Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431190 | XP_013465852.1 | 98.015 | 403 | 8 | 0 | 13 | 415 | 1 | 403 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431190 | sp|Q9SMZ3|FBX13_ARATH | 57.179 | 397 | 156 | 12 | 29 | 415 | 65 | 457 | 1.04e-144 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431190 | A0A072VEQ6 | 98.015 | 403 | 8 | 0 | 13 | 415 | 1 | 403 | 0.0 | 811 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005640 | Msa1431190 | 0.922299 | 1.177270e-88 | -8.615850e-47 |
| Msa0053990 | Msa1431190 | 0.856293 | 3.547637e-62 | -8.615850e-47 |
| Msa0096560 | Msa1431190 | 0.882977 | 6.624414e-71 | -8.615850e-47 |
| Msa0148460 | Msa1431190 | 0.820218 | 7.702085e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431190 | MtrunA17_Chr1g0150561 | 98.015 | 403 | 8 | 0 | 13 | 415 | 1 | 403 | 0.0 | 811 |
| Msa1431190 | MtrunA17_Chr3g0122401 | 25.258 | 388 | 241 | 13 | 33 | 413 | 118 | 463 | 3.72e-30 | 121 |
| Msa1431190 | MtrunA17_Chr8g0347881 | 25.304 | 411 | 236 | 18 | 29 | 414 | 39 | 403 | 2.98e-20 | 92.0 |
| Msa1431190 | MtrunA17_Chr1g0161891 | 22.192 | 365 | 221 | 11 | 32 | 390 | 19 | 326 | 5.19e-18 | 84.7 |
| Msa1431190 | MtrunA17_Chr8g0347851 | 25.441 | 397 | 238 | 19 | 34 | 414 | 44 | 398 | 5.90e-13 | 70.1 |
| Msa1431190 | MtrunA17_Chr1g0161871 | 26.201 | 229 | 137 | 8 | 32 | 242 | 30 | 244 | 2.77e-12 | 67.8 |
| Msa1431190 | MtrunA17_Chr7g0220421 | 22.506 | 391 | 243 | 12 | 34 | 415 | 98 | 437 | 3.89e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431190 | AT4G33160.1 | 57.179 | 397 | 156 | 12 | 29 | 415 | 65 | 457 | 1.06e-145 | 422 |
| Msa1431190 | AT4G33160.2 | 57.179 | 397 | 156 | 12 | 29 | 415 | 126 | 518 | 4.89e-145 | 423 |
| Msa1431190 | AT1G27340.1 | 24.528 | 371 | 228 | 12 | 32 | 394 | 118 | 444 | 2.44e-26 | 110 |
| Msa1431190 | AT3G61590.4 | 24.651 | 430 | 254 | 22 | 14 | 414 | 58 | 446 | 3.95e-12 | 68.2 |
| Msa1431190 | AT3G61590.2 | 23.953 | 430 | 257 | 20 | 14 | 414 | 30 | 418 | 6.57e-12 | 67.4 |
| Msa1431190 | AT3G61590.3 | 23.953 | 430 | 257 | 20 | 14 | 414 | 30 | 418 | 6.57e-12 | 67.4 |
| Msa1431190 | AT3G61590.1 | 24.651 | 430 | 254 | 22 | 14 | 414 | 22 | 410 | 6.81e-12 | 67.4 |
Find 90 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCAAAATGTTGCATTAA+TGG | 0.164880 | tig0026810:+33516 | Msa1431190:CDS |
| ATACAATCTTGTAGGATATT+TGG | 0.194528 | tig0026810:-32882 | None:intergenic |
| CAAACAGAAGCTTCTATTCT+TGG | 0.227716 | tig0026810:-33576 | None:intergenic |
| TCTTGGAAACCACAAGTCTT+AGG | 0.228546 | tig0026810:+33298 | Msa1431190:CDS |
| TCTCCATTAATGCAACATTT+TGG | 0.236954 | tig0026810:-33519 | None:intergenic |
| CACTTATGTTCTTTGTGATT+TGG | 0.296690 | tig0026810:+33473 | Msa1431190:CDS |
| ATTCCTGTTGCAGCTTCTAA+TGG | 0.302810 | tig0026810:+32715 | Msa1431190:CDS |
| CTAGCCGGATATCTTGGTTT+TGG | 0.307552 | tig0026810:+33612 | Msa1431190:three_prime_UTR |
| TGTTCTAAATTTCTGTTCAA+TGG | 0.332421 | tig0026810:+32369 | Msa1431190:CDS |
| ATTGTGTTGGTGCCGGTTCT+CGG | 0.340920 | tig0026810:+33418 | Msa1431190:CDS |
| GTAACCTTGTTCTCATTTAG+TGG | 0.345733 | tig0026810:+33830 | Msa1431190:three_prime_UTR |
| GTGATTTGGTAACCAACAAC+TGG | 0.347069 | tig0026810:+33487 | Msa1431190:CDS |
| CTGTCAACAATCAAATCATT+TGG | 0.364285 | tig0026810:-33773 | None:intergenic |
| ATAGACTTTAAACGAAAGAT+TGG | 0.375910 | tig0026810:-32923 | None:intergenic |
| GAAGACTAATACAATCTTGT+AGG | 0.389829 | tig0026810:-32890 | None:intergenic |
| TCATGCAACATAGCTAGATA+TGG | 0.407514 | tig0026810:+33743 | Msa1431190:three_prime_UTR |
| ATAACTCAAGCTCTTCTTGT+TGG | 0.420790 | tig0026810:+32944 | Msa1431190:CDS |
| TGTTGCAGCTTCTAATGGCC+TGG | 0.422631 | tig0026810:+32720 | Msa1431190:CDS |
| GAATAGAAGCTTCTGTTTGA+CGG | 0.426490 | tig0026810:+33580 | Msa1431190:CDS |
| TAACTCAAGCTCTTCTTGTT+GGG | 0.426988 | tig0026810:+32945 | Msa1431190:CDS |
| TACAAGATTGTATTAGTCTT+CGG | 0.428289 | tig0026810:+32892 | Msa1431190:CDS |
| GAAATTCAACGGAGGTAGTT+CGG | 0.429403 | tig0026810:-32803 | None:intergenic |
| AAACTATTGAATCCATTCTC+TGG | 0.430777 | tig0026810:-32415 | None:intergenic |
| CTTGGAAACCACAAGTCTTA+GGG | 0.431925 | tig0026810:+33299 | Msa1431190:CDS |
| TGAAGTTTCCTGACGAAGTT+CGG | 0.432189 | tig0026810:-32750 | None:intergenic |
| TGGGAAGACGAGAATGCTCT+TGG | 0.432787 | tig0026810:+32964 | Msa1431190:CDS |
| GTTTGCTACCGAACTTCGTC+AGG | 0.434074 | tig0026810:+32742 | Msa1431190:CDS |
| AGTGTTTCTTTGAGTACCCT+AGG | 0.452698 | tig0026810:+33196 | Msa1431190:CDS |
| AATGCCCTAGCCGGATATCT+TGG | 0.453017 | tig0026810:+33606 | Msa1431190:three_prime_UTR |
| AAAAGAAAGTCTCCAGAGAA+TGG | 0.455501 | tig0026810:+32403 | Msa1431190:CDS |
| ACATCCCCACAAGGGATCCT+TGG | 0.462778 | tig0026810:+32578 | Msa1431190:CDS |
| TGGCAATTCAACCCAGTTGT+TGG | 0.463420 | tig0026810:-33499 | None:intergenic |
| AGAAGATCCGGTCACAGGAT+TGG | 0.466882 | tig0026810:-32779 | None:intergenic |
| GAATCTTCGAGCAGAAGATT+CGG | 0.467832 | tig0026810:-32679 | None:intergenic |
| TAGACTTTAAACGAAAGATT+GGG | 0.470551 | tig0026810:-32922 | None:intergenic |
| TCGATGAGACCAACCGATGC+TGG | 0.476739 | tig0026810:+33331 | Msa1431190:CDS |
| TTACTTCCGTGTGCAAAAGA+TGG | 0.481747 | tig0026810:+32512 | Msa1431190:CDS |
| ATGACAGACTGGTTGAGATC+GGG | 0.482940 | tig0026810:-32616 | None:intergenic |
| GATATCAATTGTGTTGGTGC+CGG | 0.486697 | tig0026810:+33411 | Msa1431190:CDS |
| GTACTCAAAGAAACACTTGC+AGG | 0.487063 | tig0026810:-33190 | None:intergenic |
| TTGACTCGGCTGAAAACAGT+TGG | 0.492513 | tig0026810:+32641 | Msa1431190:CDS |
| ATAACCAAAACCAAGATATC+CGG | 0.496003 | tig0026810:-33616 | None:intergenic |
| GAATGAAGATGTCTTTGAAA+AGG | 0.497404 | tig0026810:+32453 | Msa1431190:CDS |
| GATGACAGACTGGTTGAGAT+CGG | 0.499005 | tig0026810:-32617 | None:intergenic |
| AGGCCATTAGAAGCTGCAAC+AGG | 0.501616 | tig0026810:-32718 | None:intergenic |
| GCACCAACACAATTGATATC+CGG | 0.505766 | tig0026810:-33408 | None:intergenic |
| AGGTAGTTCGGTAGAAGATC+CGG | 0.510241 | tig0026810:-32791 | None:intergenic |
| CGAGAATGCTCTTGGGAGGA+AGG | 0.510339 | tig0026810:+32972 | Msa1431190:CDS |
| ACCGACGAATATTGCTTGGT+TGG | 0.512080 | tig0026810:-33093 | None:intergenic |
| AATGACCGACGAATATTGCT+TGG | 0.513209 | tig0026810:-33097 | None:intergenic |
| GTGTACTTTCTGAGCAAGGC+TGG | 0.518608 | tig0026810:+33039 | Msa1431190:CDS |
| ATTGATATCGTCGAGTGTAA+CGG | 0.526717 | tig0026810:+33246 | Msa1431190:CDS |
| TCTTTGAAAAGGTACTTTCG+TGG | 0.527524 | tig0026810:+32464 | Msa1431190:CDS |
| ACGAAGTTCGGTAGCAAACC+AGG | 0.530457 | tig0026810:-32738 | None:intergenic |
| CAGCAGCAATGTCTCATGAA+TGG | 0.530978 | tig0026810:+33373 | Msa1431190:CDS |
| AGAACATAAGTGCATAGCTC+AGG | 0.532205 | tig0026810:-33462 | None:intergenic |
| TGTTTGCAATTGAGGTCTCA+AGG | 0.532935 | tig0026810:+32040 | Msa1431190:intron |
| GGGAAGACGAGAATGCTCTT+GGG | 0.541458 | tig0026810:+32965 | Msa1431190:CDS |
| CTGCAATCTGTTGCCAGCAT+CGG | 0.543898 | tig0026810:-33344 | None:intergenic |
| TTGCATTAATGGAGAAGTCA+TGG | 0.546480 | tig0026810:+33527 | Msa1431190:CDS |
| TGACGGTGAAATGCCCTAGC+CGG | 0.554753 | tig0026810:+33597 | Msa1431190:exon |
| AATCTGTTGCCAGCATCGGT+TGG | 0.557369 | tig0026810:-33340 | None:intergenic |
| CCAGTCTGTCATCTTTGACT+CGG | 0.557680 | tig0026810:+32627 | Msa1431190:CDS |
| CAAAACCAAGATATCCGGCT+AGG | 0.558173 | tig0026810:-33611 | None:intergenic |
| TCGGTAGAAGATCCGGTCAC+AGG | 0.558565 | tig0026810:-32784 | None:intergenic |
| ATTGTGTCCAATCCTGTGAC+CGG | 0.560669 | tig0026810:+32772 | Msa1431190:CDS |
| CATTCATGAGACATTGCTGC+TGG | 0.561199 | tig0026810:-33372 | None:intergenic |
| AAACCACAAGTCTTAGGGTG+TGG | 0.562665 | tig0026810:+33304 | Msa1431190:CDS |
| ATTGCAAGCTACAACGGTCC+CGG | 0.576687 | tig0026810:-33163 | None:intergenic |
| CTTGCTCACACATCCCCACA+AGG | 0.585521 | tig0026810:+32569 | Msa1431190:CDS |
| AGACGAAAGAAACTCGAAGT+AGG | 0.593990 | tig0026810:-32490 | None:intergenic |
| TGAATGGTACAGAAAGAAGC+CGG | 0.596645 | tig0026810:+33389 | Msa1431190:CDS |
| TCTGAGCAAGGCTGGAAATG+TGG | 0.601419 | tig0026810:+33047 | Msa1431190:CDS |
| AAGCCGGATATCAATTGTGT+TGG | 0.603699 | tig0026810:+33405 | Msa1431190:CDS |
| AAAACCAAGATATCCGGCTA+GGG | 0.604515 | tig0026810:-33610 | None:intergenic |
| CCGAGTCAAAGATGACAGAC+TGG | 0.609122 | tig0026810:-32627 | None:intergenic |
| AGAAGTCATGGAGTTTATGT+CGG | 0.612236 | tig0026810:+33539 | Msa1431190:CDS |
| AAAGTACACAACATTGTCAT+CGG | 0.617043 | tig0026810:-33025 | None:intergenic |
| TCTCCACACCCTAAGACTTG+TGG | 0.621668 | tig0026810:-33307 | None:intergenic |
| TACTAACAAAGACGGTCAAG+AGG | 0.624609 | tig0026810:+33119 | Msa1431190:CDS |
| TGTTGTGTACTTTCTGAGCA+AGG | 0.626293 | tig0026810:+33035 | Msa1431190:CDS |
| TCCAACCAAGCAATATTCGT+CGG | 0.630854 | tig0026810:+33092 | Msa1431190:CDS |
| GGTCAAATTGCAAGCTACAA+CGG | 0.643110 | tig0026810:-33169 | None:intergenic |
| AAGACGAGAATGCTCTTGGG+AGG | 0.645387 | tig0026810:+32968 | Msa1431190:CDS |
| AAAACCAAGGATCCCTTGTG+GGG | 0.654526 | tig0026810:-32582 | None:intergenic |
| AATACCACTAAATGAGAACA+AGG | 0.660886 | tig0026810:-33834 | None:intergenic |
| TGATTTGGTAACCAACAACT+GGG | 0.681708 | tig0026810:+33488 | Msa1431190:CDS |
| TCGGTCATTACTAACAAAGA+CGG | 0.685648 | tig0026810:+33111 | Msa1431190:CDS |
| TTGCTCACACATCCCCACAA+GGG | 0.708158 | tig0026810:+32570 | Msa1431190:CDS |
| TCTGAGGCGAAATTCAACGG+AGG | 0.746256 | tig0026810:-32811 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATAACAAAAAAAATTAA+AGG | - | tig0026810:32142-32161 | None:intergenic | 10.0% |
| !!! | ATTTTTATACTGAAATTAAA+AGG | + | tig0026810:32180-32199 | Msa1431190:intron | 10.0% |
| !!! | TTTTTATACTGAAATTAAAA+GGG | + | tig0026810:32181-32200 | Msa1431190:intron | 10.0% |
| !!! | TTGATAACAAAAAAAATTAA+AGG | - | tig0026810:32142-32161 | None:intergenic | 10.0% |
| !!! | ATTTTTATACTGAAATTAAA+AGG | + | tig0026810:32180-32199 | Msa1431190:intron | 10.0% |
| !!! | TTTTTATACTGAAATTAAAA+GGG | + | tig0026810:32181-32200 | Msa1431190:intron | 10.0% |
| !!! | TTTTATACTGAAATTAAAAG+GGG | + | tig0026810:32182-32201 | Msa1431190:intron | 15.0% |
| !!! | AAAATTGATTTTTTTGTTGT+TGG | + | tig0026810:32310-32329 | Msa1431190:intron | 15.0% |
| !!! | TTTTATACTGAAATTAAAAG+GGG | + | tig0026810:32182-32201 | Msa1431190:intron | 15.0% |
| !!! | AAAATTGATTTTTTTGTTGT+TGG | + | tig0026810:32310-32329 | Msa1431190:intron | 15.0% |
| !! | CATTAACATATCATGAAAAA+GGG | - | tig0026810:32250-32269 | None:intergenic | 20.0% |
| !! | ACATTAACATATCATGAAAA+AGG | - | tig0026810:32251-32270 | None:intergenic | 20.0% |
| !! | CATTAACATATCATGAAAAA+GGG | - | tig0026810:32250-32269 | None:intergenic | 20.0% |
| !! | ACATTAACATATCATGAAAA+AGG | - | tig0026810:32251-32270 | None:intergenic | 20.0% |
| !!! | TTTTTACTAGTTCTTGTTTG+AGG | + | tig0026810:31985-32004 | Msa1431190:intron | 25.0% |
| !!! | TTTTACTAGTTCTTGTTTGA+GGG | + | tig0026810:31986-32005 | Msa1431190:intron | 25.0% |
| !!! | GAAAGTTTTGAACTTTTTCA+TGG | + | tig0026810:32220-32239 | Msa1431190:intron | 25.0% |
| !! | TGTTCTAAATTTCTGTTCAA+TGG | + | tig0026810:32369-32388 | Msa1431190:CDS | 25.0% |
| !! | ATGAGTACTACATCTTTTAA+TGG | + | tig0026810:32859-32878 | Msa1431190:CDS | 25.0% |
| ! | ATACAATCTTGTAGGATATT+TGG | - | tig0026810:32885-32904 | None:intergenic | 25.0% |
| !!! | TACAAGATTGTATTAGTCTT+CGG | + | tig0026810:32892-32911 | Msa1431190:CDS | 25.0% |
| ! | TAGACTTTAAACGAAAGATT+GGG | - | tig0026810:32925-32944 | None:intergenic | 25.0% |
| ! | ATAGACTTTAAACGAAAGAT+TGG | - | tig0026810:32926-32945 | None:intergenic | 25.0% |
| !!! | CGTTTTATTATCAGAATTCT+TGG | + | tig0026810:33281-33300 | Msa1431190:CDS | 25.0% |
| ! | GCTAACAGAACATTAAAAAA+TGG | - | tig0026810:33684-33703 | None:intergenic | 25.0% |
| !!! | TTTTTACTAGTTCTTGTTTG+AGG | + | tig0026810:31985-32004 | Msa1431190:intron | 25.0% |
| !!! | TTTTACTAGTTCTTGTTTGA+GGG | + | tig0026810:31986-32005 | Msa1431190:intron | 25.0% |
| !!! | GAAAGTTTTGAACTTTTTCA+TGG | + | tig0026810:32220-32239 | Msa1431190:intron | 25.0% |
| !! | TGTTCTAAATTTCTGTTCAA+TGG | + | tig0026810:32369-32388 | Msa1431190:CDS | 25.0% |
| !! | ATGAGTACTACATCTTTTAA+TGG | + | tig0026810:32859-32878 | Msa1431190:CDS | 25.0% |
| ! | ATACAATCTTGTAGGATATT+TGG | - | tig0026810:32885-32904 | None:intergenic | 25.0% |
| !!! | TACAAGATTGTATTAGTCTT+CGG | + | tig0026810:32892-32911 | Msa1431190:CDS | 25.0% |
| ! | TAGACTTTAAACGAAAGATT+GGG | - | tig0026810:32925-32944 | None:intergenic | 25.0% |
| ! | ATAGACTTTAAACGAAAGAT+TGG | - | tig0026810:32926-32945 | None:intergenic | 25.0% |
| !!! | CGTTTTATTATCAGAATTCT+TGG | + | tig0026810:33281-33300 | Msa1431190:CDS | 25.0% |
| ! | GCTAACAGAACATTAAAAAA+TGG | - | tig0026810:33684-33703 | None:intergenic | 25.0% |
| TTTGAGGGTTTGTAGTAAAA+GGG | + | tig0026810:32001-32020 | Msa1431190:intron | 30.0% | |
| TTGATTACTGTTTGCAATTG+AGG | + | tig0026810:32032-32051 | Msa1431190:intron | 30.0% | |
| AATAGCTTCTTAAGCTAAGA+GGG | + | tig0026810:32089-32108 | Msa1431190:intron | 30.0% | |
| ATACTGAAATTAAAAGGGGT+TGG | + | tig0026810:32186-32205 | Msa1431190:intron | 30.0% | |
| AAACTATTGAATCCATTCTC+TGG | - | tig0026810:32418-32437 | None:intergenic | 30.0% | |
| ! | TGGATTCAATAGTTTTTCAC+TGG | + | tig0026810:32423-32442 | Msa1431190:CDS | 30.0% |
| ! | GAATGAAGATGTCTTTGAAA+AGG | + | tig0026810:32453-32472 | Msa1431190:CDS | 30.0% |
| !! | ATTGAGAGATTGATTTTCTG+AGG | - | tig0026810:32830-32849 | None:intergenic | 30.0% |
| GAAGACTAATACAATCTTGT+AGG | - | tig0026810:32893-32912 | None:intergenic | 30.0% | |
| AAAGTACACAACATTGTCAT+CGG | - | tig0026810:33028-33047 | None:intergenic | 30.0% | |
| ! | ATAGAGTATTCGCAAAAAAC+TGG | - | tig0026810:33228-33247 | None:intergenic | 30.0% |
| CACTTATGTTCTTTGTGATT+TGG | + | tig0026810:33473-33492 | Msa1431190:CDS | 30.0% | |
| TTGCCAAAATGTTGCATTAA+TGG | + | tig0026810:33516-33535 | Msa1431190:CDS | 30.0% | |
| ! | TCTCCATTAATGCAACATTT+TGG | - | tig0026810:33522-33541 | None:intergenic | 30.0% |
| ATAACCAAAACCAAGATATC+CGG | - | tig0026810:33619-33638 | None:intergenic | 30.0% | |
| CTGTCAACAATCAAATCATT+TGG | - | tig0026810:33776-33795 | None:intergenic | 30.0% | |
| TTTGAGGGTTTGTAGTAAAA+GGG | + | tig0026810:32001-32020 | Msa1431190:intron | 30.0% | |
| TTGATTACTGTTTGCAATTG+AGG | + | tig0026810:32032-32051 | Msa1431190:intron | 30.0% | |
| AATAGCTTCTTAAGCTAAGA+GGG | + | tig0026810:32089-32108 | Msa1431190:intron | 30.0% | |
| ATACTGAAATTAAAAGGGGT+TGG | + | tig0026810:32186-32205 | Msa1431190:intron | 30.0% | |
| AAACTATTGAATCCATTCTC+TGG | - | tig0026810:32418-32437 | None:intergenic | 30.0% | |
| ! | TGGATTCAATAGTTTTTCAC+TGG | + | tig0026810:32423-32442 | Msa1431190:CDS | 30.0% |
| ! | GAATGAAGATGTCTTTGAAA+AGG | + | tig0026810:32453-32472 | Msa1431190:CDS | 30.0% |
| !! | ATTGAGAGATTGATTTTCTG+AGG | - | tig0026810:32830-32849 | None:intergenic | 30.0% |
| GAAGACTAATACAATCTTGT+AGG | - | tig0026810:32893-32912 | None:intergenic | 30.0% | |
| AAAGTACACAACATTGTCAT+CGG | - | tig0026810:33028-33047 | None:intergenic | 30.0% | |
| ! | ATAGAGTATTCGCAAAAAAC+TGG | - | tig0026810:33228-33247 | None:intergenic | 30.0% |
| CACTTATGTTCTTTGTGATT+TGG | + | tig0026810:33473-33492 | Msa1431190:CDS | 30.0% | |
| TTGCCAAAATGTTGCATTAA+TGG | + | tig0026810:33516-33535 | Msa1431190:CDS | 30.0% | |
| ! | TCTCCATTAATGCAACATTT+TGG | - | tig0026810:33522-33541 | None:intergenic | 30.0% |
| ATAACCAAAACCAAGATATC+CGG | - | tig0026810:33619-33638 | None:intergenic | 30.0% | |
| CTGTCAACAATCAAATCATT+TGG | - | tig0026810:33776-33795 | None:intergenic | 30.0% | |
| GTTTGAGGGTTTGTAGTAAA+AGG | + | tig0026810:32000-32019 | Msa1431190:intron | 35.0% | |
| TTGAGGGTTTGTAGTAAAAG+GGG | + | tig0026810:32002-32021 | Msa1431190:intron | 35.0% | |
| GAATAGCTTCTTAAGCTAAG+AGG | + | tig0026810:32088-32107 | Msa1431190:intron | 35.0% | |
| AAAAGAAAGTCTCCAGAGAA+TGG | + | tig0026810:32403-32422 | Msa1431190:CDS | 35.0% | |
| !! | TCTTTGAAAAGGTACTTTCG+TGG | + | tig0026810:32464-32483 | Msa1431190:CDS | 35.0% |
| ! | TGATTTCCATCTTTTGCACA+CGG | - | tig0026810:32521-32540 | None:intergenic | 35.0% |
| ! | AACAGGAATGCAACTTTTGT+TGG | - | tig0026810:32704-32723 | None:intergenic | 35.0% |
| !!! | TTTTCTGAGGCGAAATTCAA+CGG | - | tig0026810:32817-32836 | None:intergenic | 35.0% |
| ATAACTCAAGCTCTTCTTGT+TGG | + | tig0026810:32944-32963 | Msa1431190:CDS | 35.0% | |
| TAACTCAAGCTCTTCTTGTT+GGG | + | tig0026810:32945-32964 | Msa1431190:CDS | 35.0% | |
| TCGGTCATTACTAACAAAGA+CGG | + | tig0026810:33111-33130 | Msa1431190:CDS | 35.0% | |
| !!! | GTCTATTTTTTGAGTTCGTC+CGG | + | tig0026810:33144-33163 | Msa1431190:CDS | 35.0% |
| !!! | TCTATTTTTTGAGTTCGTCC+GGG | + | tig0026810:33145-33164 | Msa1431190:CDS | 35.0% |
| AAAAAACTGGCAACAACCTA+GGG | - | tig0026810:33215-33234 | None:intergenic | 35.0% | |
| ATTGATATCGTCGAGTGTAA+CGG | + | tig0026810:33246-33265 | Msa1431190:CDS | 35.0% | |
| GCATATAAAAATCCGAGAAC+CGG | - | tig0026810:33433-33452 | None:intergenic | 35.0% | |
| !! | TGATTTGGTAACCAACAACT+GGG | + | tig0026810:33488-33507 | Msa1431190:CDS | 35.0% |
| TTGCATTAATGGAGAAGTCA+TGG | + | tig0026810:33527-33546 | Msa1431190:CDS | 35.0% | |
| AGAAGTCATGGAGTTTATGT+CGG | + | tig0026810:33539-33558 | Msa1431190:CDS | 35.0% | |
| CAAACAGAAGCTTCTATTCT+TGG | - | tig0026810:33579-33598 | None:intergenic | 35.0% | |
| GAATAGAAGCTTCTGTTTGA+CGG | + | tig0026810:33580-33599 | Msa1431190:CDS | 35.0% | |
| TCATGCAACATAGCTAGATA+TGG | + | tig0026810:33743-33762 | Msa1431190:three_prime_UTR | 35.0% | |
| GTAACCTTGTTCTCATTTAG+TGG | + | tig0026810:33830-33849 | Msa1431190:three_prime_UTR | 35.0% | |
| GTTTGAGGGTTTGTAGTAAA+AGG | + | tig0026810:32000-32019 | Msa1431190:intron | 35.0% | |
| TTGAGGGTTTGTAGTAAAAG+GGG | + | tig0026810:32002-32021 | Msa1431190:intron | 35.0% | |
| GAATAGCTTCTTAAGCTAAG+AGG | + | tig0026810:32088-32107 | Msa1431190:intron | 35.0% | |
| AAAAGAAAGTCTCCAGAGAA+TGG | + | tig0026810:32403-32422 | Msa1431190:CDS | 35.0% | |
| !! | TCTTTGAAAAGGTACTTTCG+TGG | + | tig0026810:32464-32483 | Msa1431190:CDS | 35.0% |
| ! | TGATTTCCATCTTTTGCACA+CGG | - | tig0026810:32521-32540 | None:intergenic | 35.0% |
| ! | AACAGGAATGCAACTTTTGT+TGG | - | tig0026810:32704-32723 | None:intergenic | 35.0% |
| !!! | TTTTCTGAGGCGAAATTCAA+CGG | - | tig0026810:32817-32836 | None:intergenic | 35.0% |
| ATAACTCAAGCTCTTCTTGT+TGG | + | tig0026810:32944-32963 | Msa1431190:CDS | 35.0% | |
| TAACTCAAGCTCTTCTTGTT+GGG | + | tig0026810:32945-32964 | Msa1431190:CDS | 35.0% | |
| TCGGTCATTACTAACAAAGA+CGG | + | tig0026810:33111-33130 | Msa1431190:CDS | 35.0% | |
| !!! | GTCTATTTTTTGAGTTCGTC+CGG | + | tig0026810:33144-33163 | Msa1431190:CDS | 35.0% |
| !!! | TCTATTTTTTGAGTTCGTCC+GGG | + | tig0026810:33145-33164 | Msa1431190:CDS | 35.0% |
| AAAAAACTGGCAACAACCTA+GGG | - | tig0026810:33215-33234 | None:intergenic | 35.0% | |
| ATTGATATCGTCGAGTGTAA+CGG | + | tig0026810:33246-33265 | Msa1431190:CDS | 35.0% | |
| GCATATAAAAATCCGAGAAC+CGG | - | tig0026810:33433-33452 | None:intergenic | 35.0% | |
| !! | TGATTTGGTAACCAACAACT+GGG | + | tig0026810:33488-33507 | Msa1431190:CDS | 35.0% |
| TTGCATTAATGGAGAAGTCA+TGG | + | tig0026810:33527-33546 | Msa1431190:CDS | 35.0% | |
| AGAAGTCATGGAGTTTATGT+CGG | + | tig0026810:33539-33558 | Msa1431190:CDS | 35.0% | |
| CAAACAGAAGCTTCTATTCT+TGG | - | tig0026810:33579-33598 | None:intergenic | 35.0% | |
| GAATAGAAGCTTCTGTTTGA+CGG | + | tig0026810:33580-33599 | Msa1431190:CDS | 35.0% | |
| TCATGCAACATAGCTAGATA+TGG | + | tig0026810:33743-33762 | Msa1431190:three_prime_UTR | 35.0% | |
| TGTTTGCAATTGAGGTCTCA+AGG | + | tig0026810:32040-32059 | Msa1431190:intron | 40.0% | |
| TAAAAGGGGTTGGAGAATGA+AGG | + | tig0026810:32196-32215 | Msa1431190:intron | 40.0% | |
| AAAAGGGGTTGGAGAATGAA+GGG | + | tig0026810:32197-32216 | Msa1431190:intron | 40.0% | |
| AGACGAAAGAAACTCGAAGT+AGG | - | tig0026810:32493-32512 | None:intergenic | 40.0% | |
| TTACTTCCGTGTGCAAAAGA+TGG | + | tig0026810:32512-32531 | Msa1431190:CDS | 40.0% | |
| AAAAACCAAGGATCCCTTGT+GGG | - | tig0026810:32586-32605 | None:intergenic | 40.0% | |
| !! | AAGGGATCCTTGGTTTTTCA+TGG | + | tig0026810:32588-32607 | Msa1431190:CDS | 40.0% |
| GAATCTTCGAGCAGAAGATT+CGG | - | tig0026810:32682-32701 | None:intergenic | 40.0% | |
| ATTCCTGTTGCAGCTTCTAA+TGG | + | tig0026810:32715-32734 | Msa1431190:CDS | 40.0% | |
| TGAAGTTTCCTGACGAAGTT+CGG | - | tig0026810:32753-32772 | None:intergenic | 40.0% | |
| GAAATTCAACGGAGGTAGTT+CGG | - | tig0026810:32806-32825 | None:intergenic | 40.0% | |
| TGTTGTGTACTTTCTGAGCA+AGG | + | tig0026810:33035-33054 | Msa1431190:CDS | 40.0% | |
| TCCAACCAAGCAATATTCGT+CGG | + | tig0026810:33092-33111 | Msa1431190:CDS | 40.0% | |
| AATGACCGACGAATATTGCT+TGG | - | tig0026810:33100-33119 | None:intergenic | 40.0% | |
| TACTAACAAAGACGGTCAAG+AGG | + | tig0026810:33119-33138 | Msa1431190:CDS | 40.0% | |
| GGTCAAATTGCAAGCTACAA+CGG | - | tig0026810:33172-33191 | None:intergenic | 40.0% | |
| GTACTCAAAGAAACACTTGC+AGG | - | tig0026810:33193-33212 | None:intergenic | 40.0% | |
| AGTGTTTCTTTGAGTACCCT+AGG | + | tig0026810:33196-33215 | Msa1431190:CDS | 40.0% | |
| CAAAAAACTGGCAACAACCT+AGG | - | tig0026810:33216-33235 | None:intergenic | 40.0% | |
| TCTTGGAAACCACAAGTCTT+AGG | + | tig0026810:33298-33317 | Msa1431190:CDS | 40.0% | |
| CTTGGAAACCACAAGTCTTA+GGG | + | tig0026810:33299-33318 | Msa1431190:CDS | 40.0% | |
| TGAATGGTACAGAAAGAAGC+CGG | + | tig0026810:33389-33408 | Msa1431190:CDS | 40.0% | |
| AAGCCGGATATCAATTGTGT+TGG | + | tig0026810:33405-33424 | Msa1431190:CDS | 40.0% | |
| GCACCAACACAATTGATATC+CGG | - | tig0026810:33411-33430 | None:intergenic | 40.0% | |
| ! | GATATCAATTGTGTTGGTGC+CGG | + | tig0026810:33411-33430 | Msa1431190:CDS | 40.0% |
| AGAACATAAGTGCATAGCTC+AGG | - | tig0026810:33465-33484 | None:intergenic | 40.0% | |
| !! | GTGATTTGGTAACCAACAAC+TGG | + | tig0026810:33487-33506 | Msa1431190:CDS | 40.0% |
| AAAACCAAGATATCCGGCTA+GGG | - | tig0026810:33613-33632 | None:intergenic | 40.0% | |
| TGTTTGCAATTGAGGTCTCA+AGG | + | tig0026810:32040-32059 | Msa1431190:intron | 40.0% | |
| TAAAAGGGGTTGGAGAATGA+AGG | + | tig0026810:32196-32215 | Msa1431190:intron | 40.0% | |
| AAAAGGGGTTGGAGAATGAA+GGG | + | tig0026810:32197-32216 | Msa1431190:intron | 40.0% | |
| AGACGAAAGAAACTCGAAGT+AGG | - | tig0026810:32493-32512 | None:intergenic | 40.0% | |
| TTACTTCCGTGTGCAAAAGA+TGG | + | tig0026810:32512-32531 | Msa1431190:CDS | 40.0% | |
| AAAAACCAAGGATCCCTTGT+GGG | - | tig0026810:32586-32605 | None:intergenic | 40.0% | |
| !! | AAGGGATCCTTGGTTTTTCA+TGG | + | tig0026810:32588-32607 | Msa1431190:CDS | 40.0% |
| GAATCTTCGAGCAGAAGATT+CGG | - | tig0026810:32682-32701 | None:intergenic | 40.0% | |
| ATTCCTGTTGCAGCTTCTAA+TGG | + | tig0026810:32715-32734 | Msa1431190:CDS | 40.0% | |
| TGAAGTTTCCTGACGAAGTT+CGG | - | tig0026810:32753-32772 | None:intergenic | 40.0% | |
| GAAATTCAACGGAGGTAGTT+CGG | - | tig0026810:32806-32825 | None:intergenic | 40.0% | |
| TGTTGTGTACTTTCTGAGCA+AGG | + | tig0026810:33035-33054 | Msa1431190:CDS | 40.0% | |
| TCCAACCAAGCAATATTCGT+CGG | + | tig0026810:33092-33111 | Msa1431190:CDS | 40.0% | |
| AATGACCGACGAATATTGCT+TGG | - | tig0026810:33100-33119 | None:intergenic | 40.0% | |
| TACTAACAAAGACGGTCAAG+AGG | + | tig0026810:33119-33138 | Msa1431190:CDS | 40.0% | |
| GGTCAAATTGCAAGCTACAA+CGG | - | tig0026810:33172-33191 | None:intergenic | 40.0% | |
| GTACTCAAAGAAACACTTGC+AGG | - | tig0026810:33193-33212 | None:intergenic | 40.0% | |
| AGTGTTTCTTTGAGTACCCT+AGG | + | tig0026810:33196-33215 | Msa1431190:CDS | 40.0% | |
| CAAAAAACTGGCAACAACCT+AGG | - | tig0026810:33216-33235 | None:intergenic | 40.0% | |
| TCTTGGAAACCACAAGTCTT+AGG | + | tig0026810:33298-33317 | Msa1431190:CDS | 40.0% | |
| CTTGGAAACCACAAGTCTTA+GGG | + | tig0026810:33299-33318 | Msa1431190:CDS | 40.0% | |
| TGAATGGTACAGAAAGAAGC+CGG | + | tig0026810:33389-33408 | Msa1431190:CDS | 40.0% | |
| AAGCCGGATATCAATTGTGT+TGG | + | tig0026810:33405-33424 | Msa1431190:CDS | 40.0% | |
| GCACCAACACAATTGATATC+CGG | - | tig0026810:33411-33430 | None:intergenic | 40.0% | |
| ! | GATATCAATTGTGTTGGTGC+CGG | + | tig0026810:33411-33430 | Msa1431190:CDS | 40.0% |
| AGAACATAAGTGCATAGCTC+AGG | - | tig0026810:33465-33484 | None:intergenic | 40.0% | |
| !! | GTGATTTGGTAACCAACAAC+TGG | + | tig0026810:33487-33506 | Msa1431190:CDS | 40.0% |
| AAAACCAAGATATCCGGCTA+GGG | - | tig0026810:33613-33632 | None:intergenic | 40.0% | |
| AAAGGGGTTGGAGAATGAAG+GGG | + | tig0026810:32198-32217 | Msa1431190:intron | 45.0% | |
| AAAACCAAGGATCCCTTGTG+GGG | - | tig0026810:32585-32604 | None:intergenic | 45.0% | |
| GAAAAACCAAGGATCCCTTG+TGG | - | tig0026810:32587-32606 | None:intergenic | 45.0% | |
| GGAGCAACCATGAAAAACCA+AGG | - | tig0026810:32598-32617 | None:intergenic | 45.0% | |
| ! | ATGACAGACTGGTTGAGATC+GGG | - | tig0026810:32619-32638 | None:intergenic | 45.0% |
| ! | GATGACAGACTGGTTGAGAT+CGG | - | tig0026810:32620-32639 | None:intergenic | 45.0% |
| CCAGTCTGTCATCTTTGACT+CGG | + | tig0026810:32627-32646 | Msa1431190:CDS | 45.0% | |
| !! | TTGACTCGGCTGAAAACAGT+TGG | + | tig0026810:32641-32660 | Msa1431190:CDS | 45.0% |
| ATTGTGTCCAATCCTGTGAC+CGG | + | tig0026810:32772-32791 | Msa1431190:CDS | 45.0% | |
| AGGTAGTTCGGTAGAAGATC+CGG | - | tig0026810:32794-32813 | None:intergenic | 45.0% | |
| ACCGACGAATATTGCTTGGT+TGG | - | tig0026810:33096-33115 | None:intergenic | 45.0% | |
| AAACCACAAGTCTTAGGGTG+TGG | + | tig0026810:33304-33323 | Msa1431190:CDS | 45.0% | |
| CATTCATGAGACATTGCTGC+TGG | - | tig0026810:33375-33394 | None:intergenic | 45.0% | |
| CAGCAGCAATGTCTCATGAA+TGG | + | tig0026810:33373-33392 | Msa1431190:CDS | 45.0% | |
| TGGCAATTCAACCCAGTTGT+TGG | - | tig0026810:33502-33521 | None:intergenic | 45.0% | |
| CAAAACCAAGATATCCGGCT+AGG | - | tig0026810:33614-33633 | None:intergenic | 45.0% | |
| ! | CTAGCCGGATATCTTGGTTT+TGG | + | tig0026810:33612-33631 | Msa1431190:three_prime_UTR | 45.0% |
| AAAGGGGTTGGAGAATGAAG+GGG | + | tig0026810:32198-32217 | Msa1431190:intron | 45.0% | |
| AAAACCAAGGATCCCTTGTG+GGG | - | tig0026810:32585-32604 | None:intergenic | 45.0% | |
| GAAAAACCAAGGATCCCTTG+TGG | - | tig0026810:32587-32606 | None:intergenic | 45.0% | |
| GGAGCAACCATGAAAAACCA+AGG | - | tig0026810:32598-32617 | None:intergenic | 45.0% | |
| ! | ATGACAGACTGGTTGAGATC+GGG | - | tig0026810:32619-32638 | None:intergenic | 45.0% |
| ! | GATGACAGACTGGTTGAGAT+CGG | - | tig0026810:32620-32639 | None:intergenic | 45.0% |
| CCAGTCTGTCATCTTTGACT+CGG | + | tig0026810:32627-32646 | Msa1431190:CDS | 45.0% | |
| !! | TTGACTCGGCTGAAAACAGT+TGG | + | tig0026810:32641-32660 | Msa1431190:CDS | 45.0% |
| ATTGTGTCCAATCCTGTGAC+CGG | + | tig0026810:32772-32791 | Msa1431190:CDS | 45.0% | |
| AGGTAGTTCGGTAGAAGATC+CGG | - | tig0026810:32794-32813 | None:intergenic | 45.0% | |
| ACCGACGAATATTGCTTGGT+TGG | - | tig0026810:33096-33115 | None:intergenic | 45.0% | |
| AAACCACAAGTCTTAGGGTG+TGG | + | tig0026810:33304-33323 | Msa1431190:CDS | 45.0% | |
| CATTCATGAGACATTGCTGC+TGG | - | tig0026810:33375-33394 | None:intergenic | 45.0% | |
| CAGCAGCAATGTCTCATGAA+TGG | + | tig0026810:33373-33392 | Msa1431190:CDS | 45.0% | |
| TGGCAATTCAACCCAGTTGT+TGG | - | tig0026810:33502-33521 | None:intergenic | 45.0% | |
| CAAAACCAAGATATCCGGCT+AGG | - | tig0026810:33614-33633 | None:intergenic | 45.0% | |
| ! | CTAGCCGGATATCTTGGTTT+TGG | + | tig0026810:33612-33631 | Msa1431190:three_prime_UTR | 45.0% |
| !! | AAAAAAAATAACATAAAAAA+TGG | - | tig0026810:33645-33664 | None:intergenic | 5.0% |
| !! | AAAAAAAATAACATAAAAAA+TGG | - | tig0026810:33645-33664 | None:intergenic | 5.0% |
| TTGCTCACACATCCCCACAA+GGG | + | tig0026810:32570-32589 | Msa1431190:CDS | 50.0% | |
| CCGAGTCAAAGATGACAGAC+TGG | - | tig0026810:32630-32649 | None:intergenic | 50.0% | |
| AGGCCATTAGAAGCTGCAAC+AGG | - | tig0026810:32721-32740 | None:intergenic | 50.0% | |
| TGTTGCAGCTTCTAATGGCC+TGG | + | tig0026810:32720-32739 | Msa1431190:CDS | 50.0% | |
| ACGAAGTTCGGTAGCAAACC+AGG | - | tig0026810:32741-32760 | None:intergenic | 50.0% | |
| ! | GTTTGCTACCGAACTTCGTC+AGG | + | tig0026810:32742-32761 | Msa1431190:CDS | 50.0% |
| AGAAGATCCGGTCACAGGAT+TGG | - | tig0026810:32782-32801 | None:intergenic | 50.0% | |
| ! | TCTGAGGCGAAATTCAACGG+AGG | - | tig0026810:32814-32833 | None:intergenic | 50.0% |
| TGGGAAGACGAGAATGCTCT+TGG | + | tig0026810:32964-32983 | Msa1431190:CDS | 50.0% | |
| GGGAAGACGAGAATGCTCTT+GGG | + | tig0026810:32965-32984 | Msa1431190:CDS | 50.0% | |
| AAGACGAGAATGCTCTTGGG+AGG | + | tig0026810:32968-32987 | Msa1431190:CDS | 50.0% | |
| GTGTACTTTCTGAGCAAGGC+TGG | + | tig0026810:33039-33058 | Msa1431190:CDS | 50.0% | |
| TCTGAGCAAGGCTGGAAATG+TGG | + | tig0026810:33047-33066 | Msa1431190:CDS | 50.0% | |
| ATTGCAAGCTACAACGGTCC+CGG | - | tig0026810:33166-33185 | None:intergenic | 50.0% | |
| TCTCCACACCCTAAGACTTG+TGG | - | tig0026810:33310-33329 | None:intergenic | 50.0% | |
| !! | AATCTGTTGCCAGCATCGGT+TGG | - | tig0026810:33343-33362 | None:intergenic | 50.0% |
| CTGCAATCTGTTGCCAGCAT+CGG | - | tig0026810:33347-33366 | None:intergenic | 50.0% | |
| !! | ATTGTGTTGGTGCCGGTTCT+CGG | + | tig0026810:33418-33437 | Msa1431190:CDS | 50.0% |
| AATGCCCTAGCCGGATATCT+TGG | + | tig0026810:33606-33625 | Msa1431190:three_prime_UTR | 50.0% | |
| TTGCTCACACATCCCCACAA+GGG | + | tig0026810:32570-32589 | Msa1431190:CDS | 50.0% | |
| CCGAGTCAAAGATGACAGAC+TGG | - | tig0026810:32630-32649 | None:intergenic | 50.0% | |
| AGGCCATTAGAAGCTGCAAC+AGG | - | tig0026810:32721-32740 | None:intergenic | 50.0% | |
| TGTTGCAGCTTCTAATGGCC+TGG | + | tig0026810:32720-32739 | Msa1431190:CDS | 50.0% | |
| ACGAAGTTCGGTAGCAAACC+AGG | - | tig0026810:32741-32760 | None:intergenic | 50.0% | |
| ! | GTTTGCTACCGAACTTCGTC+AGG | + | tig0026810:32742-32761 | Msa1431190:CDS | 50.0% |
| AGAAGATCCGGTCACAGGAT+TGG | - | tig0026810:32782-32801 | None:intergenic | 50.0% | |
| ! | TCTGAGGCGAAATTCAACGG+AGG | - | tig0026810:32814-32833 | None:intergenic | 50.0% |
| TGGGAAGACGAGAATGCTCT+TGG | + | tig0026810:32964-32983 | Msa1431190:CDS | 50.0% | |
| GGGAAGACGAGAATGCTCTT+GGG | + | tig0026810:32965-32984 | Msa1431190:CDS | 50.0% | |
| AAGACGAGAATGCTCTTGGG+AGG | + | tig0026810:32968-32987 | Msa1431190:CDS | 50.0% | |
| GTGTACTTTCTGAGCAAGGC+TGG | + | tig0026810:33039-33058 | Msa1431190:CDS | 50.0% | |
| TCTGAGCAAGGCTGGAAATG+TGG | + | tig0026810:33047-33066 | Msa1431190:CDS | 50.0% | |
| ATTGCAAGCTACAACGGTCC+CGG | - | tig0026810:33166-33185 | None:intergenic | 50.0% | |
| TCTCCACACCCTAAGACTTG+TGG | - | tig0026810:33310-33329 | None:intergenic | 50.0% | |
| !! | AATCTGTTGCCAGCATCGGT+TGG | - | tig0026810:33343-33362 | None:intergenic | 50.0% |
| CTGCAATCTGTTGCCAGCAT+CGG | - | tig0026810:33347-33366 | None:intergenic | 50.0% | |
| !! | ATTGTGTTGGTGCCGGTTCT+CGG | + | tig0026810:33418-33437 | Msa1431190:CDS | 50.0% |
| AATGCCCTAGCCGGATATCT+TGG | + | tig0026810:33606-33625 | Msa1431190:three_prime_UTR | 50.0% | |
| CTTGCTCACACATCCCCACA+AGG | + | tig0026810:32569-32588 | Msa1431190:CDS | 55.0% | |
| ACATCCCCACAAGGGATCCT+TGG | + | tig0026810:32578-32597 | Msa1431190:CDS | 55.0% | |
| TCGGTAGAAGATCCGGTCAC+AGG | - | tig0026810:32787-32806 | None:intergenic | 55.0% | |
| CGAGAATGCTCTTGGGAGGA+AGG | + | tig0026810:32972-32991 | Msa1431190:CDS | 55.0% | |
| TCGATGAGACCAACCGATGC+TGG | + | tig0026810:33331-33350 | Msa1431190:CDS | 55.0% | |
| TGACGGTGAAATGCCCTAGC+CGG | + | tig0026810:33597-33616 | Msa1431190:exon | 55.0% | |
| CTTGCTCACACATCCCCACA+AGG | + | tig0026810:32569-32588 | Msa1431190:CDS | 55.0% | |
| ACATCCCCACAAGGGATCCT+TGG | + | tig0026810:32578-32597 | Msa1431190:CDS | 55.0% | |
| TCGGTAGAAGATCCGGTCAC+AGG | - | tig0026810:32787-32806 | None:intergenic | 55.0% | |
| CGAGAATGCTCTTGGGAGGA+AGG | + | tig0026810:32972-32991 | Msa1431190:CDS | 55.0% | |
| TCGATGAGACCAACCGATGC+TGG | + | tig0026810:33331-33350 | Msa1431190:CDS | 55.0% | |
| TGACGGTGAAATGCCCTAGC+CGG | + | tig0026810:33597-33616 | Msa1431190:exon | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026810 | gene | 31927 | 33852 | 31927 | ID=Msa1431190;Name=Msa1431190 |
| tig0026810 | mRNA | 31927 | 33852 | 31927 | ID=Msa1431190-mRNA-1;Parent=Msa1431190;Name=Msa1431190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0.33|0.33|1|1|3|253|415 |
| tig0026810 | exon | 31927 | 31930 | 31927 | ID=Msa1431190-mRNA-1:exon:7426;Parent=Msa1431190-mRNA-1 |
| tig0026810 | exon | 32054 | 32061 | 32054 | ID=Msa1431190-mRNA-1:exon:7427;Parent=Msa1431190-mRNA-1 |
| tig0026810 | exon | 32364 | 33852 | 32364 | ID=Msa1431190-mRNA-1:exon:7428;Parent=Msa1431190-mRNA-1 |
| tig0026810 | CDS | 31927 | 31930 | 31927 | ID=Msa1431190-mRNA-1:cds;Parent=Msa1431190-mRNA-1 |
| tig0026810 | CDS | 32054 | 32061 | 32054 | ID=Msa1431190-mRNA-1:cds;Parent=Msa1431190-mRNA-1 |
| tig0026810 | CDS | 32364 | 33599 | 32364 | ID=Msa1431190-mRNA-1:cds;Parent=Msa1431190-mRNA-1 |
| tig0026810 | three_prime_UTR | 33600 | 33852 | 33600 | ID=Msa1431190-mRNA-1:three_prime_utr;Parent=Msa1431190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
