGTAAGCGAATACCTTTTCACCCTGAACACAAAAGAGGCTCGACTATATTTGGTGTCCCAATTCATTGACTTCTATGGTGGGAAGACGTCTCAATTGTTTTCAACAAACAGTCCTACTTGGACAGAGAACACACTTAGCTTGGAGGATCTGCCAGATTCTATGTTAGAGAAGTTGAAATGCATCCATAACGTTTTGACAAAAGCACAAAGCATTCCTACTAGTTTCACTTTAGATTTTCTATTAGGAAGTTCCATGAGGAATGCTGATATGATGAAATTCGTACGGAATGCAGTCTTACTTTGCTTAACTGTTTTTCCACGTAATCACGTTTTGGAAGAAGCAGTTCTTATTTGTGAAGAGCTTTTTGTTACTAAAATGAATTCTTCTAACCGTGGGGTTACGCCTAGTCGAGCTTTGGCAAAGTCTCTCTTAAAAAGTGATAGACAGGATGTTTTGTTGTGTGGTGTATATGCACGAAGAGAGGCTGATTATGGCAATATTGATCTTGCAAGAAAGGTGTTTGATATGGCATTGTTATCTGTGGAAGGGCTTCCTCCCGAGGAGATTCAGTCCAATGCACCTCTTCTATATTTATGGTATGCTGAAGTGGAGCTTGCAAATAACACTAACGGTGGTCGTGAATCTTCATATCGTGCGATACATATATTGTCTTGCTTAGGAAATGGTACAAAATACACCCCATTTAAAAGTCAAGCATCAAGTTTGCAACTGCTTAGAGCACGTCAAGGGTTTAAAGAAAAACTGAGAACAGTATTATCATCTTGGTTTCGTGGTATAATAAATGACCAATCTGTCGCTCTGGTATGTTCTGCTTCATTGTTTGAGGAGCTAACTTCTGGATGTGATGCGGGCATTGAAGTTTTGGATCAAGCTTTTACTATGGTGCTTCCAGAAAGGAGAAGCCATAGCTATCAACTTGAATTTTTGTTTAACTATTACATAAGGATGCTTCAGAGGCATCAGAAGCAATCAGGTCTGATGAAAGTTTGGGAATCCGTTTCTCAGGGCCTCCAGCTATATCCCTTCAGTCCAGAACTTTTAAAAGGTGTAGTGGAAGTTGGCCACTTCCACACAACGTCTAATAAATTGCGGCGGATCCTAGATGAACGCTGTTACAAAAAACCATCTGTAGTTGTCTGGCTTTTTGCATTGTCATACGAGATGTCTAGAGGTGGCTCAATCCACAGAATCCGTGGATTATTTGAAAGGGCAGTGAGTAATCATATGCTTTGCAGCTCAGTTGTACTGTGGCGTTGCTACATTGGGTATGAATTGAACATTGCACATGATCCTTCTGCAGCTCGACGTATTTTCTTTCGTGCTATCCATGCTTGCCCCTGGTCAAAACGGCTATGGTTGGATGGATTTCTCAAACTGAACTCTGTTCTTACTGGAAAAGAGCTTTCTGATCTACAAGAAGTAATGCGTGATAAAGAACTAAATCTAAGAACTGACATTTATGAGATCCTTTTGCAAGAGTCATGA
Protein sequence

>Msa1449520

MDQKPPHPAEETTAPPSDEAKPSLFPVFPVTKSSLQITTSPLPQWLSNSSFTTDIAVINDDVASLLNRETVQSPPPDDDENSDENRPKEKSYAILESSESDGNGMEREKKRKKKKRKRDRSDERSGFGSRKSRVQAWADSEANTVKDYYFDSHGDRDNLAFGCIYRMDIARHKPYNPLNMSGRHVKGLYWWNQSGSLGERDVDIDALDDKMKSAGRYWSGKYMALERHKSFKRLRLVAPKSSPHTTQDEFIPLSDVGTSQGAVDSESDSKISSSLEESWEDEMLNKTREFNKLTRENPHDEIVWLHFAEFQDKVAGMQRQKGARLQILEKKISILEKAVELNPENENLLLCLLKAYQTRDSSDVLIGRWEKILLQHSGSYKLWSEFLHVVQRNFSKFKVSMVRKMYAYAIEALSASGSKHSRQALQADDSSPDPAIVQQELRLVDIFLSLCRFEWQAGYREVATALFQAEIEFSLFCPPLLLTEQSKQRLFEHFWNSHGARVGEEGALGWSTWLEKEEETRQRVVKEELSHENEGGGWSGWSEPLSKDMEGTANFENETDIDLVMEDNQDEDEYKDVEPEDDTENLLKLLGIDINAGDGGEVNDTLTWIKWSEEESSRDCDQWMPIRRKLDTTSSTSEALETEEDEKLSRIILYEDVSEYLFTLNTKEARLYLVSQFIDFYGGKTSQLFSTNSPTWTENTLSLEDLPDSMLEKLKCIHNVLTKAQSIPTSFTLDFLLGSSMRNADMMKFVRNAVLLCLTVFPRNHVLEEAVLICEELFVTKMNSSNRGVTPSRALAKSLLKSDRQDVLLCGVYARREADYGNIDLARKVFDMALLSVEGLPPEEIQSNAPLLYLWYAEVELANNTNGGRESSYRAIHILSCLGNGTKYTPFKSQASSLQLLRARQGFKEKLRTVLSSWFRGIINDQSVALVCSASLFEELTSGCDAGIEVLDQAFTMVLPERRSHSYQLEFLFNYYIRMLQRHQKQSGLMKVWESVSQGLQLYPFSPELLKGVVEVGHFHTTSNKLRRILDERCYKKPSVVVWLFALSYEMSRGGSIHRIRGLFERAVSNHMLCSSVVLWRCYIGYELNIAHDPSAARRIFFRAIHACPWSKRLWLDGFLKLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQES*