Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424520 | sp|Q6SZ87|NAT11_ARATH | 63.971 | 680 | 227 | 7 | 8 | 675 | 36 | 709 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424520 | G7JWD8 | 94.026 | 703 | 16 | 2 | 1 | 679 | 1 | 701 | 0.0 | 1333 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0049320 | Msa1424520 | 0.852247 | 5.232859e-61 | -8.615850e-47 |
| Msa0841430 | Msa1424520 | 0.871651 | 5.807712e-67 | -8.615850e-47 |
| Msa1160910 | Msa1424520 | 0.803793 | 2.942723e-49 | -8.615850e-47 |
| Msa1172350 | Msa1424520 | 0.933439 | 1.872955e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424520 | MtrunA17_Chr5g0412181 | 94.026 | 703 | 16 | 2 | 1 | 679 | 1 | 701 | 0.0 | 1333 |
| Msa1424520 | MtrunA17_Chr8g0367361 | 68.980 | 735 | 159 | 11 | 8 | 679 | 44 | 772 | 0.0 | 986 |
| Msa1424520 | MtrunA17_Chr4g0027121 | 50.292 | 686 | 309 | 7 | 14 | 679 | 17 | 690 | 0.0 | 645 |
| Msa1424520 | MtrunA17_Chr2g0320981 | 49.403 | 670 | 320 | 5 | 19 | 679 | 23 | 682 | 0.0 | 639 |
| Msa1424520 | MtrunA17_Chr2g0332871 | 44.265 | 680 | 317 | 9 | 25 | 679 | 5 | 647 | 0.0 | 550 |
| Msa1424520 | MtrunA17_Chr8g0379171 | 37.187 | 519 | 290 | 5 | 157 | 671 | 31 | 517 | 2.27e-111 | 346 |
| Msa1424520 | MtrunA17_Chr3g0119521 | 37.911 | 517 | 284 | 6 | 160 | 671 | 29 | 513 | 2.33e-109 | 340 |
| Msa1424520 | MtrunA17_Chr4g0059331 | 35.521 | 518 | 296 | 4 | 160 | 671 | 40 | 525 | 1.78e-107 | 336 |
| Msa1424520 | MtrunA17_Chr3g0117941 | 35.907 | 518 | 294 | 4 | 160 | 671 | 40 | 525 | 2.15e-107 | 335 |
| Msa1424520 | MtrunA17_Chr8g0364611 | 36.293 | 518 | 292 | 5 | 160 | 671 | 41 | 526 | 1.77e-106 | 333 |
| Msa1424520 | MtrunA17_Chr2g0284061 | 34.489 | 548 | 320 | 6 | 130 | 671 | 3 | 517 | 2.45e-106 | 333 |
| Msa1424520 | MtrunA17_Chr5g0414131 | 34.682 | 519 | 300 | 4 | 160 | 671 | 45 | 531 | 2.00e-101 | 320 |
| Msa1424520 | MtrunA17_Chr3g0134911 | 33.645 | 535 | 305 | 11 | 163 | 671 | 68 | 578 | 7.82e-91 | 294 |
| Msa1424520 | MtrunA17_Chr1g0207021 | 32.819 | 518 | 308 | 6 | 160 | 671 | 37 | 520 | 1.87e-90 | 291 |
| Msa1424520 | MtrunA17_Chr1g0154001 | 33.268 | 514 | 303 | 5 | 164 | 671 | 61 | 540 | 1.28e-88 | 287 |
| Msa1424520 | MtrunA17_Chr5g0405471 | 33.396 | 536 | 289 | 9 | 163 | 671 | 61 | 555 | 2.29e-83 | 273 |
| Msa1424520 | MtrunA17_Chr5g0412191 | 61.644 | 73 | 21 | 1 | 12 | 77 | 27 | 99 | 1.42e-22 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424520 | AT4G38050.1 | 63.971 | 680 | 227 | 7 | 8 | 675 | 36 | 709 | 0.0 | 825 |
| Msa1424520 | AT2G27810.1 | 51.159 | 690 | 290 | 10 | 25 | 679 | 28 | 705 | 0.0 | 622 |
| Msa1424520 | AT2G27810.4 | 49.580 | 714 | 289 | 11 | 25 | 679 | 28 | 729 | 0.0 | 612 |
| Msa1424520 | AT2G27810.2 | 52.091 | 574 | 230 | 9 | 25 | 565 | 28 | 589 | 6.21e-173 | 507 |
| Msa1424520 | AT2G27810.3 | 51.423 | 527 | 211 | 9 | 25 | 518 | 28 | 542 | 1.52e-150 | 447 |
| Msa1424520 | AT1G60030.1 | 38.803 | 518 | 279 | 4 | 160 | 671 | 46 | 531 | 4.44e-119 | 367 |
| Msa1424520 | AT2G05760.1 | 38.791 | 513 | 277 | 5 | 164 | 671 | 33 | 513 | 1.05e-109 | 342 |
| Msa1424520 | AT2G34190.1 | 36.240 | 516 | 293 | 5 | 160 | 671 | 34 | 517 | 5.55e-109 | 340 |
| Msa1424520 | AT5G62890.1 | 36.293 | 518 | 292 | 4 | 160 | 671 | 40 | 525 | 2.45e-108 | 338 |
| Msa1424520 | AT5G62890.2 | 36.293 | 518 | 292 | 4 | 160 | 671 | 40 | 525 | 2.45e-108 | 338 |
| Msa1424520 | AT5G62890.3 | 36.293 | 518 | 292 | 4 | 160 | 671 | 40 | 525 | 2.45e-108 | 338 |
| Msa1424520 | AT5G49990.2 | 36.311 | 515 | 290 | 6 | 163 | 671 | 39 | 521 | 1.76e-105 | 331 |
| Msa1424520 | AT5G49990.3 | 36.311 | 515 | 290 | 6 | 163 | 671 | 39 | 521 | 1.76e-105 | 331 |
| Msa1424520 | AT5G49990.1 | 36.311 | 515 | 290 | 6 | 163 | 671 | 39 | 521 | 1.76e-105 | 331 |
| Msa1424520 | AT5G49990.4 | 36.311 | 515 | 290 | 6 | 163 | 671 | 39 | 521 | 1.76e-105 | 331 |
| Msa1424520 | AT1G10540.1 | 35.305 | 524 | 294 | 8 | 160 | 672 | 44 | 533 | 8.71e-103 | 324 |
| Msa1424520 | AT1G49960.1 | 36.873 | 518 | 289 | 5 | 160 | 671 | 34 | 519 | 8.74e-100 | 316 |
| Msa1424520 | AT5G62890.4 | 37.389 | 452 | 249 | 3 | 160 | 609 | 40 | 459 | 9.80e-98 | 309 |
| Msa1424520 | AT2G26510.1 | 35.146 | 515 | 293 | 6 | 164 | 671 | 62 | 542 | 1.61e-87 | 285 |
| Msa1424520 | AT1G65550.1 | 32.567 | 522 | 305 | 7 | 163 | 671 | 47 | 534 | 3.62e-85 | 278 |
| Msa1424520 | AT1G10540.2 | 35.890 | 365 | 207 | 5 | 160 | 517 | 44 | 388 | 1.99e-72 | 240 |
| Msa1424520 | AT2G26510.3 | 37.604 | 359 | 200 | 4 | 163 | 517 | 61 | 399 | 6.96e-63 | 215 |
| Msa1424520 | AT2G26510.2 | 37.572 | 346 | 192 | 4 | 163 | 504 | 61 | 386 | 2.75e-59 | 206 |
| Msa1424520 | AT5G25420.1 | 29.691 | 421 | 208 | 6 | 163 | 581 | 59 | 393 | 3.00e-53 | 189 |
Find 193 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACATGACTTACTTGTTTA+AGG | 0.077021 | tig0025721:+65195 | None:intergenic |
| TAGTATATTGGCTGGTCTTT+GGG | 0.186238 | tig0025721:-65755 | Msa1424520:CDS |
| TCTACAATGTTGTTTCTTTC+CGG | 0.199188 | tig0025721:-67594 | Msa1424520:CDS |
| AGCTTTGAATTATTCATTAT+TGG | 0.213182 | tig0025721:-64716 | Msa1424520:three_prime_UTR |
| TATTACTAGCAACATTAAAT+TGG | 0.243999 | tig0025721:-64743 | Msa1424520:three_prime_UTR |
| GCAGTATCTCTTATCTATTA+TGG | 0.244533 | tig0025721:-67808 | Msa1424520:intron |
| GTAGTATATTGGCTGGTCTT+TGG | 0.248801 | tig0025721:-65756 | Msa1424520:CDS |
| GAAGTCCTGAAGTGGAAAAT+AGG | 0.249412 | tig0025721:+66017 | None:intergenic |
| TGCTTCCATTCCACAGGCCT+TGG | 0.253689 | tig0025721:-65447 | Msa1424520:CDS |
| TTGGCTGGTCTTTGGGGTTC+AGG | 0.262793 | tig0025721:-65748 | Msa1424520:CDS |
| GGGTTTGTTTCTGATTATTC+AGG | 0.269736 | tig0025721:-69739 | Msa1424520:CDS |
| TCTCCAAATTCAACTCCTTC+TGG | 0.279848 | tig0025721:+69369 | None:intergenic |
| CCTCGTTCTTGTTTACTTCC+CGG | 0.284283 | tig0025721:+64953 | None:intergenic |
| CGTTCATGGGCTAAGAAAAC+TGG | 0.287394 | tig0025721:-69760 | Msa1424520:CDS |
| TTCAATATTCCAATGTATCT+TGG | 0.297916 | tig0025721:-67203 | Msa1424520:CDS |
| GGAACAAAAGGTGCAACTTT+TGG | 0.299363 | tig0025721:+69811 | None:intergenic |
| CACTTCTGACATTAACAAAA+AGG | 0.313427 | tig0025721:-64812 | Msa1424520:three_prime_UTR |
| ACCGTTGGCGCAACCACAAC+AGG | 0.317314 | tig0025721:+66693 | None:intergenic |
| TGACACTATGACCATGATTA+TGG | 0.319148 | tig0025721:+65995 | None:intergenic |
| CGCATAAGGAACAAGATAAC+TGG | 0.321940 | tig0025721:+65247 | None:intergenic |
| TTGCTGTTGGTTGAAGTGAT+TGG | 0.324960 | tig0025721:-64843 | Msa1424520:exon |
| CAATGTATCTTGGGATTTAG+TGG | 0.331523 | tig0025721:-67193 | Msa1424520:CDS |
| TTGATCCTCTTCTCATTTGT+AGG | 0.332106 | tig0025721:-65634 | Msa1424520:intron |
| GTGGGCTCTTACCGTGGCAT+TGG | 0.337955 | tig0025721:-65402 | Msa1424520:CDS |
| ATTGCAGATCATGAAGAAAA+AGG | 0.345314 | tig0025721:-64788 | Msa1424520:three_prime_UTR |
| GTTGGATCTATCTCTATCTT+AGG | 0.353421 | tig0025721:+69646 | None:intergenic |
| TGCTGTTGGTTGAAGTGATT+GGG | 0.353798 | tig0025721:-64842 | Msa1424520:exon |
| ACTATACTGCACTCTTACTT+TGG | 0.354542 | tig0025721:-67564 | Msa1424520:CDS |
| GGTCTTTGGGGTTCAGGTAC+CGG | 0.358878 | tig0025721:-65742 | Msa1424520:CDS |
| GGAGGGTTTCTGTAGTATAT+TGG | 0.361128 | tig0025721:-65767 | Msa1424520:CDS |
| ATGACTGGTACCATGACTAA+TGG | 0.362103 | tig0025721:+67742 | None:intergenic |
| ATCAGCCCTGCAATGCTTCA+TGG | 0.374512 | tig0025721:+66103 | None:intergenic |
| CATATACCATGAAGCATTGC+AGG | 0.376910 | tig0025721:-66109 | Msa1424520:CDS |
| GCCCATGAACGTAATTCTCT+TGG | 0.376998 | tig0025721:+69772 | None:intergenic |
| TCAATATTCCAATGTATCTT+GGG | 0.377573 | tig0025721:-67202 | Msa1424520:CDS |
| CAGTGTAACCACCATGTTCA+TGG | 0.386977 | tig0025721:+65006 | None:intergenic |
| TCAAGTGGGCCATTCCATTC+AGG | 0.393498 | tig0025721:-65218 | Msa1424520:CDS |
| CTTCAAGGTGCTATAATTGT+TGG | 0.396001 | tig0025721:-67226 | Msa1424520:CDS |
| AGGCTGGTATTGTTGAAAAT+AGG | 0.398406 | tig0025721:+65289 | None:intergenic |
| TGGGCTCTTACCGTGGCATT+GGG | 0.399078 | tig0025721:-65401 | Msa1424520:CDS |
| GAGAGGAAAGTTGGTTTAAG+AGG | 0.401648 | tig0025721:-69520 | Msa1424520:CDS |
| ATTCCTCGGCTCACAACTCC+TGG | 0.404762 | tig0025721:+65796 | None:intergenic |
| ACAGTCACAAGCTGGTGTTT+TGG | 0.405092 | tig0025721:-69596 | Msa1424520:CDS |
| TTACTTGTTTAAGGCCTGAA+TGG | 0.405824 | tig0025721:+65204 | None:intergenic |
| ACTGTTGGTGGCATTTCTAC+TGG | 0.415195 | tig0025721:-64987 | Msa1424520:CDS |
| CGTCACTTCAAGTTAATTCA+AGG | 0.416440 | tig0025721:-65828 | Msa1424520:CDS |
| CGTTGAGCGCAACAATAACT+TGG | 0.418430 | tig0025721:-66235 | Msa1424520:CDS |
| TTCTGTCAAAGTCGTTGAAC+CGG | 0.418532 | tig0025721:+65723 | None:intergenic |
| CCCTGTTGTGGTTGCGCCAA+CGG | 0.418704 | tig0025721:-66694 | Msa1424520:CDS |
| ATGTTTGAACTCGGTACATT+GGG | 0.420675 | tig0025721:+66158 | None:intergenic |
| CCACTTGACGCTGCCGCATA+AGG | 0.423290 | tig0025721:+65233 | None:intergenic |
| CACTGTTCCACAAATTGCAT+TGG | 0.423678 | tig0025721:-66607 | Msa1424520:CDS |
| AAACAACATTGTAGAAATTA+CGG | 0.423737 | tig0025721:+67602 | None:intergenic |
| TCACCATTCAAAGGCAAAAC+AGG | 0.425968 | tig0025721:+69547 | None:intergenic |
| ATGGTCAATCAGCTAGCTTC+AGG | 0.426770 | tig0025721:-65361 | Msa1424520:CDS |
| CCCTTGCACTAAAGGAAGTC+GGG | 0.431146 | tig0025721:+67539 | None:intergenic |
| GGTTTAGCGTTCTTCAGTTA+CGG | 0.431955 | tig0025721:-66660 | Msa1424520:CDS |
| TTATAAATGCTCAAGAATAT+CGG | 0.433551 | tig0025721:-67482 | Msa1424520:CDS |
| AAGTCCTGAAGTGGAAAATA+GGG | 0.433703 | tig0025721:+66018 | None:intergenic |
| TGACTGGTACCATGACTAAT+GGG | 0.437934 | tig0025721:+67743 | None:intergenic |
| AATAGAACCAATGCAATTTG+TGG | 0.438702 | tig0025721:+66600 | None:intergenic |
| TCCACAAGCTGGTATTTGCT+TGG | 0.443162 | tig0025721:-66634 | Msa1424520:CDS |
| ACTGGTTGCTTCTGTTGATT+CGG | 0.443347 | tig0025721:-65973 | Msa1424520:intron |
| AACGAGCTCCCTTGCACTAA+AGG | 0.444458 | tig0025721:+67531 | None:intergenic |
| CCCATGAACGTAATTCTCTT+GGG | 0.446265 | tig0025721:+69773 | None:intergenic |
| TCTGATTATTCAGGTGAAGC+AGG | 0.448658 | tig0025721:-69730 | Msa1424520:CDS |
| CTCGTTCTTGTTTACTTCCC+GGG | 0.450845 | tig0025721:+64954 | None:intergenic |
| GTCGGCGTTGCATTGTTCCT+TGG | 0.453402 | tig0025721:-65326 | Msa1424520:CDS |
| TCTCCTTGCTTCCATTCCAC+AGG | 0.455637 | tig0025721:-65453 | Msa1424520:CDS |
| CAGCATAAATTCGAAATAAG+TGG | 0.456937 | tig0025721:+66366 | None:intergenic |
| GCGCCAACGGTTGCTGCTGT+AGG | 0.457783 | tig0025721:-66681 | Msa1424520:CDS |
| CCTCTTCCTCTATGATGAAA+AGG | 0.458047 | tig0025721:+69682 | None:intergenic |
| GGCCTATCGACTTTACAGTA+TGG | 0.462728 | tig0025721:-65380 | Msa1424520:CDS |
| CTTACAGCACTATATATCAT+TGG | 0.465141 | tig0025721:-67785 | Msa1424520:CDS |
| CTCACAACTCCTGGAGTTGG+AGG | 0.475666 | tig0025721:+65805 | None:intergenic |
| GGTGATGGTGAGAGGAAAGT+TGG | 0.476679 | tig0025721:-69529 | Msa1424520:CDS |
| ATTAGTCATGGTACCAGTCA+TGG | 0.477474 | tig0025721:-67740 | Msa1424520:CDS |
| CTTCGAGGAATATCTATCTC+TGG | 0.481735 | tig0025721:-66392 | Msa1424520:CDS |
| TCATCCTTCTCCTCAGTCAC+AGG | 0.482513 | tig0025721:+69439 | None:intergenic |
| TTCAGGAACATGACAATTGT+CGG | 0.483776 | tig0025721:-65344 | Msa1424520:CDS |
| ACATGGTGATGGTGAAGTTA+AGG | 0.485541 | tig0025721:-69404 | Msa1424520:CDS |
| CCTTATGCGGCAGCGTCAAG+TGG | 0.488646 | tig0025721:-65233 | Msa1424520:CDS |
| AGTAGGAGAGTAGTGGAACT+TGG | 0.490518 | tig0025721:-65667 | Msa1424520:CDS |
| GGTTTCTGTAGTATATTGGC+TGG | 0.490990 | tig0025721:-65763 | Msa1424520:CDS |
| AGAGGAAAGTTGGTTTAAGA+GGG | 0.491986 | tig0025721:-69519 | Msa1424520:CDS |
| CGGCTCACAACTCCTGGAGT+TGG | 0.492387 | tig0025721:+65802 | None:intergenic |
| ACCCAAGAGAATTACGTTCA+TGG | 0.493944 | tig0025721:-69774 | Msa1424520:CDS |
| AATGTTTGAACTCGGTACAT+TGG | 0.497178 | tig0025721:+66157 | None:intergenic |
| ATACCCCACTGTAAAGGATA+AGG | 0.497905 | tig0025721:+66041 | None:intergenic |
| CTCGTTTGTGTATTTAGCAC+CGG | 0.498548 | tig0025721:-67514 | Msa1424520:CDS |
| AATCATGGTCATAGTGTCAC+TGG | 0.503235 | tig0025721:-65991 | Msa1424520:CDS |
| CGCTCTTATGTCCATGAACA+TGG | 0.503641 | tig0025721:-65017 | Msa1424520:CDS |
| AGAAATTTAGACACATAATG+AGG | 0.505086 | tig0025721:-67252 | Msa1424520:CDS |
| CTTGTGACTGTGAAGCTGGT+TGG | 0.506979 | tig0025721:+69608 | None:intergenic |
| ATTGGTTCTATTATTCACTC+TGG | 0.507159 | tig0025721:-66589 | Msa1424520:intron |
| TGCTATACTGTGTTTCATGT+GGG | 0.512633 | tig0025721:-65420 | Msa1424520:CDS |
| CCAGCTTGTGACTGTGAAGC+TGG | 0.516672 | tig0025721:+69604 | None:intergenic |
| GTGAATGGTAATGGTGGTAA+TGG | 0.518068 | tig0025721:-69484 | Msa1424520:CDS |
| AATTCAAGGCCTCCAACTCC+AGG | 0.519913 | tig0025721:-65814 | Msa1424520:CDS |
| AAAGTTGGTTTAAGAGGGAA+TGG | 0.522061 | tig0025721:-69514 | Msa1424520:CDS |
| ATGCATTGTCTACTGCTGCA+TGG | 0.523315 | tig0025721:-66073 | Msa1424520:CDS |
| GGTGTTAATGTGAATGGTAA+TGG | 0.523853 | tig0025721:-69493 | Msa1424520:CDS |
| CAGCACTATATATCATTGGC+TGG | 0.524188 | tig0025721:-67781 | Msa1424520:CDS |
| TGGATCTCAACACCCCTAGT+TGG | 0.524426 | tig0025721:+69628 | None:intergenic |
| ACATCTGTTCCACCCATGAC+TGG | 0.524518 | tig0025721:+67727 | None:intergenic |
| CTGCTATACTGTGTTTCATG+TGG | 0.524664 | tig0025721:-65421 | Msa1424520:CDS |
| GCATTTATAATGACTAATGC+CGG | 0.525117 | tig0025721:+67495 | None:intergenic |
| TGCATTGTCTACTGCTGCAT+GGG | 0.526144 | tig0025721:-66072 | Msa1424520:CDS |
| CTTCAGGACTTCCATAATCA+TGG | 0.529196 | tig0025721:-66006 | Msa1424520:CDS |
| AATTCCTTATCCTTTACAGT+GGG | 0.530316 | tig0025721:-66045 | Msa1424520:CDS |
| CTACTGGACAACACTGTCCC+GGG | 0.530706 | tig0025721:-64971 | Msa1424520:CDS |
| AGATAGAGATAGATCCAACT+AGG | 0.536250 | tig0025721:-69642 | Msa1424520:CDS |
| AGTATATTGGCTGGTCTTTG+GGG | 0.537211 | tig0025721:-65754 | Msa1424520:CDS |
| TTGTTGAAAATAGGATGGAA+TGG | 0.537365 | tig0025721:+65298 | None:intergenic |
| TCTACTGGACAACACTGTCC+CGG | 0.540937 | tig0025721:-64972 | Msa1424520:CDS |
| TGTGACTGAGGAGAAGGATG+AGG | 0.542229 | tig0025721:-69437 | Msa1424520:CDS |
| AACCCTCCAATGCAATTCCT+CGG | 0.543888 | tig0025721:+65782 | None:intergenic |
| TCAGGTGAAGCAGGGACTAG+TGG | 0.544152 | tig0025721:-69721 | Msa1424520:CDS |
| AGCCGAGGAATTGCATTGGA+GGG | 0.544530 | tig0025721:-65784 | Msa1424520:CDS |
| CAAGTTATTGTTGCGCTCAA+CGG | 0.544576 | tig0025721:+66236 | None:intergenic |
| TTTCATGTGGGCTCTTACCG+TGG | 0.545169 | tig0025721:-65408 | Msa1424520:CDS |
| CACATAATGAGGGAACTTCA+AGG | 0.546339 | tig0025721:-67241 | Msa1424520:CDS |
| ATAGGGATACCCCACTGTAA+AGG | 0.546733 | tig0025721:+66035 | None:intergenic |
| CCCAAGAGAATTACGTTCAT+GGG | 0.549316 | tig0025721:-69773 | Msa1424520:CDS |
| ACCCGACTTCCTTTAGTGCA+AGG | 0.549323 | tig0025721:-67540 | Msa1424520:CDS |
| CTGATTATTCAGGTGAAGCA+GGG | 0.551463 | tig0025721:-69729 | Msa1424520:CDS |
| AGGTTAATGTTGTTTCCAGA+AGG | 0.552561 | tig0025721:-69384 | Msa1424520:CDS |
| TCCCTTGCACTAAAGGAAGT+CGG | 0.553144 | tig0025721:+67538 | None:intergenic |
| CCCGACTTCCTTTAGTGCAA+GGG | 0.555144 | tig0025721:-67539 | Msa1424520:CDS |
| GTGCAGTATAGTTGTGATGC+CGG | 0.555342 | tig0025721:+67575 | None:intergenic |
| TGTTTAAGGCCTGAATGGAA+TGG | 0.558091 | tig0025721:+65209 | None:intergenic |
| CACTAAATCCCAAGATACAT+TGG | 0.559536 | tig0025721:+67194 | None:intergenic |
| GGGAATGGTGTTAATGTGAA+TGG | 0.562700 | tig0025721:-69499 | Msa1424520:CDS |
| AACTTGCATGGTGTTGCTGT+TGG | 0.564262 | tig0025721:-64856 | Msa1424520:CDS |
| CTCTCACCATCACCATTCAA+AGG | 0.564623 | tig0025721:+69538 | None:intergenic |
| TGTATTAATCCCATTAGTCA+TGG | 0.565064 | tig0025721:-67752 | Msa1424520:CDS |
| GAGCCGAGGAATTGCATTGG+AGG | 0.566036 | tig0025721:-65785 | Msa1424520:CDS |
| TGCAGTTGCTCCTGTGACTG+AGG | 0.566128 | tig0025721:-69449 | Msa1424520:CDS |
| GATAGAGATAGATCCAACTA+GGG | 0.567963 | tig0025721:-69641 | Msa1424520:CDS |
| AGCAGCCAAGGCCTGTGGAA+TGG | 0.570357 | tig0025721:+65442 | None:intergenic |
| TGCTCCTGTGACTGAGGAGA+AGG | 0.572209 | tig0025721:-69443 | Msa1424520:CDS |
| TGTGAGCCGAGGAATTGCAT+TGG | 0.574624 | tig0025721:-65788 | Msa1424520:CDS |
| CAGTTATCTTGTTCCTTATG+CGG | 0.574780 | tig0025721:-65246 | Msa1424520:CDS |
| TTAGTCATGGTACCAGTCAT+GGG | 0.575195 | tig0025721:-67739 | Msa1424520:CDS |
| ACACAGTATAGCAGCAGCCA+AGG | 0.577141 | tig0025721:+65430 | None:intergenic |
| AGGATGGAATGGACATTCCA+AGG | 0.577433 | tig0025721:+65309 | None:intergenic |
| GCTTGATGTCTATCCTACTC+AGG | 0.579268 | tig0025721:-67171 | Msa1424520:intron |
| GGTGGCAAGTAGGAGAGTAG+TGG | 0.580576 | tig0025721:-65674 | Msa1424520:CDS |
| TCCAAGCAAATACCAGCTTG+TGG | 0.580768 | tig0025721:+66633 | None:intergenic |
| CTTATGCGGCAGCGTCAAGT+GGG | 0.584023 | tig0025721:-65232 | Msa1424520:CDS |
| AGATTGCAGCGAGGCATCCG+CGG | 0.585119 | tig0025721:+64898 | None:intergenic |
| TGGTATTGTTGAAAATAGGA+TGG | 0.586767 | tig0025721:+65293 | None:intergenic |
| ACATCACAAAGGTGGCAAGT+AGG | 0.589236 | tig0025721:-65684 | Msa1424520:CDS |
| AGTTCTAGCAAGTCACAACA+AGG | 0.591386 | tig0025721:-64578 | Msa1424520:three_prime_UTR |
| CTTTACCTACAAATGAGAAG+AGG | 0.593632 | tig0025721:+65629 | None:intergenic |
| TTCTAGCAAGTCACAACAAG+GGG | 0.598030 | tig0025721:-64576 | None:intergenic |
| GTATAAGACTTGACTCAGGC+TGG | 0.598503 | tig0025721:+65273 | None:intergenic |
| CCAGCTTCACAGTCACAAGC+TGG | 0.599990 | tig0025721:-69604 | Msa1424520:CDS |
| AAACCTACAGCAGCAACCGT+TGG | 0.601364 | tig0025721:+66678 | None:intergenic |
| GTTCATGGGCTAAGAAAACT+GGG | 0.602879 | tig0025721:-69759 | Msa1424520:CDS |
| TAGGTTAATCAACCCTGTTG+TGG | 0.603357 | tig0025721:-66706 | Msa1424520:CDS |
| TGATTATGGAAGTCCTGAAG+TGG | 0.603711 | tig0025721:+66009 | None:intergenic |
| GAAATTTAGACACATAATGA+GGG | 0.604178 | tig0025721:-67251 | Msa1424520:CDS |
| CACAATTAACATCACAAAGG+TGG | 0.604324 | tig0025721:-65692 | Msa1424520:CDS |
| AGGCCTGTGGAATGGAAGCA+AGG | 0.607804 | tig0025721:+65450 | None:intergenic |
| CTTTGAATGGTGATGGTGAG+AGG | 0.613652 | tig0025721:-69537 | Msa1424520:CDS |
| GGTAATGGTGGTAATGGTCA+TGG | 0.614747 | tig0025721:-69478 | Msa1424520:CDS |
| AAGAACGAGGAGTGTATACA+TGG | 0.615795 | tig0025721:-64940 | Msa1424520:CDS |
| AGTCGATAGGCCCAATGCCA+CGG | 0.617446 | tig0025721:+65391 | None:intergenic |
| GAATTCCTTATCCTTTACAG+TGG | 0.622024 | tig0025721:-66046 | Msa1424520:CDS |
| CATGGTGGTTACACTGTTGG+TGG | 0.626703 | tig0025721:-64999 | Msa1424520:CDS |
| GAACATGGTGGTTACACTGT+TGG | 0.627072 | tig0025721:-65002 | Msa1424520:CDS |
| TGCAGCAGTAGACAATGCAT+CGG | 0.629989 | tig0025721:+66076 | None:intergenic |
| GTTAATGTGAATGGTAATGG+TGG | 0.636549 | tig0025721:-69490 | Msa1424520:CDS |
| GACCATACTGTAAAGTCGAT+AGG | 0.637354 | tig0025721:+65378 | None:intergenic |
| GCATAAGGAACAAGATAACT+GGG | 0.640702 | tig0025721:+65248 | None:intergenic |
| GATGAGGAGAATGTGATACA+TGG | 0.641286 | tig0025721:-69421 | Msa1424520:CDS |
| ATAGCAGCAGCCAAGGCCTG+TGG | 0.643514 | tig0025721:+65437 | None:intergenic |
| GGCAGTATAAGACTTGACTC+AGG | 0.653391 | tig0025721:+65269 | None:intergenic |
| TCAGTAAGAATGTTTGAACT+CGG | 0.663142 | tig0025721:+66149 | None:intergenic |
| GTCATGGTACCAGTCATGGG+TGG | 0.663447 | tig0025721:-67736 | Msa1424520:CDS |
| ATTCCTTATCCTTTACAGTG+GGG | 0.666964 | tig0025721:-66044 | Msa1424520:CDS |
| ATATACCATGAAGCATTGCA+GGG | 0.667424 | tig0025721:-66108 | Msa1424520:CDS |
| ACTCCAGGAGTTGTGAGCCG+AGG | 0.668659 | tig0025721:-65799 | Msa1424520:CDS |
| GAGAATGTGATACATGGTGA+TGG | 0.674141 | tig0025721:-69415 | Msa1424520:CDS |
| CCGTTGGCGCAACCACAACA+GGG | 0.681677 | tig0025721:+66694 | None:intergenic |
| GTTCTAGCAAGTCACAACAA+GGG | 0.681907 | tig0025721:-64577 | None:intergenic |
| CCGGGAAGTAAACAAGAACG+AGG | 0.685706 | tig0025721:-64953 | Msa1424520:CDS |
| GAGAGCTGAAGACATTGCCG+CGG | 0.710630 | tig0025721:-64915 | Msa1424520:CDS |
| GCACACAATTAACATCACAA+AGG | 0.716995 | tig0025721:-65695 | Msa1424520:CDS |
| ATAGAGATAGATCCAACTAG+GGG | 0.726766 | tig0025721:-69640 | Msa1424520:CDS |
| GGAATATTCAGATTGCAGCG+AGG | 0.745841 | tig0025721:+64889 | None:intergenic |
| TCTTATGTCCATGAACATGG+TGG | 0.757467 | tig0025721:-65014 | Msa1424520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATAAAAAATAGTTATAT+CGG | - | tig0025721:65863-65882 | Msa1424520:intron | 10.0% |
| !!! | AAAATGAATTATTACTTTTT+GGG | + | tig0025721:66554-66573 | None:intergenic | 10.0% |
| !!! | AAAAATGAATTATTACTTTT+TGG | + | tig0025721:66555-66574 | None:intergenic | 10.0% |
| !!! | AATTGTATTTTTATTTTTGT+AGG | - | tig0025721:68919-68938 | Msa1424520:intron | 10.0% |
| !!! | TTATGTTATTGTTTTTATGT+TGG | - | tig0025721:65133-65152 | Msa1424520:intron | 15.0% |
| !!! | CAATATGTTATATTTTAGTT+TGG | - | tig0025721:65182-65201 | Msa1424520:intron | 15.0% |
| !!! | TTTTATGAACATTTGAATTT+TGG | - | tig0025721:65276-65295 | Msa1424520:CDS | 15.0% |
| !! | ACATAAAAAATAGTTATATC+GGG | - | tig0025721:65864-65883 | Msa1424520:intron | 15.0% |
| !!! | TTTTGTTTAATCTAAAAAAC+AGG | - | tig0025721:66191-66210 | Msa1424520:CDS | 15.0% |
| !!! | TATTTTTTAAAAGAAAATGC+TGG | + | tig0025721:66406-66425 | None:intergenic | 15.0% |
| !! | TTACAAATCACATTAAAATT+TGG | - | tig0025721:67069-67088 | Msa1424520:intron | 15.0% |
| !! | AAGATATAAAAATTAATCCT+AGG | + | tig0025721:67474-67493 | None:intergenic | 15.0% |
| !! | AATTACATTTAAATATTTGC+AGG | - | tig0025721:68146-68165 | Msa1424520:intron | 15.0% |
| !!! | ATCATATTTACATTTTTAGA+TGG | - | tig0025721:68462-68481 | Msa1424520:intron | 15.0% |
| !! | ATAATATAATTCTGCAATTA+TGG | + | tig0025721:68827-68846 | None:intergenic | 15.0% |
| !!! | TATTGTTTTTATGTTGGTTA+TGG | - | tig0025721:65139-65158 | Msa1424520:intron | 20.0% |
| !!! | ATCTTGTTATAGATTAGATT+AGG | - | tig0025721:65369-65388 | Msa1424520:CDS | 20.0% |
| !! | AAATGAGAAGATAATCAAAT+AGG | - | tig0025721:66425-66444 | Msa1424520:intron | 20.0% |
| !! | ATGATATGTATATAGAAACT+GGG | + | tig0025721:66464-66483 | None:intergenic | 20.0% |
| !! | AATGATATGTATATAGAAAC+TGG | + | tig0025721:66465-66484 | None:intergenic | 20.0% |
| !! | AATTAACATGATTATGTTCT+TGG | - | tig0025721:66521-66540 | Msa1424520:intron | 20.0% |
| !! | AAACAACATTGTAGAAATTA+CGG | + | tig0025721:66808-66827 | None:intergenic | 20.0% |
| !! | TTATAAATGCTCAAGAATAT+CGG | - | tig0025721:66925-66944 | Msa1424520:intron | 20.0% |
| !!! | ATTTTAATGTGATTTGTAAC+AGG | + | tig0025721:67068-67087 | None:intergenic | 20.0% |
| !! | AAATATGCAGGATTTAATAA+GGG | + | tig0025721:67129-67148 | None:intergenic | 20.0% |
| !!! | ATTTGATAATAAGATGATAC+TGG | + | tig0025721:67541-67560 | None:intergenic | 20.0% |
| !!! | ATTGAACTTTTATCAATAAG+AGG | - | tig0025721:67634-67653 | Msa1424520:intron | 20.0% |
| !!! | TCATAAGTGTTTGTTATTTT+AGG | + | tig0025721:68127-68146 | None:intergenic | 20.0% |
| !! | AAATATTTGAACTTCAATTC+AGG | + | tig0025721:68874-68893 | None:intergenic | 20.0% |
| !! | GTTCAAATATTTCTTTATAC+AGG | - | tig0025721:68882-68901 | Msa1424520:intron | 20.0% |
| !!! | TTTTATTTTTGTAGGAAAAG+TGG | - | tig0025721:68927-68946 | Msa1424520:intron | 20.0% |
| !!! | TTTATTTTTGTAGGAAAAGT+GGG | - | tig0025721:68928-68947 | Msa1424520:intron | 20.0% |
| !!! | TTTTAAGTAATACTACAATG+AGG | + | tig0025721:69261-69280 | None:intergenic | 20.0% |
| !!! | TACTTAAAAACTTGTTTAGA+CGG | - | tig0025721:69272-69291 | Msa1424520:intron | 20.0% |
| !! | TATTACTAGCAACATTAAAT+TGG | - | tig0025721:69664-69683 | Msa1424520:CDS | 20.0% |
| !!! | AGCTTTGAATTATTCATTAT+TGG | - | tig0025721:69691-69710 | Msa1424520:CDS | 20.0% |
| ! | AAATTTAACTAACCTAAACC+CGG | + | tig0025721:65113-65132 | None:intergenic | 25.0% |
| !!! | TGGTTTAACTTGAATTTATG+CGG | - | tig0025721:65241-65260 | Msa1424520:CDS | 25.0% |
| ! | TGTTATAGATTAGATTAGGA+AGG | - | tig0025721:65373-65392 | Msa1424520:CDS | 25.0% |
| ! | CATATGAATATGAATGAATG+AGG | - | tig0025721:65509-65528 | Msa1424520:intron | 25.0% |
| ! | ATATAAGATGTCTAGATTCA+AGG | - | tig0025721:65542-65561 | Msa1424520:intron | 25.0% |
| ! | AGCAAAAATTCTACTTAAAG+GGG | + | tig0025721:65615-65634 | None:intergenic | 25.0% |
| ! | GAGCAAAAATTCTACTTAAA+GGG | + | tig0025721:65616-65635 | None:intergenic | 25.0% |
| ! | TGAGCAAAAATTCTACTTAA+AGG | + | tig0025721:65617-65636 | None:intergenic | 25.0% |
| ! | CTGATAAAAGCAACTTAATA+AGG | - | tig0025721:66328-66347 | Msa1424520:intron | 25.0% |
| !!! | TTTTAAAAGAAAATGCTGGT+TGG | + | tig0025721:66402-66421 | None:intergenic | 25.0% |
| !! | TTTCTGTTTGTTAATGTAGT+AGG | + | tig0025721:66973-66992 | None:intergenic | 25.0% |
| ! | GAAATATGCAGGATTTAATA+AGG | + | tig0025721:67130-67149 | None:intergenic | 25.0% |
| ! | ATTTCTGAATTGAAATATGC+AGG | + | tig0025721:67141-67160 | None:intergenic | 25.0% |
| ! | AGAAATTTAGACACATAATG+AGG | - | tig0025721:67155-67174 | Msa1424520:intron | 25.0% |
| ! | GAAATTTAGACACATAATGA+GGG | - | tig0025721:67156-67175 | Msa1424520:intron | 25.0% |
| ! | TTCAATATTCCAATGTATCT+TGG | - | tig0025721:67204-67223 | Msa1424520:CDS | 25.0% |
| ! | TCAATATTCCAATGTATCTT+GGG | - | tig0025721:67205-67224 | Msa1424520:CDS | 25.0% |
| !! | TCAACACAGAAAAAAAGTTT+TGG | + | tig0025721:67299-67318 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTCTGTGTTGAAT+TGG | - | tig0025721:67301-67320 | Msa1424520:intron | 25.0% |
| !!! | AATATCTTAGTTTGTCCTTA+GGG | - | tig0025721:67419-67438 | Msa1424520:intron | 25.0% |
| !! | ATAATAAGATGATACTGGTT+TGG | + | tig0025721:67536-67555 | None:intergenic | 25.0% |
| ! | AACTATTTACAATTTGTCGT+AGG | - | tig0025721:67682-67701 | Msa1424520:intron | 25.0% |
| !! | TTATCTGAATAGTTTTCTCA+TGG | - | tig0025721:67874-67893 | Msa1424520:intron | 25.0% |
| ! | CTTGATTTATAAACATGTCA+CGG | - | tig0025721:67918-67937 | Msa1424520:intron | 25.0% |
| ! | AACAAGACAAAAAGAAGAAA+TGG | + | tig0025721:67985-68004 | None:intergenic | 25.0% |
| ! | AGCGTATAATTAAATACAGT+TGG | - | tig0025721:69299-69318 | Msa1424520:intron | 25.0% |
| !!! | TAACCAGTTTTTGGAACAAA+AGG | + | tig0025721:64611-64630 | None:intergenic | 30.0% |
| ! | TTTGAACCTTTTCATCATAG+AGG | - | tig0025721:64719-64738 | Msa1424520:three_prime_UTR | 30.0% |
| !! | TTAGTTTGGAATGCTAGTTT+TGG | - | tig0025721:65196-65215 | Msa1424520:intron | 30.0% |
| GGTTTGAATTGAAAGTAGTT+TGG | - | tig0025721:65221-65240 | Msa1424520:CDS | 30.0% | |
| TAAGCAATGTGAATTGAATG+TGG | - | tig0025721:65319-65338 | Msa1424520:CDS | 30.0% | |
| AAGGATGACATGTATATGTT+TGG | - | tig0025721:65392-65411 | Msa1424520:CDS | 30.0% | |
| GACATGTATATGTTTGGATT+TGG | - | tig0025721:65398-65417 | Msa1424520:CDS | 30.0% | |
| CTAGAACTCAAATCAAGTAA+TGG | + | tig0025721:65432-65451 | None:intergenic | 30.0% | |
| TGCAAAGAATTCATAAGCAA+TGG | + | tig0025721:65479-65498 | None:intergenic | 30.0% | |
| TTGTATTTGCATTGTGGATT+CGG | - | tig0025721:65839-65858 | Msa1424520:CDS | 30.0% | |
| CTATATAGACAGGATTCAAA+GGG | + | tig0025721:65997-66016 | None:intergenic | 30.0% | |
| CTTTGAATCCTGTCTATATA+GGG | - | tig0025721:65996-66015 | Msa1424520:CDS | 30.0% | |
| AAGTAATAGTATTCTCGACT+AGG | + | tig0025721:66061-66080 | None:intergenic | 30.0% | |
| ! | ATTATGAAAGTACAGAAGTG+AGG | - | tig0025721:66110-66129 | Msa1424520:CDS | 30.0% |
| ! | TTATGAAAGTACAGAAGTGA+GGG | - | tig0025721:66111-66130 | Msa1424520:CDS | 30.0% |
| ATGATAATTGATCAGAGACA+TGG | + | tig0025721:66138-66157 | None:intergenic | 30.0% | |
| !! | CAACTTGAAAACAGTTTTAG+AGG | + | tig0025721:66168-66187 | None:intergenic | 30.0% |
| !!! | AAGTTGCTTTTATCAGTGAA+TGG | + | tig0025721:66324-66343 | None:intergenic | 30.0% |
| ATAGAAACTGGGAAAAATCA+GGG | + | tig0025721:66453-66472 | None:intergenic | 30.0% | |
| TATAGAAACTGGGAAAAATC+AGG | + | tig0025721:66454-66473 | None:intergenic | 30.0% | |
| GCAGTATCTCTTATCTATTA+TGG | - | tig0025721:66599-66618 | Msa1424520:CDS | 30.0% | |
| CTTACAGCACTATATATCAT+TGG | - | tig0025721:66622-66641 | Msa1424520:CDS | 30.0% | |
| TGTATTAATCCCATTAGTCA+TGG | - | tig0025721:66655-66674 | Msa1424520:CDS | 30.0% | |
| ATCGACTAGAGAGTAATAAA+TGG | + | tig0025721:66725-66744 | None:intergenic | 30.0% | |
| TACATTATTCTGATGACAGA+AGG | - | tig0025721:66773-66792 | Msa1424520:intron | 30.0% | |
| !! | TCTACAATGTTGTTTCTTTC+CGG | - | tig0025721:66813-66832 | Msa1424520:intron | 30.0% |
| GCATTTATAATGACTAATGC+CGG | + | tig0025721:66915-66934 | None:intergenic | 30.0% | |
| CTTAATTCATCAAACACTCA+AGG | - | tig0025721:66995-67014 | Msa1424520:intron | 30.0% | |
| GAGAATATATTCAAACGAAC+AGG | + | tig0025721:67102-67121 | None:intergenic | 30.0% | |
| ! | AAACTTTTTGTTACCTGAGT+AGG | + | tig0025721:67252-67271 | None:intergenic | 30.0% |
| !! | AAAAAGTTTTGGTGAACACA+AGG | + | tig0025721:67288-67307 | None:intergenic | 30.0% |
| TATCATGTGTCTCTTTATCT+CGG | + | tig0025721:67350-67369 | None:intergenic | 30.0% | |
| !! | GATATTCTAGAGTAATATCG+AGG | + | tig0025721:67405-67424 | None:intergenic | 30.0% |
| !! | GAATATCTTAGTTTGTCCTT+AGG | - | tig0025721:67418-67437 | Msa1424520:intron | 30.0% |
| CTTATCTTAGATCATTTCCT+AGG | - | tig0025721:67454-67473 | Msa1424520:intron | 30.0% | |
| AATAGAACCAATGCAATTTG+TGG | + | tig0025721:67810-67829 | None:intergenic | 30.0% | |
| !! | ATTGGTTCTATTATTCACTC+TGG | - | tig0025721:67818-67837 | Msa1424520:intron | 30.0% |
| CAGCATAAATTCGAAATAAG+TGG | + | tig0025721:68044-68063 | None:intergenic | 30.0% | |
| TCAGTAAGAATGTTTGAACT+CGG | + | tig0025721:68261-68280 | None:intergenic | 30.0% | |
| AATTCCTTATCCTTTACAGT+GGG | - | tig0025721:68362-68381 | Msa1424520:intron | 30.0% | |
| TTGTTGAAAATAGGATGGAA+TGG | + | tig0025721:69112-69131 | None:intergenic | 30.0% | |
| TGGTATTGTTGAAAATAGGA+TGG | + | tig0025721:69117-69136 | None:intergenic | 30.0% | |
| ! | AAAATCAAGCTGACAAGTTT+TGG | + | tig0025721:69362-69381 | None:intergenic | 30.0% |
| CACTTCTGACATTAACAAAA+AGG | - | tig0025721:69595-69614 | Msa1424520:CDS | 30.0% | |
| ATTGCAGATCATGAAGAAAA+AGG | - | tig0025721:69619-69638 | Msa1424520:CDS | 30.0% | |
| !! | GGGTTTGTTTCTGATTATTC+AGG | - | tig0025721:64668-64687 | Msa1424520:three_prime_UTR | 35.0% |
| ! | CTTTTCATCATAGAGGAAGA+GGG | - | tig0025721:64726-64745 | Msa1424520:three_prime_UTR | 35.0% |
| GTTGGATCTATCTCTATCTT+AGG | + | tig0025721:64764-64783 | None:intergenic | 35.0% | |
| AGATAGAGATAGATCCAACT+AGG | - | tig0025721:64765-64784 | Msa1424520:three_prime_UTR | 35.0% | |
| GATAGAGATAGATCCAACTA+GGG | - | tig0025721:64766-64785 | Msa1424520:three_prime_UTR | 35.0% | |
| ATAGAGATAGATCCAACTAG+GGG | - | tig0025721:64767-64786 | Msa1424520:three_prime_UTR | 35.0% | |
| ! | AGAGGAAAGTTGGTTTAAGA+GGG | - | tig0025721:64888-64907 | Msa1424520:CDS | 35.0% |
| ! | AAAGTTGGTTTAAGAGGGAA+TGG | - | tig0025721:64893-64912 | Msa1424520:CDS | 35.0% |
| GGTGTTAATGTGAATGGTAA+TGG | - | tig0025721:64914-64933 | Msa1424520:CDS | 35.0% | |
| !! | GTTAATGTGAATGGTAATGG+TGG | - | tig0025721:64917-64936 | Msa1424520:CDS | 35.0% |
| !! | AGGTTAATGTTGTTTCCAGA+AGG | - | tig0025721:65023-65042 | Msa1424520:CDS | 35.0% |
| TTTCCAGAAGGAGTTGAATT+TGG | - | tig0025721:65035-65054 | Msa1424520:CDS | 35.0% | |
| GTGTGGACTTAAAGAAAATC+CGG | - | tig0025721:65091-65110 | Msa1424520:intron | 35.0% | |
| TGTGGACTTAAAGAAAATCC+GGG | - | tig0025721:65092-65111 | Msa1424520:intron | 35.0% | |
| CTTAAAGAAAATCCGGGTTT+AGG | - | tig0025721:65098-65117 | Msa1424520:intron | 35.0% | |
| !!! | TTTGGAATGCTAGTTTTGGT+TGG | - | tig0025721:65200-65219 | Msa1424520:intron | 35.0% |
| TGGAATGAGCTTATCATGTT+GGG | + | tig0025721:65586-65605 | None:intergenic | 35.0% | |
| ATGGAATGAGCTTATCATGT+TGG | + | tig0025721:65587-65606 | None:intergenic | 35.0% | |
| TCTACTTAAAGGGGAAAGAA+TGG | + | tig0025721:65606-65625 | None:intergenic | 35.0% | |
| ! | ATTTCTAGATAAAGGCTTGG+AGG | + | tig0025721:65724-65743 | None:intergenic | 35.0% |
| ! | AGGATTTCTAGATAAAGGCT+TGG | + | tig0025721:65727-65746 | None:intergenic | 35.0% |
| ! | AGTGGAGGATTTCTAGATAA+AGG | + | tig0025721:65732-65751 | None:intergenic | 35.0% |
| AAATACAATTGAGGCTGCAT+CGG | + | tig0025721:65827-65846 | None:intergenic | 35.0% | |
| CCACAATGCAAATACAATTG+AGG | + | tig0025721:65836-65855 | None:intergenic | 35.0% | |
| CCTCAATTGTATTTGCATTG+TGG | - | tig0025721:65833-65852 | Msa1424520:CDS | 35.0% | |
| ! | CCATTATTTGAAACCCTACA+CGG | - | tig0025721:65909-65928 | Msa1424520:intron | 35.0% |
| ! | CATTATTTGAAACCCTACAC+GGG | - | tig0025721:65910-65929 | Msa1424520:intron | 35.0% |
| CCTATATAGACAGGATTCAA+AGG | + | tig0025721:65998-66017 | None:intergenic | 35.0% | |
| CCTTTGAATCCTGTCTATAT+AGG | - | tig0025721:65995-66014 | Msa1424520:CDS | 35.0% | |
| ACTTCTTTCCCTATATAGAC+AGG | + | tig0025721:66007-66026 | None:intergenic | 35.0% | |
| AAGTTATCTAAGTCGTGTTG+AGG | + | tig0025721:66090-66109 | None:intergenic | 35.0% | |
| TAGAAACTGGGAAAAATCAG+GGG | + | tig0025721:66452-66471 | None:intergenic | 35.0% | |
| ACTATACTGCACTCTTACTT+TGG | - | tig0025721:66843-66862 | Msa1424520:intron | 35.0% | |
| ! | CTTCAAGGTGCTATAATTGT+TGG | - | tig0025721:67181-67200 | Msa1424520:CDS | 35.0% |
| CACTAAATCCCAAGATACAT+TGG | + | tig0025721:67216-67235 | None:intergenic | 35.0% | |
| CAATGTATCTTGGGATTTAG+TGG | - | tig0025721:67214-67233 | Msa1424520:CDS | 35.0% | |
| AAGATTGAAAACTGACCCTA+AGG | + | tig0025721:67437-67456 | None:intergenic | 35.0% | |
| GTTGTGGGACATTAGATAAA+AGG | + | tig0025721:67592-67611 | None:intergenic | 35.0% | |
| !! | ATTGCTTTTGCTGAAGTTGT+GGG | + | tig0025721:67607-67626 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGAAGCATCTTCG+AGG | - | tig0025721:68000-68019 | Msa1424520:intron | 35.0% |
| ATGTTTGAACTCGGTACATT+GGG | + | tig0025721:68252-68271 | None:intergenic | 35.0% | |
| AATGTTTGAACTCGGTACAT+TGG | + | tig0025721:68253-68272 | None:intergenic | 35.0% | |
| !! | ATATACCATGAAGCATTGCA+GGG | - | tig0025721:68299-68318 | Msa1424520:intron | 35.0% |
| GAATTCCTTATCCTTTACAG+TGG | - | tig0025721:68361-68380 | Msa1424520:intron | 35.0% | |
| ATTCCTTATCCTTTACAGTG+GGG | - | tig0025721:68363-68382 | Msa1424520:intron | 35.0% | |
| AAGTCCTGAAGTGGAAAATA+GGG | + | tig0025721:68392-68411 | None:intergenic | 35.0% | |
| TGACACTATGACCATGATTA+TGG | + | tig0025721:68415-68434 | None:intergenic | 35.0% | |
| ATAAGTTCCAACCTGCAAAA+AGG | + | tig0025721:68552-68571 | None:intergenic | 35.0% | |
| ! | CGTCACTTCAAGTTAATTCA+AGG | - | tig0025721:68579-68598 | Msa1424520:intron | 35.0% |
| !! | TAGTATATTGGCTGGTCTTT+GGG | - | tig0025721:68652-68671 | Msa1424520:intron | 35.0% |
| GCACACAATTAACATCACAA+AGG | - | tig0025721:68712-68731 | Msa1424520:intron | 35.0% | |
| CACAATTAACATCACAAAGG+TGG | - | tig0025721:68715-68734 | Msa1424520:intron | 35.0% | |
| TTGATCCTCTTCTCATTTGT+AGG | - | tig0025721:68773-68792 | Msa1424520:intron | 35.0% | |
| CTTTACCTACAAATGAGAAG+AGG | + | tig0025721:68781-68800 | None:intergenic | 35.0% | |
| GTAGGTAAAGTAACAACACT+TGG | - | tig0025721:68791-68810 | Msa1424520:intron | 35.0% | |
| AATTCTGCAATTATGGACGT+TGG | + | tig0025721:68820-68839 | None:intergenic | 35.0% | |
| TGAACTTCAATTCAGGTGTT+AGG | + | tig0025721:68867-68886 | None:intergenic | 35.0% | |
| TGCTATACTGTGTTTCATGT+GGG | - | tig0025721:68987-69006 | Msa1424520:intron | 35.0% | |
| TTCAGGAACATGACAATTGT+CGG | - | tig0025721:69063-69082 | Msa1424520:intron | 35.0% | |
| AGGCTGGTATTGTTGAAAAT+AGG | + | tig0025721:69121-69140 | None:intergenic | 35.0% | |
| GCATAAGGAACAAGATAACT+GGG | + | tig0025721:69162-69181 | None:intergenic | 35.0% | |
| CAGTTATCTTGTTCCTTATG+CGG | - | tig0025721:69161-69180 | Msa1424520:intron | 35.0% | |
| ! | TTACTTGTTTAAGGCCTGAA+TGG | + | tig0025721:69206-69225 | None:intergenic | 35.0% |
| CGACATGACTTACTTGTTTA+AGG | + | tig0025721:69215-69234 | None:intergenic | 35.0% | |
| !!! | CAACACCATGCAAGTTTTTT+TGG | + | tig0025721:69547-69566 | None:intergenic | 35.0% |
| !! | GGAACAAAAGGTGCAACTTT+TGG | + | tig0025721:64599-64618 | None:intergenic | 40.0% |
| ! | GCACCTTTTGTTCCAAAAAC+TGG | - | tig0025721:64605-64624 | Msa1424520:three_prime_UTR | 40.0% |
| !! | CTTGGGTTGTAACCAGTTTT+TGG | + | tig0025721:64620-64639 | None:intergenic | 40.0% |
| ACCCAAGAGAATTACGTTCA+TGG | - | tig0025721:64633-64652 | Msa1424520:three_prime_UTR | 40.0% | |
| CCCATGAACGTAATTCTCTT+GGG | + | tig0025721:64637-64656 | None:intergenic | 40.0% | |
| CCCAAGAGAATTACGTTCAT+GGG | - | tig0025721:64634-64653 | Msa1424520:three_prime_UTR | 40.0% | |
| ! | GTTCATGGGCTAAGAAAACT+GGG | - | tig0025721:64648-64667 | Msa1424520:three_prime_UTR | 40.0% |
| TCTGATTATTCAGGTGAAGC+AGG | - | tig0025721:64677-64696 | Msa1424520:three_prime_UTR | 40.0% | |
| CTGATTATTCAGGTGAAGCA+GGG | - | tig0025721:64678-64697 | Msa1424520:three_prime_UTR | 40.0% | |
| CCTCTTCCTCTATGATGAAA+AGG | + | tig0025721:64728-64747 | None:intergenic | 40.0% | |
| ! | CCTTTTCATCATAGAGGAAG+AGG | - | tig0025721:64725-64744 | Msa1424520:three_prime_UTR | 40.0% |
| ! | GAACCTGTTTTGCCTTTGAA+TGG | - | tig0025721:64857-64876 | Msa1424520:CDS | 40.0% |
| TCACCATTCAAAGGCAAAAC+AGG | + | tig0025721:64863-64882 | None:intergenic | 40.0% | |
| ! | GTTTTGCCTTTGAATGGTGA+TGG | - | tig0025721:64863-64882 | Msa1424520:CDS | 40.0% |
| ! | GAGAGGAAAGTTGGTTTAAG+AGG | - | tig0025721:64887-64906 | Msa1424520:CDS | 40.0% |
| ! | GGGAATGGTGTTAATGTGAA+TGG | - | tig0025721:64908-64927 | Msa1424520:CDS | 40.0% |
| !! | GTGAATGGTAATGGTGGTAA+TGG | - | tig0025721:64923-64942 | Msa1424520:CDS | 40.0% |
| GATGAGGAGAATGTGATACA+TGG | - | tig0025721:64986-65005 | Msa1424520:CDS | 40.0% | |
| GAGAATGTGATACATGGTGA+TGG | - | tig0025721:64992-65011 | Msa1424520:CDS | 40.0% | |
| !! | ACATGGTGATGGTGAAGTTA+AGG | - | tig0025721:65003-65022 | Msa1424520:CDS | 40.0% |
| TCTCCAAATTCAACTCCTTC+TGG | + | tig0025721:65041-65060 | None:intergenic | 40.0% | |
| GAAGGAGTTGAATTTGGAGA+TGG | - | tig0025721:65041-65060 | Msa1424520:intron | 40.0% | |
| !! | TTGAATTTGGAGATGGTGGA+TGG | - | tig0025721:65048-65067 | Msa1424520:intron | 40.0% |
| AGTCCACACTTCAATTCAGA+TGG | + | tig0025721:65080-65099 | None:intergenic | 40.0% | |
| TCGGAATCATATTGAAGTGG+AGG | + | tig0025721:65747-65766 | None:intergenic | 40.0% | |
| GCTTCGGAATCATATTGAAG+TGG | + | tig0025721:65750-65769 | None:intergenic | 40.0% | |
| !! | CGCTATTTTAAACTCGGCTT+CGG | + | tig0025721:65766-65785 | None:intergenic | 40.0% |
| ! | CGAAGCCGAGTTTAAAATAG+CGG | - | tig0025721:65764-65783 | Msa1424520:CDS | 40.0% |
| TAATTCCACGTTGTGATCAC+AGG | - | tig0025721:65793-65812 | Msa1424520:CDS | 40.0% | |
| CCGTGTAGGGTTTCAAATAA+TGG | + | tig0025721:65912-65931 | None:intergenic | 40.0% | |
| GCCTTGTCAAGTCAGATTAT+TGG | - | tig0025721:65932-65951 | Msa1424520:intron | 40.0% | |
| ! | GCCAATAATCTGACTTGACA+AGG | + | tig0025721:65936-65955 | None:intergenic | 40.0% |
| !! | GAATCGAACTTGTTGGTTTC+AGG | + | tig0025721:65958-65977 | None:intergenic | 40.0% |
| GCAACTAGAATCGAACTTGT+TGG | + | tig0025721:65965-65984 | None:intergenic | 40.0% | |
| AACACTTGCAGTCATCTCAT+TGG | + | tig0025721:66289-66308 | None:intergenic | 40.0% | |
| GAGATGACTGCAAGTGTTTA+TGG | - | tig0025721:66291-66310 | Msa1424520:intron | 40.0% | |
| AGAAACTGGGAAAAATCAGG+GGG | + | tig0025721:66451-66470 | None:intergenic | 40.0% | |
| CAGCACTATATATCATTGGC+TGG | - | tig0025721:66626-66645 | Msa1424520:CDS | 40.0% | |
| TGACTGGTACCATGACTAAT+GGG | + | tig0025721:66667-66686 | None:intergenic | 40.0% | |
| ATGACTGGTACCATGACTAA+TGG | + | tig0025721:66668-66687 | None:intergenic | 40.0% | |
| ATTAGTCATGGTACCAGTCA+TGG | - | tig0025721:66667-66686 | Msa1424520:CDS | 40.0% | |
| TTAGTCATGGTACCAGTCAT+GGG | - | tig0025721:66668-66687 | Msa1424520:CDS | 40.0% | |
| CTCGTTTGTGTATTTAGCAC+CGG | - | tig0025721:66893-66912 | Msa1424520:intron | 40.0% | |
| CACATAATGAGGGAACTTCA+AGG | - | tig0025721:67166-67185 | Msa1424520:intron | 40.0% | |
| TGGTGAACACAAGGAAGATA+TGG | + | tig0025721:67279-67298 | None:intergenic | 40.0% | |
| ATGTGTCTCTTTATCTCGGA+TGG | + | tig0025721:67346-67365 | None:intergenic | 40.0% | |
| !! | CATTGCTTTTGCTGAAGTTG+TGG | + | tig0025721:67608-67627 | None:intergenic | 40.0% |
| TAGGTTAATCAACCCTGTTG+TGG | - | tig0025721:67701-67720 | Msa1424520:intron | 40.0% | |
| GGTTTAGCGTTCTTCAGTTA+CGG | - | tig0025721:67747-67766 | Msa1424520:CDS | 40.0% | |
| CACTGTTCCACAAATTGCAT+TGG | - | tig0025721:67800-67819 | Msa1424520:CDS | 40.0% | |
| ATAACTGAAGAACCCTGCAT+TGG | + | tig0025721:67858-67877 | None:intergenic | 40.0% | |
| CTTCGAGGAATATCTATCTC+TGG | - | tig0025721:68015-68034 | Msa1424520:intron | 40.0% | |
| CAAGTTATTGTTGCGCTCAA+CGG | + | tig0025721:68174-68193 | None:intergenic | 40.0% | |
| ! | TTTGCATCCCTTTTAACAGC+TGG | - | tig0025721:68198-68217 | Msa1424520:intron | 40.0% |
| ! | TTGCATCCCTTTTAACAGCT+GGG | - | tig0025721:68199-68218 | Msa1424520:intron | 40.0% |
| !! | CATATACCATGAAGCATTGC+AGG | - | tig0025721:68298-68317 | Msa1424520:intron | 40.0% |
| ATACCCCACTGTAAAGGATA+AGG | + | tig0025721:68369-68388 | None:intergenic | 40.0% | |
| ! | GTATCCCTATTTTCCACTTC+AGG | - | tig0025721:68385-68404 | Msa1424520:intron | 40.0% |
| GAAGTCCTGAAGTGGAAAAT+AGG | + | tig0025721:68393-68412 | None:intergenic | 40.0% | |
| TGATTATGGAAGTCCTGAAG+TGG | + | tig0025721:68401-68420 | None:intergenic | 40.0% | |
| CTTCAGGACTTCCATAATCA+TGG | - | tig0025721:68401-68420 | Msa1424520:intron | 40.0% | |
| AATCATGGTCATAGTGTCAC+TGG | - | tig0025721:68416-68435 | Msa1424520:intron | 40.0% | |
| ! | ACTGGTTGCTTCTGTTGATT+CGG | - | tig0025721:68434-68453 | Msa1424520:intron | 40.0% |
| ! | AAAGCAAGTATCGCATTCAG+TGG | - | tig0025721:68497-68516 | Msa1424520:intron | 40.0% |
| !!! | CACTGGTTTATCCTTTTTGC+AGG | - | tig0025721:68538-68557 | Msa1424520:intron | 40.0% |
| ! | GGTTTATCCTTTTTGCAGGT+TGG | - | tig0025721:68542-68561 | Msa1424520:intron | 40.0% |
| GGAGGGTTTCTGTAGTATAT+TGG | - | tig0025721:68640-68659 | Msa1424520:intron | 40.0% | |
| GGTTTCTGTAGTATATTGGC+TGG | - | tig0025721:68644-68663 | Msa1424520:intron | 40.0% | |
| !! | GTAGTATATTGGCTGGTCTT+TGG | - | tig0025721:68651-68670 | Msa1424520:intron | 40.0% |
| !! | AGTATATTGGCTGGTCTTTG+GGG | - | tig0025721:68653-68672 | Msa1424520:intron | 40.0% |
| TTCTGTCAAAGTCGTTGAAC+CGG | + | tig0025721:68687-68706 | None:intergenic | 40.0% | |
| CTGCTATACTGTGTTTCATG+TGG | - | tig0025721:68986-69005 | Msa1424520:intron | 40.0% | |
| GACCATACTGTAAAGTCGAT+AGG | + | tig0025721:69032-69051 | None:intergenic | 40.0% | |
| CGCATAAGGAACAAGATAAC+TGG | + | tig0025721:69163-69182 | None:intergenic | 40.0% | |
| ! | TGTTTAAGGCCTGAATGGAA+TGG | + | tig0025721:69201-69220 | None:intergenic | 40.0% |
| TCTTATGTCCATGAACATGG+TGG | - | tig0025721:69393-69412 | Msa1424520:CDS | 40.0% | |
| ! | AAGAACGAGGAGTGTATACA+TGG | - | tig0025721:69467-69486 | Msa1424520:CDS | 40.0% |
| !!! | CCATGCAAGTTTTTTTGGCA+GGG | + | tig0025721:69542-69561 | None:intergenic | 40.0% |
| !!! | ACCATGCAAGTTTTTTTGGC+AGG | + | tig0025721:69543-69562 | None:intergenic | 40.0% |
| ! | TTGCTGTTGGTTGAAGTGAT+TGG | - | tig0025721:69564-69583 | Msa1424520:CDS | 40.0% |
| ! | TGCTGTTGGTTGAAGTGATT+GGG | - | tig0025721:69565-69584 | Msa1424520:CDS | 40.0% |
| GCCCATGAACGTAATTCTCT+TGG | + | tig0025721:64638-64657 | None:intergenic | 45.0% | |
| ! | CGTTCATGGGCTAAGAAAAC+TGG | - | tig0025721:64647-64666 | Msa1424520:three_prime_UTR | 45.0% |
| ! | ACAGTCACAAGCTGGTGTTT+TGG | - | tig0025721:64811-64830 | Msa1424520:three_prime_UTR | 45.0% |
| !!! | GTGTTTTGGAGGAGAATGTG+AGG | - | tig0025721:64825-64844 | Msa1424520:three_prime_UTR | 45.0% |
| CTCTCACCATCACCATTCAA+AGG | + | tig0025721:64872-64891 | None:intergenic | 45.0% | |
| !! | CTTTGAATGGTGATGGTGAG+AGG | - | tig0025721:64870-64889 | Msa1424520:CDS | 45.0% |
| !! | GGTAATGGTGGTAATGGTCA+TGG | - | tig0025721:64929-64948 | Msa1424520:CDS | 45.0% |
| GGAGTTGAATTTGGAGATGG+TGG | - | tig0025721:65044-65063 | Msa1424520:intron | 45.0% | |
| !! | ATTTGGAGATGGTGGATGGA+AGG | - | tig0025721:65052-65071 | Msa1424520:intron | 45.0% |
| !! | TTTGGAGATGGTGGATGGAA+GGG | - | tig0025721:65053-65072 | Msa1424520:intron | 45.0% |
| GGACCATCTGAATTGAAGTG+TGG | - | tig0025721:65074-65093 | Msa1424520:intron | 45.0% | |
| ! | GTTTTGCCATGTCTGAATGC+TGG | - | tig0025721:65670-65689 | Msa1424520:CDS | 45.0% |
| !! | GATAAAGGCTTGGAGGTGTT+GGG | + | tig0025721:65717-65736 | None:intergenic | 45.0% |
| ! | AGATAAAGGCTTGGAGGTGT+TGG | + | tig0025721:65718-65737 | None:intergenic | 45.0% |
| !! | CGCGACCGCTATTTTAAACT+CGG | + | tig0025721:65772-65791 | None:intergenic | 45.0% |
| ! | CGAGTTTAAAATAGCGGTCG+CGG | - | tig0025721:65770-65789 | Msa1424520:CDS | 45.0% |
| CATTTCCTGTGATCACAACG+TGG | + | tig0025721:65801-65820 | None:intergenic | 45.0% | |
| GGTCCTAAATCAGTCAGTCA+TGG | - | tig0025721:65885-65904 | Msa1424520:intron | 45.0% | |
| ! | GGTCCATGACTGACTGATTT+AGG | + | tig0025721:65891-65910 | None:intergenic | 45.0% |
| GTGCAGTATAGTTGTGATGC+CGG | + | tig0025721:66835-66854 | None:intergenic | 45.0% | |
| TCCCTTGCACTAAAGGAAGT+CGG | + | tig0025721:66872-66891 | None:intergenic | 45.0% | |
| GCTTGATGTCTATCCTACTC+AGG | - | tig0025721:67236-67255 | Msa1424520:CDS | 45.0% | |
| ! | AGTTACGGTTTTCCACAAGC+TGG | - | tig0025721:67762-67781 | Msa1424520:CDS | 45.0% |
| TCCACAAGCTGGTATTTGCT+TGG | - | tig0025721:67773-67792 | Msa1424520:CDS | 45.0% | |
| TCCAAGCAAATACCAGCTTG+TGG | + | tig0025721:67777-67796 | None:intergenic | 45.0% | |
| AGTCATGCAGTACCAATGCA+GGG | - | tig0025721:67843-67862 | Msa1424520:intron | 45.0% | |
| CGTTGAGCGCAACAATAACT+TGG | - | tig0025721:68172-68191 | Msa1424520:intron | 45.0% | |
| ! | TGCATCCCTTTTAACAGCTG+GGG | - | tig0025721:68200-68219 | Msa1424520:intron | 45.0% |
| TACACCCCCAGCTGTTAAAA+GGG | + | tig0025721:68208-68227 | None:intergenic | 45.0% | |
| ATACACCCCCAGCTGTTAAA+AGG | + | tig0025721:68209-68228 | None:intergenic | 45.0% | |
| TGCAGCAGTAGACAATGCAT+CGG | + | tig0025721:68334-68353 | None:intergenic | 45.0% | |
| ATGCATTGTCTACTGCTGCA+TGG | - | tig0025721:68334-68353 | Msa1424520:intron | 45.0% | |
| TGCATTGTCTACTGCTGCAT+GGG | - | tig0025721:68335-68354 | Msa1424520:intron | 45.0% | |
| ATAGGGATACCCCACTGTAA+AGG | + | tig0025721:68375-68394 | None:intergenic | 45.0% | |
| GTATCAAGACTCTGAGTCAC+TGG | - | tig0025721:68521-68540 | Msa1424520:intron | 45.0% | |
| AACCCTCCAATGCAATTCCT+CGG | + | tig0025721:68628-68647 | None:intergenic | 45.0% | |
| ACATCACAAAGGTGGCAAGT+AGG | - | tig0025721:68723-68742 | Msa1424520:intron | 45.0% | |
| ! | AGTAGGAGAGTAGTGGAACT+TGG | - | tig0025721:68740-68759 | Msa1424520:intron | 45.0% |
| !! | GGCCTATCGACTTTACAGTA+TGG | - | tig0025721:69027-69046 | Msa1424520:intron | 45.0% |
| ! | ATGGTCAATCAGCTAGCTTC+AGG | - | tig0025721:69046-69065 | Msa1424520:intron | 45.0% |
| AGGATGGAATGGACATTCCA+AGG | + | tig0025721:69101-69120 | None:intergenic | 45.0% | |
| GTATAAGACTTGACTCAGGC+TGG | + | tig0025721:69137-69156 | None:intergenic | 45.0% | |
| GGCAGTATAAGACTTGACTC+AGG | + | tig0025721:69141-69160 | None:intergenic | 45.0% | |
| CGCTCTTATGTCCATGAACA+TGG | - | tig0025721:69390-69409 | Msa1424520:CDS | 45.0% | |
| CAGTGTAACCACCATGTTCA+TGG | + | tig0025721:69404-69423 | None:intergenic | 45.0% | |
| GAACATGGTGGTTACACTGT+TGG | - | tig0025721:69405-69424 | Msa1424520:CDS | 45.0% | |
| !! | ACTGTTGGTGGCATTTCTAC+TGG | - | tig0025721:69420-69439 | Msa1424520:CDS | 45.0% |
| ! | CTCGTTCTTGTTTACTTCCC+GGG | + | tig0025721:69456-69475 | None:intergenic | 45.0% |
| ! | CCTCGTTCTTGTTTACTTCC+CGG | + | tig0025721:69457-69476 | None:intergenic | 45.0% |
| GGAATATTCAGATTGCAGCG+AGG | + | tig0025721:69521-69540 | None:intergenic | 45.0% | |
| CCCTGCCAAAAAAACTTGCA+TGG | - | tig0025721:69539-69558 | Msa1424520:CDS | 45.0% | |
| !! | AACTTGCATGGTGTTGCTGT+TGG | - | tig0025721:69551-69570 | Msa1424520:CDS | 45.0% |
| TGGATCTCAACACCCCTAGT+TGG | + | tig0025721:64782-64801 | None:intergenic | 50.0% | |
| CTTGTGACTGTGAAGCTGGT+TGG | + | tig0025721:64802-64821 | None:intergenic | 50.0% | |
| !! | GTCACAAGCTGGTGTTTTGG+AGG | - | tig0025721:64814-64833 | Msa1424520:three_prime_UTR | 50.0% |
| ! | GGTGATGGTGAGAGGAAAGT+TGG | - | tig0025721:64878-64897 | Msa1424520:CDS | 50.0% |
| TCATCCTTCTCCTCAGTCAC+AGG | + | tig0025721:64971-64990 | None:intergenic | 50.0% | |
| TGTGACTGAGGAGAAGGATG+AGG | - | tig0025721:64970-64989 | Msa1424520:CDS | 50.0% | |
| GACATGGCAAAACTCGTGCA+GGG | + | tig0025721:65663-65682 | None:intergenic | 50.0% | |
| AGACATGGCAAAACTCGTGC+AGG | + | tig0025721:65664-65683 | None:intergenic | 50.0% | |
| ACATCTGTTCCACCCATGAC+TGG | + | tig0025721:66683-66702 | None:intergenic | 50.0% | |
| ACCCGACTTCCTTTAGTGCA+AGG | - | tig0025721:66867-66886 | Msa1424520:intron | 50.0% | |
| CCCTTGCACTAAAGGAAGTC+GGG | + | tig0025721:66871-66890 | None:intergenic | 50.0% | |
| CCCGACTTCCTTTAGTGCAA+GGG | - | tig0025721:66868-66887 | Msa1424520:intron | 50.0% | |
| AACGAGCTCCCTTGCACTAA+AGG | + | tig0025721:66879-66898 | None:intergenic | 50.0% | |
| AAACCTACAGCAGCAACCGT+TGG | + | tig0025721:67732-67751 | None:intergenic | 50.0% | |
| GAGTCATGCAGTACCAATGC+AGG | - | tig0025721:67842-67861 | Msa1424520:intron | 50.0% | |
| ! | GCATCCCTTTTAACAGCTGG+GGG | - | tig0025721:68201-68220 | Msa1424520:intron | 50.0% |
| ATCAGCCCTGCAATGCTTCA+TGG | + | tig0025721:68307-68326 | None:intergenic | 50.0% | |
| AATTCAAGGCCTCCAACTCC+AGG | - | tig0025721:68593-68612 | Msa1424520:intron | 50.0% | |
| TGTGAGCCGAGGAATTGCAT+TGG | - | tig0025721:68619-68638 | Msa1424520:intron | 50.0% | |
| AGCCGAGGAATTGCATTGGA+GGG | - | tig0025721:68623-68642 | Msa1424520:intron | 50.0% | |
| TCTCCTTGCTTCCATTCCAC+AGG | - | tig0025721:68954-68973 | Msa1424520:intron | 50.0% | |
| ACACAGTATAGCAGCAGCCA+AGG | + | tig0025721:68980-68999 | None:intergenic | 50.0% | |
| TTTCATGTGGGCTCTTACCG+TGG | - | tig0025721:68999-69018 | Msa1424520:intron | 50.0% | |
| TCAAGTGGGCCATTCCATTC+AGG | - | tig0025721:69189-69208 | Msa1424520:intron | 50.0% | |
| CATGGTGGTTACACTGTTGG+TGG | - | tig0025721:69408-69427 | Msa1424520:CDS | 50.0% | |
| TCTACTGGACAACACTGTCC+CGG | - | tig0025721:69435-69454 | Msa1424520:CDS | 50.0% | |
| CCGGGAAGTAAACAAGAACG+AGG | - | tig0025721:69454-69473 | Msa1424520:CDS | 50.0% | |
| TCAGGTGAAGCAGGGACTAG+TGG | - | tig0025721:64686-64705 | Msa1424520:three_prime_UTR | 55.0% | |
| CCAGCTTGTGACTGTGAAGC+TGG | + | tig0025721:64806-64825 | None:intergenic | 55.0% | |
| CCAGCTTCACAGTCACAAGC+TGG | - | tig0025721:64803-64822 | Msa1424520:three_prime_UTR | 55.0% | |
| TGCAGTTGCTCCTGTGACTG+AGG | - | tig0025721:64958-64977 | Msa1424520:CDS | 55.0% | |
| TGCTCCTGTGACTGAGGAGA+AGG | - | tig0025721:64964-64983 | Msa1424520:CDS | 55.0% | |
| TGTGCGCCAGCATTCAGACA+TGG | + | tig0025721:65679-65698 | None:intergenic | 55.0% | |
| ! | GGTGTTGGGAGGGACATACT+TGG | + | tig0025721:65703-65722 | None:intergenic | 55.0% |
| !! | AAGGCTTGGAGGTGTTGGGA+GGG | + | tig0025721:65713-65732 | None:intergenic | 55.0% |
| !! | AAAGGCTTGGAGGTGTTGGG+AGG | + | tig0025721:65714-65733 | None:intergenic | 55.0% |
| GACTTGACAAGGCCCGTGTA+GGG | + | tig0025721:65925-65944 | None:intergenic | 55.0% | |
| TGACTTGACAAGGCCCGTGT+AGG | + | tig0025721:65926-65945 | None:intergenic | 55.0% | |
| GTCATGGTACCAGTCATGGG+TGG | - | tig0025721:66671-66690 | Msa1424520:CDS | 55.0% | |
| CTCACAACTCCTGGAGTTGG+AGG | + | tig0025721:68605-68624 | None:intergenic | 55.0% | |
| ATTCCTCGGCTCACAACTCC+TGG | + | tig0025721:68614-68633 | None:intergenic | 55.0% | |
| GAGCCGAGGAATTGCATTGG+AGG | - | tig0025721:68622-68641 | Msa1424520:intron | 55.0% | |
| !! | TTGGCTGGTCTTTGGGGTTC+AGG | - | tig0025721:68659-68678 | Msa1424520:intron | 55.0% |
| !! | GGTCTTTGGGGTTCAGGTAC+CGG | - | tig0025721:68665-68684 | Msa1424520:intron | 55.0% |
| GGTGGCAAGTAGGAGAGTAG+TGG | - | tig0025721:68733-68752 | Msa1424520:intron | 55.0% | |
| AGGCCTGTGGAATGGAAGCA+AGG | + | tig0025721:68960-68979 | None:intergenic | 55.0% | |
| TGCTTCCATTCCACAGGCCT+TGG | - | tig0025721:68960-68979 | Msa1424520:intron | 55.0% | |
| TGGGCTCTTACCGTGGCATT+GGG | - | tig0025721:69006-69025 | Msa1424520:intron | 55.0% | |
| AGTCGATAGGCCCAATGCCA+CGG | + | tig0025721:69019-69038 | None:intergenic | 55.0% | |
| GTCGGCGTTGCATTGTTCCT+TGG | - | tig0025721:69081-69100 | Msa1424520:intron | 55.0% | |
| CTTATGCGGCAGCGTCAAGT+GGG | - | tig0025721:69175-69194 | Msa1424520:intron | 55.0% | |
| CTACTGGACAACACTGTCCC+GGG | - | tig0025721:69436-69455 | Msa1424520:CDS | 55.0% | |
| GAGAGCTGAAGACATTGCCG+CGG | - | tig0025721:69492-69511 | Msa1424520:CDS | 55.0% | |
| CCGTTGGCGCAACCACAACA+GGG | + | tig0025721:67716-67735 | None:intergenic | 60.0% | |
| CCCTGTTGTGGTTGCGCCAA+CGG | - | tig0025721:67713-67732 | Msa1424520:intron | 60.0% | |
| ACCGTTGGCGCAACCACAAC+AGG | + | tig0025721:67717-67736 | None:intergenic | 60.0% | |
| CGGCTCACAACTCCTGGAGT+TGG | + | tig0025721:68608-68627 | None:intergenic | 60.0% | |
| ACTCCAGGAGTTGTGAGCCG+AGG | - | tig0025721:68608-68627 | Msa1424520:intron | 60.0% | |
| AGCAGCCAAGGCCTGTGGAA+TGG | + | tig0025721:68968-68987 | None:intergenic | 60.0% | |
| ATAGCAGCAGCCAAGGCCTG+TGG | + | tig0025721:68973-68992 | None:intergenic | 60.0% | |
| GTGGGCTCTTACCGTGGCAT+TGG | - | tig0025721:69005-69024 | Msa1424520:intron | 60.0% | |
| CCACTTGACGCTGCCGCATA+AGG | + | tig0025721:69177-69196 | None:intergenic | 60.0% | |
| CCTTATGCGGCAGCGTCAAG+TGG | - | tig0025721:69174-69193 | Msa1424520:intron | 60.0% | |
| ! | AGATTGCAGCGAGGCATCCG+CGG | + | tig0025721:69512-69531 | None:intergenic | 60.0% |
| GCGCCAACGGTTGCTGCTGT+AGG | - | tig0025721:67726-67745 | Msa1424520:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025721 | gene | 64578 | 69851 | 64578 | ID=Msa1424520;Name=Msa1424520 |
| tig0025721 | mRNA | 64578 | 69851 | 64578 | ID=Msa1424520-mRNA-1;Parent=Msa1424520;Name=Msa1424520-mRNA-1;_AED=0.16;_eAED=0.17;_QI=0|0.88|0.9|1|1|1|10|269|679 |
| tig0025721 | exon | 64578 | 65056 | 64578 | ID=Msa1424520-mRNA-1:exon:3828;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 65208 | 65488 | 65208 | ID=Msa1424520-mRNA-1:exon:3827;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 65635 | 65869 | 65635 | ID=Msa1424520-mRNA-1:exon:3826;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 65974 | 66261 | 65974 | ID=Msa1424520-mRNA-1:exon:3825;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 66367 | 66417 | 66367 | ID=Msa1424520-mRNA-1:exon:3824;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 66590 | 66725 | 66590 | ID=Msa1424520-mRNA-1:exon:3823;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 67172 | 67272 | 67172 | ID=Msa1424520-mRNA-1:exon:3822;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 67467 | 67637 | 67467 | ID=Msa1424520-mRNA-1:exon:3821;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 67729 | 67826 | 67729 | ID=Msa1424520-mRNA-1:exon:3820;Parent=Msa1424520-mRNA-1 |
| tig0025721 | exon | 69383 | 69851 | 69383 | ID=Msa1424520-mRNA-1:exon:3819;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 69383 | 69851 | 69383 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 67729 | 67826 | 67729 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 67467 | 67637 | 67467 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 67172 | 67272 | 67172 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 66590 | 66725 | 66590 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 66367 | 66417 | 66367 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 65974 | 66261 | 65974 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 65635 | 65869 | 65635 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 65208 | 65488 | 65208 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | CDS | 64847 | 65056 | 64847 | ID=Msa1424520-mRNA-1:cds;Parent=Msa1424520-mRNA-1 |
| tig0025721 | three_prime_UTR | 64578 | 64846 | 64578 | ID=Msa1424520-mRNA-1:three_prime_utr;Parent=Msa1424520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
